FvH4_6g05130
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
2870088 .. 2873655
3568 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g05130.t1

Sequence Viewer

Length: 1479 bp
ATGGGCAGCAGAGGAAACATAGAAGCAGGAGAGTTAACAAGTCCTCTGCTTGACGTCGCCGGCGGTCGGAACAGCTGTGCCGATGACGGTGGTGGAAGTAGTAGGAGTAAGCAAAGTGGAAGTGGAAGTGAAAATTCTTCAGCCACAAGTATGGTTGTGTTCAGCACCTTGGTTGCCGTGTCTGGTTCCTATGTTTTTGGGTCTGCGGTGGGATATTCATCACCTGCTCGGTCAGGAATCATGGATGATTTGGGCCTCTCTGTTGCTGAGTACTCAGTTTTCGGTTCAATATTGACTATTGGAGCGATGATAGGGGCAGTAGTGAGTGGGAGAATGGCAGATTACATAGGTAGAAGAGGCACTATGGGATTTTCACAGATATTCTGCATTTTTGGATGGCTAGCCATAGCTCTTTCTAAGGTTGCTTGGTGGGCTGATCTTGGAAGACTATTGGTAGGATGTGGAATGGGGCTTCTATCTTATGTGGTGCCCATATACATAGCAGAGATAACTCCCAAGAATCTGCGAGGAGCATTTACAACAGTTCATCAGCTGATGATATGTTGTGGTGTTTCACTAACATATCTTATTGGGGCTTTTGTGAACTGGCGAGCTTTGGCACTCATTGGAACTATTCCTTGTTCTGTACAAATTTTTGGTCTCTTCTTCATTCCAGAGTCTCCTAGATGGCTGGCAAAAATTGGTCAAGAGAAAGAGAGTGAAGCTGCTCTTCAGCACCTTAGGGGGAAGAATGCTGACACATCTGGAGAAGCAGCTGAGATTAGAGATTATACGGAAACTCTGAAGCGTCTCTCAGAACCAAGCATTCTTGACATATTTCAACGGAGATATGCTCATTCCCTCCTTGTCGGAGTTGGCCTGATGGTTTTGCAACAATTTGGAGGGGTTAATGGCATTGCCTTCTATGCAAGTACCATATTCATTTCAGCTGGGTTCTCGGATAGTATAGGGACTATAGCTATGGTTGGTGTTCAGATTCCGATGACTGCTTTGGGAGTAGTTTTGATGGATAAATCAGGAAGACGTCCACTTCTTCTGGTATCCTCAGCAGGAACATGCTTAGGTTGCCTCTTTGTGGGATTGTCATTCTTGTTGCAGGACCTTCAAGGATGGAGTCAGGTTACTCCCGTTTTCGCGCTTGTTGGCGTACTGGTATATACAGGATCATTCTCATTAGGCATGGGAGGAATTCCTTGGGTTATAATGTCAGAGATATTTCCTATAAACATGAAAGGCTCGGCCGGAAGCCTGGTGACAGTGGTGAGCTGGTTAGGTTCTTGGATTGTGTCATATGCATTTAATTTCCTAATGGATTGGAATTCAGCAGGGACATTCTTCATGTTTTCAAGCATTTGTGGAGTAACTGTTATCTTTGTTGCAAAGCTTGTACCGGAGACAAAGGGGCGAACACTTGAAGAAATACAAGCCTCTATGAATCCGTTTTCTGTGAAACGATGA

Protein Analysis

493

Amino Acids

52.23

Weight (kDa)

7.5

Isoelectric Point (pI)

38.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 68 - 324 3.5e-20 Major Facilitator Superfamily
Sugar_tr PF00083 77 - 483 2.7e-90 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1223
AarI CACCTGC 1 cut(s) 232
AatII GACGTC 2 cut(s) 57, 1048
Acc36I ACCTGC 1 cut(s) 232
AccB1I GGYRCC 1 cut(s) 487
AccII CGCG 1 cut(s) 1157
AciI CCGC 2 cut(s) 63, 206
AclWI GGATC 1 cut(s) 1192
AcoI YGGCCR 1 cut(s) 1260
AcsI RAATTY 4 cut(s) 133, 651, 1209, 1339
AcuI CTGAAG 3 cut(s) 123, 716, 824
AcyI GRCGYC 2 cut(s) 54, 1045
AfaI GTAC 5 cut(s) 272, 648, 934, 1170, 1410
AfiI CCNNNNNNNGG 2 cut(s) 66, 1096
AgsI TTSAA 5 cut(s) 288, 842, 1127, 1368, 1436
AjnI CCWGG 1 cut(s) 1269
Alw26I GTCTC 4 cut(s) 665, 684, 815, 1409
AlwI GGATC 1 cut(s) 1192
AoxI GGCC 3 cut(s) 253, 877, 1260
ApeKI GCWGC 3 cut(s) 6, 725, 773
ApoI RAATTY 4 cut(s) 133, 651, 1209, 1339
ArsI GACNNNNNNTTYG 2 cut(s) 643, 675
AspLEI GCGC 1 cut(s) 1159
AspS9I GGNCC 2 cut(s) 253, 1120
AsuHPI GGTGA 3 cut(s) 213, 1285, 1294
AsuNHI GCTAGC 1 cut(s) 400
AvaII GGWCC 1 cut(s) 1120
AxyI CCTNAGG 1 cut(s) 740
BaeGI GKGCMC 1 cut(s) 492
BanI GGYRCC 1 cut(s) 487
BbsI GAAGAC 2 cut(s) 451, 1048
BbvCI CCTCAGC 1 cut(s) 1066
BbvI GCAGC 3 cut(s) 18, 712, 785
BccI CCATC 5 cut(s) 390, 681, 877, 1021, 1125
BceAI ACGGC 1 cut(s) 161
BciT130I CCWGG 1 cut(s) 1271
BciVI GTATCC 1 cut(s) 1072
BcoDI GTCTC 4 cut(s) 665, 684, 815, 1409
BfaI CTAG 2 cut(s) 401, 684
BfmI CTRYAG 1 cut(s) 975
BfuAI ACCTGC 1 cut(s) 232
BfuI GTATCC 1 cut(s) 1072
BisI GCNGC 3 cut(s) 7, 726, 774
BlsI GCNGC 3 cut(s) 8, 727, 775
BmcAI AGTACT 1 cut(s) 272
Bme1390I CCNGG 1 cut(s) 1271
Bme18I GGWCC 1 cut(s) 1120
BmgT120I GGNCC 2 cut(s) 253, 1120
BmiI GGNNCC 2 cut(s) 187, 489
BmrFI CCNGG 1 cut(s) 1271
BmtI GCTAGC 1 cut(s) 404
BpiI GAAGAC 2 cut(s) 451, 1048
BplI GAGNNNNNCTC 2 cut(s) 838, 870
BpmI CTGGAG 1 cut(s) 786
Bpu10I CCTNAGC 2 cut(s) 1066, 1081
BsaBI GATNNNNATC 1 cut(s) 217
BsaHI GRCGYC 2 cut(s) 54, 1045
BsaI GGTCTC 1 cut(s) 665
BsaJI CCNNGG 2 cut(s) 168, 1214
BsaWI WCCGGW 1 cut(s) 1411
BsaXI ACNNNNNCTCC 2 cut(s) 1371, 1401
Bsc4I CCNNNNNNNGG 2 cut(s) 66, 1096
Bse118I RCCGGY 1 cut(s) 59
Bse1I ACTGG 2 cut(s) 611, 1176
Bse21I CCTNAGG 1 cut(s) 740
Bse3DI GCAATG 1 cut(s) 915
Bse8I GATNNNNATC 1 cut(s) 217
BseBI CCWGG 1 cut(s) 1271
BseDI CCNNGG 2 cut(s) 168, 1214
BseGI GGATG 4 cut(s) 250, 401, 464, 1136
BseJI GATNNNNATC 1 cut(s) 217
BseLI CCNNNNNNNGG 2 cut(s) 66, 1096
BseMI GCAATG 1 cut(s) 915
BseMII CTCAG 5 cut(s) 258, 288, 768, 828, 1080
BseNI ACTGG 2 cut(s) 611, 1176
BseRI GAGGAG 1 cut(s) 543
BseSI GKGCMC 1 cut(s) 492
BseX3I CGGCCG 1 cut(s) 1260
BseXI GCAGC 3 cut(s) 18, 712, 785
BseYI CCCAGC 1 cut(s) 950
Bsh1236I CGCG 1 cut(s) 1157
Bsh1285I CGRYCG 2 cut(s) 67, 1263
BshFI GGCC 3 cut(s) 255, 879, 1262
BshNI GGYRCC 1 cut(s) 487
BsiEI CGRYCG 2 cut(s) 67, 1263
BsiSI CCGG 3 cut(s) 60, 1263, 1412
BslFI GGGAC 2 cut(s) 985, 1363
BslI CCNNNNNNNGG 2 cut(s) 66, 1096
BsmAI GTCTC 4 cut(s) 665, 684, 815, 1409
BsmBI CGTCTC 1 cut(s) 815
BsmFI GGGAC 2 cut(s) 985, 1363
BsmI GAATGC 2 cut(s) 757, 825
BsnI GGCC 3 cut(s) 255, 879, 1262
Bso31I GGTCTC 1 cut(s) 665
Bsp1286I GDGCHC 1 cut(s) 492
Bsp1407I TGTACA 1 cut(s) 646
Bsp143I GATC 2 cut(s) 436, 1184
BspACI CCGC 2 cut(s) 63, 206
BspANI GGCC 3 cut(s) 255, 879, 1262
BspCNI CTCAG 5 cut(s) 259, 287, 769, 827, 1079
BspFNI CGCG 1 cut(s) 1157
BspLI GGNNCC 2 cut(s) 187, 489
BspMI ACCTGC 1 cut(s) 232
BspOI GCTAGC 1 cut(s) 404
BspPI GGATC 1 cut(s) 1192
BspQI GCTCTTC 1 cut(s) 735
BspT107I GGYRCC 1 cut(s) 487
BspTNI GGTCTC 1 cut(s) 665
BsrDI GCAATG 1 cut(s) 915
BsrFI RCCGGY 1 cut(s) 59
BsrGI TGTACA 1 cut(s) 646
BsrI ACTGG 2 cut(s) 611, 1176
BssAI RCCGGY 1 cut(s) 59
BssECI CCNNGG 2 cut(s) 168, 1214
BssMI GATC 2 cut(s) 436, 1184
BssNI GRCGYC 2 cut(s) 54, 1045
BssT1I CCWWGG 2 cut(s) 168, 1214
Bst2UI CCWGG 1 cut(s) 1271
Bst4CI ACNGT 4 cut(s) 89, 544, 1279, 1387
Bst6I CTCTTC 3 cut(s) 349, 668, 735
BstACI GRCGYC 2 cut(s) 54, 1045
BstAUI TGTACA 1 cut(s) 646
BstC8I GCNNGC 4 cut(s) 61, 402, 612, 693
BstDEI CTNAG 8 cut(s) 267, 274, 417, 740, 777, 814, 1066, 1081
BstF5I GGATG 4 cut(s) 250, 401, 464, 1136
BstFNI CGCG 1 cut(s) 1157
BstHHI GCGC 1 cut(s) 1159
BstKTI GATC 2 cut(s) 439, 1187
BstMAI GTCTC 4 cut(s) 665, 684, 815, 1409
BstMBI GATC 2 cut(s) 436, 1184
BstMCI CGRYCG 2 cut(s) 67, 1263
BstMWI GCNNNNNNNGC 3 cut(s) 431, 926, 1086
BstNI CCWGG 1 cut(s) 1271
BstNSI RCATGY 1 cut(s) 1080
BstSCI CCNGG 1 cut(s) 1269
BstSFI CTRYAG 1 cut(s) 975
BstSLI GKGCMC 1 cut(s) 492
BstUI CGCG 1 cut(s) 1157
BstV1I GCAGC 3 cut(s) 18, 712, 785
BstV2I GAAGAC 2 cut(s) 451, 1048
BstXI CCANNNNNNTGG 1 cut(s) 151
BstZI CGGCCG 1 cut(s) 1260
Bsu36I CCTNAGG 1 cut(s) 740
BsuI GTATCC 1 cut(s) 1072
BsuRI GGCC 3 cut(s) 255, 879, 1262
BtgZI GCGATG 1 cut(s) 320
BtsCI GGATG 4 cut(s) 250, 401, 464, 1136
BtsIMutI CAGTG 1 cut(s) 1284
BveI ACCTGC 1 cut(s) 232
Cac8I GCNNGC 4 cut(s) 61, 402, 612, 693
CfoI GCGC 1 cut(s) 1159
Cfr10I RCCGGY 1 cut(s) 59
Cfr13I GGNCC 2 cut(s) 253, 1120
CseI GACGC 1 cut(s) 797
Csp6I GTAC 5 cut(s) 271, 647, 933, 1169, 1409
CviAII CATG 5 cut(s) 241, 1077, 1201, 1249, 1360
CviQI GTAC 5 cut(s) 271, 647, 933, 1169, 1409
DdeI CTNAG 8 cut(s) 267, 274, 417, 740, 777, 814, 1066, 1081
DpnI GATC 2 cut(s) 438, 1186
DpnII GATC 2 cut(s) 436, 1184
EaeI YGGCCR 1 cut(s) 1260
EagI CGGCCG 1 cut(s) 1260
Eam1104I CTCTTC 3 cut(s) 349, 668, 735
EarI CTCTTC 3 cut(s) 349, 668, 735
EclXI CGGCCG 1 cut(s) 1260
Eco130I CCWWGG 2 cut(s) 168, 1214
Eco31I GGTCTC 1 cut(s) 665
Eco47I GGWCC 1 cut(s) 1120
Eco52I CGGCCG 1 cut(s) 1260
Eco57I CTGAAG 3 cut(s) 123, 716, 824
Eco81I CCTNAGG 1 cut(s) 740
EcoO109I RGGNCCY 1 cut(s) 1120
EcoRI GAATTC 2 cut(s) 1209, 1339
EcoRII CCWGG 1 cut(s) 1269
EcoT14I CCWWGG 2 cut(s) 168, 1214
EcoT22I ATGCAT 1 cut(s) 1318
ErhI CCWWGG 2 cut(s) 168, 1214
Esp3I CGTCTC 1 cut(s) 815
FaeI CATG 5 cut(s) 244, 1080, 1204, 1252, 1363
FalI AAGNNNNNCTT 2 cut(s) 714, 746
FaqI GGGAC 2 cut(s) 985, 1363
FatI CATG 5 cut(s) 240, 1076, 1200, 1248, 1359
FauNDI CATATG 1 cut(s) 1312
Fnu4HI GCNGC 3 cut(s) 7, 726, 774
FokI GGATG 4 cut(s) 257, 408, 471, 1143
Fsp4HI GCNGC 3 cut(s) 7, 726, 774
FspBI CTAG 2 cut(s) 401, 684
GlaI GCGC 1 cut(s) 1158
GluI GCNGC 3 cut(s) 7, 726, 774
GsaI CCCAGC 1 cut(s) 954
GsuI CTGGAG 1 cut(s) 786
HaeIII GGCC 3 cut(s) 255, 879, 1262
HapII CCGG 3 cut(s) 60, 1263, 1412
HgaI GACGC 1 cut(s) 797
HhaI GCGC 1 cut(s) 1159
Hin1I GRCGYC 2 cut(s) 54, 1045
Hin1II CATG 5 cut(s) 244, 1080, 1204, 1252, 1363
Hin6I GCGC 1 cut(s) 1157
HinP1I GCGC 1 cut(s) 1157
HincII GTYRAC 1 cut(s) 36
HindII GTYRAC 1 cut(s) 36
HindIII AAGCTT 1 cut(s) 1403
HinfI GANTC 6 cut(s) 237, 520, 677, 997, 1135, 1456
HpaI GTTAAC 1 cut(s) 36
HpaII CCGG 3 cut(s) 60, 1263, 1412
HphI GGTGA 3 cut(s) 213, 1285, 1294
Hpy166II GTNNAC 3 cut(s) 36, 604, 1049
Hpy188I TCNGA 8 cut(s) 69, 804, 817, 872, 961, 996, 1002, 1231
Hpy188III TCNNGA 6 cut(s) 234, 674, 707, 765, 830, 1038
Hpy8I GTNNAC 3 cut(s) 36, 604, 1049
Hpy99I CGWCG 1 cut(s) 59
HpyAV CCTTC 2 cut(s) 931, 1133
HpyCH4III ACNGT 4 cut(s) 89, 544, 1279, 1387
HpyCH4IV ACGT 2 cut(s) 54, 1045
HpyCH4V TGCA 6 cut(s) 387, 892, 929, 1117, 1316, 1400
HpyF10VI GCNNNNNNNGC 3 cut(s) 431, 926, 1086
HpyF3I CTNAG 8 cut(s) 267, 274, 417, 740, 777, 814, 1066, 1081
HpySE526I ACGT 2 cut(s) 54, 1045
Hsp92I GRCGYC 2 cut(s) 54, 1045
Hsp92II CATG 5 cut(s) 244, 1080, 1204, 1252, 1363
HspAI GCGC 1 cut(s) 1157
KroI GCCGGC 1 cut(s) 59
KroNI GCCGGC 1 cut(s) 61
KspAI GTTAAC 1 cut(s) 36
Kzo9I GATC 2 cut(s) 436, 1184
LguI GCTCTTC 1 cut(s) 735
LmnI GCTCC 2 cut(s) 302, 530
Lsp1109I GCAGC 3 cut(s) 18, 712, 785
MaeI CTAG 2 cut(s) 401, 684
MaeII ACGT 2 cut(s) 54, 1045
MaeIII GTNAC 3 cut(s) 1141, 1273, 1381
MalI GATC 2 cut(s) 438, 1186
MboI GATC 2 cut(s) 436, 1184
MhlI GDGCHC 1 cut(s) 492
MluCI AATT 7 cut(s) 133, 651, 699, 896, 1209, 1321, 1339
MlyI GAGTC 2 cut(s) 686, 1144
MmeI TCCRAC 2 cut(s) 47, 850
Mph1103I ATGCAT 1 cut(s) 1318
MreI CGCCGGCG 1 cut(s) 59
MroNI GCCGGC 1 cut(s) 59
MseI TTAA 3 cut(s) 35, 909, 1320
MslI CAYNNNNRTG 1 cut(s) 149
MspA1I CMGCKG 4 cut(s) 75, 553, 776, 950
MspI CCGG 3 cut(s) 60, 1263, 1412
MspR9I CCNGG 1 cut(s) 1271
Mva1269I GAATGC 2 cut(s) 757, 825
MvaI CCWGG 1 cut(s) 1271
MvnI CGCG 1 cut(s) 1157
MwoI GCNNNNNNNGC 3 cut(s) 431, 926, 1086
NaeI GCCGGC 1 cut(s) 61
NdeI CATATG 1 cut(s) 1312
NdeII GATC 2 cut(s) 436, 1184
NgoMIV GCCGGC 1 cut(s) 59
NheI GCTAGC 1 cut(s) 400
NlaIII CATG 5 cut(s) 244, 1080, 1204, 1252, 1363
NlaIV GGNNCC 2 cut(s) 187, 489
NmeAIII GCCGAG 1 cut(s) 1238
NmuCI GTSAC 1 cut(s) 1273
NsiI ATGCAT 1 cut(s) 1318
NspI RCATGY 1 cut(s) 1080
PaqCI CACCTGC 1 cut(s) 232
PciSI GCTCTTC 1 cut(s) 735
PctI GAATGC 2 cut(s) 757, 825
PdiI GCCGGC 1 cut(s) 61
PfeI GAWTC 4 cut(s) 237, 520, 997, 1456
PkrI GCNGC 3 cut(s) 8, 727, 775
PleI GAGTC 2 cut(s) 685, 1143
PpsI GAGTC 2 cut(s) 685, 1143
PpuMI RGGWCCY 1 cut(s) 1120
PsiI TTATAA 1 cut(s) 1223
Psp5II RGGWCCY 1 cut(s) 1120
Psp6I CCWGG 1 cut(s) 1269
PspFI CCCAGC 1 cut(s) 950
PspGI CCWGG 1 cut(s) 1269
PspN4I GGNNCC 2 cut(s) 187, 489
PspPI GGNCC 2 cut(s) 253, 1120
PspPPI RGGWCCY 1 cut(s) 1120
PvuII CAGCTG 4 cut(s) 75, 553, 776, 950
RsaI GTAC 5 cut(s) 272, 648, 934, 1170, 1410
RsaNI GTAC 5 cut(s) 271, 647, 933, 1169, 1409
RseI CAYNNNNRTG 1 cut(s) 149
SapI GCTCTTC 1 cut(s) 735
SaqAI TTAA 3 cut(s) 35, 909, 1320
SatI GCNGC 3 cut(s) 7, 726, 774
Sau3AI GATC 2 cut(s) 436, 1184
Sau96I GGNCC 2 cut(s) 253, 1120
ScaI AGTACT 1 cut(s) 272
SchI GAGTC 2 cut(s) 686, 1144
ScrFI CCNGG 1 cut(s) 1271
SduI GDGCHC 1 cut(s) 492
SfcI CTRYAG 1 cut(s) 975
SgrAI CRCCGGYG 1 cut(s) 59
SinI GGWCC 1 cut(s) 1120
SmiMI CAYNNNNRTG 1 cut(s) 149
Sse9I AATT 7 cut(s) 133, 651, 699, 896, 1209, 1321, 1339
SsiI CCGC 2 cut(s) 63, 206
SspI AATATT 1 cut(s) 291
SspMI CTAG 2 cut(s) 401, 684
StyD4I CCNGG 1 cut(s) 1269
StyI CCWWGG 2 cut(s) 168, 1214
TaaI ACNGT 4 cut(s) 89, 544, 1279, 1387
TaiI ACGT 2 cut(s) 57, 1048
TaqII GACCGA 1 cut(s) 219
TasI AATT 7 cut(s) 133, 651, 699, 896, 1209, 1321, 1339
TatI WGTACW 2 cut(s) 270, 646
TfiI GAWTC 4 cut(s) 237, 520, 997, 1456
Tru1I TTAA 3 cut(s) 35, 909, 1320
Tru9I TTAA 3 cut(s) 35, 909, 1320
TscAI CASTG 1 cut(s) 1284
TseFI GTSAC 1 cut(s) 1273
TseI GCWGC 3 cut(s) 6, 725, 773
Tsp45I GTSAC 1 cut(s) 1273
TspDTI ATGAA 7 cut(s) 207, 536, 658, 931, 1265, 1348, 1469
TspGWI ACGGA 3 cut(s) 809, 859, 1449
TspRI CASTG 1 cut(s) 1284
VpaK11BI GGWCC 1 cut(s) 1120
XapI RAATTY 4 cut(s) 133, 651, 1209, 1339
XceI RCATGY 1 cut(s) 1080
XspI CTAG 2 cut(s) 401, 684
ZraI GACGTC 2 cut(s) 55, 1046
ZrmI AGTACT 1 cut(s) 272
Zsp2I ATGCAT 1 cut(s) 1318
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.