Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0006301

Physical Location & Seq

Genomic Coordinates Forward (+)

22931420 .. 22937310

Gene Structure 5891 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g21970.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2517 bp

ATGACGTGTGAAGCGGCGGTAATCGACGGCGTAAATGATCCGAGCAGCCAGAAATCTACCAACCAAGATCGGGTGAGGAAGACCCAGAAGCGAAAGAGGGCTAGCATGGATCCAGAGTGTTTGGGAGTTGAGGCGAAAAGTGTAAAGGTTCAATCTTTTCGCAAGCAGCTTGATGGGTTGTTTGGGTACTACAAGGAACTGATGGGTCAGAAATTAGATTTAGATCCGAAGCAATGTGTGAACAATGCGAACTCGATCATTGGGGCTCACCCCAATAGATTGATCGAAGAGAGTGGGCTGCCATTGTCCAAGCTTGTTGAGGAGGTCTTTGACAAGGTCAAGAACCGAAATGAGGTTTTTGGGAATGTGACTTTGGCCTATGTGAAGAGCATTGTGCTCTTTGTTGGGCAACGAGTGATGTATGGCGTACCGAATGTTGATGCTGATGTGTTGGAGGACGAGTCCGAGTCCTGTCTTTGGTGTTGGGAGACAAGAGATGTAAAGTTGATGCCAGCATCTGTGCGAGGAGTATTGAATATTAGGCGTACCTGTCGAAGAAAGATCCATGAGAGGATTACTGCTGTTTCTGGAATGACAATGGCACTACAAAATCCCGAAAGCGACCAAAATTACATACATTACCTGATGAAGGCATCAGAACGGCTTGATAAAGCGCTGTCCGAGGAAAAGATTCGCGCGTTAATAGATCGCTTATCAGTGAAAAATGGTGCAGATGTGGCAAAGAAGGAAGCAAAAAGAGAAGAAAAACTACTCATTAAACAAATGGAAAGAGATAAACGAGAGGCTGAGAAAGAGAAAAAAAGATTGGAACGTGAGCGGCAAAAGGAAGAGTTGCAAAGTGACAAAGAGTTAAAGCGGCTGCAAGGGGAGTCAGAAAAAGATGAAAAGCGTCGTGAAAAAGCAGAGTCTGAAATGAGGAAACTGCAGAGGAAGCAGCAAGAGGATGCTGAAAGAGAACAACGCCGTCGACAAAAGGAAGAAGCTGAATTGAAAAAAAAACTTTCCATAAAAAGGCAGGCTTCAATTATGGAACAATTTGTCAAAAGAAGCAAAACCAGAGCTGCATGCCAGAATGACCAATTCCTAACTAAAGCAATTGTCTCCGAATCATTGGGTAAAAACAGTGAAAGTATGCCTGATGTAGTAACTCAGTCAATGGATTACATTCTTTCATCTAATATGGAGATGAGTGCTGAGGATATACGCAGGTCACACTTGTCTTCTTGGCGCCATGTTGGTTATGTTATTCGTTCAAACAGAAGCCAACACTGGGGCCGACGTCAGAAGCCTAAGATTGAACTATTTAAGGAACTGAAGCTCACAACCAGTAAAGAGCTAGTTCATGGTGATTTAAGCACGGAGAAACTTGCAGATAGATGGGGAGAACAAGTTTGCAATGATAAATCATGTCAGACTAATACAGATTGTTCTCTTGCTGATGTTAAAAGATGCAAGCTGGGAAAGCAGTTGTTACAATTTGATAAAAGCTGTAGACCTGCATTTTATGGTATATGGCCTAAGAAAAGTCATGTTGTTGGACCATGCCACCCTTTTAGGAAGGACCCAGACTTGGATTATGATGTTGACAGCGATGAGGAGTGGGAAGAGGAGGAGCCTGGAGAAAACCTCTCAGATTGCGATAAAGACGACGAAGAAGAAAGCTTGGAAGAGGGTTGTTCTAAACCTGATGATGAAGACGAAAGTGAAGACGGCTTTTTTGTACCTGATGGGTATCTCTCAGAAAATGAGGGTGTACAAGTTGACAGGATGGAAACTGATACAACATTTGAGGAGACCAGAAGCTCACCCAGTGTTAAGCAAGATTTAGAGAGTGAAAAATTCTCTATATTGCTTCGACAGCAAAAATATTTAGGGAATTTGACAGAACGTGCTCTTCAGAAAAATCAGCCTTTAATTATATCAAATATGGTGCATGACAAGGTCTCTTTGTTAAAGGCTGAAGATCTTAATGGTACTCTTAAACTGGAACAGATGTGCTTGCAAGCTCTGAGTATTCATGTATTTCCTGGTAGCTCACCTGTGGAGATATCAGTTGATGGCATACAAGAGGACGACCAAGAAGTTTGTCTTTCAAGTGGCAATCGTTGTAGTAAATCAACCTCTTCTGTGACAGTTATACCAGAATCAGATTTGCCTGCAATAGTGTCCGTCATTCAGTCATGCTCACAGAGCATAAATAAGGTGTTACAAACTTTGCAACACAAGTTCCCAGCTGTATCGAAGTCTCACTTAAGGAATAAAGTGCGCGAGATATCAGATTTTGTGGATAGCCGCTGGCAGGTGAAGAAAGAAATTTTGGACAAAGTTGGCTTGTCAATATCTCCGGAAAAGAGTGCTGGGCGGAGCAAGAGTATAGCTACCTTTTTCTCGAAAAGGTGCTTGCCGCCTACTGATAAAAGCTTTACTCCTAATGAAAATTCACCTCAGGTAGCTGGGAAGGCAAGTTGTGTGGAAGGGGATCAGAGTTGCACGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006338 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008283 GO:0009555 GO:0009888 GO:0009934 GO:0009987 GO:0010026 GO:0016043 GO:0022603 GO:0022607 GO:0030154 GO:0031497 GO:0031507 GO:0032501 GO:0032502 GO:0032991 GO:0033186 GO:0033554 GO:0034622 GO:0034641 GO:0034728 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0045787 GO:0046483 GO:0048229 GO:0048366 GO:0048367 GO:0048509 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051276 GO:0051716 GO:0051726 GO:0065003 GO:0065004 GO:0065007 GO:0070828 GO:0071103 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090558 GO:0099402 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CAF1A

Protein Analysis

839

Amino Acids

95.57

Weight (kDa)

6.25

Isoelectric Point (pI)

60.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65470 AT1G65470
fragaria_vesca	FvH4_6g00081 FvH4_6g00081 FvH4_6g00081 FvH4_6g00081 FvH4_6g00081 FvH4_6g00081
malus_domestica	MD00G1017400.v1.1 MD12G1261700.v1.1
prunus_persica	Prupe.6G365000_v2.0.a1 Prupe.6G365000_v2.0.a1
pyrus_communis	pycom04g21970 pycom12g24210
rosa_chinensis	RchiOBHm_Chr3g0447421
rosa_laevigata	RLG00000026000
rosa_multiflora	Rmu_ssc0000473.1_g000021
rosa_roxburghii	Rroxscaffold_6G00425620
rosa_rugosa	Rorug02G0601300 Rorug02G0601400 Rorug02G0601500 Rorug02G0601600
rosa_samantha	Rh3AG001500 Rh3BG001200 Rh3CG001200 Rh3DG001400
rosa_wichuraiana	Rw3G000090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2311
AatII	GACGTC	1 cut(s)	1303
Acc36I	ACCTGC	3 cut(s)	1218, 1525, 2311
AccB1I	GGYRCC	1 cut(s)	1248
AccBSI	CCGCTC	1 cut(s)	838
AccI	GTMKAC	2 cut(s)	988, 1513
AccII	CGCG	3 cut(s)	696, 698, 2289
AccIII	TCCGGA	1 cut(s)	2365
AciI	CCGC	7 cut(s)	14, 17, 838, 877, 2314, 2383, 2426
AclWI	GGATC	6 cut(s)	32, 104, 117, 218, 556, 2508
AcsI	RAATTY	4 cut(s)	1859, 1897, 2334, 2458
AcuI	CTGAAG	3 cut(s)	1355, 1901, 2001
AcyI	GRCGYC	2 cut(s)	1249, 1300
AdeI	CACNNNGTG	1 cut(s)	1832
AfaI	GTAC	6 cut(s)	188, 429, 547, 1743, 1776, 1996
AfeI	AGCGCT	1 cut(s)	675
AfiI	CCNNNNNNNGG	8 cut(s)	70, 352, 477, 649, 1032, 1291, 1591, 2320
AflII	CTTAAG	1 cut(s)	2272
AflIII	ACRYGT	1 cut(s)	5
AgsI	TTSAA	7 cut(s)	152, 535, 1012, 1044, 1275, 1319, 2115
AjiI	CACGTC	1 cut(s)	6
AjnI	CCWGG	2 cut(s)	1636, 2047
AjuI	GAANNNNNNNTTGG	6 cut(s)	356, 388, 809, 841, 2321, 2353
Alw21I	GWGCWC	2 cut(s)	399, 1915
Alw26I	GTCTC	5 cut(s)	482, 1126, 1808, 1969, 2271
AlwI	GGATC	6 cut(s)	32, 104, 117, 218, 556, 2508
AlwNI	CAGNNNCTG	2 cut(s)	518, 929
Aor13HI	TCCGGA	1 cut(s)	2365
Aor51HI	AGCGCT	1 cut(s)	675
AoxI	GGCC	3 cut(s)	375, 1294, 1535
ApeKI	GCWGC	6 cut(s)	45, 166, 298, 880, 955, 1082
ApoI	RAATTY	4 cut(s)	1859, 1897, 2334, 2458
ArsI	GACNNNNNNTTYG	2 cut(s)	1721, 1753
Asp700I	GAANNNNTTC	1 cut(s)	690
AspLEI	GCGC	4 cut(s)	676, 698, 1251, 2289
AspS9I	GGNCC	3 cut(s)	1294, 1559, 1582
AsuHPI	GGTGA	7 cut(s)	85, 260, 1379, 1818, 2049, 2335, 2454
AsuNHI	GCTAGC	1 cut(s)	101
AvaII	GGWCC	2 cut(s)	1559, 1582
AxyI	CCTNAGG	1 cut(s)	2466
BamHI	GGATCC	1 cut(s)	109
BanI	GGYRCC	1 cut(s)	1248
BanII	GRGCYC	1 cut(s)	268
BarI	GAAGNNNNNNTAC	2 cut(s)	753, 785
BbsI	GAAGAC	4 cut(s)	86, 1233, 1722, 1734
Bbv12I	GWGCWC	2 cut(s)	399, 1915
BbvCI	CCTCAGC	1 cut(s)	1215
BbvI	GCAGC	6 cut(s)	57, 178, 285, 867, 967, 1069
BccI	CCATC	6 cut(s)	167, 196, 1392, 1742, 1783, 2072
BceAI	ACGGC	4 cut(s)	43, 677, 969, 1747
BciT130I	CCWGG	2 cut(s)	1638, 2049
BcoDI	GTCTC	5 cut(s)	482, 1126, 1808, 1969, 2271
BfaI	CTAG	2 cut(s)	102, 1358
BfmI	CTRYAG	2 cut(s)	944, 1510
BfoI	RGCGCY	2 cut(s)	677, 1252
BfrI	CTTAAG	1 cut(s)	2272
BfuAI	ACCTGC	3 cut(s)	1218, 1525, 2311
BglII	AGATCT	1 cut(s)	1984
Bme1390I	CCNGG	2 cut(s)	1638, 2049
Bme18I	GGWCC	2 cut(s)	1559, 1582
BmgBI	CACGTC	1 cut(s)	6
BmgT120I	GGNCC	3 cut(s)	1294, 1559, 1582
BmiI	GGNNCC	5 cut(s)	111, 1250, 1295, 1584, 1635
BmrFI	CCNGG	2 cut(s)	1638, 2049
BmrI	ACTGGG	2 cut(s)	1300, 1824
BmsI	GCATC	6 cut(s)	430, 498, 524, 662, 955, 1460
BmtI	GCTAGC	1 cut(s)	105
BmuI	ACTGGG	2 cut(s)	1300, 1824
BpiI	GAAGAC	4 cut(s)	86, 1233, 1722, 1734
BplI	GAGNNNNNCTC	2 cut(s)	1632, 1664
BpmI	CTGGAG	1 cut(s)	1659
Bpu10I	CCTNAGC	1 cut(s)	1215
BsaAI	YACGTR	1 cut(s)	2514
BsaBI	GATNNNNATC	2 cut(s)	222, 1752
BsaHI	GRCGYC	2 cut(s)	1249, 1300
BsaI	GGTCTC	2 cut(s)	1808, 1969
BsaJI	CCNNGG	1 cut(s)	681
BsaWI	WCCGGW	1 cut(s)	2365
BsaXI	ACNNNNNCTCC	6 cut(s)	446, 476, 1395, 1425, 2377, 2407
Bsc4I	CCNNNNNNNGG	8 cut(s)	70, 352, 477, 649, 1032, 1291, 1591, 2320
Bse1I	ACTGG	4 cut(s)	1295, 1347, 1830, 2010
Bse21I	CCTNAGG	1 cut(s)	2466
Bse3DI	GCAATG	2 cut(s)	239, 1423
Bse8I	GATNNNNATC	2 cut(s)	222, 1752
BseAI	TCCGGA	1 cut(s)	2365
BseBI	CCWGG	2 cut(s)	1638, 2049
BseDI	CCNNGG	1 cut(s)	681
BseGI	GGATG	2 cut(s)	970, 1794
BseJI	GATNNNNATC	2 cut(s)	222, 1752
BseLI	CCNNNNNNNGG	8 cut(s)	70, 352, 477, 649, 1032, 1291, 1591, 2320
BseMI	GCAATG	2 cut(s)	239, 1423
BseMII	CTCAG	7 cut(s)	798, 1184, 1206, 1665, 1773, 2021, 2480
BseNI	ACTGG	4 cut(s)	1295, 1347, 1830, 2010
BseRI	GAGGAG	6 cut(s)	335, 540, 1631, 1643, 1646, 1826
BseXI	GCAGC	6 cut(s)	57, 178, 285, 867, 967, 1069
BseYI	CCCAGC	4 cut(s)	1477, 2251, 2378, 2474
BsgI	GTGCAG	1 cut(s)	750
Bsh1236I	CGCG	3 cut(s)	696, 698, 2289
BshFI	GGCC	3 cut(s)	377, 1296, 1537
BshNI	GGYRCC	1 cut(s)	1248
BsiHKAI	GWGCWC	2 cut(s)	399, 1915
BsiSI	CCGG	1 cut(s)	2366
BslI	CCNNNNNNNGG	8 cut(s)	70, 352, 477, 649, 1032, 1291, 1591, 2320
BsmAI	GTCTC	5 cut(s)	482, 1126, 1808, 1969, 2271
BsnI	GGCC	3 cut(s)	377, 1296, 1537
Bso31I	GGTCTC	2 cut(s)	1808, 1969
Bsp1286I	GDGCHC	3 cut(s)	268, 399, 1915
Bsp13I	TCCGGA	1 cut(s)	2365
Bsp1407I	TGTACA	1 cut(s)	1774
BspACI	CCGC	7 cut(s)	14, 17, 838, 877, 2314, 2383, 2426
BspANI	GGCC	3 cut(s)	377, 1296, 1537
BspCNI	CTCAG	7 cut(s)	799, 1183, 1207, 1664, 1772, 2022, 2479
BspEI	TCCGGA	1 cut(s)	2365
BspFNI	CGCG	3 cut(s)	696, 698, 2289
BspLI	GGNNCC	5 cut(s)	111, 1250, 1295, 1584, 1635
BspMAI	CTGCAG	1 cut(s)	948
BspMI	ACCTGC	3 cut(s)	1218, 1525, 2311
BspOI	GCTAGC	1 cut(s)	105
BspPI	GGATC	6 cut(s)	32, 104, 117, 218, 556, 2508
BspQI	GCTCTTC	2 cut(s)	380, 1920
BspT107I	GGYRCC	1 cut(s)	1248
BspTI	CTTAAG	1 cut(s)	2272
BspTNI	GGTCTC	2 cut(s)	1808, 1969
BsrBI	CCGCTC	1 cut(s)	838
BsrDI	GCAATG	2 cut(s)	239, 1423
BsrGI	TGTACA	1 cut(s)	1774
BsrI	ACTGG	4 cut(s)	1295, 1347, 1830, 2010
BssECI	CCNNGG	1 cut(s)	681
BssNI	GRCGYC	2 cut(s)	1249, 1300
Bst2UI	CCWGG	2 cut(s)	1638, 2049
Bst4CI	ACNGT	2 cut(s)	1145, 2155
Bst6I	CTCTTC	7 cut(s)	282, 380, 843, 1620, 1683, 1920, 2149
BstACI	GRCGYC	2 cut(s)	1249, 1300
BstAFI	CTTAAG	1 cut(s)	2272
BstAUI	TGTACA	1 cut(s)	1774
BstBAI	YACGTR	1 cut(s)	2514
BstDEI	CTNAG	9 cut(s)	807, 1170, 1215, 1311, 1539, 1651, 1759, 2030, 2466
BstENI	CCTNNNNNAGG	1 cut(s)	647
BstF5I	GGATG	2 cut(s)	970, 1794
BstFNI	CGCG	3 cut(s)	696, 698, 2289
BstH2I	RGCGCY	2 cut(s)	677, 1252
BstHHI	GCGC	4 cut(s)	676, 698, 1251, 2289
BstMAI	GTCTC	5 cut(s)	482, 1126, 1808, 1969, 2271
BstMWI	GCNNNNNNNGC	6 cut(s)	737, 952, 1483, 1879, 2211, 2480
BstNI	CCWGG	2 cut(s)	1638, 2049
BstNSI	RCATGY	1 cut(s)	1089
BstSCI	CCNGG	2 cut(s)	1636, 2047
BstSFI	CTRYAG	2 cut(s)	944, 1510
BstUI	CGCG	3 cut(s)	696, 698, 2289
BstV1I	GCAGC	6 cut(s)	57, 178, 285, 867, 967, 1069
BstV2I	GAAGAC	4 cut(s)	86, 1233, 1722, 1734
BstX2I	RGATCY	4 cut(s)	109, 223, 561, 1984
BstYI	RGATCY	4 cut(s)	109, 223, 561, 1984
Bsu36I	CCTNAGG	1 cut(s)	2466
BsuRI	GGCC	3 cut(s)	377, 1296, 1537
BtgZI	GCGATG	1 cut(s)	1626
BtrI	CACGTC	1 cut(s)	6
BtsCI	GGATG	2 cut(s)	970, 1794
BtsIMutI	CAGTG	4 cut(s)	723, 1150, 1288, 1837
BveI	ACCTGC	3 cut(s)	1218, 1525, 2311
CaiI	CAGNNNCTG	2 cut(s)	518, 929
CfoI	GCGC	4 cut(s)	676, 698, 1251, 2289
Cfr13I	GGNCC	3 cut(s)	1294, 1559, 1582
CseI	GACGC	1 cut(s)	899
Csp6I	GTAC	6 cut(s)	187, 428, 546, 1742, 1775, 1995
CspCI	CAANNNNNGTGG	2 cut(s)	2472, 2507
CviQI	GTAC	6 cut(s)	187, 428, 546, 1742, 1775, 1995
DdeI	CTNAG	9 cut(s)	807, 1170, 1215, 1311, 1539, 1651, 1759, 2030, 2466
DinI	GGCGCC	1 cut(s)	1250
DraIII	CACNNNGTG	1 cut(s)	1832
Eam1104I	CTCTTC	7 cut(s)	282, 380, 843, 1620, 1683, 1920, 2149
EarI	CTCTTC	7 cut(s)	282, 380, 843, 1620, 1683, 1920, 2149
EciI	GGCGGA	1 cut(s)	2398
Eco24I	GRGCYC	1 cut(s)	268
Eco31I	GGTCTC	2 cut(s)	1808, 1969
Eco32I	GATATC	2 cut(s)	2070, 2295
Eco47I	GGWCC	2 cut(s)	1559, 1582
Eco47III	AGCGCT	1 cut(s)	675
Eco57I	CTGAAG	3 cut(s)	1355, 1901, 2001
Eco81I	CCTNAGG	1 cut(s)	2466
EcoNI	CCTNNNNNAGG	1 cut(s)	647
EcoO109I	RGGNCCY	1 cut(s)	1582
EcoRII	CCWGG	2 cut(s)	1636, 2047
EcoRV	GATATC	2 cut(s)	2070, 2295
EcoT38I	GRGCYC	1 cut(s)	268
EgeI	GGCGCC	1 cut(s)	1250
EheI	GGCGCC	1 cut(s)	1250
FalI	AAGNNNNNCTT	6 cut(s)	1024, 1056, 2094, 2126, 2255, 2287
FblI	GTMKAC	2 cut(s)	988, 1513
FokI	GGATG	2 cut(s)	977, 1801
FriOI	GRGCYC	1 cut(s)	268
FspBI	CTAG	2 cut(s)	102, 1358
GlaI	GCGC	4 cut(s)	675, 697, 1250, 2288
GsaI	CCCAGC	4 cut(s)	1481, 2255, 2382, 2478
GsuI	CTGGAG	1 cut(s)	1659
HaeII	RGCGCY	2 cut(s)	677, 1252
HaeIII	GGCC	3 cut(s)	377, 1296, 1537
HapII	CCGG	1 cut(s)	2366
HgaI	GACGC	1 cut(s)	899
HhaI	GCGC	4 cut(s)	676, 698, 1251, 2289
Hin1I	GRCGYC	2 cut(s)	1249, 1300
Hin6I	GCGC	4 cut(s)	674, 696, 1249, 2287
HinP1I	GCGC	4 cut(s)	674, 696, 1249, 2287
HincII	GTYRAC	3 cut(s)	989, 1606, 1783
HindII	GTYRAC	3 cut(s)	989, 1606, 1783
HindIII	AAGCTT	3 cut(s)	311, 1681, 2440
HinfI	GANTC	7 cut(s)	461, 467, 691, 890, 926, 1127, 2165
HpaII	CCGG	1 cut(s)	2366
HphI	GGTGA	7 cut(s)	85, 260, 1379, 1818, 2049, 2335, 2454
Hpy166II	GTNNAC	6 cut(s)	241, 989, 1514, 1606, 1775, 1783
Hpy188III	TCNNGA	7 cut(s)	113, 340, 588, 614, 914, 2366, 2410
Hpy8I	GTNNAC	6 cut(s)	241, 989, 1514, 1606, 1775, 1783
Hpy99I	CGWCG	5 cut(s)	29, 915, 990, 1302, 1673
HpyAV	CCTTC	5 cut(s)	643, 739, 1573, 2473, 2489
HpyCH4III	ACNGT	2 cut(s)	1145, 2155
HpyCH4IV	ACGT	5 cut(s)	5, 832, 1300, 1909, 2513
HpyF10VI	GCNNNNNNNGC	6 cut(s)	737, 952, 1483, 1879, 2211, 2480
HpyF3I	CTNAG	9 cut(s)	807, 1170, 1215, 1311, 1539, 1651, 1759, 2030, 2466
HpySE526I	ACGT	5 cut(s)	5, 832, 1300, 1909, 2513
Hsp92I	GRCGYC	2 cut(s)	1249, 1300
HspAI	GCGC	4 cut(s)	674, 696, 1249, 2287
KasI	GGCGCC	1 cut(s)	1248
Kpn2I	TCCGGA	1 cut(s)	2365
LguI	GCTCTTC	2 cut(s)	380, 1920
LmnI	GCTCC	2 cut(s)	1633, 2385
Lsp1109I	GCAGC	6 cut(s)	57, 178, 285, 867, 967, 1069
LweI	GCATC	6 cut(s)	430, 498, 524, 662, 955, 1460
MaeI	CTAG	2 cut(s)	102, 1358
MaeII	ACGT	5 cut(s)	5, 832, 1300, 1909, 2513
MaeIII	GTNAC	7 cut(s)	367, 860, 1165, 1230, 1491, 2149, 2226
MbiI	CCGCTC	1 cut(s)	838
MfeI	CAATTG	1 cut(s)	1116
MflI	RGATCY	4 cut(s)	109, 223, 561, 1984
MhlI	GDGCHC	3 cut(s)	268, 399, 1915
Mly113I	GGCGCC	1 cut(s)	1249
MlyI	GAGTC	4 cut(s)	470, 476, 899, 935
MmeI	TCCRAC	2 cut(s)	432, 1537
MroI	TCCGGA	1 cut(s)	2365
MroXI	GAANNNNTTC	1 cut(s)	690
MspA1I	CMGCKG	2 cut(s)	2255, 2316
MspCI	CTTAAG	1 cut(s)	2272
MspI	CCGG	1 cut(s)	2366
MspR9I	CCNGG	2 cut(s)	1638, 2049
MunI	CAATTG	1 cut(s)	1116
MvaI	CCWGG	2 cut(s)	1638, 2049
MvnI	CGCG	3 cut(s)	696, 698, 2289
MwoI	GCNNNNNNNGC	6 cut(s)	737, 952, 1483, 1879, 2211, 2480
NarI	GGCGCC	1 cut(s)	1249
NheI	GCTAGC	1 cut(s)	101
NlaIV	GGNNCC	5 cut(s)	111, 1250, 1295, 1584, 1635
NmuCI	GTSAC	4 cut(s)	367, 860, 1230, 2149
NspI	RCATGY	1 cut(s)	1089
PaeI	GCATGC	1 cut(s)	1089
PaqCI	CACCTGC	1 cut(s)	2311
PciSI	GCTCTTC	2 cut(s)	380, 1920
PdmI	GAANNNNTTC	1 cut(s)	690
PfeI	GAWTC	3 cut(s)	691, 1127, 2165
PflFI	GACNNNGTC	2 cut(s)	335, 1961
PleI	GAGTC	4 cut(s)	469, 475, 898, 934
PluTI	GGCGCC	1 cut(s)	1252
PpsI	GAGTC	4 cut(s)	469, 475, 898, 934
Ppu21I	YACGTR	1 cut(s)	2514
PpuMI	RGGWCCY	1 cut(s)	1582
Psp5II	RGGWCCY	1 cut(s)	1582
Psp6I	CCWGG	2 cut(s)	1636, 2047
PspFI	CCCAGC	4 cut(s)	1477, 2251, 2378, 2474
PspGI	CCWGG	2 cut(s)	1636, 2047
PspN4I	GGNNCC	5 cut(s)	111, 1250, 1295, 1584, 1635
PspPI	GGNCC	3 cut(s)	1294, 1559, 1582
PspPPI	RGGWCCY	1 cut(s)	1582
PstI	CTGCAG	1 cut(s)	948
PstNI	CAGNNNCTG	2 cut(s)	518, 929
PsuI	RGATCY	4 cut(s)	109, 223, 561, 1984
PsyI	GACNNNGTC	2 cut(s)	335, 1961
PvuII	CAGCTG	1 cut(s)	2255
RsaI	GTAC	6 cut(s)	188, 429, 547, 1743, 1776, 1996
RsaNI	GTAC	6 cut(s)	187, 428, 546, 1742, 1775, 1995
SalI	GTCGAC	1 cut(s)	987
SapI	GCTCTTC	2 cut(s)	380, 1920
Sau96I	GGNCC	3 cut(s)	1294, 1559, 1582
SchI	GAGTC	4 cut(s)	470, 476, 899, 935
ScrFI	CCNGG	2 cut(s)	1638, 2049
SduI	GDGCHC	3 cut(s)	268, 399, 1915
SfaNI	GCATC	6 cut(s)	430, 498, 524, 662, 955, 1460
SfcI	CTRYAG	2 cut(s)	944, 1510
SfoI	GGCGCC	1 cut(s)	1250
SinI	GGWCC	2 cut(s)	1559, 1582
SmlI	CTYRAG	1 cut(s)	2272
SmoI	CTYRAG	1 cut(s)	2272
SphI	GCATGC	1 cut(s)	1089
SsiI	CCGC	7 cut(s)	14, 17, 838, 877, 2314, 2383, 2426
SspDI	GGCGCC	1 cut(s)	1248
SspI	AATATT	2 cut(s)	538, 1889
SspMI	CTAG	2 cut(s)	102, 1358
StyD4I	CCNGG	2 cut(s)	1636, 2047
TaaI	ACNGT	2 cut(s)	1145, 2155
TaiI	ACGT	5 cut(s)	8, 835, 1303, 1912, 2516
TaqI	TCGA	8 cut(s)	24, 254, 285, 553, 988, 1876, 2261, 2411
TatI	WGTACW	1 cut(s)	1774
TauI	GCSGC	5 cut(s)	17, 841, 880, 2316, 2428
TfiI	GAWTC	3 cut(s)	691, 1127, 2165
TscAI	CASTG	4 cut(s)	723, 1150, 1295, 1837
TseFI	GTSAC	4 cut(s)	367, 860, 1230, 2149
TseI	GCWGC	6 cut(s)	45, 166, 298, 880, 955, 1082
Tsp45I	GTSAC	4 cut(s)	367, 860, 1230, 2149
TspDTI	ATGAA	7 cut(s)	662, 918, 1182, 1352, 1728, 2027, 2469
TspGWI	ACGGA	2 cut(s)	1394, 2179
TspRI	CASTG	4 cut(s)	723, 1150, 1295, 1837
Tth111I	GACNNNGTC	2 cut(s)	335, 1961
Vha464I	CTTAAG	1 cut(s)	2272
VpaK11BI	GGWCC	2 cut(s)	1559, 1582
XagI	CCTNNNNNAGG	1 cut(s)	647
XapI	RAATTY	4 cut(s)	1859, 1897, 2334, 2458
XceI	RCATGY	1 cut(s)	1089
XmiI	GTMKAC	2 cut(s)	988, 1513
XmnI	GAANNNNTTC	1 cut(s)	690
XspI	CTAG	2 cut(s)	102, 1358
ZraI	GACGTC	1 cut(s)	1301

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.