Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0004420

Physical Location & Seq

Genomic Coordinates Forward (+)

13963211 .. 13970925

Gene Structure 7715 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G156900.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1320 bp

ATGAATCAACCAAAAATCAAGCGTCGAGTGGGTAAATATGAGGTGGGAAGGACAATTGGTGAGGGAACATTTGCAAAAGTGAAGTTTGCTAGAAATTCTGATACTGGGGAACCTGTAGCTCTCAAGATTATTGACAAAGAGAAGGTTCTCAAACACAAGATGGCTGAACAGATTAAACGGGAAATAGCAACAATGAAGCTGATTAAGCATCCAAATGTTGTTCGGTTATTTGAGGTAATGGGGAGTAAGACAAAGATATTTATAGTTATGGAGTTCGTTACCGGTGGGGAGCTCTTTGACAAAATTGTAAACAATGGACGGATGAGAGAAGATGAAGCACGGAGATACTTCCAACAGCTTATTAATGCTGTTGATTACTGCCATAGCAGAGGTGTCTATCATAGAGATCTGAAGCCAGAAAATTTGCTATTGGATACATATGGGAACCTTAAGGTTTCAGATTTTGGATTGAGTGCACTGTCCCAACAAGTCAGGGATGACGGCTTGCTTCACACTACATGTGGAACTCCAAATTATGTTGCTCCTGAGGTCCTTAATGATAGAGGCTATGATGGGGCAACTGCGGACATGTGGTCATGTGGAGTGATACTCTTTGTATTGCTTGCAGGTTACTTGCCTTTTGATGATTCTAATCTTATGACCCTGTATAAAAAAATCTCAGCAGCTGAATTCACTTGCCCCCCTTGGCTCTCTTTTGGTGCCATGAAGTTAATAGCTCGAATTTTGGATCCCAATCCTATGACTCGTATCACTATTGCTGAAATTCTTGAAGATGAATGGTTCAAGAAGGATTACAAGTCACTTGTGTTTGAGGAGAAAGAAGATACAAACTTGGATGATGTAGAAGCTGTTTTTAAGGATTCAGAAGAGCACCATGTGACAGAAAAGAAGGAAGAACAACCAGCAGCTATGAATGCATTTGAGTTAATTTCAATGTCGAAGGGGCTTAACCTGGGGAATTTGTTTGATGTAGAACAGGAATTTAAGAGAGAAACAAGGTTCACATCCAAATGCCCTGCCAATGAGATAATTCATAAAATTGAAGAAGCTGCAAAGCCTCTTGGTTTTGACGTACATAAAAAAAACTACAAGCTGAGGCTTGAAAACATGAAAGCTGGAAGAAAGGGAAACCTTAATGTTGCCACAGAGGTATTTCAAGTGGCACCTTCTCTTCACATGGTTGAGGTGCGAAAAGCCAAAGGGGACACCTTGGAGTTCCACAAGTTCTATAAGAACCTCTCTACATGCCTGGAGGATGTTGTTTGGAAGACCGAGGAGGATATGCAAAAAGTGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04068 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

NAF Pkinase

Protein Analysis

440

Amino Acids

50.28

Weight (kDa)

6.85

Isoelectric Point (pI)

31.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004420)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26980 AT2G26980 AT2G26980 AT2G26980 AT5G21326
fragaria_vesca	FvH4_3g27610 FvH4_3g27610 FvH4_3g27610 FvH4_3g27610 FvH4_3g27610 FvH4_3g27610 FvH4_3g27610 FvH4_3g27610
malus_domestica	MD03G1163600.v1.1
prunus_persica	Prupe.6G156900_v2.0.a1 Prupe.6G156900_v2.0.a1 Prupe.6G156900_v2.0.a1 Prupe.6G156900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0050061
rosa_laevigata	RLG00000034683
rosa_multiflora	Rmu_sc0000333.1_g000007
rosa_roxburghii	Rroxscaffold_1G00031070
rosa_rugosa	Rorug05G0257000 Rorug05G0257100 Rorug05G0257200.1 Rorug05G0257300 Rorug05G0257400
rosa_samantha	Rh5AG330200 Rh5BG340900 Rh5CG367500 Rh5DG353700
rosa_wichuraiana	Rw5G031160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	617
AccB1I	GGYRCC	2 cut(s)	719, 1183
AciI	CCGC	1 cut(s)	584
AclWI	GGATC	2 cut(s)	743, 756
AcsI	RAATTY	7 cut(s)	94, 421, 689, 741, 783, 979, 1001
AcuI	CTGAAG	1 cut(s)	431
AdeI	CACNNNGTG	1 cut(s)	898
AfaI	GTAC	1 cut(s)	1095
AflII	CTTAAG	1 cut(s)	449
AflIII	ACRYGT	2 cut(s)	518, 588
AgeI	ACCGGT	1 cut(s)	281
AgsI	TTSAA	6 cut(s)	791, 805, 954, 1064, 1124, 1178
AhdI	GACNNNNNGTC	1 cut(s)	592
AjnI	CCWGG	2 cut(s)	972, 1269
Alw21I	GWGCWC	3 cut(s)	294, 478, 894
Alw44I	GTGCAC	1 cut(s)	474
AlwI	GGATC	2 cut(s)	743, 756
AlwNI	CAGNNNCTG	1 cut(s)	686
ApaLI	GTGCAC	1 cut(s)	474
ApeKI	GCWGC	3 cut(s)	683, 926, 1070
ApoI	RAATTY	7 cut(s)	94, 421, 689, 741, 783, 979, 1001
AseI	ATTAAT	1 cut(s)	363
AsiGI	ACCGGT	1 cut(s)	281
AspS9I	GGNCC	1 cut(s)	550
AsuHPI	GGTGA	1 cut(s)	71
AvaII	GGWCC	1 cut(s)	550
AxyI	CCTNAGG	1 cut(s)	546
BaeGI	GKGCMC	1 cut(s)	478
BamHI	GGATCC	1 cut(s)	748
BanI	GGYRCC	2 cut(s)	719, 1183
BanII	GRGCYC	1 cut(s)	294
BbsI	GAAGAC	1 cut(s)	1295
Bbv12I	GWGCWC	3 cut(s)	294, 478, 894
BbvCI	CCTCAGC	1 cut(s)	1115
BbvI	GCAGC	3 cut(s)	695, 938, 1057
BccI	CCATC	2 cut(s)	154, 566
BceAI	ACGGC	1 cut(s)	517
BciT130I	CCWGG	2 cut(s)	974, 1271
BciVI	GTATCC	1 cut(s)	427
BfaI	CTAG	1 cut(s)	90
BfmI	CTRYAG	1 cut(s)	114
BfrI	CTTAAG	1 cut(s)	449
BfuAI	ACCTGC	1 cut(s)	617
BfuI	GTATCC	1 cut(s)	427
BglII	AGATCT	1 cut(s)	406
BisI	GCNGC	3 cut(s)	684, 927, 1071
BlsI	GCNGC	3 cut(s)	685, 928, 1072
Bme1390I	CCNGG	2 cut(s)	974, 1271
Bme18I	GGWCC	1 cut(s)	550
BmeRI	GACNNNNNGTC	1 cut(s)	592
BmgT120I	GGNCC	1 cut(s)	550
BmiI	GGNNCC	5 cut(s)	111, 446, 721, 750, 1185
BmrFI	CCNGG	2 cut(s)	974, 1271
BmrI	ACTGGG	1 cut(s)	114
BmsI	GCATC	1 cut(s)	217
BmuI	ACTGGG	1 cut(s)	114
BpiI	GAAGAC	1 cut(s)	1295
BplI	GAGNNNNNCTC	2 cut(s)	594, 626
BpmI	CTGGAG	1 cut(s)	1292
Bpu10I	CCTNAGC	1 cut(s)	1115
BpuEI	CTTGAG	1 cut(s)	107
BsaBI	GATNNNNATC	2 cut(s)	651, 753
BsaJI	CCNNGG	4 cut(s)	704, 973, 1230, 1293
BsaWI	WCCGGW	1 cut(s)	281
Bse118I	RCCGGY	1 cut(s)	281
Bse1I	ACTGG	1 cut(s)	109
Bse21I	CCTNAGG	1 cut(s)	546
Bse8I	GATNNNNATC	2 cut(s)	651, 753
BseBI	CCWGG	2 cut(s)	974, 1271
BseDI	CCNNGG	4 cut(s)	704, 973, 1230, 1293
BseGI	GGATG	6 cut(s)	208, 327, 502, 862, 1025, 1282
BseJI	GATNNNNATC	2 cut(s)	651, 753
BseMII	CTCAG	3 cut(s)	537, 693, 1106
BseNI	ACTGG	1 cut(s)	109
BseRI	GAGGAG	2 cut(s)	848, 1310
BseSI	GKGCMC	1 cut(s)	478
BseXI	GCAGC	3 cut(s)	695, 938, 1057
BshNI	GGYRCC	2 cut(s)	719, 1183
BshTI	ACCGGT	1 cut(s)	281
BsiHKAI	GWGCWC	3 cut(s)	294, 478, 894
BsiSI	CCGG	1 cut(s)	282
BslFI	GGGAC	2 cut(s)	466, 1238
BsmFI	GGGAC	2 cut(s)	466, 1238
BsmI	GAATGC	1 cut(s)	940
Bsp1286I	GDGCHC	3 cut(s)	294, 478, 894
Bsp143I	GATC	2 cut(s)	406, 748
BspACI	CCGC	1 cut(s)	584
BspCNI	CTCAG	3 cut(s)	538, 692, 1107
BspLI	GGNNCC	5 cut(s)	111, 446, 721, 750, 1185
BspMI	ACCTGC	1 cut(s)	617
BspPI	GGATC	2 cut(s)	743, 756
BspQI	GCTCTTC	1 cut(s)	882
BspT107I	GGYRCC	2 cut(s)	719, 1183
BspTI	CTTAAG	1 cut(s)	449
BsrFI	RCCGGY	1 cut(s)	281
BsrI	ACTGG	1 cut(s)	109
BssAI	RCCGGY	1 cut(s)	281
BssECI	CCNNGG	4 cut(s)	704, 973, 1230, 1293
BssMI	GATC	2 cut(s)	406, 748
BssT1I	CCWWGG	2 cut(s)	704, 1230
Bst2UI	CCWGG	2 cut(s)	974, 1271
Bst4CI	ACNGT	1 cut(s)	480
Bst6I	CTCTTC	2 cut(s)	882, 1197
BstAFI	CTTAAG	1 cut(s)	449
BstC8I	GCNNGC	2 cut(s)	506, 624
BstDEI	CTNAG	3 cut(s)	546, 679, 1115
BstF5I	GGATG	6 cut(s)	208, 327, 502, 862, 1025, 1282
BstKTI	GATC	2 cut(s)	409, 751
BstMBI	GATC	2 cut(s)	406, 748
BstMWI	GCNNNNNNNGC	2 cut(s)	205, 935
BstNI	CCWGG	2 cut(s)	974, 1271
BstNSI	RCATGY	3 cut(s)	522, 592, 1269
BstSCI	CCNGG	2 cut(s)	972, 1269
BstSFI	CTRYAG	1 cut(s)	114
BstSLI	GKGCMC	1 cut(s)	478
BstV1I	GCAGC	3 cut(s)	695, 938, 1057
BstV2I	GAAGAC	1 cut(s)	1295
BstX2I	RGATCY	2 cut(s)	406, 748
BstYI	RGATCY	2 cut(s)	406, 748
Bsu36I	CCTNAGG	1 cut(s)	546
BsuI	GTATCC	1 cut(s)	427
BtsCI	GGATG	6 cut(s)	208, 327, 502, 862, 1025, 1282
BtsIMutI	CAGTG	1 cut(s)	476
BveI	ACCTGC	1 cut(s)	617
Cac8I	GCNNGC	2 cut(s)	506, 624
CaiI	CAGNNNCTG	1 cut(s)	686
Cfr10I	RCCGGY	1 cut(s)	281
Cfr13I	GGNCC	1 cut(s)	550
CseI	GACGC	1 cut(s)	11
Csp6I	GTAC	1 cut(s)	1094
CspAI	ACCGGT	1 cut(s)	281
CviAII	CATG	8 cut(s)	519, 589, 597, 724, 896, 1129, 1198, 1266
CviQI	GTAC	1 cut(s)	1094
DdeI	CTNAG	3 cut(s)	546, 679, 1115
DpnI	GATC	2 cut(s)	408, 750
DpnII	GATC	2 cut(s)	406, 748
DraIII	CACNNNGTG	1 cut(s)	898
DriI	GACNNNNNGTC	1 cut(s)	592
Eam1104I	CTCTTC	2 cut(s)	882, 1197
Eam1105I	GACNNNNNGTC	1 cut(s)	592
EarI	CTCTTC	2 cut(s)	882, 1197
Ecl136II	GAGCTC	1 cut(s)	292
Eco130I	CCWWGG	2 cut(s)	704, 1230
Eco24I	GRGCYC	1 cut(s)	294
Eco47I	GGWCC	1 cut(s)	550
Eco53kI	GAGCTC	1 cut(s)	292
Eco57I	CTGAAG	1 cut(s)	431
Eco81I	CCTNAGG	1 cut(s)	546
EcoICRI	GAGCTC	1 cut(s)	292
EcoO109I	RGGNCCY	1 cut(s)	550
EcoRI	GAATTC	1 cut(s)	689
EcoRII	CCWGG	2 cut(s)	972, 1269
EcoT14I	CCWWGG	2 cut(s)	704, 1230
EcoT22I	ATGCAT	1 cut(s)	940
EcoT38I	GRGCYC	1 cut(s)	294
ErhI	CCWWGG	2 cut(s)	704, 1230
FaeI	CATG	8 cut(s)	522, 592, 600, 727, 899, 1132, 1201, 1269
FaqI	GGGAC	2 cut(s)	466, 1238
FatI	CATG	8 cut(s)	518, 588, 596, 723, 895, 1128, 1197, 1265
FauNDI	CATATG	1 cut(s)	439
Fnu4HI	GCNGC	3 cut(s)	684, 927, 1071
FokI	GGATG	6 cut(s)	195, 334, 509, 869, 1012, 1289
FriOI	GRGCYC	1 cut(s)	294
Fsp4HI	GCNGC	3 cut(s)	684, 927, 1071
FspBI	CTAG	1 cut(s)	90
GluI	GCNGC	3 cut(s)	684, 927, 1071
GsuI	CTGGAG	1 cut(s)	1292
HapII	CCGG	1 cut(s)	282
HgaI	GACGC	1 cut(s)	11
Hin1II	CATG	8 cut(s)	522, 592, 600, 727, 899, 1132, 1201, 1269
HinfI	GANTC	4 cut(s)	4, 647, 763, 881
HpaII	CCGG	1 cut(s)	282
HphI	GGTGA	1 cut(s)	71
Hpy166II	GTNNAC	3 cut(s)	310, 476, 1023
Hpy188I	TCNGA	4 cut(s)	100, 411, 460, 886
Hpy188III	TCNNGA	4 cut(s)	124, 545, 788, 805
Hpy8I	GTNNAC	3 cut(s)	310, 476, 1023
Hpy99I	CGWCG	1 cut(s)	27
HpyAV	CCTTC	6 cut(s)	42, 136, 802, 904, 955, 1197
HpyCH4III	ACNGT	1 cut(s)	480
HpyCH4IV	ACGT	1 cut(s)	1092
HpyCH4V	TGCA	6 cut(s)	74, 476, 626, 938, 1073, 1306
HpyF10VI	GCNNNNNNNGC	2 cut(s)	205, 935
HpyF3I	CTNAG	3 cut(s)	546, 679, 1115
HpySE526I	ACGT	1 cut(s)	1092
Hsp92II	CATG	8 cut(s)	522, 592, 600, 727, 899, 1132, 1201, 1269
Kzo9I	GATC	2 cut(s)	406, 748
LguI	GCTCTTC	1 cut(s)	882
LmnI	GCTCC	2 cut(s)	289, 547
Lsp1109I	GCAGC	3 cut(s)	695, 938, 1057
LweI	GCATC	1 cut(s)	217
MaeI	CTAG	1 cut(s)	90
MaeII	ACGT	1 cut(s)	1092
MaeIII	GTNAC	4 cut(s)	277, 629, 819, 898
MalI	GATC	2 cut(s)	408, 750
MboI	GATC	2 cut(s)	406, 748
MboII	GAAGA	9 cut(s)	341, 803, 854, 899, 926, 1076, 1152, 1184, 1300
MfeI	CAATTG	1 cut(s)	54
MflI	RGATCY	2 cut(s)	406, 748
MhlI	GDGCHC	3 cut(s)	294, 478, 894
MlyI	GAGTC	1 cut(s)	757
MmeI	TCCRAC	1 cut(s)	376
Mph1103I	ATGCAT	1 cut(s)	940
MslI	CAYNNNNRTG	2 cut(s)	213, 1030
MspA1I	CMGCKG	1 cut(s)	686
MspCI	CTTAAG	1 cut(s)	449
MspI	CCGG	1 cut(s)	282
MspR9I	CCNGG	2 cut(s)	974, 1271
MunI	CAATTG	1 cut(s)	54
Mva1269I	GAATGC	1 cut(s)	940
MvaI	CCWGG	2 cut(s)	974, 1271
MwoI	GCNNNNNNNGC	2 cut(s)	205, 935
NdeI	CATATG	1 cut(s)	439
NdeII	GATC	2 cut(s)	406, 748
NlaIII	CATG	8 cut(s)	522, 592, 600, 727, 899, 1132, 1201, 1269
NlaIV	GGNNCC	5 cut(s)	111, 446, 721, 750, 1185
NmuCI	GTSAC	2 cut(s)	819, 898
NsiI	ATGCAT	1 cut(s)	940
NspI	RCATGY	3 cut(s)	522, 592, 1269
PciI	ACATGT	2 cut(s)	518, 588
PciSI	GCTCTTC	1 cut(s)	882
PctI	GAATGC	1 cut(s)	940
PfeI	GAWTC	3 cut(s)	4, 647, 881
PinAI	ACCGGT	1 cut(s)	281
PkrI	GCNGC	3 cut(s)	685, 928, 1072
PleI	GAGTC	1 cut(s)	757
PpsI	GAGTC	1 cut(s)	757
PpuMI	RGGWCCY	1 cut(s)	550
PscI	ACATGT	2 cut(s)	518, 588
PshBI	ATTAAT	1 cut(s)	363
Psp124BI	GAGCTC	1 cut(s)	294
Psp5II	RGGWCCY	1 cut(s)	550
Psp6I	CCWGG	2 cut(s)	972, 1269
PspGI	CCWGG	2 cut(s)	972, 1269
PspN4I	GGNNCC	5 cut(s)	111, 446, 721, 750, 1185
PspPI	GGNCC	1 cut(s)	550
PspPPI	RGGWCCY	1 cut(s)	550
PstNI	CAGNNNCTG	1 cut(s)	686
PsuI	RGATCY	2 cut(s)	406, 748
PvuII	CAGCTG	1 cut(s)	686
RsaI	GTAC	1 cut(s)	1095
RsaNI	GTAC	1 cut(s)	1094
RseI	CAYNNNNRTG	2 cut(s)	213, 1030
SacI	GAGCTC	1 cut(s)	294
SapI	GCTCTTC	1 cut(s)	882
SatI	GCNGC	3 cut(s)	684, 927, 1071
Sau3AI	GATC	2 cut(s)	406, 748
Sau96I	GGNCC	1 cut(s)	550
SchI	GAGTC	1 cut(s)	757
ScrFI	CCNGG	2 cut(s)	974, 1271
SduI	GDGCHC	3 cut(s)	294, 478, 894
SfaNI	GCATC	1 cut(s)	217
SfcI	CTRYAG	1 cut(s)	114
SinI	GGWCC	1 cut(s)	550
SmiMI	CAYNNNNRTG	2 cut(s)	213, 1030
SmlI	CTYRAG	2 cut(s)	122, 449
SmoI	CTYRAG	2 cut(s)	122, 449
SsiI	CCGC	1 cut(s)	584
SspMI	CTAG	1 cut(s)	90
SstI	GAGCTC	1 cut(s)	294
StyD4I	CCNGG	2 cut(s)	972, 1269
StyI	CCWWGG	2 cut(s)	704, 1230
TaaI	ACNGT	1 cut(s)	480
TaiI	ACGT	1 cut(s)	1095
TaqI	TCGA	3 cut(s)	25, 739, 959
TaqII	GACCGA	1 cut(s)	1307
TfiI	GAWTC	3 cut(s)	4, 647, 881
TscAI	CASTG	1 cut(s)	483
TseFI	GTSAC	2 cut(s)	819, 898
TseI	GCWGC	3 cut(s)	683, 926, 1070
Tsp45I	GTSAC	2 cut(s)	819, 898
TspDTI	ATGAA	8 cut(s)	17, 209, 348, 740, 810, 947, 1043, 1145
TspGWI	ACGGA	2 cut(s)	334, 355
TspRI	CASTG	1 cut(s)	483
Vha464I	CTTAAG	1 cut(s)	449
VneI	GTGCAC	1 cut(s)	474
VpaK11BI	GGWCC	1 cut(s)	550
VspI	ATTAAT	1 cut(s)	363
XapI	RAATTY	7 cut(s)	94, 421, 689, 741, 783, 979, 1001
XceI	RCATGY	3 cut(s)	522, 592, 1269
XspI	CTAG	1 cut(s)	90
Zsp2I	ATGCAT	1 cut(s)	940

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.