Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0006301

Physical Location & Seq

Genomic Coordinates Forward (+)

30633569 .. 30641271

Gene Structure 7703 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G365000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2523 bp

ATGATGTGTGAAGTGGTAGCAATTGACGGCGGAGATAACCCAATTGGCCGGAAATCCAACGACCAAGATCGAGTGAGGAAGACCCAGAAGCGAAAGAGGGTTAGCTTCAGCCCAGAATGTTTGGGACTTGAGGCAAAAGAGGCTCAGATTGAATCTTTTCGCAAACAACTTGATGGGTTGTTTGGGTTCTACATGGAAGTGATGGGTCAGAGAGTCGATTTAGATGTGAAGCTATGTGGTAACAATATGAATTCGGTCATTGGGGCTTTGATCGAAGAGAGTGGGCTGCCATTGTCGAAGCTTGTTGAGGAGGTTTTCGAGAAGGTCAAGAACGGAAATGAGGCTTTTGGGAATGTGACTTTGGCCTGTGTGAAGAGCATTGTGCTCTTTGTTGGACAAAGAGTGATGTACGGTGTGCCGAATGTTGATGCTGATGTGTTGGAGGACGAGTCCGAGTCGTGTCTTTGGTGTTGGGAGACAAGGGATGTAAAGTTGATGCCAGCACCTGTGCGCGGAGTGTTGAATATTAGGCGCACTTGTCGAAGAAAGATCCATGAGAGGATTACTGCGGTTTCTGCAATGGCAATGGCATTACAAAAGCCAGAGAGCGATCAAAATTACATACATGACCTGATGAAGGCATCTGAACAGCTTGATAAAGCGCTGTGCGAGGCAAAGATCCGCTCATTAATGGATCGCTTATCAGTGAAAAATGGTGCAGACATGGCAAAGAAAGAGGCTAAAAGAGAAGAGAAATTATTAATCAAACAAATGGAGAGAGATAAACGAGTGTCTGAGAAAGAGAAAAAAAGATTGGAACGTGAACGTCAAAAGGAAGAATGGTTAAGTGAGAAGGAGCTAAAGCGGCTTCAAGGAGAGTCAGAAAAAGATGAAAAGCGTCGTGAAAAAGAAGAGTCTGAAATGAGGAAACTGCAGAGGAAGCAGCAAGAAGATGCTGAAAAAGAACAACGCCGTCGAGAAAAGGAAGAAGCTGAGTTGAAAAAGCAACTATCCATAAAAAAGCAAGCTTCAATCATGGAACGTTTTGTCAAAAGAAGCAAAACCATCGTGGCATGCCAGAGCGACCAATTTCCAACTAAAGCAACTGTGTCTGATTTGTTGAGTAAAAACAGTGAAAATATGGCTGAGGTAGTCACCCAGTCAATGGATCATACTCTTTCATCTAATGAGGAGATTATTGCTGAGGATATCCGCAGGTTGCACGTGTCTTCCTGGCGCCACTTAGGCCATTCTATTCGGTCAAACAGAAACCAACACTGGGGCATACGTCAGAAGCCTAAGACTGAACTATTTAAGGAACTTAAGCTCACAACCAGTAAAGGACTAGTTCGTGGTGATGATTTAAGCACAGAGAGACTTGTAGATAGATGGAGAGAACATGTTTCCGATGATAAATCATGTCAGGCTAATACAGATTTTTCTCTTACTGATGTTAAAAAGTGCAAACGGGGAAAGCAGTTGTTACAATTTGATAAGAGCTGTAGACCTGCATTCTATGGTATATGGCCTAAGAAAAGTCATGTTGTTCGACCCTGTCACCCTTTTAGAAAGGACCCGGACTTGGATTATGATGTGGATAGCGATGAGGAGTGGGAAGAGGAGGATCCTGGTGAAAGCCTGTCTGATTGTGATAAAGACGATGAAGAGGAAGGCTTAGAAGAAGGGTGTTCAAAAGCTGATGATGAAGATGAAAGTGAAGATGGCTTTTTTGTACCCGATGGGTATCTCTCAGAAAATGAGGGAGTACAAGTTGACAGGATGGAAACTGATATAACATATGAGGAGACCAGAATCTCACCTAGTTTTACGCAAGATTTAGAGAGCGAGAAATTCTCTATTTTGCTTCGACAGCAAAAATATTTAGGAAATTTGACAGAACGCTCTCTTCAGAAAAATCAGCCTTTAATTATATCAAATTTGATGCATGAGAAGGTCTCTTTGCTAACAGCTGAAGATCTTAATGGTATTCTTAAGCTCGAACAGATGTGCTTGCAAGCTCTTAGTATGCACATATTTCCTGGCAGTTCACCTGTGGAGATATCAGTTGATGGCTTACCAGAAGAAGACCAAGAAGTTTTCCTTTCAAATGGCACGCCCTGTGTTAAATCAATTTCCTCTGTGACTGTTATACCAGAATCGGATTTGCCTACAATAGTGTCTGCCATTCAGTCATGCTCACAGGGCATCAATAAAGTGTTACAAACTTTGCAGAAAAAGTTCCCAGATATGTCGAAGTCTCAGTTAAGGAATAAAGTGCGTGAGATATCAGATTTTGCAGATAACCGATGGCAGGTGAAGAAAGAAATTTTGGACAAAGTTGGCTTTTCAATATCTCCTGAAAAGAGAGCTGGGCAGACCAAGAGTATTGCTGCATTTTTCTCGAAAAGGTGCTTGCCGCCTACTGGTAAAAGTTTCAATCCTAATGAAAAGTCACCTCAGCCAGCTGTGAAGCCAGGTTGTTTTGGACAAGGGCAGCAGGGTTGCGCATATGAACGCCCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006338 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008283 GO:0009555 GO:0009888 GO:0009934 GO:0009987 GO:0010026 GO:0016043 GO:0022603 GO:0022607 GO:0030154 GO:0031497 GO:0031507 GO:0032501 GO:0032502 GO:0032991 GO:0033186 GO:0033554 GO:0034622 GO:0034641 GO:0034728 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0045787 GO:0046483 GO:0048229 GO:0048366 GO:0048367 GO:0048509 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051276 GO:0051716 GO:0051726 GO:0065003 GO:0065004 GO:0065007 GO:0070828 GO:0071103 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090558 GO:0099402 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CAF1A

Protein Analysis

841

Amino Acids

96.05

Weight (kDa)

5.86

Isoelectric Point (pI)

59.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65470 AT1G65470
fragaria_vesca	FvH4_6g00081 FvH4_6g00081 FvH4_6g00081 FvH4_6g00081 FvH4_6g00081 FvH4_6g00081
malus_domestica	MD00G1017400.v1.1 MD12G1261700.v1.1
prunus_persica	Prupe.6G365000_v2.0.a1 Prupe.6G365000_v2.0.a1
pyrus_communis	pycom04g21970 pycom12g24210
rosa_chinensis	RchiOBHm_Chr3g0447421
rosa_laevigata	RLG00000026000
rosa_multiflora	Rmu_ssc0000473.1_g000021
rosa_roxburghii	Rroxscaffold_6G00425620
rosa_rugosa	Rorug02G0601300 Rorug02G0601400 Rorug02G0601500 Rorug02G0601600
rosa_samantha	Rh3AG001500 Rh3BG001200 Rh3CG001200 Rh3DG001400
rosa_wichuraiana	Rw3G000090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2302
Acc16I	TGCGCA	1 cut(s)	2506
Acc36I	ACCTGC	3 cut(s)	1206, 1516, 2302
AccB1I	GGYRCC	1 cut(s)	1236
AccB7I	CCANNNNNTGG	1 cut(s)	1165
AccBSI	CCGCTC	1 cut(s)	684
AccI	GTMKAC	1 cut(s)	1504
AccII	CGCG	1 cut(s)	513
AciI	CCGC	7 cut(s)	30, 513, 569, 682, 865, 1213, 2417
AclI	AACGTT	1 cut(s)	1042
AclWI	GGATC	6 cut(s)	544, 673, 702, 1176, 1619, 1632
AcoI	YGGCCR	1 cut(s)	46
AcsI	RAATTY	5 cut(s)	250, 1850, 1888, 1936, 2325
AcuI	CTGAAG	3 cut(s)	91, 1892, 1992
AcvI	CACGTG	1 cut(s)	1225
AcyI	GRCGYC	1 cut(s)	1237
AfaI	GTAC	3 cut(s)	410, 1734, 1767
AfeI	AGCGCT	1 cut(s)	663
AfiI	CCNNNNNNNGG	7 cut(s)	512, 637, 1165, 1279, 1582, 2311, 2423
AflII	CTTAAG	2 cut(s)	1322, 1991
AflIII	ACRYGT	2 cut(s)	1224, 1399
AgsI	TTSAA	9 cut(s)	152, 523, 872, 1000, 1032, 1692, 2106, 2349, 2437
AhlI	ACTAGT	1 cut(s)	1345
AjnI	CCWGG	4 cut(s)	1232, 1627, 2038, 2473
AjuI	GAANNNNNNNTTGG	6 cut(s)	344, 376, 797, 829, 2312, 2344
Alw21I	GWGCWC	1 cut(s)	387
Alw26I	GTCTC	5 cut(s)	470, 1369, 1799, 1960, 2262
AlwI	GGATC	6 cut(s)	544, 673, 702, 1176, 1619, 1632
AlwNI	CAGNNNCTG	1 cut(s)	506
Aor51HI	AGCGCT	1 cut(s)	663
AoxI	GGCC	4 cut(s)	46, 363, 1246, 1526
ApeKI	GCWGC	4 cut(s)	286, 943, 2390, 2494
ApoI	RAATTY	5 cut(s)	250, 1850, 1888, 1936, 2325
AseI	ATTAAT	2 cut(s)	689, 761
Asp700I	GAANNNNTTC	2 cut(s)	156, 2237
AspLEI	GCGC	5 cut(s)	513, 534, 664, 1239, 2507
AspS9I	GGNCC	1 cut(s)	1573
AsuC2I	CCSGG	1 cut(s)	1577
AsuHPI	GGTGA	8 cut(s)	1147, 1367, 1550, 1643, 1809, 2040, 2326, 2445
AvaII	GGWCC	1 cut(s)	1573
BamHI	GGATCC	1 cut(s)	1624
BanI	GGYRCC	1 cut(s)	1236
BbrPI	CACGTG	1 cut(s)	1225
BbsI	GAAGAC	3 cut(s)	86, 1221, 2091
Bbv12I	GWGCWC	1 cut(s)	387
BbvCI	CCTCAGC	3 cut(s)	1146, 1203, 2457
BbvI	GCAGC	4 cut(s)	273, 955, 2377, 2506
BccI	CCATC	9 cut(s)	167, 196, 1073, 1383, 1715, 1733, 1774, 2063, 2301
BceAI	ACGGC	2 cut(s)	43, 957
BcgI	CGANNNNNNTGC	4 cut(s)	1048, 1082, 2382, 2416
BciT130I	CCWGG	4 cut(s)	1234, 1629, 2040, 2475
BcnI	CCSGG	1 cut(s)	1577
BcoDI	GTCTC	5 cut(s)	470, 1369, 1799, 1960, 2262
BcuI	ACTAGT	1 cut(s)	1345
BfaI	CTAG	2 cut(s)	1346, 1821
BfmI	CTRYAG	2 cut(s)	932, 1501
BfoI	RGCGCY	2 cut(s)	665, 1240
BfrI	CTTAAG	2 cut(s)	1322, 1991
BfuAI	ACCTGC	3 cut(s)	1206, 1516, 2302
BglI	GCCNNNNNGGC	1 cut(s)	1245
BglII	AGATCT	1 cut(s)	1975
BisI	GCNGC	6 cut(s)	287, 866, 944, 2391, 2417, 2495
BlsI	GCNGC	6 cut(s)	288, 867, 945, 2392, 2418, 2496
Bme1390I	CCNGG	5 cut(s)	1234, 1577, 1629, 2040, 2475
Bme18I	GGWCC	1 cut(s)	1573
BmgT120I	GGNCC	1 cut(s)	1573
BmiI	GGNNCC	3 cut(s)	1238, 1575, 1626
BmrFI	CCNGG	5 cut(s)	1234, 1577, 1629, 2040, 2475
BmrI	ACTGGG	2 cut(s)	1153, 1288
BmsI	GCATC	6 cut(s)	418, 486, 650, 943, 1932, 2214
BmuI	ACTGGG	2 cut(s)	1153, 1288
BpiI	GAAGAC	3 cut(s)	86, 1221, 2091
BplI	GAGNNNNNCTC	4 cut(s)	1838, 1870, 1940, 1972
Bpu10I	CCTNAGC	3 cut(s)	1146, 1203, 2457
BpuEI	CTTGAG	1 cut(s)	149
BpuMI	CCSGG	1 cut(s)	1577
BsaAI	YACGTR	1 cut(s)	1225
BsaBI	GATNNNNATC	1 cut(s)	1743
BsaHI	GRCGYC	1 cut(s)	1237
BsaI	GGTCTC	2 cut(s)	1799, 1960
BsaXI	ACNNNNNCTCC	4 cut(s)	434, 464, 1755, 1785
Bsc4I	CCNNNNNNNGG	7 cut(s)	512, 637, 1165, 1279, 1582, 2311, 2423
Bse1I	ACTGG	4 cut(s)	1159, 1283, 1335, 2428
Bse3DI	GCAATG	2 cut(s)	585, 591
Bse8I	GATNNNNATC	1 cut(s)	1743
BseBI	CCWGG	4 cut(s)	1234, 1629, 2040, 2475
BseGI	GGATG	2 cut(s)	490, 1785
BseJI	GATNNNNATC	1 cut(s)	1743
BseLI	CCNNNNNNNGG	7 cut(s)	512, 637, 1165, 1279, 1582, 2311, 2423
BseMI	GCAATG	2 cut(s)	585, 591
BseMII	CTCAG	8 cut(s)	158, 786, 984, 1137, 1194, 1764, 2273, 2471
BseNI	ACTGG	4 cut(s)	1159, 1283, 1335, 2428
BseRI	GAGGAG	5 cut(s)	323, 1205, 1622, 1634, 1817
BseXI	GCAGC	4 cut(s)	273, 955, 2377, 2506
BseYI	CCCAGC	1 cut(s)	2369
BsgI	GTGCAG	1 cut(s)	738
Bsh1236I	CGCG	1 cut(s)	513
BshFI	GGCC	4 cut(s)	48, 365, 1248, 1528
BshNI	GGYRCC	1 cut(s)	1236
BsiHKAI	GWGCWC	1 cut(s)	387
BsiSI	CCGG	2 cut(s)	49, 1577
BslFI	GGGAC	1 cut(s)	138
BslI	CCNNNNNNNGG	7 cut(s)	512, 637, 1165, 1279, 1582, 2311, 2423
BsmAI	GTCTC	5 cut(s)	470, 1369, 1799, 1960, 2262
BsmFI	GGGAC	1 cut(s)	138
BsmI	GAATGC	1 cut(s)	1511
BsnI	GGCC	4 cut(s)	48, 365, 1248, 1528
Bso31I	GGTCTC	2 cut(s)	1799, 1960
Bsp1286I	GDGCHC	1 cut(s)	387
Bsp143I	GATC	9 cut(s)	67, 270, 549, 610, 678, 694, 1168, 1624, 1975
BspACI	CCGC	7 cut(s)	30, 513, 569, 682, 865, 1213, 2417
BspANI	GGCC	4 cut(s)	48, 365, 1248, 1528
BspCNI	CTCAG	8 cut(s)	157, 787, 985, 1138, 1195, 1763, 2272, 2470
BspFNI	CGCG	1 cut(s)	513
BspLI	GGNNCC	3 cut(s)	1238, 1575, 1626
BspMAI	CTGCAG	1 cut(s)	936
BspMI	ACCTGC	3 cut(s)	1206, 1516, 2302
BspPI	GGATC	6 cut(s)	544, 673, 702, 1176, 1619, 1632
BspQI	GCTCTTC	1 cut(s)	368
BspT107I	GGYRCC	1 cut(s)	1236
BspTI	CTTAAG	2 cut(s)	1322, 1991
BspTNI	GGTCTC	2 cut(s)	1799, 1960
BsrBI	CCGCTC	1 cut(s)	684
BsrDI	GCAATG	2 cut(s)	585, 591
BsrI	ACTGG	4 cut(s)	1159, 1283, 1335, 2428
BssMI	GATC	9 cut(s)	67, 270, 549, 610, 678, 694, 1168, 1624, 1975
BssNI	GRCGYC	1 cut(s)	1237
Bst2UI	CCWGG	4 cut(s)	1234, 1629, 2040, 2475
Bst4CI	ACNGT	4 cut(s)	413, 1108, 1133, 2146
Bst6I	CTCTTC	7 cut(s)	270, 368, 744, 906, 1611, 1659, 1911
BstACI	GRCGYC	1 cut(s)	1237
BstAFI	CTTAAG	2 cut(s)	1322, 1991
BstBAI	YACGTR	1 cut(s)	1225
BstC8I	GCNNGC	8 cut(s)	501, 1026, 1075, 2012, 2016, 2114, 2414, 2463
BstENI	CCTNNNNNAGG	1 cut(s)	635
BstF5I	GGATG	2 cut(s)	490, 1785
BstFNI	CGCG	1 cut(s)	513
BstH2I	RGCGCY	2 cut(s)	665, 1240
BstHHI	GCGC	5 cut(s)	513, 534, 664, 1239, 2507
BstKTI	GATC	9 cut(s)	70, 273, 552, 613, 681, 697, 1171, 1627, 1978
BstMAI	GTCTC	5 cut(s)	470, 1369, 1799, 1960, 2262
BstMBI	GATC	9 cut(s)	67, 270, 549, 610, 678, 694, 1168, 1624, 1975
BstMWI	GCNNNNNNNGC	8 cut(s)	140, 575, 725, 865, 940, 1245, 1870, 2202
BstNI	CCWGG	4 cut(s)	1234, 1629, 2040, 2475
BstNSI	RCATGY	2 cut(s)	1077, 1403
BstSCI	CCNGG	5 cut(s)	1232, 1575, 1627, 2038, 2473
BstSFI	CTRYAG	2 cut(s)	932, 1501
BstUI	CGCG	1 cut(s)	513
BstV1I	GCAGC	4 cut(s)	273, 955, 2377, 2506
BstV2I	GAAGAC	3 cut(s)	86, 1221, 2091
BstX2I	RGATCY	4 cut(s)	549, 678, 1624, 1975
BstYI	RGATCY	4 cut(s)	549, 678, 1624, 1975
BsuRI	GGCC	4 cut(s)	48, 365, 1248, 1528
BtgZI	GCGATG	1 cut(s)	1617
BtsCI	GGATG	2 cut(s)	490, 1785
BtsIMutI	CAGTG	3 cut(s)	711, 1138, 1276
BveI	ACCTGC	3 cut(s)	1206, 1516, 2302
Cac8I	GCNNGC	8 cut(s)	501, 1026, 1075, 2012, 2016, 2114, 2414, 2463
CaiI	CAGNNNCTG	1 cut(s)	506
CfoI	GCGC	5 cut(s)	513, 534, 664, 1239, 2507
Cfr13I	GGNCC	1 cut(s)	1573
CseI	GACGC	1 cut(s)	887
Csp6I	GTAC	3 cut(s)	409, 1733, 1766
CviQI	GTAC	3 cut(s)	409, 1733, 1766
DinI	GGCGCC	1 cut(s)	1238
DpnI	GATC	9 cut(s)	69, 272, 551, 612, 680, 696, 1170, 1626, 1977
DpnII	GATC	9 cut(s)	67, 270, 549, 610, 678, 694, 1168, 1624, 1975
EaeI	YGGCCR	1 cut(s)	46
Eam1104I	CTCTTC	7 cut(s)	270, 368, 744, 906, 1611, 1659, 1911
EarI	CTCTTC	7 cut(s)	270, 368, 744, 906, 1611, 1659, 1911
EciI	GGCGGA	1 cut(s)	45
Eco31I	GGTCTC	2 cut(s)	1799, 1960
Eco32I	GATATC	3 cut(s)	1210, 2061, 2286
Eco47I	GGWCC	1 cut(s)	1573
Eco47III	AGCGCT	1 cut(s)	663
Eco57I	CTGAAG	3 cut(s)	91, 1892, 1992
Eco72I	CACGTG	1 cut(s)	1225
EcoNI	CCTNNNNNAGG	1 cut(s)	635
EcoO109I	RGGNCCY	1 cut(s)	1573
EcoRI	GAATTC	1 cut(s)	250
EcoRII	CCWGG	4 cut(s)	1232, 1627, 2038, 2473
EcoRV	GATATC	3 cut(s)	1210, 2061, 2286
EcoT22I	ATGCAT	1 cut(s)	1947
EgeI	GGCGCC	1 cut(s)	1238
EheI	GGCGCC	1 cut(s)	1238
FalI	AAGNNNNNCTT	2 cut(s)	2085, 2117
FaqI	GGGAC	1 cut(s)	138
FauNDI	CATATG	2 cut(s)	1798, 2509
FblI	GTMKAC	1 cut(s)	1504
Fnu4HI	GCNGC	6 cut(s)	287, 866, 944, 2391, 2417, 2495
FokI	GGATG	2 cut(s)	497, 1792
Fsp4HI	GCNGC	6 cut(s)	287, 866, 944, 2391, 2417, 2495
FspBI	CTAG	2 cut(s)	1346, 1821
FspI	TGCGCA	1 cut(s)	2506
GlaI	GCGC	5 cut(s)	512, 533, 663, 1238, 2506
GluI	GCNGC	6 cut(s)	287, 866, 944, 2391, 2417, 2495
GsaI	CCCAGC	1 cut(s)	2373
HaeII	RGCGCY	2 cut(s)	665, 1240
HaeIII	GGCC	4 cut(s)	48, 365, 1248, 1528
HapII	CCGG	2 cut(s)	49, 1577
HgaI	GACGC	1 cut(s)	887
HhaI	GCGC	5 cut(s)	513, 534, 664, 1239, 2507
Hin1I	GRCGYC	1 cut(s)	1237
Hin6I	GCGC	5 cut(s)	511, 532, 662, 1237, 2505
HinP1I	GCGC	5 cut(s)	511, 532, 662, 1237, 2505
HincII	GTYRAC	1 cut(s)	1774
HindII	GTYRAC	1 cut(s)	1774
HindIII	AAGCTT	2 cut(s)	299, 1026
HinfI	GANTC	8 cut(s)	152, 213, 449, 455, 878, 914, 1812, 2156
HpaII	CCGG	2 cut(s)	49, 1577
HphI	GGTGA	8 cut(s)	1147, 1367, 1550, 1643, 1809, 2040, 2326, 2445
Hpy166II	GTNNAC	4 cut(s)	824, 1505, 1774, 2048
Hpy188III	TCNNGA	6 cut(s)	319, 328, 902, 977, 2357, 2401
Hpy8I	GTNNAC	4 cut(s)	824, 1505, 1774, 2048
Hpy99I	CGWCG	2 cut(s)	903, 978
HpyAV	CCTTC	6 cut(s)	316, 631, 847, 1664, 1676, 1945
HpyCH4III	ACNGT	4 cut(s)	413, 1108, 1133, 2146
HpyCH4IV	ACGT	5 cut(s)	820, 826, 1042, 1224, 1288
HpyF10VI	GCNNNNNNNGC	8 cut(s)	140, 575, 725, 865, 940, 1245, 1870, 2202
HpySE526I	ACGT	5 cut(s)	820, 826, 1042, 1224, 1288
Hsp92I	GRCGYC	1 cut(s)	1237
HspAI	GCGC	5 cut(s)	511, 532, 662, 1237, 2505
KasI	GGCGCC	1 cut(s)	1236
Kzo9I	GATC	9 cut(s)	67, 270, 549, 610, 678, 694, 1168, 1624, 1975
LguI	GCTCTTC	1 cut(s)	368
LmnI	GCTCC	1 cut(s)	856
Lsp1109I	GCAGC	4 cut(s)	273, 955, 2377, 2506
LweI	GCATC	6 cut(s)	418, 486, 650, 943, 1932, 2214
MaeI	CTAG	2 cut(s)	1346, 1821
MaeII	ACGT	5 cut(s)	820, 826, 1042, 1224, 1288
MaeIII	GTNAC	8 cut(s)	239, 355, 1153, 1482, 1556, 2140, 2217, 2451
MalI	GATC	9 cut(s)	69, 272, 551, 612, 680, 696, 1170, 1626, 1977
MbiI	CCGCTC	1 cut(s)	684
MboI	GATC	9 cut(s)	67, 270, 549, 610, 678, 694, 1168, 1624, 1975
MfeI	CAATTG	2 cut(s)	21, 42
MflI	RGATCY	4 cut(s)	549, 678, 1624, 1975
MhlI	GDGCHC	1 cut(s)	387
Mly113I	GGCGCC	1 cut(s)	1237
MlyI	GAGTC	5 cut(s)	222, 458, 464, 887, 923
MmeI	TCCRAC	4 cut(s)	81, 373, 420, 1118
Mph1103I	ATGCAT	1 cut(s)	1947
MroXI	GAANNNNTTC	2 cut(s)	156, 2237
MslI	CAYNNNNRTG	1 cut(s)	197
MspA1I	CMGCKG	2 cut(s)	1970, 2465
MspCI	CTTAAG	2 cut(s)	1322, 1991
MspI	CCGG	2 cut(s)	49, 1577
MspR9I	CCNGG	5 cut(s)	1234, 1577, 1629, 2040, 2475
MunI	CAATTG	2 cut(s)	21, 42
Mva1269I	GAATGC	1 cut(s)	1511
MvaI	CCWGG	4 cut(s)	1234, 1629, 2040, 2475
MvnI	CGCG	1 cut(s)	513
MwoI	GCNNNNNNNGC	8 cut(s)	140, 575, 725, 865, 940, 1245, 1870, 2202
NarI	GGCGCC	1 cut(s)	1237
NciI	CCSGG	1 cut(s)	1577
NdeI	CATATG	2 cut(s)	1798, 2509
NdeII	GATC	9 cut(s)	67, 270, 549, 610, 678, 694, 1168, 1624, 1975
NlaIV	GGNNCC	3 cut(s)	1238, 1575, 1626
NmuCI	GTSAC	5 cut(s)	355, 1153, 1556, 2140, 2451
NsbI	TGCGCA	1 cut(s)	2506
NsiI	ATGCAT	1 cut(s)	1947
NspI	RCATGY	2 cut(s)	1077, 1403
PaeI	GCATGC	1 cut(s)	1077
PaqCI	CACCTGC	1 cut(s)	2302
PciI	ACATGT	1 cut(s)	1399
PciSI	GCTCTTC	1 cut(s)	368
PctI	GAATGC	1 cut(s)	1511
PdmI	GAANNNNTTC	2 cut(s)	156, 2237
PfeI	GAWTC	3 cut(s)	152, 1812, 2156
PflFI	GACNNNGTC	1 cut(s)	1554
PflMI	CCANNNNNTGG	1 cut(s)	1165
PkrI	GCNGC	6 cut(s)	288, 867, 945, 2392, 2418, 2496
PleI	GAGTC	5 cut(s)	221, 457, 463, 886, 922
PluTI	GGCGCC	1 cut(s)	1240
PmaCI	CACGTG	1 cut(s)	1225
PmlI	CACGTG	1 cut(s)	1225
PpsI	GAGTC	5 cut(s)	221, 457, 463, 886, 922
Ppu21I	YACGTR	1 cut(s)	1225
PpuMI	RGGWCCY	1 cut(s)	1573
PscI	ACATGT	1 cut(s)	1399
PshBI	ATTAAT	2 cut(s)	689, 761
Psp1406I	AACGTT	1 cut(s)	1042
Psp5II	RGGWCCY	1 cut(s)	1573
Psp6I	CCWGG	4 cut(s)	1232, 1627, 2038, 2473
PspCI	CACGTG	1 cut(s)	1225
PspFI	CCCAGC	1 cut(s)	2369
PspGI	CCWGG	4 cut(s)	1232, 1627, 2038, 2473
PspN4I	GGNNCC	3 cut(s)	1238, 1575, 1626
PspPI	GGNCC	1 cut(s)	1573
PspPPI	RGGWCCY	1 cut(s)	1573
PstI	CTGCAG	1 cut(s)	936
PstNI	CAGNNNCTG	1 cut(s)	506
PsuI	RGATCY	4 cut(s)	549, 678, 1624, 1975
PsyI	GACNNNGTC	1 cut(s)	1554
PvuII	CAGCTG	2 cut(s)	1970, 2465
RsaI	GTAC	3 cut(s)	410, 1734, 1767
RsaNI	GTAC	3 cut(s)	409, 1733, 1766
RseI	CAYNNNNRTG	1 cut(s)	197
SapI	GCTCTTC	1 cut(s)	368
SatI	GCNGC	6 cut(s)	287, 866, 944, 2391, 2417, 2495
Sau3AI	GATC	9 cut(s)	67, 270, 549, 610, 678, 694, 1168, 1624, 1975
Sau96I	GGNCC	1 cut(s)	1573
SchI	GAGTC	5 cut(s)	222, 458, 464, 887, 923
ScrFI	CCNGG	5 cut(s)	1234, 1577, 1629, 2040, 2475
SduI	GDGCHC	1 cut(s)	387
SfaNI	GCATC	6 cut(s)	418, 486, 650, 943, 1932, 2214
SfcI	CTRYAG	2 cut(s)	932, 1501
SfoI	GGCGCC	1 cut(s)	1238
SinI	GGWCC	1 cut(s)	1573
SmiMI	CAYNNNNRTG	1 cut(s)	197
SmlI	CTYRAG	3 cut(s)	128, 1322, 1991
SmoI	CTYRAG	3 cut(s)	128, 1322, 1991
SpeI	ACTAGT	1 cut(s)	1345
SphI	GCATGC	1 cut(s)	1077
SsiI	CCGC	7 cut(s)	30, 513, 569, 682, 865, 1213, 2417
SspDI	GGCGCC	1 cut(s)	1236
SspI	AATATT	2 cut(s)	526, 1880
SspMI	CTAG	2 cut(s)	1346, 1821
StyD4I	CCNGG	5 cut(s)	1232, 1575, 1627, 2038, 2473
TaaI	ACNGT	4 cut(s)	413, 1108, 1133, 2146
TaiI	ACGT	5 cut(s)	823, 829, 1045, 1227, 1291
TaqII	GACCGA	2 cut(s)	244, 1248
TatI	WGTACW	1 cut(s)	1765
TauI	GCSGC	2 cut(s)	868, 2419
TfiI	GAWTC	3 cut(s)	152, 1812, 2156
TscAI	CASTG	3 cut(s)	711, 1138, 1283
TseFI	GTSAC	5 cut(s)	355, 1153, 1556, 2140, 2451
TseI	GCWGC	4 cut(s)	286, 943, 2390, 2494
Tsp45I	GTSAC	5 cut(s)	355, 1153, 1556, 2140, 2451
TspDTI	ATGAA	8 cut(s)	263, 650, 906, 1170, 1677, 1719, 1725, 2460
TspGWI	ACGGA	1 cut(s)	348
TspRI	CASTG	3 cut(s)	711, 1138, 1283
Tth111I	GACNNNGTC	1 cut(s)	1554
Van91I	CCANNNNNTGG	1 cut(s)	1165
Vha464I	CTTAAG	2 cut(s)	1322, 1991
VpaK11BI	GGWCC	1 cut(s)	1573
VspI	ATTAAT	2 cut(s)	689, 761
XagI	CCTNNNNNAGG	1 cut(s)	635
XapI	RAATTY	5 cut(s)	250, 1850, 1888, 1936, 2325
XceI	RCATGY	2 cut(s)	1077, 1403
XmiI	GTMKAC	1 cut(s)	1504
XmnI	GAANNNNTTC	2 cut(s)	156, 2237
XspI	CTAG	2 cut(s)	1346, 1821
Zsp2I	ATGCAT	1 cut(s)	1947

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.