Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0006301

Physical Location & Seq

Genomic Coordinates Reverse (-)

74089 .. 80400

Gene Structure 6312 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g00081.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2481 bp

ATGACTTGCGAAGTGGTGGCAATCGATGACCCAAACGGTCAAGATCTAGTGAAGAAGACCAAGAAGCGGAAGAGGGGCAGCAGCAAGAGCCCACAGGATTTAGGGGCTGAGGAGAAAGAGGCTAAGATTGAGTTGCTTCGCAAAGAGCTGGATGGGTTGTTTGGGTACTACAGGGAAGTGATGAGTCAGAGTTTAGGGTGCTTCGATTTGGAGCAAGAATGCGGTAACAACAAGGATCTGAAATCGGTGATTGGGGCTTTGATGGAAGAGAGTGGGCTGCCCTTGTCAAAGCTTGTTGACGAGGTCTTCCAGAAGGTCAAGAACGGATATGGGGATGTGACGTTGGCCACGGTCAAGAAGATTGTGCTCTTGGTTGGTCAGCGAGAAATGTACGGCGTCCCTAATGCTGATGCCGATGTCCTCGAGGACAATTCTGATTCCTGTCTTTGGTGCTGGGAGACAAGGGATGTAAAGTTGATGCCCGCTTCCGTGCGTGGAGTATTGAATATTAGGCGTACCTGTCGAAGAAAGATCAATGAAAGGATTACCGCTGTTTCTGCAATGATAATGGCATTACAAAAGCCGGAAAGTGATAAAAGCTACATTCATGACCTGATGAAGGCATCAGAAATGATCGATAAAGCTTCCTGTGAGGCAAAGATTCGCTCATTAATGGACCGCCTATCACTGAAAAATAGTGCAGATATGGTAAAAAAGGAAGCCAAAAGAGAAGAGAAACTGCAAATCAAACAAATGGAGCAAGATAAACGAGAAGCTGAGAAAGAGAAGCAAAGATTGGAACGTGAACGTCAAAAAGAAGAGATGCAAAATGAGAAGGATCAAAAGCGGCTGTTAGAGGAGTCGGAAAAACTTGAAAAGCGTCGGGAAAAAGAAGAGTCTGAAATAAGGAAACTACGGAGGAAGCAGCAAGAAGAGGGCGAAAAAGAACAAAGGCGCCGGGAGAAGGAAGAAGCTAAACTAAAAGATCAACTTTCCATAAAAAAGCAAGCTTCAATCATGGATCGTTTCCTTAAAAGAACCAAACCCAGCCCTGCGAGCCAGAATGATCAATTACCAACTAAAGGAACCGTATCTATTTCATCAAGTATGAAAGATGAAAACTTGTCTGACGCAGTTACTCAATCAATGGACCACACTCTTTCATCTAATGACAAATTCAGTGCCGAGGATATCCGCAGGTTACACTTGTCTACTTGGCGCAGTTTAGGTCATTCTATTCGTTCAAACAGAAACCAAAGTTGGGGAATACGTCGGAAGCCTAAGATTGAGCTATTTAAGGAACTCAAGCTTACAACCAGTAAAGGACTAGTTCATGGTGATGATAGCATGGAAAAACTTGTAGATAGATGGGGTGAATCTGTTAATTATGACAGATCATGTCATGTTCTGGCTGATGTTAAGAAGTTCAAATCAAGAAAGCAGTTGTTACAATTTGATAAGAGCCATAGACCTGCATTTTATGGTATATGGTCCAAGAAAAGTCATGTTGTTGGACCGTGTCATCCTCTAAGGAAAGACCCAGACTTGGATTATGATATTGATAGTGATGAGGACTGGGAAGAGGAGGATCCTGGTGAGAGCCTCTCTGATTGCGATAAAGAAGATGAGGGAGAAAGTTTAGAAGAGGGATGTTCAAAAGCTGATGATGAAGACGAAAGTGAAGATGGTTTCTTTGTACCAGATGGGTATCTCTCAGAAAATGAGGGAGTAGAAGTGGACAGGATGGAAACTGAAATCTCATGTGAGGAGACCAAATCACCCAGTTGTAAGCAAGATTCAGAGAGTGATAAATTTTCTTCTTTGTTTCGGCAGCAAAAGTATTTAGGAAATTTGACAGAACGTGCTCTTCAGAAAAATCAACCTTTAATCATATCAAATTTGATGCATGAGAAGGCATCTTTGTTAATAGCTCAAGATCTTAGTGGTACTCTTAAGATGGAACAGATGTGCTTGCAAGCTCTAAGTATGCATGTGTTTCCTGGTGACTCATTGGTGGAGATATCAGTTGATGGCATGCAAGAAGAAGACCCGGAGGTTTACATGTCAACTGGCAAGTGCAGTATTAAACCAAGCTCTGCTGTGGCTGTTATACCGGAATCAGATCTGCCTGCAATTGTGTCTGTCATTCAGTCATGCTCCCAAAGTATCAATAAGGTGTTACAAGCTTTGCAGCAGAAGTTCCCAGCTGCGTCAAAGACTCAGTTAAGGAATAAAGTGCGAGAGATATCAGATTTTGTGGATAACCATTGGCAGGTTAAGAGAGAAATTCTGGAGAAAGTTGGCTTGTCAATGTCTCCCGAAAAGAGCGCTGGACTGCCCAAAAGTATTACTGCCTTTTTCTCAAAAAGGTGCTTGCCACCCAATGGTAAAGGTATCAACCCAAATGAAACCTCACCTCAGCAAGCAGTGAAGCCCGGTTCTGCAGTTGAAGGGCAGCAAAGTTGCTTATACAGAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006338 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008283 GO:0009555 GO:0009888 GO:0009934 GO:0009987 GO:0010026 GO:0016043 GO:0022603 GO:0022607 GO:0030154 GO:0031497 GO:0031507 GO:0032501 GO:0032502 GO:0032991 GO:0033186 GO:0033554 GO:0034622 GO:0034641 GO:0034728 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0045787 GO:0046483 GO:0048229 GO:0048366 GO:0048367 GO:0048509 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051276 GO:0051716 GO:0051726 GO:0065003 GO:0065004 GO:0065007 GO:0070828 GO:0071103 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090558 GO:0099402 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CAF1A

Protein Analysis

827

Amino Acids

93.96

Weight (kDa)

5.8

Isoelectric Point (pI)

61.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CAF1A_dimeriz	PF12253	481 - 546	3.1e-19	Chromatin assembly factor 1 subunit A dimerization domain
Cac1_C	PF21796	709 - 759	1.4e-20	Chromatin assembly factor 1 subunit Cac1, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65470 AT1G65470
fragaria_vesca	FvH4_6g00081 FvH4_6g00081 FvH4_6g00081 FvH4_6g00081 FvH4_6g00081 FvH4_6g00081
malus_domestica	MD00G1017400.v1.1 MD12G1261700.v1.1
prunus_persica	Prupe.6G365000_v2.0.a1 Prupe.6G365000_v2.0.a1
pyrus_communis	pycom04g21970 pycom12g24210
rosa_chinensis	RchiOBHm_Chr3g0447421
rosa_laevigata	RLG00000026000
rosa_multiflora	Rmu_ssc0000473.1_g000021
rosa_roxburghii	Rroxscaffold_6G00425620
rosa_rugosa	Rorug02G0601300 Rorug02G0601400 Rorug02G0601500 Rorug02G0601600
rosa_samantha	Rh3AG001500 Rh3BG001200 Rh3CG001200 Rh3DG001400
rosa_wichuraiana	Rw3G000090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	422
Acc36I	ACCTGC	3 cut(s)	1188, 1480, 2263
AccB1I	GGYRCC	1 cut(s)	954
AccB7I	CCANNNNNTGG	1 cut(s)	2384
AccI	GTMKAC	1 cut(s)	1211
AciI	CCGC	7 cut(s)	67, 222, 483, 549, 679, 847, 1195
AclWI	GGATC	5 cut(s)	243, 846, 1029, 1583, 1596
AcoI	YGGCCR	1 cut(s)	345
AcsI	RAATTY	5 cut(s)	1175, 1811, 1849, 1897, 2286
AcuI	CTGAAG	1 cut(s)	1853
AcyI	GRCGYC	2 cut(s)	396, 955
AfaI	GTAC	5 cut(s)	167, 392, 517, 1698, 1948
AfeI	AGCGCT	1 cut(s)	2329
AfiI	CCNNNNNNNGG	9 cut(s)	66, 447, 619, 964, 1082, 1261, 1546, 2272, 2384
AflII	CTTAAG	1 cut(s)	1952
AflIII	ACRYGT	1 cut(s)	2061
AgsI	TTSAA	7 cut(s)	505, 875, 1014, 1245, 1429, 1656, 2450
AhlI	ACTAGT	1 cut(s)	1327
AjnI	CCWGG	2 cut(s)	1591, 1999
AjuI	GAANNNNNNNTTGG	4 cut(s)	779, 811, 1243, 1275
Alw21I	GWGCWC	2 cut(s)	369, 1867
Alw26I	GTCTC	3 cut(s)	452, 1763, 2319
AlwI	GGATC	5 cut(s)	243, 846, 1029, 1583, 1596
Ama87I	CYCGRG	1 cut(s)	422
Aor51HI	AGCGCT	1 cut(s)	2329
AoxI	GGCC	1 cut(s)	345
ApeKI	GCWGC	8 cut(s)	78, 81, 277, 925, 1831, 2191, 2207, 2455
ApoI	RAATTY	5 cut(s)	1175, 1811, 1849, 1897, 2286
AseI	ATTAAT	1 cut(s)	671
AspLEI	GCGC	3 cut(s)	957, 1221, 2330
AspS9I	GGNCC	4 cut(s)	676, 1150, 1491, 1514
AsuC2I	CCSGG	3 cut(s)	959, 2051, 2436
AsuHPI	GGTGA	7 cut(s)	259, 1349, 1385, 1607, 1770, 2015, 2406
AvaI	CYCGRG	1 cut(s)	422
AvaII	GGWCC	4 cut(s)	676, 1150, 1491, 1514
BalI	TGGCCA	1 cut(s)	347
BamHI	GGATCC	1 cut(s)	1588
BanI	GGYRCC	1 cut(s)	954
BanII	GRGCYC	1 cut(s)	92
BbsI	GAAGAC	4 cut(s)	62, 298, 1677, 2052
Bbv12I	GWGCWC	2 cut(s)	369, 1867
BbvCI	CCTCAGC	2 cut(s)	108, 2418
BbvI	GCAGC	8 cut(s)	90, 93, 264, 937, 1843, 2194, 2203, 2467
BccI	CCATC	8 cut(s)	146, 256, 1362, 1679, 1697, 1738, 1951, 2024
BceAI	ACGGC	1 cut(s)	409
BciT130I	CCWGG	2 cut(s)	1593, 2001
BclI	TGATCA	1 cut(s)	1066
BcnI	CCSGG	3 cut(s)	959, 2051, 2436
BcoDI	GTCTC	3 cut(s)	452, 1763, 2319
BcuI	ACTAGT	1 cut(s)	1327
BfaI	CTAG	2 cut(s)	47, 1328
BfmI	CTRYAG	2 cut(s)	169, 2442
BfoI	RGCGCY	2 cut(s)	958, 2331
BfrI	CTTAAG	1 cut(s)	1952
BfuAI	ACCTGC	3 cut(s)	1188, 1480, 2263
BglII	AGATCT	3 cut(s)	43, 1936, 2122
BisI	GCNGC	9 cut(s)	79, 82, 278, 848, 926, 1832, 2192, 2208, 2456
BlsI	GCNGC	9 cut(s)	80, 83, 279, 849, 927, 1833, 2193, 2209, 2457
Bme1390I	CCNGG	5 cut(s)	959, 1593, 2001, 2051, 2436
Bme18I	GGWCC	4 cut(s)	676, 1150, 1491, 1514
BmeT110I	CYCGRG	1 cut(s)	422
BmgT120I	GGNCC	4 cut(s)	676, 1150, 1491, 1514
BmiI	GGNNCC	3 cut(s)	956, 1087, 1590
BmrFI	CCNGG	5 cut(s)	959, 1593, 2001, 2051, 2436
BmrI	ACTGGG	2 cut(s)	1585, 1776
BmsI	GCATC	6 cut(s)	400, 468, 632, 813, 1893, 1925
BmuI	ACTGGG	2 cut(s)	1585, 1776
BpiI	GAAGAC	4 cut(s)	62, 298, 1677, 2052
BplI	GAGNNNNNCTC	2 cut(s)	1589, 1621
BpmI	CTGGAG	1 cut(s)	2312
Bpu10I	CCTNAGC	2 cut(s)	108, 2418
BpuEI	CTTGAG	2 cut(s)	1289, 1917
BpuMI	CCSGG	3 cut(s)	959, 2051, 2436
Bsa29I	ATCGAT	2 cut(s)	24, 636
BsaBI	GATNNNNATC	1 cut(s)	1707
BsaHI	GRCGYC	2 cut(s)	396, 955
BsaI	GGTCTC	1 cut(s)	1763
BsaJI	CCNNGG	2 cut(s)	348, 1185
BsaWI	WCCGGW	1 cut(s)	2113
BsaXI	ACNNNNNCTCC	2 cut(s)	1719, 1749
Bsc4I	CCNNNNNNNGG	9 cut(s)	66, 447, 619, 964, 1082, 1261, 1546, 2272, 2384
Bse1I	ACTGG	4 cut(s)	1317, 1580, 1782, 2074
Bse3DI	GCAATG	1 cut(s)	567
Bse8I	GATNNNNATC	1 cut(s)	1707
BseBI	CCWGG	2 cut(s)	1593, 2001
BseCI	ATCGAT	2 cut(s)	24, 636
BseDI	CCNNGG	2 cut(s)	348, 1185
BseGI	GGATG	6 cut(s)	157, 340, 472, 1522, 1655, 1749
BseJI	GATNNNNATC	1 cut(s)	1707
BseLI	CCNNNNNNNGG	9 cut(s)	66, 447, 619, 964, 1082, 1261, 1546, 2272, 2384
BseMI	GCAATG	1 cut(s)	567
BseMII	CTCAG	5 cut(s)	99, 768, 1728, 2234, 2432
BseNI	ACTGG	4 cut(s)	1317, 1580, 1782, 2074
BseRI	GAGGAG	4 cut(s)	125, 872, 1598, 1781
BseXI	GCAGC	8 cut(s)	90, 93, 264, 937, 1843, 2194, 2203, 2467
BseYI	CCCAGC	3 cut(s)	453, 1046, 2203
BsgI	GTGCAG	2 cut(s)	720, 2098
BshFI	GGCC	1 cut(s)	347
BshNI	GGYRCC	1 cut(s)	954
BshVI	ATCGAT	2 cut(s)	24, 636
BsiHKAI	GWGCWC	2 cut(s)	369, 1867
BsiHKCI	CYCGRG	1 cut(s)	422
BsiSI	CCGG	5 cut(s)	584, 958, 2051, 2114, 2436
BslFI	GGGAC	1 cut(s)	383
BslI	CCNNNNNNNGG	9 cut(s)	66, 447, 619, 964, 1082, 1261, 1546, 2272, 2384
BsmAI	GTCTC	3 cut(s)	452, 1763, 2319
BsmFI	GGGAC	1 cut(s)	383
BsmI	GAATGC	1 cut(s)	224
BsnI	GGCC	1 cut(s)	347
Bso31I	GGTCTC	1 cut(s)	1763
BsoBI	CYCGRG	1 cut(s)	422
Bsp1286I	GDGCHC	3 cut(s)	92, 369, 1867
BspACI	CCGC	7 cut(s)	67, 222, 483, 549, 679, 847, 1195
BspANI	GGCC	1 cut(s)	347
BspCNI	CTCAG	5 cut(s)	100, 769, 1727, 2233, 2431
BspDI	ATCGAT	2 cut(s)	24, 636
BspHI	TCATGA	1 cut(s)	607
BspLI	GGNNCC	3 cut(s)	956, 1087, 1590
BspMAI	CTGCAG	1 cut(s)	2446
BspMI	ACCTGC	3 cut(s)	1188, 1480, 2263
BspPI	GGATC	5 cut(s)	243, 846, 1029, 1583, 1596
BspQI	GCTCTTC	1 cut(s)	1872
BspT107I	GGYRCC	1 cut(s)	954
BspTI	CTTAAG	1 cut(s)	1952
BspTNI	GGTCTC	1 cut(s)	1763
BsrDI	GCAATG	1 cut(s)	567
BsrI	ACTGG	4 cut(s)	1317, 1580, 1782, 2074
BssECI	CCNNGG	2 cut(s)	348, 1185
BssNI	GRCGYC	2 cut(s)	396, 955
Bst2UI	CCWGG	2 cut(s)	1593, 2001
Bst4CI	ACNGT	4 cut(s)	38, 352, 1090, 1518
Bst6I	CTCTTC	9 cut(s)	65, 261, 726, 813, 888, 927, 1575, 1638, 1872
BstACI	GRCGYC	2 cut(s)	396, 955
BstAFI	CTTAAG	1 cut(s)	1952
BstC8I	GCNNGC	9 cut(s)	483, 1008, 1057, 1973, 1977, 2036, 2130, 2375, 2424
BstDSI	CCRYGG	1 cut(s)	348
BstENI	CCTNNNNNAGG	1 cut(s)	617
BstF5I	GGATG	6 cut(s)	157, 340, 472, 1522, 1655, 1749
BstH2I	RGCGCY	2 cut(s)	958, 2331
BstHHI	GCGC	3 cut(s)	957, 1221, 2330
BstMAI	GTCTC	3 cut(s)	452, 1763, 2319
BstMWI	GCNNNNNNNGC	3 cut(s)	87, 557, 1056
BstNI	CCWGG	2 cut(s)	1593, 2001
BstNSI	RCATGY	3 cut(s)	1994, 2038, 2065
BstSCI	CCNGG	5 cut(s)	957, 1591, 1999, 2049, 2434
BstSFI	CTRYAG	2 cut(s)	169, 2442
BstV1I	GCAGC	8 cut(s)	90, 93, 264, 937, 1843, 2194, 2203, 2467
BstV2I	GAAGAC	4 cut(s)	62, 298, 1677, 2052
BstX2I	RGATCY	5 cut(s)	43, 235, 1588, 1936, 2122
BstYI	RGATCY	5 cut(s)	43, 235, 1588, 1936, 2122
Bsu15I	ATCGAT	2 cut(s)	24, 636
BsuRI	GGCC	1 cut(s)	347
BsuTUI	ATCGAT	2 cut(s)	24, 636
BtgI	CCRYGG	1 cut(s)	348
BtsCI	GGATG	6 cut(s)	157, 340, 472, 1522, 1655, 1749
BtsI	GCAGTG	1 cut(s)	2433
BtsIMutI	CAGTG	3 cut(s)	686, 1186, 2433
BveI	ACCTGC	3 cut(s)	1188, 1480, 2263
Cac8I	GCNNGC	9 cut(s)	483, 1008, 1057, 1973, 1977, 2036, 2130, 2375, 2424
CciI	TCATGA	1 cut(s)	607
CfoI	GCGC	3 cut(s)	957, 1221, 2330
Cfr13I	GGNCC	4 cut(s)	676, 1150, 1491, 1514
ClaI	ATCGAT	2 cut(s)	24, 636
CseI	GACGC	4 cut(s)	385, 869, 1139, 2199
Csp6I	GTAC	5 cut(s)	166, 391, 516, 1697, 1947
CviQI	GTAC	5 cut(s)	166, 391, 516, 1697, 1947
DinI	GGCGCC	1 cut(s)	956
EaeI	YGGCCR	1 cut(s)	345
Eam1104I	CTCTTC	9 cut(s)	65, 261, 726, 813, 888, 927, 1575, 1638, 1872
EarI	CTCTTC	9 cut(s)	65, 261, 726, 813, 888, 927, 1575, 1638, 1872
Eco24I	GRGCYC	1 cut(s)	92
Eco31I	GGTCTC	1 cut(s)	1763
Eco32I	GATATC	3 cut(s)	1192, 2022, 2247
Eco47I	GGWCC	4 cut(s)	676, 1150, 1491, 1514
Eco47III	AGCGCT	1 cut(s)	2329
Eco57I	CTGAAG	1 cut(s)	1853
Eco88I	CYCGRG	1 cut(s)	422
EcoNI	CCTNNNNNAGG	1 cut(s)	617
EcoRII	CCWGG	2 cut(s)	1591, 1999
EcoRV	GATATC	3 cut(s)	1192, 2022, 2247
EcoT22I	ATGCAT	2 cut(s)	1908, 1992
EcoT38I	GRGCYC	1 cut(s)	92
EgeI	GGCGCC	1 cut(s)	956
EheI	GGCGCC	1 cut(s)	956
FalI	AAGNNNNNCTT	2 cut(s)	975, 1007
FaqI	GGGAC	1 cut(s)	383
FauI	CCCGC	1 cut(s)	490
FbaI	TGATCA	1 cut(s)	1066
FblI	GTMKAC	1 cut(s)	1211
Fnu4HI	GCNGC	9 cut(s)	79, 82, 278, 848, 926, 1832, 2192, 2208, 2456
FokI	GGATG	6 cut(s)	164, 347, 479, 1509, 1662, 1756
FriOI	GRGCYC	1 cut(s)	92
Fsp4HI	GCNGC	9 cut(s)	79, 82, 278, 848, 926, 1832, 2192, 2208, 2456
FspBI	CTAG	2 cut(s)	47, 1328
GlaI	GCGC	3 cut(s)	956, 1220, 2329
GluI	GCNGC	9 cut(s)	79, 82, 278, 848, 926, 1832, 2192, 2208, 2456
GsaI	CCCAGC	3 cut(s)	457, 1050, 2207
GsuI	CTGGAG	1 cut(s)	2312
HaeII	RGCGCY	2 cut(s)	958, 2331
HaeIII	GGCC	1 cut(s)	347
HapII	CCGG	5 cut(s)	584, 958, 2051, 2114, 2436
HgaI	GACGC	4 cut(s)	385, 869, 1139, 2199
HhaI	GCGC	3 cut(s)	957, 1221, 2330
Hin1I	GRCGYC	2 cut(s)	396, 955
Hin6I	GCGC	3 cut(s)	955, 1219, 2328
HinP1I	GCGC	3 cut(s)	955, 1219, 2328
HincII	GTYRAC	2 cut(s)	298, 2067
HindII	GTYRAC	2 cut(s)	298, 2067
HindIII	AAGCTT	5 cut(s)	290, 642, 1008, 1307, 2184
HpaII	CCGG	5 cut(s)	584, 958, 2051, 2114, 2436
HphI	GGTGA	7 cut(s)	259, 1349, 1385, 1607, 1770, 2015, 2406
Hpy166II	GTNNAC	6 cut(s)	298, 806, 1212, 1738, 2059, 2067
Hpy8I	GTNNAC	6 cut(s)	298, 806, 1212, 1738, 2059, 2067
Hpy99I	CGWCG	2 cut(s)	885, 1275
HpyAV	CCTTC	6 cut(s)	307, 613, 829, 958, 1906, 2444
HpyCH4III	ACNGT	4 cut(s)	38, 352, 1090, 1518
HpyCH4IV	ACGT	5 cut(s)	341, 802, 808, 1270, 1861
HpyF10VI	GCNNNNNNNGC	3 cut(s)	87, 557, 1056
HpySE526I	ACGT	5 cut(s)	341, 802, 808, 1270, 1861
Hsp92I	GRCGYC	2 cut(s)	396, 955
HspAI	GCGC	3 cut(s)	955, 1219, 2328
KasI	GGCGCC	1 cut(s)	954
Ksp22I	TGATCA	1 cut(s)	1066
LguI	GCTCTTC	1 cut(s)	1872
LmnI	GCTCC	3 cut(s)	211, 757, 2162
Lsp1109I	GCAGC	8 cut(s)	90, 93, 264, 937, 1843, 2194, 2203, 2467
LweI	GCATC	6 cut(s)	400, 468, 632, 813, 1893, 1925
MaeI	CTAG	2 cut(s)	47, 1328
MaeII	ACGT	5 cut(s)	341, 802, 808, 1270, 1861
MaeIII	GTNAC	7 cut(s)	224, 337, 1135, 1200, 1446, 2003, 2178
MfeI	CAATTG	1 cut(s)	2133
MflI	RGATCY	5 cut(s)	43, 235, 1588, 1936, 2122
MhlI	GDGCHC	3 cut(s)	92, 369, 1867
MlsI	TGGCCA	1 cut(s)	347
MluNI	TGGCCA	1 cut(s)	347
Mly113I	GGCGCC	1 cut(s)	955
MlyI	GAGTC	5 cut(s)	193, 869, 905, 2000, 2212
MmeI	TCCRAC	3 cut(s)	843, 1253, 1492
Mox20I	TGGCCA	1 cut(s)	347
Mph1103I	ATGCAT	2 cut(s)	1908, 1992
MscI	TGGCCA	1 cut(s)	347
MslI	CAYNNNNRTG	1 cut(s)	1338
Msp20I	TGGCCA	1 cut(s)	347
MspA1I	CMGCKG	2 cut(s)	551, 2207
MspCI	CTTAAG	1 cut(s)	1952
MspI	CCGG	5 cut(s)	584, 958, 2051, 2114, 2436
MspR9I	CCNGG	5 cut(s)	959, 1593, 2001, 2051, 2436
MunI	CAATTG	1 cut(s)	2133
Mva1269I	GAATGC	1 cut(s)	224
MvaI	CCWGG	2 cut(s)	1593, 2001
MwoI	GCNNNNNNNGC	3 cut(s)	87, 557, 1056
NarI	GGCGCC	1 cut(s)	955
NciI	CCSGG	3 cut(s)	959, 2051, 2436
NlaIV	GGNNCC	3 cut(s)	956, 1087, 1590
NmeAIII	GCCGAG	1 cut(s)	1210
NmuCI	GTSAC	2 cut(s)	337, 2003
NsiI	ATGCAT	2 cut(s)	1908, 1992
NspI	RCATGY	3 cut(s)	1994, 2038, 2065
PaeI	GCATGC	1 cut(s)	2038
PaeR7I	CTCGAG	1 cut(s)	422
PagI	TCATGA	1 cut(s)	607
PciI	ACATGT	1 cut(s)	2061
PciSI	GCTCTTC	1 cut(s)	1872
PctI	GAATGC	1 cut(s)	224
PfeI	GAWTC	5 cut(s)	437, 661, 1376, 1796, 2117
PflFI	GACNNNGTC	2 cut(s)	302, 1518
PflMI	CCANNNNNTGG	1 cut(s)	2384
PkrI	GCNGC	9 cut(s)	80, 83, 279, 849, 927, 1833, 2193, 2209, 2457
PleI	GAGTC	5 cut(s)	192, 868, 904, 2000, 2212
PluTI	GGCGCC	1 cut(s)	958
PpsI	GAGTC	5 cut(s)	192, 868, 904, 2000, 2212
PscI	ACATGT	1 cut(s)	2061
PshBI	ATTAAT	1 cut(s)	671
Psp6I	CCWGG	2 cut(s)	1591, 1999
PspFI	CCCAGC	3 cut(s)	453, 1046, 2203
PspGI	CCWGG	2 cut(s)	1591, 1999
PspN4I	GGNNCC	3 cut(s)	956, 1087, 1590
PspPI	GGNCC	4 cut(s)	676, 1150, 1491, 1514
PspXI	VCTCGAGB	1 cut(s)	422
PstI	CTGCAG	1 cut(s)	2446
PsuI	RGATCY	5 cut(s)	43, 235, 1588, 1936, 2122
PsyI	GACNNNGTC	2 cut(s)	302, 1518
PvuII	CAGCTG	1 cut(s)	2207
RsaI	GTAC	5 cut(s)	167, 392, 517, 1698, 1948
RsaNI	GTAC	5 cut(s)	166, 391, 516, 1697, 1947
RseI	CAYNNNNRTG	1 cut(s)	1338
SapI	GCTCTTC	1 cut(s)	1872
SatI	GCNGC	9 cut(s)	79, 82, 278, 848, 926, 1832, 2192, 2208, 2456
Sau96I	GGNCC	4 cut(s)	676, 1150, 1491, 1514
SchI	GAGTC	5 cut(s)	193, 869, 905, 2000, 2212
ScrFI	CCNGG	5 cut(s)	959, 1593, 2001, 2051, 2436
SduI	GDGCHC	3 cut(s)	92, 369, 1867
SfaNI	GCATC	6 cut(s)	400, 468, 632, 813, 1893, 1925
SfcI	CTRYAG	2 cut(s)	169, 2442
SfoI	GGCGCC	1 cut(s)	956
Sfr274I	CTCGAG	1 cut(s)	422
SinI	GGWCC	4 cut(s)	676, 1150, 1491, 1514
SlaI	CTCGAG	1 cut(s)	422
SmiMI	CAYNNNNRTG	1 cut(s)	1338
SmlI	CTYRAG	4 cut(s)	422, 1304, 1932, 1952
SmoI	CTYRAG	4 cut(s)	422, 1304, 1932, 1952
SpeI	ACTAGT	1 cut(s)	1327
SphI	GCATGC	1 cut(s)	2038
SsiI	CCGC	7 cut(s)	67, 222, 483, 549, 679, 847, 1195
SspDI	GGCGCC	1 cut(s)	954
SspI	AATATT	1 cut(s)	508
SspMI	CTAG	2 cut(s)	47, 1328
StyD4I	CCNGG	5 cut(s)	957, 1591, 1999, 2049, 2434
TaaI	ACNGT	4 cut(s)	38, 352, 1090, 1518
TaiI	ACGT	5 cut(s)	344, 805, 811, 1273, 1864
TaqI	TCGA	5 cut(s)	24, 204, 423, 523, 636
TauI	GCSGC	1 cut(s)	850
TfiI	GAWTC	5 cut(s)	437, 661, 1376, 1796, 2117
TscAI	CASTG	3 cut(s)	693, 1186, 2433
TseFI	GTSAC	2 cut(s)	337, 2003
TseI	GCWGC	8 cut(s)	78, 81, 277, 925, 1831, 2191, 2207, 2455
Tsp45I	GTSAC	2 cut(s)	337, 2003
TspGWI	ACGGA	3 cut(s)	339, 478, 931
TspRI	CASTG	3 cut(s)	693, 1186, 2433
Tth111I	GACNNNGTC	2 cut(s)	302, 1518
Van91I	CCANNNNNTGG	1 cut(s)	2384
Vha464I	CTTAAG	1 cut(s)	1952
VpaK11BI	GGWCC	4 cut(s)	676, 1150, 1491, 1514
VspI	ATTAAT	1 cut(s)	671
XagI	CCTNNNNNAGG	1 cut(s)	617
XapI	RAATTY	5 cut(s)	1175, 1811, 1849, 1897, 2286
XceI	RCATGY	3 cut(s)	1994, 2038, 2065
XhoI	CTCGAG	1 cut(s)	422
XmiI	GTMKAC	1 cut(s)	1211
XspI	CTAG	2 cut(s)	47, 1328
Zsp2I	ATGCAT	2 cut(s)	1908, 1992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.