Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0014426

Physical Location & Seq

Genomic Coordinates Reverse (-)

7421121 .. 7424720

Gene Structure 3600 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G007990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2397 bp

ATGGCTGCTTGTGCTTTGCTGGGTGACAATGGCGACCTTGTCAGCGGCAATGGAAGCAATAACAACAACAACAACAGCAGTGCCAGCCACAGCCCATTGAACTCCAACAGCCAAGGCAGCAGCGTGGTCGAGCAGCAGAACCCGGTTCGGTCGAAAATGGTGAGGAAGAGAATGGCTTCCGAGATTGAAGTGCAGCCCACCAACAACACCAACCCAATCAGAATTGGCAGCAGCAACAATAACGGTGATAATTATATGAGGGTTTCGCGTAATCGGAGCGTTATGCTCAATCCAAACCCGACCCATGACAAAGTGAATATGGTCTCCAACTACTCCACCACTATGCTCAATCTACCAGTACCATCATCGTCCAACAATTTGACTACCACGCTCATGACGTCAGGAGGTGGTGGGGTTTTATCAACTGCTTCCGCTTCTTCTTCCCCTCCAAGCTGGGGTCCTATCGATCCCTTGTCGCTCCATCACCCGATTCACCAGACCCAGATCGCAGCAACCACTCCTCCTCCCGCCGTCTGCGGCTTTTCGGGGCTCCCTCTCTTCCCACCGGAAAGAACTTCTCCTCCGACTCATACTAGCACCACGCTTTCTACCGTTATGGATCAAGACAGCTCCGCCACGGCCTGGATCGACGGCATCATAAAAGACCTCATCCACAGCTCCACCAACGTCTCCATTCCTCAGCTCATCCAGAACGTCCGAGAGATAATCTTCCCTTGCAATCCCAACCTCGCTTCGCTGCTCGAGTACCGCCTCCGCTCCATATCCGAGCCGCCCCCGCCTCCGATCCCACTCTTCAACAGAAGAAGAGACCAAGGTCCCGGGCTGCAGCTGAATCTCGACTCCAACTCCTCCGGCATAAATGACGTCACTGTTTTCCCGTCTTCAACCCCCAGCGGTCACTCTGGTCATCACCATGTGATGAACCAGGAGTTGTTTTTGAACTGGGGAGACACCCTACCCCAACAACAGCAGCAACAACCCAACCCTACATCTTCCCCTACTTGCAACGAAAGCAACATCCAGGTTCAACAACACCACATTTCCCAGGTGCTTCACCCACAGCAACAAACACTAGATAAGCAGCAGCAGCAACAACAAAACTCTCCATCCCCGGCCGCCGAGTCTACGCAAACCGCCACTGCACCACCACCGCCATCTACAACAGCCCCAGCCACGCCGTCCCCGGCGGTACTAATGCGAGAGAAGAAAGAAGAGATGCGGCAGCAGAAGCGAGACGAAGAGGGACTGCACCTGCTCACCTTACTCCTCCAATGCGCCGAAGCTGTGTCCGCAGATAACCTTGAAGAAGCAACCAAAATGTTACTCGAGATTTCCGAGCTCTCAACCCCGTTCGGCACCTCCGCGCAGCGCGTGGCGGCCTACTTCTCCGAGGCCATGTCAGCCAGACTAGTCAGCTCCTGTCTCGGATTCTACGCCTCCCTCCCGGTCTCCGCCGCTCCCATCACCCATTCCCAGAAGCTCGTCTCTGCCTTCCAAGTCTTCAACGGAATCAGCCCGTTCGTCAAGTTCTCCCACTTCACGGCCAACCAAGCCATCCAGGAAGCATTCGAAAGAGAAGACCGGGTGCACATAGTAGATCTCGACATAATGCAAGGCCTACAATGGCCGGGGCTGTTCCACATTCTCGCCTCCCGGCCCGGTGGGCCGCCCTACGTCCGCCTCACCGGTCTAGGAACCTCCATGGACGCTCTAGAAGCCACCGGAAAACGCTTAACCGACTTCGCCGACAAGCTAGGGCTTCCGTTCGAGTTCTTTCCCGTGGCGGAGAAGGTAGGCAGTTTGGACCCTGACCGGCTCAACATAAGCAAGAGAGAGGCCGTCGCCGTCCACTGGCTGCAGCATTCTCTTTACGACGTCACCGGCTCCGACGCTAACACGCTCTGGCTTTTGCAGAGATTGGCACCGAAAGTAGTGACGGTAGTGGAGCAGGACTTGAGTCACGCCGGTTCATTTCTAGGGAGGTTTGTGGAGGCCATACACTACTACTCGGCCTTGTTCGACTCTTTGAGTGCAAGCTACGGTGAAGAAAGCGAGGAGAGGCACGTCGTGGAGCAGCAGCTATTGTCGAGGGAGATTCGGAATGTTCTAGCCGTGGGAGGCCCGTCGAGGAGTGGAGAAGTGAAGTTCCATAACTGGAGGGAGAAGTTCCAGCAGAGTGGGTTCAGGGGGATTTCTTTGGCGGGAAATGCAGCGACTCAGGCAACCTTGCTGCTTGGGATGTTCCCTTCTGATGGGTACACATTGGTGGAAGACAATGGGACTCTTAAGCTTGGTTGGAAAGACCTTTGTTTGCTGACTGCTTCGGCTTGGAGACCACCTTATCTTGCTACTACCAACCCCAACCTTCACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001708 GO:0003002 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008104 GO:0008150 GO:0008356 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009889 GO:0009956 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032507 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045165 GO:0045185 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051179 GO:0051235 GO:0051252 GO:0051301 GO:0051457 GO:0051641 GO:0051651 GO:0060255 GO:0065007 GO:0065008 GO:0070727 GO:0072595 GO:0080090 GO:0090610 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

798

Amino Acids

86.89

Weight (kDa)

5.95

Isoelectric Point (pI)

56.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	426 - 785	1.7e-130	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54220
fragaria_vesca	FvH4_6g09040
malus_domestica	MD04G1181500.v1.1 MD12G1196300.v1.1
prunus_persica	Prupe.6G300900_v2.0.a1
pyrus_communis	pycom04g16040 pycom12g18250
rosa_chinensis	RchiOBHm_Chr3g0459291
rosa_laevigata	RLG00000025096
rosa_multiflora	Rmu_sc0012999.1_g000002
rosa_roxburghii	Rroxscaffold_6G00420330
rosa_rugosa	Rorug03G0035100
rosa_samantha	Rh3AG092900 Rh3BG096000 Rh3CG097000 Rh3DG096600
rosa_wichuraiana	Rw3G007990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1281
AatII	GACGTC	3 cut(s)	401, 888, 1899
Acc36I	ACCTGC	1 cut(s)	1281
AccB1I	GGYRCC	2 cut(s)	1376, 1942
AccB7I	CCANNNNNTGG	1 cut(s)	642
AccBSI	CCGCTC	2 cut(s)	777, 1478
AccI	GTMKAC	1 cut(s)	1145
AccII	CGCG	3 cut(s)	268, 1385, 1392
AclWI	GGATC	4 cut(s)	461, 627, 653, 799
AcoI	YGGCCR	3 cut(s)	1134, 1563, 1646
AcyI	GRCGYC	3 cut(s)	398, 885, 1896
AdeI	CACNNNGTG	2 cut(s)	937, 2089
AfaI	GTAC	4 cut(s)	360, 767, 1212, 2279
AfiI	CCNNNNNNNGG	5 cut(s)	455, 642, 1561, 1872, 2273
AflII	CTTAAG	1 cut(s)	2306
AgeI	ACCGGT	1 cut(s)	1706
AgsI	TTSAA	8 cut(s)	100, 188, 817, 906, 961, 1049, 1325, 1525
AhlI	ACTAGT	1 cut(s)	1429
AjiI	CACGTC	1 cut(s)	2086
AjnI	CCWGG	5 cut(s)	641, 945, 1041, 1065, 1578
AleI	CACNNNNGTG	1 cut(s)	2285
AloI	GAACNNNNNNTCC	2 cut(s)	565, 597
Alw21I	GWGCWC	2 cut(s)	1362, 1611
Alw26I	GTCTC	9 cut(s)	328, 694, 822, 963, 1248, 1448, 1474, 1510, 2347
Alw44I	GTGCAC	1 cut(s)	1607
AlwI	GGATC	4 cut(s)	461, 627, 653, 799
AlwNI	CAGNNNCTG	1 cut(s)	1440
Ama87I	CYCGRG	3 cut(s)	761, 839, 1346
ApaLI	GTGCAC	1 cut(s)	1607
AsiGI	ACCGGT	1 cut(s)	1706
Asp700I	GAANNNNTTC	1 cut(s)	175
AspLEI	GCGC	3 cut(s)	1298, 1387, 1392
AspS9I	GGNCC	6 cut(s)	458, 836, 1677, 1685, 1825, 2141
AsuII	TTCGAA	1 cut(s)	1590
AvaI	CYCGRG	3 cut(s)	761, 839, 1346
AvaII	GGWCC	3 cut(s)	458, 836, 1825
BaeGI	GKGCMC	1 cut(s)	1611
BanI	GGYRCC	2 cut(s)	1376, 1942
BanII	GRGCYC	2 cut(s)	552, 1362
BbsI	GAAGAC	4 cut(s)	894, 1513, 1605, 2298
Bbv12I	GWGCWC	2 cut(s)	1362, 1611
BbvCI	CCTCAGC	1 cut(s)	699
BccI	CCATC	7 cut(s)	370, 489, 1135, 1183, 1490, 1583, 2267
BceAI	ACGGC	8 cut(s)	515, 654, 667, 1183, 1578, 1844, 1850, 2117
BcgI	CGANNNNNNTGC	2 cut(s)	109, 143
BciT130I	CCWGG	5 cut(s)	643, 947, 1043, 1067, 1580
BcoDI	GTCTC	9 cut(s)	328, 694, 822, 963, 1248, 1448, 1474, 1510, 2347
BcuI	ACTAGT	1 cut(s)	1429
BfaI	CTAG	8 cut(s)	594, 1094, 1430, 1712, 1733, 1775, 1997, 2129
BfmI	CTRYAG	2 cut(s)	845, 1877
BfrI	CTTAAG	1 cut(s)	2306
BfuAI	ACCTGC	1 cut(s)	1281
BglI	GCCNNNNNGGC	1 cut(s)	1684
BglII	AGATCT	1 cut(s)	1618
Bme18I	GGWCC	3 cut(s)	458, 836, 1825
BmeT110I	CYCGRG	3 cut(s)	761, 839, 1346
BmgBI	CACGTC	1 cut(s)	2086
BmgT120I	GGNCC	6 cut(s)	458, 836, 1677, 1685, 1825, 2141
BmiI	GGNNCC	8 cut(s)	459, 551, 838, 1378, 1717, 1827, 1906, 1944
BmrI	ACTGGG	1 cut(s)	973
BmsI	GCATC	2 cut(s)	663, 1227
BmuI	ACTGGG	1 cut(s)	973
BoxI	GACNNNNGTC	2 cut(s)	834, 1977
BpiI	GAAGAC	4 cut(s)	894, 1513, 1605, 2298
BpmI	CTGGAG	1 cut(s)	2197
Bpu10I	CCTNAGC	1 cut(s)	699
Bpu14I	TTCGAA	1 cut(s)	1590
BpuEI	CTTGAG	1 cut(s)	1996
Bsa29I	ATCGAT	1 cut(s)	465
BsaHI	GRCGYC	3 cut(s)	398, 885, 1896
BsaI	GGTCTC	4 cut(s)	328, 822, 1474, 2347
BsaWI	WCCGGW	3 cut(s)	565, 1706, 1742
BsaXI	ACNNNNNCTCC	8 cut(s)	505, 508, 535, 538, 565, 595, 851, 881
Bsc4I	CCNNNNNNNGG	5 cut(s)	455, 642, 1561, 1872, 2273
Bse118I	RCCGGY	4 cut(s)	1706, 1833, 1901, 1985
Bse1I	ACTGG	4 cut(s)	356, 968, 1877, 2180
Bse3DI	GCAATG	1 cut(s)	55
BseBI	CCWGG	5 cut(s)	643, 947, 1043, 1067, 1580
BseCI	ATCGAT	1 cut(s)	465
BseGI	GGATG	6 cut(s)	669, 705, 1038, 1127, 1575, 2265
BseLI	CCNNNNNNNGG	5 cut(s)	455, 642, 1561, 1872, 2273
BseMI	GCAATG	1 cut(s)	55
BseMII	CTCAG	2 cut(s)	713, 2252
BseNI	ACTGG	4 cut(s)	356, 968, 1877, 2180
BseRI	GAGGAG	7 cut(s)	510, 513, 570, 859, 1277, 2090, 2164
BseSI	GKGCMC	1 cut(s)	1611
BseX3I	CGGCCG	1 cut(s)	1134
BseYI	CCCAGC	4 cut(s)	19, 453, 911, 1189
BsgI	GTGCAG	3 cut(s)	212, 1146, 1253
Bsh1236I	CGCG	3 cut(s)	268, 1385, 1392
Bsh1285I	CGRYCG	2 cut(s)	152, 1137
BshNI	GGYRCC	2 cut(s)	1376, 1942
BshTI	ACCGGT	1 cut(s)	1706
BshVI	ATCGAT	1 cut(s)	465
BsiEI	CGRYCG	2 cut(s)	152, 1137
BsiHKAI	GWGCWC	2 cut(s)	1362, 1611
BsiHKCI	CYCGRG	3 cut(s)	761, 839, 1346
BslFI	GGGAC	4 cut(s)	822, 1186, 1278, 2314
BslI	CCNNNNNNNGG	5 cut(s)	455, 642, 1561, 1872, 2273
BsmAI	GTCTC	9 cut(s)	328, 694, 822, 963, 1248, 1448, 1474, 1510, 2347
BsmBI	CGTCTC	3 cut(s)	694, 1248, 1510
BsmFI	GGGAC	4 cut(s)	822, 1186, 1278, 2314
BsmI	GAATGC	2 cut(s)	1586, 1882
Bso31I	GGTCTC	4 cut(s)	328, 822, 1474, 2347
BsoBI	CYCGRG	3 cut(s)	761, 839, 1346
Bsp119I	TTCGAA	1 cut(s)	1590
Bsp1286I	GDGCHC	3 cut(s)	552, 1362, 1611
Bsp143I	GATC	6 cut(s)	466, 504, 619, 645, 804, 1618
Bsp19I	CCATGG	1 cut(s)	1722
BspCNI	CTCAG	2 cut(s)	712, 2251
BspDI	ATCGAT	1 cut(s)	465
BspFNI	CGCG	3 cut(s)	268, 1385, 1392
BspHI	TCATGA	1 cut(s)	393
BspLI	GGNNCC	8 cut(s)	459, 551, 838, 1378, 1717, 1827, 1906, 1944
BspMAI	CTGCAG	2 cut(s)	849, 1881
BspMI	ACCTGC	1 cut(s)	1281
BspPI	GGATC	4 cut(s)	461, 627, 653, 799
BspT104I	TTCGAA	1 cut(s)	1590
BspT107I	GGYRCC	2 cut(s)	1376, 1942
BspTI	CTTAAG	1 cut(s)	2306
BspTNI	GGTCTC	4 cut(s)	328, 822, 1474, 2347
BsrBI	CCGCTC	2 cut(s)	777, 1478
BsrDI	GCAATG	1 cut(s)	55
BsrFI	RCCGGY	4 cut(s)	1706, 1833, 1901, 1985
BsrI	ACTGG	4 cut(s)	356, 968, 1877, 2180
BssAI	RCCGGY	4 cut(s)	1706, 1833, 1901, 1985
BssMI	GATC	6 cut(s)	466, 504, 619, 645, 804, 1618
BssNI	GRCGYC	3 cut(s)	398, 885, 1896
BssT1I	CCWWGG	3 cut(s)	112, 832, 1722
Bst2UI	CCWGG	5 cut(s)	643, 947, 1043, 1067, 1580
Bst4CI	ACNGT	5 cut(s)	245, 613, 892, 1960, 2063
Bst6I	CTCTTC	6 cut(s)	161, 563, 818, 820, 1227, 1254
BstACI	GRCGYC	3 cut(s)	398, 885, 1896
BstAFI	CTTAAG	1 cut(s)	2306
BstBI	TTCGAA	1 cut(s)	1590
BstC8I	GCNNGC	2 cut(s)	85, 2056
BstDEI	CTNAG	2 cut(s)	699, 2238
BstDSI	CCRYGG	4 cut(s)	636, 1722, 1800, 2133
BstF5I	GGATG	6 cut(s)	669, 705, 1038, 1127, 1575, 2265
BstFNI	CGCG	3 cut(s)	268, 1385, 1392
BstHHI	GCGC	3 cut(s)	1298, 1387, 1392
BstKTI	GATC	6 cut(s)	469, 507, 622, 648, 807, 1621
BstMAI	GTCTC	9 cut(s)	328, 694, 822, 963, 1248, 1448, 1474, 1510, 2347
BstMBI	GATC	6 cut(s)	466, 504, 619, 645, 804, 1618
BstMCI	CGRYCG	2 cut(s)	152, 1137
BstNI	CCWGG	5 cut(s)	643, 947, 1043, 1067, 1580
BstPAI	GACNNNNGTC	2 cut(s)	834, 1977
BstSFI	CTRYAG	2 cut(s)	845, 1877
BstSLI	GKGCMC	1 cut(s)	1611
BstUI	CGCG	3 cut(s)	268, 1385, 1392
BstV2I	GAAGAC	4 cut(s)	894, 1513, 1605, 2298
BstX2I	RGATCY	1 cut(s)	1618
BstXI	CCANNNNNNTGG	1 cut(s)	2198
BstYI	RGATCY	1 cut(s)	1618
BstZI	CGGCCG	1 cut(s)	1134
Bsu15I	ATCGAT	1 cut(s)	465
BsuTUI	ATCGAT	1 cut(s)	465
BtgI	CCRYGG	4 cut(s)	636, 1722, 1800, 2133
BtrI	CACGTC	1 cut(s)	2086
BtsCI	GGATG	6 cut(s)	669, 705, 1038, 1127, 1575, 2265
BtsI	GCAGTG	2 cut(s)	85, 1158
BtsIMutI	CAGTG	4 cut(s)	85, 888, 1158, 1870
BveI	ACCTGC	1 cut(s)	1281
Cac8I	GCNNGC	2 cut(s)	85, 2056
CaiI	CAGNNNCTG	1 cut(s)	1440
CciI	TCATGA	1 cut(s)	393
CfoI	GCGC	3 cut(s)	1298, 1387, 1392
Cfr10I	RCCGGY	4 cut(s)	1706, 1833, 1901, 1985
Cfr13I	GGNCC	6 cut(s)	458, 836, 1677, 1685, 1825, 2141
Cfr9I	CCCGGG	1 cut(s)	839
ClaI	ATCGAT	1 cut(s)	465
CseI	GACGC	2 cut(s)	1736, 1919
Csp6I	GTAC	4 cut(s)	359, 766, 1211, 2278
CspAI	ACCGGT	1 cut(s)	1706
CviAII	CATG	5 cut(s)	305, 394, 935, 1417, 1723
CviQI	GTAC	4 cut(s)	359, 766, 1211, 2278
DdeI	CTNAG	2 cut(s)	699, 2238
DpnI	GATC	6 cut(s)	468, 506, 621, 647, 806, 1620
DpnII	GATC	6 cut(s)	466, 504, 619, 645, 804, 1618
DraIII	CACNNNGTG	2 cut(s)	937, 2089
EaeI	YGGCCR	3 cut(s)	1134, 1563, 1646
EagI	CGGCCG	1 cut(s)	1134
Eam1104I	CTCTTC	6 cut(s)	161, 563, 818, 820, 1227, 1254
EarI	CTCTTC	6 cut(s)	161, 563, 818, 820, 1227, 1254
EciI	GGCGGA	4 cut(s)	622, 1462, 1688, 1820
Ecl136II	GAGCTC	1 cut(s)	1360
EclXI	CGGCCG	1 cut(s)	1134
Eco130I	CCWWGG	3 cut(s)	112, 832, 1722
Eco147I	AGGCCT	1 cut(s)	1638
Eco24I	GRGCYC	2 cut(s)	552, 1362
Eco31I	GGTCTC	4 cut(s)	328, 822, 1474, 2347
Eco47I	GGWCC	3 cut(s)	458, 836, 1825
Eco52I	CGGCCG	1 cut(s)	1134
Eco53kI	GAGCTC	1 cut(s)	1360
Eco88I	CYCGRG	3 cut(s)	761, 839, 1346
EcoICRI	GAGCTC	1 cut(s)	1360
EcoO109I	RGGNCCY	2 cut(s)	458, 836
EcoRII	CCWGG	5 cut(s)	641, 945, 1041, 1065, 1578
EcoT14I	CCWWGG	3 cut(s)	112, 832, 1722
EcoT38I	GRGCYC	2 cut(s)	552, 1362
ErhI	CCWWGG	3 cut(s)	112, 832, 1722
Esp3I	CGTCTC	3 cut(s)	694, 1248, 1510
FaeI	CATG	5 cut(s)	308, 397, 938, 1420, 1726
FaqI	GGGAC	4 cut(s)	822, 1186, 1278, 2314
FatI	CATG	5 cut(s)	304, 393, 934, 1416, 1722
FauI	CCCGC	3 cut(s)	535, 804, 2215
FblI	GTMKAC	1 cut(s)	1145
FokI	GGATG	6 cut(s)	656, 692, 1025, 1114, 1562, 2272
FriOI	GRGCYC	2 cut(s)	552, 1362
FspBI	CTAG	8 cut(s)	594, 1094, 1430, 1712, 1733, 1775, 1997, 2129
GlaI	GCGC	3 cut(s)	1297, 1386, 1391
GsaI	CCCAGC	4 cut(s)	23, 457, 915, 1193
GsuI	CTGGAG	1 cut(s)	2197
HgaI	GACGC	2 cut(s)	1736, 1919
HhaI	GCGC	3 cut(s)	1298, 1387, 1392
Hin1I	GRCGYC	3 cut(s)	398, 885, 1896
Hin1II	CATG	5 cut(s)	308, 397, 938, 1420, 1726
Hin6I	GCGC	3 cut(s)	1296, 1385, 1390
HinP1I	GCGC	3 cut(s)	1296, 1385, 1390
HindIII	AAGCTT	1 cut(s)	2309
Hpy166II	GTNNAC	4 cut(s)	1146, 1609, 1870, 2280
Hpy188III	TCNNGA	8 cut(s)	394, 402, 623, 709, 857, 1348, 1622, 1733
Hpy8I	GTNNAC	4 cut(s)	1146, 1609, 1870, 2280
Hpy99I	CGWCG	6 cut(s)	653, 1865, 1898, 1913, 2090, 2149
HpyAV	CCTTC	4 cut(s)	1522, 1804, 2277, 2396
HpyCH4III	ACNGT	5 cut(s)	245, 613, 892, 1960, 2063
HpyCH4IV	ACGT	7 cut(s)	398, 687, 714, 885, 1695, 1896, 2085
HpyF3I	CTNAG	2 cut(s)	699, 2238
HpySE526I	ACGT	7 cut(s)	398, 687, 714, 885, 1695, 1896, 2085
Hsp92I	GRCGYC	3 cut(s)	398, 885, 1896
Hsp92II	CATG	5 cut(s)	308, 397, 938, 1420, 1726
HspAI	GCGC	3 cut(s)	1296, 1385, 1390
Kzo9I	GATC	6 cut(s)	466, 504, 619, 645, 804, 1618
LweI	GCATC	2 cut(s)	663, 1227
MaeI	CTAG	8 cut(s)	594, 1094, 1430, 1712, 1733, 1775, 1997, 2129
MaeII	ACGT	7 cut(s)	398, 687, 714, 885, 1695, 1896, 2085
MaeIII	GTNAC	7 cut(s)	23, 886, 917, 1341, 1897, 1954, 1979
MalI	GATC	6 cut(s)	468, 506, 621, 647, 806, 1620
MbiI	CCGCTC	2 cut(s)	777, 1478
MboI	GATC	6 cut(s)	466, 504, 619, 645, 804, 1618
MflI	RGATCY	1 cut(s)	1618
MhlI	GDGCHC	3 cut(s)	552, 1362, 1611
MluCI	AATT	3 cut(s)	222, 250, 376
MlyI	GAGTC	7 cut(s)	580, 854, 1151, 1987, 2036, 2230, 2296
MmeI	TCCRAC	7 cut(s)	129, 351, 396, 608, 888, 1932, 2297
MroXI	GAANNNNTTC	1 cut(s)	175
MseI	TTAA	2 cut(s)	1754, 2307
MslI	CAYNNNNRTG	4 cut(s)	341, 392, 933, 2285
MspA1I	CMGCKG	3 cut(s)	45, 850, 915
MspCI	CTTAAG	1 cut(s)	2306
MteI	GCGCNGCGC	1 cut(s)	1388
Mva1269I	GAATGC	2 cut(s)	1586, 1882
MvaI	CCWGG	5 cut(s)	643, 947, 1043, 1067, 1580
MvnI	CGCG	3 cut(s)	268, 1385, 1392
NcoI	CCATGG	1 cut(s)	1722
NdeII	GATC	6 cut(s)	466, 504, 619, 645, 804, 1618
NlaIII	CATG	5 cut(s)	308, 397, 938, 1420, 1726
NlaIV	GGNNCC	8 cut(s)	459, 551, 838, 1378, 1717, 1827, 1906, 1944
NmeAIII	GCCGAG	2 cut(s)	1165, 2009
NmuCI	GTSAC	6 cut(s)	23, 886, 917, 1897, 1954, 1979
NspV	TTCGAA	1 cut(s)	1590
OliI	CACNNNNGTG	1 cut(s)	2285
PaeR7I	CTCGAG	2 cut(s)	761, 1346
PagI	TCATGA	1 cut(s)	393
PaqCI	CACCTGC	1 cut(s)	1281
PceI	AGGCCT	1 cut(s)	1638
PcsI	WCGNNNNNNNCGW	2 cut(s)	395, 1353
PctI	GAATGC	2 cut(s)	1586, 1882
PdmI	GAANNNNTTC	1 cut(s)	175
PfeI	GAWTC	5 cut(s)	490, 853, 1449, 1530, 2116
PflFI	GACNNNGTC	1 cut(s)	38
PflMI	CCANNNNNTGG	1 cut(s)	642
PfoI	TCCNGGA	1 cut(s)	1578
PinAI	ACCGGT	1 cut(s)	1706
PleI	GAGTC	7 cut(s)	580, 854, 1150, 1986, 2036, 2230, 2296
PpsI	GAGTC	7 cut(s)	580, 854, 1150, 1986, 2036, 2230, 2296
PpuMI	RGGWCCY	2 cut(s)	458, 836
PshAI	GACNNNNGTC	2 cut(s)	834, 1977
Psp124BI	GAGCTC	1 cut(s)	1362
Psp5II	RGGWCCY	2 cut(s)	458, 836
Psp6I	CCWGG	5 cut(s)	641, 945, 1041, 1065, 1578
PspFI	CCCAGC	4 cut(s)	19, 453, 911, 1189
PspGI	CCWGG	5 cut(s)	641, 945, 1041, 1065, 1578
PspN4I	GGNNCC	8 cut(s)	459, 551, 838, 1378, 1717, 1827, 1906, 1944
PspPI	GGNCC	6 cut(s)	458, 836, 1677, 1685, 1825, 2141
PspPPI	RGGWCCY	2 cut(s)	458, 836
PspXI	VCTCGAGB	1 cut(s)	761
PstI	CTGCAG	2 cut(s)	849, 1881
PstNI	CAGNNNCTG	1 cut(s)	1440
PsuI	RGATCY	1 cut(s)	1618
PsyI	GACNNNGTC	1 cut(s)	38
PvuII	CAGCTG	1 cut(s)	850
RsaI	GTAC	4 cut(s)	360, 767, 1212, 2279
RsaNI	GTAC	4 cut(s)	359, 766, 1211, 2278
RseI	CAYNNNNRTG	4 cut(s)	341, 392, 933, 2285
SacI	GAGCTC	1 cut(s)	1362
SaqAI	TTAA	2 cut(s)	1754, 2307
Sau3AI	GATC	6 cut(s)	466, 504, 619, 645, 804, 1618
Sau96I	GGNCC	6 cut(s)	458, 836, 1677, 1685, 1825, 2141
SchI	GAGTC	7 cut(s)	580, 854, 1151, 1987, 2036, 2230, 2296
SduI	GDGCHC	3 cut(s)	552, 1362, 1611
SfaNI	GCATC	2 cut(s)	663, 1227
SfcI	CTRYAG	2 cut(s)	845, 1877
SfiI	GGCCNNNNNGGCC	1 cut(s)	1684
Sfr274I	CTCGAG	2 cut(s)	761, 1346
SfuI	TTCGAA	1 cut(s)	1590
SinI	GGWCC	3 cut(s)	458, 836, 1825
SlaI	CTCGAG	2 cut(s)	761, 1346
SmaI	CCCGGG	1 cut(s)	841
SmiMI	CAYNNNNRTG	4 cut(s)	341, 392, 933, 2285
SmlI	CTYRAG	4 cut(s)	761, 1346, 1975, 2306
SmoI	CTYRAG	4 cut(s)	761, 1346, 1975, 2306
SpeI	ACTAGT	1 cut(s)	1429
Sse9I	AATT	3 cut(s)	222, 250, 376
SseBI	AGGCCT	1 cut(s)	1638
SspMI	CTAG	8 cut(s)	594, 1094, 1430, 1712, 1733, 1775, 1997, 2129
SstI	GAGCTC	1 cut(s)	1362
StuI	AGGCCT	1 cut(s)	1638
StyI	CCWWGG	3 cut(s)	112, 832, 1722
TaaI	ACNGT	5 cut(s)	245, 613, 892, 1960, 2063
TaiI	ACGT	7 cut(s)	401, 690, 717, 888, 1698, 1899, 2088
TaqII	GACCGA	1 cut(s)	138
TasI	AATT	3 cut(s)	222, 250, 376
TauI	GCSGC	8 cut(s)	48, 540, 793, 1139, 1243, 1400, 1478, 1690
TfiI	GAWTC	5 cut(s)	490, 853, 1449, 1530, 2116
Tru1I	TTAA	2 cut(s)	1754, 2307
Tru9I	TTAA	2 cut(s)	1754, 2307
TscAI	CASTG	4 cut(s)	85, 895, 1165, 1877
TseFI	GTSAC	6 cut(s)	23, 886, 917, 1897, 1954, 1979
Tsp45I	GTSAC	6 cut(s)	23, 886, 917, 1897, 1954, 1979
TspDTI	ATGAA	2 cut(s)	956, 1980
TspGWI	ACGGA	2 cut(s)	1542, 1773
TspMI	CCCGGG	1 cut(s)	839
TspRI	CASTG	4 cut(s)	85, 895, 1165, 1877
Tth111I	GACNNNGTC	1 cut(s)	38
Van91I	CCANNNNNTGG	1 cut(s)	642
Vha464I	CTTAAG	1 cut(s)	2306
VneI	GTGCAC	1 cut(s)	1607
VpaK11BI	GGWCC	3 cut(s)	458, 836, 1825
XbaI	TCTAGA	1 cut(s)	1732
XhoI	CTCGAG	2 cut(s)	761, 1346
XmaI	CCCGGG	1 cut(s)	839
XmiI	GTMKAC	1 cut(s)	1145
XmnI	GAANNNNTTC	1 cut(s)	175
XspI	CTAG	8 cut(s)	594, 1094, 1430, 1712, 1733, 1775, 1997, 2129
ZraI	GACGTC	3 cut(s)	399, 886, 1897

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.