Rorug05G0257300

Non-specific serine threonine protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
28881864 .. 28884962
3099 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0257300.1

Sequence Viewer

Length: 1527 bp
ATGAGACTATGCATCGTCCTGTTTCTGATAACCAGACTCTTTACAAACTCTCAATCTCTTAGCAGGGCTGATTTCCCAGAAGGGTTTGTTTTCGGAACAGCTTCTTCGGCATACCAGTTCGAGGGAGCTGTAAATGAAGGAAACAAGGGAGATAGTGTATGGGATACTTTCACAAAAAAACCAGGGAAGATTTTAGATTTCAGCAATGCAGACACAGCGGTAGATCAATATCACAGATTTCAGAGTGATGTAGACTTGATGAAGGATATGGGAGTAAATGCATACAGATTCTCAATATCGTGGCCAAGAATTTTTCCAAATGGAACAGGAGCACCCAACTCAGAAGGAATAAGCTACTACAACAGCCTTATAGATTCTTTGCTTGCAAAAGGGATCCAGCCTTTTGTAACTCTATATCATTGGGATCTTCCGCAGATGCTTGAAGACAGATATGAAGGATGGTTGAGCACACAGATAGTAAAAGACTTTGAACATTATGCCTTCACCTGCTTCCAAGCGTTTGGAGACAGAGTTAAGCACTGGATCACCATCAACGAGCCTCATGGTTATGCACTCCAAAGTTATGACTTGGGAATACAAGCTCCCGGGCGATGTTCTATTCTCGGTCACTTGTTTTGTAAGAAAGGAAATTCATCCGTTGAACCATACATTGTTGCTCACAACATCCTCCTGTCTCATGCTGCAACTTATCATATGTACCAGAAATTTTTCAAGGAGAAACAAGTAGGTCAGGTTGGAATTGCACTGGATGCAAAATGGCATGAACCTCTATCGGAAAGTGATGAGGACATAGATGCAGCACATAGAGCGAATGAATTCACATTGGGATGGTTCCTTGATCCACTATTTTTTGGCGACTATCCTCTCTCAATGAAGAAGCTTGTGGGTAAGCGATTACCTGAGATTTCGCAGGAAGCATCAAAATTCTTGGTGGGATCTGTGGACTTTATCGGCATAAACCACTACACCACATTATATGCTCGGAATGACAGGACACGGATTCGAAAATTTATATTGCAGGATGCTACATCTGATGCTGCAGTCATTACAACACAATACAAAGGAGGAGTGGCGATTGGAGAAAAAGCAGCTTCTCGCTGGTTACGCATAGTCCCATGGGGCATCCGAAAGTTGGCAAGATACATCAAAGATAAGTACGGGAACCCCCCAGTGATGATAACAGAAAATGGTATGGATGATCCAAATAAACCTTTCATATCTATGGAAAAGGCTTTAAATGATGAGAAGAGGATACGATTTCACAGGGACTATCTCTCAAACCTATCAGCTGCTATAAGGGAAGACAAATGTGATGTTCGTGGTTATTTTGTGTGGTCATTACTTGACAACTGGGAATGGAACATGGGCTACACTGTCAGATTTGGGCTCTACTATGTCGATTACAAGAAGAACCTTACGAGGATTCCTAAATCTTCTGTTCAATGGTTTACAAGATTTCTCCAAGTTAACAATCATCAGAGTTTTGTGCAGACAAAGCACATGTAA

Protein Analysis

508

Amino Acids

58.5

Weight (kDa)

8.34

Isoelectric Point (pI)

28.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 23 - 497 5.4e-158 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 515
Acc36I ACCTGC 1 cut(s) 515
AccI GTMKAC 1 cut(s) 252
AciI CCGC 2 cut(s) 218, 431
AclWI GGATC 7 cut(s) 388, 401, 432, 551, 854, 964, 1214
AcoI YGGCCR 1 cut(s) 302
AcsI RAATTY 6 cut(s) 309, 649, 725, 836, 944, 1028
AfaI GTAC 2 cut(s) 719, 1178
AfiI CCNNNNNNNGG 2 cut(s) 121, 1153
AflIII ACRYGT 1 cut(s) 1521
AgsI TTSAA 5 cut(s) 443, 491, 662, 733, 1463
AjnI CCWGG 1 cut(s) 181
AluBI AGCT 7 cut(s) 101, 128, 354, 602, 901, 1112, 1310
AluI AGCT 7 cut(s) 101, 128, 354, 602, 901, 1112, 1310
Alw21I GWGCWC 2 cut(s) 334, 470
Alw26I GTCTC 2 cut(s) 519, 699
AlwI GGATC 7 cut(s) 388, 401, 432, 551, 854, 964, 1214
Ama87I CYCGRG 1 cut(s) 605
AoxI GGCC 1 cut(s) 302
ApeKI GCWGC 5 cut(s) 701, 818, 1058, 1109, 1310
ApoI RAATTY 6 cut(s) 309, 649, 725, 836, 944, 1028
Asp700I GAANNNNTTC 3 cut(s) 100, 728, 836
AsuC2I CCSGG 2 cut(s) 606, 607
AsuHPI GGTGA 2 cut(s) 496, 538
AsuII TTCGAA 1 cut(s) 1024
AvaI CYCGRG 1 cut(s) 605
BalI TGGCCA 1 cut(s) 304
BamHI GGATCC 1 cut(s) 393
BanII GRGCYC 1 cut(s) 1410
BbsI GAAGAC 2 cut(s) 450, 1329
Bbv12I GWGCWC 2 cut(s) 334, 470
BbvI GCAGC 5 cut(s) 688, 830, 1045, 1121, 1297
BccI CCATC 3 cut(s) 453, 557, 843
BciT130I CCWGG 1 cut(s) 183
BciVI GTATCC 2 cut(s) 157, 1266
BcnI CCSGG 2 cut(s) 606, 607
BcoDI GTCTC 2 cut(s) 519, 699
BfmI CTRYAG 1 cut(s) 1059
BfuAI ACCTGC 1 cut(s) 515
BfuI GTATCC 2 cut(s) 157, 1266
BisI GCNGC 5 cut(s) 702, 819, 1059, 1110, 1311
BlsI GCNGC 5 cut(s) 703, 820, 1060, 1111, 1312
Bme1390I CCNGG 3 cut(s) 183, 606, 607
BmeT110I CYCGRG 1 cut(s) 605
BmiI GGNNCC 3 cut(s) 395, 854, 1184
BmrFI CCNGG 3 cut(s) 183, 606, 607
BmrI ACTGGG 2 cut(s) 1184, 1381
BmsI GCATC 8 cut(s) 21, 426, 760, 805, 947, 1033, 1045, 1152
BmuI ACTGGG 2 cut(s) 1184, 1381
BpiI GAAGAC 2 cut(s) 450, 1329
Bpu14I TTCGAA 1 cut(s) 1024
BpuMI CCSGG 2 cut(s) 606, 607
BsaBI GATNNNNATC 2 cut(s) 228, 548
BsaJI CCNNGG 3 cut(s) 182, 605, 1136
BsaXI ACNNNNNCTCC 4 cut(s) 141, 171, 516, 546
Bsc4I CCNNNNNNNGG 2 cut(s) 121, 1153
Bse1I ACTGG 5 cut(s) 115, 545, 771, 1190, 1376
Bse3DI GCAATG 1 cut(s) 211
Bse8I GATNNNNATC 2 cut(s) 228, 548
BseBI CCWGG 1 cut(s) 183
BseDI CCNNGG 3 cut(s) 182, 605, 1136
BseGI GGATG 8 cut(s) 464, 653, 684, 775, 854, 1048, 1143, 1222
BseJI GATNNNNATC 2 cut(s) 228, 548
BseLI CCNNNNNNNGG 2 cut(s) 121, 1153
BseMI GCAATG 1 cut(s) 211
BseMII CTCAG 2 cut(s) 354, 912
BseNI ACTGG 5 cut(s) 115, 545, 771, 1190, 1376
BseRI GAGGAG 1 cut(s) 1101
BseXI GCAGC 5 cut(s) 688, 830, 1045, 1121, 1297
BshFI GGCC 1 cut(s) 304
BsiHKAI GWGCWC 2 cut(s) 334, 470
BsiHKCI CYCGRG 1 cut(s) 605
BsiSI CCGG 1 cut(s) 606
BslFI GGGAC 2 cut(s) 1118, 1301
BslI CCNNNNNNNGG 2 cut(s) 121, 1153
BsmAI GTCTC 2 cut(s) 519, 699
BsmFI GGGAC 2 cut(s) 1118, 1301
BsnI GGCC 1 cut(s) 304
BsoBI CYCGRG 1 cut(s) 605
Bsp119I TTCGAA 1 cut(s) 1024
Bsp1286I GDGCHC 3 cut(s) 334, 470, 1410
Bsp143I GATC 7 cut(s) 223, 393, 424, 543, 859, 956, 1219
Bsp19I CCATGG 1 cut(s) 1136
BspACI CCGC 2 cut(s) 218, 431
BspANI GGCC 1 cut(s) 304
BspCNI CTCAG 2 cut(s) 353, 913
BspLI GGNNCC 3 cut(s) 395, 854, 1184
BspMAI CTGCAG 1 cut(s) 1063
BspMI ACCTGC 1 cut(s) 515
BspPI GGATC 7 cut(s) 388, 401, 432, 551, 854, 964, 1214
BspT104I TTCGAA 1 cut(s) 1024
BsrDI GCAATG 1 cut(s) 211
BsrI ACTGG 5 cut(s) 115, 545, 771, 1190, 1376
BssECI CCNNGG 3 cut(s) 182, 605, 1136
BssMI GATC 7 cut(s) 223, 393, 424, 543, 859, 956, 1219
BssT1I CCWWGG 1 cut(s) 1136
Bst2UI CCWGG 1 cut(s) 183
Bst4CI ACNGT 1 cut(s) 1396
Bst6I CTCTTC 1 cut(s) 1262
BstAPI GCANNNNNTGC 1 cut(s) 770
BstBI TTCGAA 1 cut(s) 1024
BstC8I GCNNGC 1 cut(s) 384
BstDEI CTNAG 3 cut(s) 59, 340, 921
BstDSI CCRYGG 1 cut(s) 1136
BstF5I GGATG 8 cut(s) 464, 653, 684, 775, 854, 1048, 1143, 1222
BstKTI GATC 7 cut(s) 226, 396, 427, 546, 862, 959, 1222
BstMAI GTCTC 2 cut(s) 519, 699
BstMBI GATC 7 cut(s) 223, 393, 424, 543, 859, 956, 1219
BstMWI GCNNNNNNNGC 6 cut(s) 107, 215, 770, 827, 1125, 1516
BstNI CCWGG 1 cut(s) 183
BstNSI RCATGY 1 cut(s) 1525
BstSCI CCNGG 3 cut(s) 181, 604, 605
BstSFI CTRYAG 1 cut(s) 1059
BstV1I GCAGC 5 cut(s) 688, 830, 1045, 1121, 1297
BstV2I GAAGAC 2 cut(s) 450, 1329
BstX2I RGATCY 3 cut(s) 393, 424, 956
BstXI CCANNNNNNTGG 1 cut(s) 521
BstYI RGATCY 3 cut(s) 393, 424, 956
BsuI GTATCC 2 cut(s) 157, 1266
BsuRI GGCC 1 cut(s) 304
BtgI CCRYGG 1 cut(s) 1136
BtgZI GCGATG 1 cut(s) 625
BtsCI GGATG 8 cut(s) 464, 653, 684, 775, 854, 1048, 1143, 1222
BtsIMutI CAGTG 4 cut(s) 538, 764, 1197, 1392
BveI ACCTGC 1 cut(s) 515
Cac8I GCNNGC 1 cut(s) 384
Cfr9I CCCGGG 1 cut(s) 605
Csp6I GTAC 2 cut(s) 718, 1177
CviAII CATG 6 cut(s) 563, 698, 782, 1137, 1384, 1522
CviQI GTAC 2 cut(s) 718, 1177
DdeI CTNAG 3 cut(s) 59, 340, 921
DpnI GATC 7 cut(s) 225, 395, 426, 545, 861, 958, 1221
DpnII GATC 7 cut(s) 223, 393, 424, 543, 859, 956, 1219
DraI TTTAAA 1 cut(s) 1257
EaeI YGGCCR 1 cut(s) 302
Eam1104I CTCTTC 1 cut(s) 1262
EarI CTCTTC 1 cut(s) 1262
Eco130I CCWWGG 1 cut(s) 1136
Eco24I GRGCYC 1 cut(s) 1410
Eco88I CYCGRG 1 cut(s) 605
EcoRI GAATTC 1 cut(s) 836
EcoRII CCWGG 1 cut(s) 181
EcoT14I CCWWGG 1 cut(s) 1136
EcoT22I ATGCAT 2 cut(s) 14, 283
EcoT38I GRGCYC 1 cut(s) 1410
ErhI CCWWGG 1 cut(s) 1136
FaeI CATG 6 cut(s) 566, 701, 785, 1140, 1387, 1525
FaqI GGGAC 2 cut(s) 1118, 1301
FatI CATG 6 cut(s) 562, 697, 781, 1136, 1383, 1521
FauNDI CATATG 1 cut(s) 714
FblI GTMKAC 1 cut(s) 252
Fnu4HI GCNGC 5 cut(s) 702, 819, 1059, 1110, 1311
FokI GGATG 8 cut(s) 471, 640, 671, 782, 861, 1055, 1130, 1229
FriOI GRGCYC 1 cut(s) 1410
Fsp4HI GCNGC 5 cut(s) 702, 819, 1059, 1110, 1311
GluI GCNGC 5 cut(s) 702, 819, 1059, 1110, 1311
HaeIII GGCC 1 cut(s) 304
HapII CCGG 1 cut(s) 606
Hin1II CATG 6 cut(s) 566, 701, 785, 1140, 1387, 1525
HincII GTYRAC 1 cut(s) 1489
HindII GTYRAC 1 cut(s) 1489
HindIII AAGCTT 1 cut(s) 899
HinfI GANTC 5 cut(s) 36, 288, 374, 1021, 1444
HpaI GTTAAC 1 cut(s) 1489
HpaII CCGG 1 cut(s) 606
HphI GGTGA 2 cut(s) 496, 538
Hpy166II GTNNAC 4 cut(s) 253, 964, 1470, 1489
Hpy8I GTNNAC 4 cut(s) 253, 964, 1470, 1489
HpyAV CCTTC 6 cut(s) 74, 131, 256, 338, 449, 511
HpyCH4III ACNGT 1 cut(s) 1396
HpyF10VI GCNNNNNNNGC 6 cut(s) 107, 215, 770, 827, 1125, 1516
HpyF3I CTNAG 3 cut(s) 59, 340, 921
Hsp92II CATG 6 cut(s) 566, 701, 785, 1140, 1387, 1525
KspAI GTTAAC 1 cut(s) 1489
Kzo9I GATC 7 cut(s) 223, 393, 424, 543, 859, 956, 1219
LmnI GCTCC 3 cut(s) 125, 329, 607
Lsp1109I GCAGC 5 cut(s) 688, 830, 1045, 1121, 1297
LweI GCATC 8 cut(s) 21, 426, 760, 805, 947, 1033, 1045, 1152
MaeIII GTNAC 3 cut(s) 406, 626, 1122
MalI GATC 7 cut(s) 225, 395, 426, 545, 861, 958, 1221
MboI GATC 7 cut(s) 223, 393, 424, 543, 859, 956, 1219
MboII GAAGA 9 cut(s) 96, 199, 419, 455, 907, 1279, 1334, 1441, 1446
MflI RGATCY 3 cut(s) 393, 424, 956
MhlI GDGCHC 3 cut(s) 334, 470, 1410
MlsI TGGCCA 1 cut(s) 304
MluCI AATT 7 cut(s) 309, 649, 725, 759, 836, 944, 1028
MluNI TGGCCA 1 cut(s) 304
MlyI GAGTC 1 cut(s) 30
MmeI TCCRAC 1 cut(s) 736
MnlI CCTC 9 cut(s) 115, 570, 698, 798, 799, 894, 1079, 1263, 1434
Mox20I TGGCCA 1 cut(s) 304
Mph1103I ATGCAT 2 cut(s) 14, 283
MroXI GAANNNNTTC 3 cut(s) 100, 728, 836
MscI TGGCCA 1 cut(s) 304
MseI TTAA 3 cut(s) 534, 1256, 1488
MslI CAYNNNNRTG 3 cut(s) 567, 847, 1241
Msp20I TGGCCA 1 cut(s) 304
MspA1I CMGCKG 2 cut(s) 218, 1310
MspI CCGG 1 cut(s) 606
MspR9I CCNGG 3 cut(s) 183, 606, 607
MvaI CCWGG 1 cut(s) 183
MwoI GCNNNNNNNGC 6 cut(s) 107, 215, 770, 827, 1125, 1516
NciI CCSGG 2 cut(s) 606, 607
NcoI CCATGG 1 cut(s) 1136
NdeI CATATG 1 cut(s) 714
NdeII GATC 7 cut(s) 223, 393, 424, 543, 859, 956, 1219
NlaIII CATG 6 cut(s) 566, 701, 785, 1140, 1387, 1525
NlaIV GGNNCC 3 cut(s) 395, 854, 1184
NmuCI GTSAC 1 cut(s) 626
NsiI ATGCAT 2 cut(s) 14, 283
NspI RCATGY 1 cut(s) 1525
NspV TTCGAA 1 cut(s) 1024
PaqCI CACCTGC 1 cut(s) 515
PciI ACATGT 1 cut(s) 1521
PdmI GAANNNNTTC 3 cut(s) 100, 728, 836
PfeI GAWTC 4 cut(s) 288, 374, 1021, 1444
PkrI GCNGC 5 cut(s) 703, 820, 1060, 1111, 1312
PleI GAGTC 1 cut(s) 30
PpsI GAGTC 1 cut(s) 30
PscI ACATGT 1 cut(s) 1521
Psp6I CCWGG 1 cut(s) 181
PspGI CCWGG 1 cut(s) 181
PspN4I GGNNCC 3 cut(s) 395, 854, 1184
PsrI GAACNNNNNNTAC 2 cut(s) 1373, 1405
PstI CTGCAG 1 cut(s) 1063
PsuI RGATCY 3 cut(s) 393, 424, 956
PvuII CAGCTG 1 cut(s) 1310
RsaI GTAC 2 cut(s) 719, 1178
RsaNI GTAC 2 cut(s) 718, 1177
RseI CAYNNNNRTG 3 cut(s) 567, 847, 1241
SaqAI TTAA 3 cut(s) 534, 1256, 1488
SatI GCNGC 5 cut(s) 702, 819, 1059, 1110, 1311
Sau3AI GATC 7 cut(s) 223, 393, 424, 543, 859, 956, 1219
SchI GAGTC 1 cut(s) 30
ScrFI CCNGG 3 cut(s) 183, 606, 607
SduI GDGCHC 3 cut(s) 334, 470, 1410
SfaNI GCATC 8 cut(s) 21, 426, 760, 805, 947, 1033, 1045, 1152
SfcI CTRYAG 1 cut(s) 1059
SfuI TTCGAA 1 cut(s) 1024
SmaI CCCGGG 1 cut(s) 607
SmiMI CAYNNNNRTG 3 cut(s) 567, 847, 1241
Sse9I AATT 7 cut(s) 309, 649, 725, 759, 836, 944, 1028
SsiI CCGC 2 cut(s) 218, 431
StyD4I CCNGG 3 cut(s) 181, 604, 605
StyI CCWWGG 1 cut(s) 1136
TaaI ACNGT 1 cut(s) 1396
TaqI TCGA 3 cut(s) 120, 1024, 1419
TaqII GACCGA 1 cut(s) 614
TasI AATT 7 cut(s) 309, 649, 725, 759, 836, 944, 1028
TfiI GAWTC 4 cut(s) 288, 374, 1021, 1444
Tru1I TTAA 3 cut(s) 534, 1256, 1488
Tru9I TTAA 3 cut(s) 534, 1256, 1488
TscAI CASTG 4 cut(s) 545, 771, 1197, 1399
TseFI GTSAC 1 cut(s) 626
TseI GCWGC 5 cut(s) 701, 818, 1058, 1109, 1310
Tsp45I GTSAC 1 cut(s) 626
TspDTI ATGAA 8 cut(s) 150, 275, 468, 642, 798, 849, 908, 1225
TspGWI ACGGA 2 cut(s) 646, 1033
TspMI CCCGGG 1 cut(s) 605
TspRI CASTG 4 cut(s) 545, 771, 1197, 1399
XapI RAATTY 6 cut(s) 309, 649, 725, 836, 944, 1028
XceI RCATGY 1 cut(s) 1525
XmaI CCCGGG 1 cut(s) 605
XmiI GTMKAC 1 cut(s) 252
XmnI GAANNNNTTC 3 cut(s) 100, 728, 836
Zsp2I ATGCAT 2 cut(s) 14, 283
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.