Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0014426

Physical Location & Seq

Genomic Coordinates Reverse (-)

5328836 .. 5333344

Gene Structure 4509 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g09040.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGGCTGCTTGTGCTTTGCTGGGTGACAATGGCGACCATGTCAGCGGCAATGGAAGCAACAACAACAACAACAGTAGTGCTAGCCACAGCCCATTGAACTCCACCAGCCAAGGAAGCAGCGTCGTTGAGCAGCAGCAGCAGAACCCGGCTCGGTCGAAAATGGTGAGGAAGAGAATGGCGTCCGAGCTTGAAGTGCAGCCCAACTCAATCAGAAGCAGCAACAACAACAATAATGGTGATAATTATATGAGGGTTTCGCGTAACCGGAGCGTTATGCTAAATCCAAACCCGACCCATGACAAAGTCTCCAACTACTCCACCACTATGCTCAATCTACCAGTACCATCATCGTCCCTCATGACGTCAGGTGGTGGAGGTGGGGTTTTATCAACTGCTTCAGCTTCTTCTTCCTCTCCAGCCTGGGGTCCTATCGACCCCTTGTCCCTCCATCAGCATCCCATTCACCACACCCAGATCGCCGCCACCGCTCCTCTCCCCGCAGTCTGCGGCTTTTCAGGGCTGCCTCTCTTTCCGCCGGAGAGAACCGCCCCTTCAAATCAACCTAGTTCAACGCTCACTACCGTTGTTATGGACCATCAAGATAGCTCGGCCACGGCGTGGATCGACGGCATCATAAAAGACCTCATCAACAGCTCCACCAGCGTCTCCATTCCTCAGCTCATCCAGAACGTCAGGGAGATCATCTTCCCTTGCAACCCCAACCTCGCTTCCCTTCTCGAGTACCGCCTCCGCTCCATATCAGAACCGCCCCCGCCTCCGATTCCGGCCTTCAACAACAGAAGAAGAGACCAAGGTCCGGGGCTGAAGCTCAATATCGACTCCACCTCCATAAATGACGTCACGACCGTTTTCCCAACGGATAGCGGTAGTCACCATGTGATGAACAACCAGGAGTTGTACTTGAACTGGGGCGCCGCGACCACCCTACCCCAACAGCATCAGCCGCAGCAGCATCAACAACCCAATCCTACCTCCTCCCCTACTTGCAACGAAAGCAACCTCCAGCCTCAGCAGCACCACATTATTTCCCAGGCGGTCCAGCCACAACTACAACAACCGCAACCGCTTGATAAGCAGCCTCAACAAAACTCACCGTCCCCGGCCGCCGAGTCTCCCCAAGCTGCACCGCCATCAGCCACTCCAGCCCCAGCCACGCAGTCCCCGGCCGCACTACTTCGAGAGAAGAAGGAAGAGATGCGGCAGCAGCAGCGAGACGAGGAAGGACTGCACCTCCTCACCTTACTCCTGCAATGCGCCGAAGCGGTCTCCGCCGATAATTACGAAGAAGCGACCAAAATGTTGCTCGAGATTTCCGAGCTCTCGACTCCATTCGGCACCTCCGCGCAGCGCGTGGCGGCGTACTTCTCCGAGGCCATGTCAGCAAGACTAGTCAGCTCCTGTCTCGGAATCTACGCCTCCCTCCCTGTCTCGGCCGCACCGGTCACTCATTCACAGAAGCTCGTCTCGGCATTCCAAGTCTTCAACGGCATCTCCCCGTTCGTGAAGTTCTCCCACTTCACGGCCAACCAAGCCATTCAAGAAGCTTTCGAAAGAGAAGACCGGGTGCACATAGTGGATCTCGACATCATGCAAGGCCTACAATGGCCGGGGCTCTTCCACATTCTCGCCTCCCGCCCCGGTGGGCCACCCTACGTACGCCTCACTGGTCTCGGAACCTCCGTGGAGGCTCTAGAAGCCACCGGAAAGCGCCTAACCGACTTCGCCGATAAGCTAGGGCTTCCCTTCGAGTTCTTCCCGGTGGCGGAGAAGGTGGGCAGTTTGGACCCTGATCGACTCAACATAAGCAAGAGAGAGGCCGTCGCCGTCCACTGGCTGCAGCATTCTCTATACGACGTCACCGGCTCCGACGCCAACACGCTATGGCTTTTGCAGAGATTGGCACCAAAAGTGGTGACGGTAGTGGAGCAGGACTTGAGTCATGCCGGTTCTTTCCTGGGGAGGTTTGTGGAGGCCATACACTACTATTCGGCCTTGTTCGATTCTTTGGGTGCAAGCTACGGTGAAGAAAGCGAGGAGAGGCACGTCGTGGAGCAGCAGCTTTTGTCGAGGGAGATACGGAATGTTCTAGCCGTCGGAGGGCCGTCGAGGAGTGGAGAAGTCAAGTTCCATAATTGGAGGGAGAAGTTCCAGCAGAGTGGCTTCAGGGGCATTTCTTTGGCCGGAAATGCCGCTACGCAGGCAACTTTGCTGCTTGGGATGTTCCCTTCTGATGGGTACACATTGGTGGAGGACAATGGGACTCTCAAGCTTGGTTGGAAAGACCTTTGTTTGCTCACTGCTTCGGCTTGGAGACCACCTTATCATGCCACTACCAACCCCAACCTTCACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001708 GO:0003002 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008104 GO:0008150 GO:0008356 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009889 GO:0009956 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032507 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045165 GO:0045185 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051179 GO:0051235 GO:0051252 GO:0051301 GO:0051457 GO:0051641 GO:0051651 GO:0060255 GO:0065007 GO:0065008 GO:0070727 GO:0072595 GO:0080090 GO:0090610 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

792

Amino Acids

85.98

Weight (kDa)

5.97

Isoelectric Point (pI)

59.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	419 - 778	1.2e-130	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54220
fragaria_vesca	FvH4_6g09040
malus_domestica	MD04G1181500.v1.1 MD12G1196300.v1.1
prunus_persica	Prupe.6G300900_v2.0.a1
pyrus_communis	pycom04g16040 pycom12g18250
rosa_chinensis	RchiOBHm_Chr3g0459291
rosa_laevigata	RLG00000025096
rosa_multiflora	Rmu_sc0012999.1_g000002
rosa_roxburghii	Rroxscaffold_6G00420330
rosa_rugosa	Rorug03G0035100
rosa_samantha	Rh3AG092900 Rh3BG096000 Rh3CG097000 Rh3DG096600
rosa_wichuraiana	Rw3G007990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	3 cut(s)	365, 861, 1878
AccB1I	GGYRCC	3 cut(s)	932, 1355, 1921
AccB7I	CCANNNNNTGG	1 cut(s)	618
AccBSI	CCGCTC	2 cut(s)	488, 753
AccII	CGCG	4 cut(s)	259, 938, 1364, 1371
AclWI	GGATC	2 cut(s)	629, 1605
AcoI	YGGCCR	7 cut(s)	609, 1122, 1185, 1452, 1542, 1625, 2199
AcuI	CTGAAG	3 cut(s)	381, 845, 2167
AcyI	GRCGYC	6 cut(s)	179, 362, 858, 933, 1875, 1890
AdeI	CACNNNGTG	4 cut(s)	618, 898, 1594, 2068
AfaI	GTAC	6 cut(s)	342, 743, 920, 1382, 1677, 2258
AfiI	CCNNNNNNNGG	9 cut(s)	422, 618, 817, 1450, 1540, 1783, 1851, 2118, 2252
AgeI	ACCGGT	1 cut(s)	1459
AgsI	TTSAA	8 cut(s)	97, 191, 555, 570, 793, 925, 1504, 1559
AhdI	GACNNNNNGTC	1 cut(s)	439
AhlI	ACTAGT	1 cut(s)	1408
AjiI	CACGTC	1 cut(s)	2065
AjnI	CCWGG	4 cut(s)	419, 909, 1050, 1974
AleI	CACNNNNGTG	1 cut(s)	2264
Alw21I	GWGCWC	2 cut(s)	1341, 1590
Alw44I	GTGCAC	1 cut(s)	1586
AlwI	GGATC	2 cut(s)	629, 1605
AlwNI	CAGNNNCTG	1 cut(s)	1419
Ama87I	CYCGRG	2 cut(s)	737, 1325
ApaLI	GTGCAC	1 cut(s)	1586
AsiGI	ACCGGT	1 cut(s)	1459
AspLEI	GCGC	5 cut(s)	935, 1277, 1366, 1371, 1731
AspS9I	GGNCC	7 cut(s)	425, 592, 815, 1057, 1664, 1804, 2120
AsuC2I	CCSGG	8 cut(s)	146, 819, 1121, 1184, 1583, 1629, 1659, 1778
AsuII	TTCGAA	1 cut(s)	1569
AsuNHI	GCTAGC	1 cut(s)	80
AvaI	CYCGRG	2 cut(s)	737, 1325
AvaII	GGWCC	5 cut(s)	425, 592, 815, 1057, 1804
BaeGI	GKGCMC	1 cut(s)	1590
BanI	GGYRCC	3 cut(s)	932, 1355, 1921
BanII	GRGCYC	2 cut(s)	1341, 1635
BbsI	GAAGAC	2 cut(s)	1492, 1584
Bbv12I	GWGCWC	2 cut(s)	1341, 1590
BbvCI	CCTCAGC	2 cut(s)	675, 1029
BccI	CCATC	5 cut(s)	352, 456, 603, 1159, 2246
BceAI	ACGGC	8 cut(s)	630, 643, 1522, 1557, 1823, 1829, 2096, 2107
BciT130I	CCWGG	4 cut(s)	421, 911, 1052, 1976
BcnI	CCSGG	8 cut(s)	146, 819, 1121, 1184, 1583, 1629, 1659, 1778
BcuI	ACTAGT	1 cut(s)	1408
BfaI	CTAG	6 cut(s)	81, 564, 1409, 1712, 1754, 2108
BfmI	CTRYAG	1 cut(s)	1856
BfoI	RGCGCY	2 cut(s)	936, 1732
Bme18I	GGWCC	5 cut(s)	425, 592, 815, 1057, 1804
BmeRI	GACNNNNNGTC	1 cut(s)	439
BmeT110I	CYCGRG	2 cut(s)	737, 1325
BmgBI	CACGTC	1 cut(s)	2065
BmgT120I	GGNCC	7 cut(s)	425, 592, 815, 1057, 1664, 1804, 2120
BmiI	GGNNCC	7 cut(s)	426, 934, 1357, 1696, 1806, 1885, 1923
BmrI	ACTGGG	1 cut(s)	937
BmsI	GCATC	6 cut(s)	463, 639, 967, 982, 1206, 1518
BmtI	GCTAGC	1 cut(s)	84
BmuI	ACTGGG	1 cut(s)	937
BoxI	GACNNNNGTC	2 cut(s)	813, 1956
BpiI	GAAGAC	2 cut(s)	1492, 1584
BpmI	CTGGAG	3 cut(s)	399, 1007, 1146
Bpu10I	CCTNAGC	2 cut(s)	675, 1029
Bpu14I	TTCGAA	1 cut(s)	1569
BpuEI	CTTGAG	2 cut(s)	1975, 2270
BpuMI	CCSGG	8 cut(s)	146, 819, 1121, 1184, 1583, 1629, 1659, 1778
BsaAI	YACGTR	1 cut(s)	1675
BsaHI	GRCGYC	6 cut(s)	179, 362, 858, 933, 1875, 1890
BsaI	GGTCTC	4 cut(s)	801, 1291, 1694, 2326
BsaWI	WCCGGW	3 cut(s)	264, 1459, 1721
Bsc4I	CCNNNNNNNGG	9 cut(s)	422, 618, 817, 1450, 1540, 1783, 1851, 2118, 2252
Bse118I	RCCGGY	3 cut(s)	1459, 1880, 1964
Bse1I	ACTGG	4 cut(s)	338, 932, 1690, 1856
Bse3DI	GCAATG	2 cut(s)	55, 1277
BseBI	CCWGG	4 cut(s)	421, 911, 1052, 1976
BseGI	GGATG	3 cut(s)	454, 681, 2244
BseLI	CCNNNNNNNGG	9 cut(s)	422, 618, 817, 1450, 1540, 1783, 1851, 2118, 2252
BseMI	GCAATG	2 cut(s)	55, 1277
BseMII	CTCAG	2 cut(s)	689, 1043
BseNI	ACTGG	4 cut(s)	338, 932, 1690, 1856
BseRI	GAGGAG	5 cut(s)	480, 985, 1244, 2069, 2143
BseSI	GKGCMC	1 cut(s)	1590
BseX3I	CGGCCG	3 cut(s)	1122, 1185, 1452
BseYI	CCCAGC	2 cut(s)	19, 1168
BsgI	GTGCAG	3 cut(s)	215, 1128, 1232
Bsh1236I	CGCG	4 cut(s)	259, 938, 1364, 1371
Bsh1285I	CGRYCG	5 cut(s)	155, 867, 1125, 1188, 1455
BshNI	GGYRCC	3 cut(s)	932, 1355, 1921
BshTI	ACCGGT	1 cut(s)	1459
BsiEI	CGRYCG	5 cut(s)	155, 867, 1125, 1188, 1455
BsiHKAI	GWGCWC	2 cut(s)	1341, 1590
BsiHKCI	CYCGRG	2 cut(s)	737, 1325
BsiWI	CGTACG	1 cut(s)	1675
BslFI	GGGAC	5 cut(s)	337, 427, 1102, 1165, 2293
BslI	CCNNNNNNNGG	9 cut(s)	422, 618, 817, 1450, 1540, 1783, 1851, 2118, 2252
BsmBI	CGTCTC	3 cut(s)	670, 1227, 1489
BsmFI	GGGAC	5 cut(s)	337, 427, 1102, 1165, 2293
BsmI	GAATGC	2 cut(s)	1490, 1861
Bso31I	GGTCTC	4 cut(s)	801, 1291, 1694, 2326
BsoBI	CYCGRG	2 cut(s)	737, 1325
Bsp119I	TTCGAA	1 cut(s)	1569
Bsp1286I	GDGCHC	3 cut(s)	1341, 1590, 1635
Bsp143I	GATC	5 cut(s)	474, 621, 699, 1597, 1810
BspCNI	CTCAG	2 cut(s)	688, 1042
BspFNI	CGCG	4 cut(s)	259, 938, 1364, 1371
BspHI	TCATGA	1 cut(s)	357
BspLI	GGNNCC	7 cut(s)	426, 934, 1357, 1696, 1806, 1885, 1923
BspMAI	CTGCAG	1 cut(s)	1860
BspOI	GCTAGC	1 cut(s)	84
BspPI	GGATC	2 cut(s)	629, 1605
BspQI	GCTCTTC	1 cut(s)	1640
BspT104I	TTCGAA	1 cut(s)	1569
BspT107I	GGYRCC	3 cut(s)	932, 1355, 1921
BspTNI	GGTCTC	4 cut(s)	801, 1291, 1694, 2326
BsrBI	CCGCTC	2 cut(s)	488, 753
BsrDI	GCAATG	2 cut(s)	55, 1277
BsrFI	RCCGGY	3 cut(s)	1459, 1880, 1964
BsrI	ACTGG	4 cut(s)	338, 932, 1690, 1856
BssAI	RCCGGY	3 cut(s)	1459, 1880, 1964
BssMI	GATC	5 cut(s)	474, 621, 699, 1597, 1810
BssNI	GRCGYC	6 cut(s)	179, 362, 858, 933, 1875, 1890
BssT1I	CCWWGG	2 cut(s)	109, 811
Bst2UI	CCWGG	4 cut(s)	421, 911, 1052, 1976
Bst4CI	ACNGT	6 cut(s)	74, 583, 868, 1116, 1939, 2042
Bst6I	CTCTTC	4 cut(s)	164, 799, 1206, 1640
BstACI	GRCGYC	6 cut(s)	179, 362, 858, 933, 1875, 1890
BstBAI	YACGTR	1 cut(s)	1675
BstBI	TTCGAA	1 cut(s)	1569
BstC8I	GCNNGC	3 cut(s)	82, 2035, 2220
BstDEI	CTNAG	2 cut(s)	675, 1029
BstDSI	CCRYGG	2 cut(s)	612, 1701
BstF5I	GGATG	3 cut(s)	454, 681, 2244
BstFNI	CGCG	4 cut(s)	259, 938, 1364, 1371
BstH2I	RGCGCY	2 cut(s)	936, 1732
BstHHI	GCGC	5 cut(s)	935, 1277, 1366, 1371, 1731
BstKTI	GATC	5 cut(s)	477, 624, 702, 1600, 1813
BstMBI	GATC	5 cut(s)	474, 621, 699, 1597, 1810
BstMCI	CGRYCG	5 cut(s)	155, 867, 1125, 1188, 1455
BstNI	CCWGG	4 cut(s)	421, 911, 1052, 1976
BstPAI	GACNNNNGTC	2 cut(s)	813, 1956
BstSFI	CTRYAG	1 cut(s)	1856
BstSLI	GKGCMC	1 cut(s)	1590
BstSNI	TACGTA	1 cut(s)	1675
BstUI	CGCG	4 cut(s)	259, 938, 1364, 1371
BstV2I	GAAGAC	2 cut(s)	1492, 1584
BstX2I	RGATCY	1 cut(s)	1597
BstXI	CCANNNNNNTGG	1 cut(s)	2177
BstYI	RGATCY	1 cut(s)	1597
BstZI	CGGCCG	3 cut(s)	1122, 1185, 1452
BtgI	CCRYGG	2 cut(s)	612, 1701
BtrI	CACGTC	1 cut(s)	2065
BtsCI	GGATG	3 cut(s)	454, 681, 2244
BtsI	GCAGTG	1 cut(s)	2316
BtsIMutI	CAGTG	3 cut(s)	1683, 1849, 2316
Cac8I	GCNNGC	3 cut(s)	82, 2035, 2220
CaiI	CAGNNNCTG	1 cut(s)	1419
CciI	TCATGA	1 cut(s)	357
CfoI	GCGC	5 cut(s)	935, 1277, 1366, 1371, 1731
Cfr10I	RCCGGY	3 cut(s)	1459, 1880, 1964
Cfr13I	GGNCC	7 cut(s)	425, 592, 815, 1057, 1664, 1804, 2120
CseI	GACGC	4 cut(s)	109, 168, 652, 1898
Csp6I	GTAC	6 cut(s)	341, 742, 919, 1381, 1676, 2257
CspAI	ACCGGT	1 cut(s)	1459
CviAII	CATG	8 cut(s)	38, 296, 358, 896, 1396, 1609, 1961, 2345
CviQI	GTAC	6 cut(s)	341, 742, 919, 1381, 1676, 2257
DdeI	CTNAG	2 cut(s)	675, 1029
DinI	GGCGCC	1 cut(s)	934
DpnI	GATC	5 cut(s)	476, 623, 701, 1599, 1812
DpnII	GATC	5 cut(s)	474, 621, 699, 1597, 1810
DraIII	CACNNNGTG	4 cut(s)	618, 898, 1594, 2068
DriI	GACNNNNNGTC	1 cut(s)	439
EaeI	YGGCCR	7 cut(s)	609, 1122, 1185, 1452, 1542, 1625, 2199
EagI	CGGCCG	3 cut(s)	1122, 1185, 1452
Eam1104I	CTCTTC	4 cut(s)	164, 799, 1206, 1640
Eam1105I	GACNNNNNGTC	1 cut(s)	439
EarI	CTCTTC	4 cut(s)	164, 799, 1206, 1640
EciI	GGCGGA	3 cut(s)	522, 1279, 1799
Ecl136II	GAGCTC	1 cut(s)	1339
EclXI	CGGCCG	3 cut(s)	1122, 1185, 1452
Eco105I	TACGTA	1 cut(s)	1675
Eco130I	CCWWGG	2 cut(s)	109, 811
Eco147I	AGGCCT	1 cut(s)	1617
Eco24I	GRGCYC	2 cut(s)	1341, 1635
Eco31I	GGTCTC	4 cut(s)	801, 1291, 1694, 2326
Eco47I	GGWCC	5 cut(s)	425, 592, 815, 1057, 1804
Eco52I	CGGCCG	3 cut(s)	1122, 1185, 1452
Eco53kI	GAGCTC	1 cut(s)	1339
Eco57I	CTGAAG	3 cut(s)	381, 845, 2167
Eco88I	CYCGRG	2 cut(s)	737, 1325
EcoICRI	GAGCTC	1 cut(s)	1339
EcoO109I	RGGNCCY	1 cut(s)	425
EcoRII	CCWGG	4 cut(s)	419, 909, 1050, 1974
EcoT14I	CCWWGG	2 cut(s)	109, 811
EcoT38I	GRGCYC	2 cut(s)	1341, 1635
EgeI	GGCGCC	1 cut(s)	934
EheI	GGCGCC	1 cut(s)	934
ErhI	CCWWGG	2 cut(s)	109, 811
Esp3I	CGTCTC	3 cut(s)	670, 1227, 1489
FaeI	CATG	8 cut(s)	41, 299, 361, 899, 1399, 1612, 1964, 2348
FaqI	GGGAC	5 cut(s)	337, 427, 1102, 1165, 2293
FatI	CATG	8 cut(s)	37, 295, 357, 895, 1395, 1608, 1960, 2344
FauI	CCCGC	3 cut(s)	505, 780, 1661
FokI	GGATG	3 cut(s)	441, 668, 2251
FriOI	GRGCYC	2 cut(s)	1341, 1635
FspBI	CTAG	6 cut(s)	81, 564, 1409, 1712, 1754, 2108
GlaI	GCGC	5 cut(s)	934, 1276, 1365, 1370, 1730
GsaI	CCCAGC	2 cut(s)	23, 1172
GsuI	CTGGAG	3 cut(s)	399, 1007, 1146
HaeII	RGCGCY	2 cut(s)	936, 1732
HgaI	GACGC	4 cut(s)	109, 168, 652, 1898
HhaI	GCGC	5 cut(s)	935, 1277, 1366, 1371, 1731
Hin1I	GRCGYC	6 cut(s)	179, 362, 858, 933, 1875, 1890
Hin1II	CATG	8 cut(s)	41, 299, 361, 899, 1399, 1612, 1964, 2348
Hin6I	GCGC	5 cut(s)	933, 1275, 1364, 1369, 1729
HinP1I	GCGC	5 cut(s)	933, 1275, 1364, 1369, 1729
HindIII	AAGCTT	2 cut(s)	1563, 2288
HinfI	GANTC	9 cut(s)	781, 839, 1130, 1345, 1428, 1815, 1957, 2021, 2281
Hpy166II	GTNNAC	3 cut(s)	1588, 1849, 2259
Hpy8I	GTNNAC	3 cut(s)	1588, 1849, 2259
Hpy99I	CGWCG	8 cut(s)	125, 629, 1844, 1877, 1892, 2069, 2117, 2128
HpyAV	CCTTC	9 cut(s)	561, 743, 799, 1201, 1235, 1774, 1783, 2256, 2375
HpyCH4III	ACNGT	6 cut(s)	74, 583, 868, 1116, 1939, 2042
HpyCH4IV	ACGT	6 cut(s)	362, 690, 858, 1674, 1875, 2064
HpyF3I	CTNAG	2 cut(s)	675, 1029
HpySE526I	ACGT	6 cut(s)	362, 690, 858, 1674, 1875, 2064
Hsp92I	GRCGYC	6 cut(s)	179, 362, 858, 933, 1875, 1890
Hsp92II	CATG	8 cut(s)	41, 299, 361, 899, 1399, 1612, 1964, 2348
HspAI	GCGC	5 cut(s)	933, 1275, 1364, 1369, 1729
KasI	GGCGCC	1 cut(s)	932
Kzo9I	GATC	5 cut(s)	474, 621, 699, 1597, 1810
LguI	GCTCTTC	1 cut(s)	1640
LmnI	GCTCC	8 cut(s)	267, 493, 659, 758, 1421, 1889, 1945, 2071
LweI	GCATC	6 cut(s)	463, 639, 967, 982, 1206, 1518
MaeI	CTAG	6 cut(s)	81, 564, 1409, 1712, 1754, 2108
MaeII	ACGT	6 cut(s)	362, 690, 858, 1674, 1875, 2064
MaeIII	GTNAC	7 cut(s)	23, 260, 859, 890, 1462, 1876, 1933
MalI	GATC	5 cut(s)	476, 623, 701, 1599, 1812
MbiI	CCGCTC	2 cut(s)	488, 753
MboI	GATC	5 cut(s)	474, 621, 699, 1597, 1810
MflI	RGATCY	1 cut(s)	1597
MhlI	GDGCHC	3 cut(s)	1341, 1590, 1635
MluCI	AATT	3 cut(s)	241, 1297, 2152
Mly113I	GGCGCC	1 cut(s)	933
MlyI	GAGTC	6 cut(s)	833, 1139, 1339, 1809, 1966, 2275
MmeI	TCCRAC	4 cut(s)	333, 1911, 2095, 2276
MslI	CAYNNNNRTG	2 cut(s)	323, 2264
MspA1I	CMGCKG	1 cut(s)	45
MteI	GCGCNGCGC	1 cut(s)	1367
Mva1269I	GAATGC	2 cut(s)	1490, 1861
MvaI	CCWGG	4 cut(s)	421, 911, 1052, 1976
MvnI	CGCG	4 cut(s)	259, 938, 1364, 1371
NarI	GGCGCC	1 cut(s)	933
NciI	CCSGG	8 cut(s)	146, 819, 1121, 1184, 1583, 1629, 1659, 1778
NdeII	GATC	5 cut(s)	474, 621, 699, 1597, 1810
NheI	GCTAGC	1 cut(s)	80
NlaIII	CATG	8 cut(s)	41, 299, 361, 899, 1399, 1612, 1964, 2348
NlaIV	GGNNCC	7 cut(s)	426, 934, 1357, 1696, 1806, 1885, 1923
NmeAIII	GCCGAG	4 cut(s)	587, 1153, 1430, 1466
NmuCI	GTSAC	6 cut(s)	23, 859, 890, 1462, 1876, 1933
NspV	TTCGAA	1 cut(s)	1569
OliI	CACNNNNGTG	1 cut(s)	2264
PaeR7I	CTCGAG	2 cut(s)	737, 1325
PagI	TCATGA	1 cut(s)	357
PceI	AGGCCT	1 cut(s)	1617
PciSI	GCTCTTC	1 cut(s)	1640
PcsI	WCGNNNNNNNCGW	4 cut(s)	614, 864, 1332, 1698
PctI	GAATGC	2 cut(s)	1490, 1861
PfeI	GAWTC	3 cut(s)	781, 1428, 2021
Pfl23II	CGTACG	1 cut(s)	1675
PflFI	GACNNNGTC	2 cut(s)	38, 302
PflMI	CCANNNNNTGG	1 cut(s)	618
PinAI	ACCGGT	1 cut(s)	1459
PleI	GAGTC	6 cut(s)	833, 1138, 1339, 1809, 1965, 2275
PluTI	GGCGCC	1 cut(s)	936
PpsI	GAGTC	6 cut(s)	833, 1138, 1339, 1809, 1965, 2275
Ppu21I	YACGTR	1 cut(s)	1675
PpuMI	RGGWCCY	1 cut(s)	425
PshAI	GACNNNNGTC	2 cut(s)	813, 1956
Psp124BI	GAGCTC	1 cut(s)	1341
Psp5II	RGGWCCY	1 cut(s)	425
Psp6I	CCWGG	4 cut(s)	419, 909, 1050, 1974
PspFI	CCCAGC	2 cut(s)	19, 1168
PspGI	CCWGG	4 cut(s)	419, 909, 1050, 1974
PspLI	CGTACG	1 cut(s)	1675
PspN4I	GGNNCC	7 cut(s)	426, 934, 1357, 1696, 1806, 1885, 1923
PspPI	GGNCC	7 cut(s)	425, 592, 815, 1057, 1664, 1804, 2120
PspPPI	RGGWCCY	1 cut(s)	425
PstI	CTGCAG	1 cut(s)	1860
PstNI	CAGNNNCTG	1 cut(s)	1419
PsuI	RGATCY	1 cut(s)	1597
PsyI	GACNNNGTC	2 cut(s)	38, 302
RsaI	GTAC	6 cut(s)	342, 743, 920, 1382, 1677, 2258
RsaNI	GTAC	6 cut(s)	341, 742, 919, 1381, 1676, 2257
RseI	CAYNNNNRTG	2 cut(s)	323, 2264
SacI	GAGCTC	1 cut(s)	1341
SapI	GCTCTTC	1 cut(s)	1640
Sau3AI	GATC	5 cut(s)	474, 621, 699, 1597, 1810
Sau96I	GGNCC	7 cut(s)	425, 592, 815, 1057, 1664, 1804, 2120
SchI	GAGTC	6 cut(s)	833, 1139, 1339, 1809, 1966, 2275
SduI	GDGCHC	3 cut(s)	1341, 1590, 1635
SfaNI	GCATC	6 cut(s)	463, 639, 967, 982, 1206, 1518
SfcI	CTRYAG	1 cut(s)	1856
SfoI	GGCGCC	1 cut(s)	934
Sfr274I	CTCGAG	2 cut(s)	737, 1325
SfuI	TTCGAA	1 cut(s)	1569
SinI	GGWCC	5 cut(s)	425, 592, 815, 1057, 1804
SlaI	CTCGAG	2 cut(s)	737, 1325
SmiMI	CAYNNNNRTG	2 cut(s)	323, 2264
SmlI	CTYRAG	4 cut(s)	737, 1325, 1954, 2285
SmoI	CTYRAG	4 cut(s)	737, 1325, 1954, 2285
SnaBI	TACGTA	1 cut(s)	1675
SpeI	ACTAGT	1 cut(s)	1408
Sse9I	AATT	3 cut(s)	241, 1297, 2152
SseBI	AGGCCT	1 cut(s)	1617
SspDI	GGCGCC	1 cut(s)	932
SspMI	CTAG	6 cut(s)	81, 564, 1409, 1712, 1754, 2108
SstI	GAGCTC	1 cut(s)	1341
StuI	AGGCCT	1 cut(s)	1617
StyI	CCWWGG	2 cut(s)	109, 811
TaaI	ACNGT	6 cut(s)	74, 583, 868, 1116, 1939, 2042
TaiI	ACGT	6 cut(s)	365, 693, 861, 1677, 1878, 2067
TaqII	GACCGA	1 cut(s)	141
TasI	AATT	3 cut(s)	241, 1297, 2152
TatI	WGTACW	1 cut(s)	918
TfiI	GAWTC	3 cut(s)	781, 1428, 2021
TscAI	CASTG	3 cut(s)	1690, 1856, 2323
TseFI	GTSAC	6 cut(s)	23, 859, 890, 1462, 1876, 1933
Tsp45I	GTSAC	6 cut(s)	23, 859, 890, 1462, 1876, 1933
TspDTI	ATGAA	1 cut(s)	917
TspGWI	ACGGA	3 cut(s)	893, 1690, 2113
TspRI	CASTG	3 cut(s)	1690, 1856, 2323
Tth111I	GACNNNGTC	2 cut(s)	38, 302
Van91I	CCANNNNNTGG	1 cut(s)	618
VneI	GTGCAC	1 cut(s)	1586
VpaK11BI	GGWCC	5 cut(s)	425, 592, 815, 1057, 1804
XbaI	TCTAGA	1 cut(s)	1711
XhoI	CTCGAG	2 cut(s)	737, 1325
XspI	CTAG	6 cut(s)	81, 564, 1409, 1712, 1754, 2108
ZraI	GACGTC	3 cut(s)	363, 859, 1876

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.