Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012999.1

Orthogroup ID

OG0014426

Physical Location & Seq

Genomic Coordinates Forward (+)

8830 .. 11493

Gene Structure 2664 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012999.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

atggtgaggaagagaatggcttccgagattgaagtgcagcccaccaacaacaccaacccaatcagaattggcagcagcaacaataacggtgataattatatgagggtttcgcgtaatcggagcgttatgctaaatccaaacccgacccatgacaaagtgaatatggtctccaactactccaccactatgctcaatctaccagtaccatcatcgtccaacaatttgaccacgctcatgacgtcaggaggtggtggggttttatcaactgcttccgcttcttcttcccctccaagctggggtcctatcgatcccttgtcgctccatcacccgattcaccatacccagatcgcagcaaccactcctcctcccgccgtctgcggcttttcggggctccctctcttcccaccggaaagaacgtctcctccgactcatactagcaccacgctttctaccgttatggatcaagacagctccgccacggcctggatcgacggcatcataaaagacctcatccacagctccaccaacgtctccattcctcagctcatccagaacgtccgagagataatcttcccttgcaatcccaacctcgcttcgctgctcgagtaccgcctccgctccatatccgagccgcccccgcctccgatcccactcttcaacagaagaagagaccaaggtcccggcctgcagctgaatctcgactccaactcctccggcataaatgacgtcactgttttcccgtcttcaaccaccagcggtcactctggtcatcaccatgtgatgaaccaggagttgtttttgaactggggagacaccctgccccaacaacagcagcaacaacccaaccctacatcttcccctacttgtaacgaaagcaacatccaggttcaacaacaccacatttcccaggtggttcacccacagcaacaaacactagataagcagcagcagcaacaacaaaactctccatccccggccgccgagtctacgcaaaccaccactgcaccaccgccgccatctacaacagccccagccacgccgtccccggcggtactaatgcgagagaagaaagaagagatgcggcagcagaagcgagacgaagagggactgcacctgctcaccttactcctccaatgcgccgaagctgtgtccgcagataactttgaggaagcaaccaaaatgttactcgagatttccgagctctcaaccccgttcggcacctccgcgcagcgcgtggcggcctacttctccgaggccatgtcagccagactagtcagctcctgtctcggattctacgcctccctcccggtctccgccgcacccatcacccattcccagaagctcgtctccgccttccaagtcttcaacggaatcagcccgttcgtcaagttctcccacttcacggccaaccaagccatccaggaagcattcgaaagagaagaccgggtgcacatagtagatctcgacataatgcaaggcctacaatggccggggctgttccacattctcgcctcccggcccggtgggccgccctacgtccgcctcaccggtctaggaacctccatggacgctctagaagccaccggaaaacgcttaaccgacttcgccgacaagctagggcttccgttcgagttctttcccgtggcggagaaggtaggcagtttggaccctgaccggctcaacataagcaagagagaggccgtcgccgtccactggctgcagcattctctttacgacgtcaccggctccgacgctaacacgctctggcttttgcagagattggcaccaaaagtagtgacggtagtggagcaggacttgagtcacgccggttcatttctagggaggtttgtggaggccatacactactactcggccttgttcgactctttgagtgcaagctacggtgaagaaagcgaggagaggcacgtcgtggagcagcagctattgtcgagggagattcggaatgttctagccgtgggaggcccgtcgaggagtggagaagtgaagttccataactggagggagaagttccagcagagtgggttcagggggatttctttggcgggaaatgcagcgactcaggcaaccttgctgcttgggatgttcccttctgatgggtacacactggtggaagacaatgggactcttaagcttggttggaaagacctttgtttgctgactgcttcggcttggagaccaccttatcttgctactaccaaccccaaccttcactactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001708 GO:0003002 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008104 GO:0008150 GO:0008356 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009889 GO:0009956 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032507 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045165 GO:0045185 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051179 GO:0051235 GO:0051252 GO:0051301 GO:0051457 GO:0051641 GO:0051651 GO:0060255 GO:0065007 GO:0065008 GO:0070727 GO:0072595 GO:0080090 GO:0090610 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

745

Amino Acids

81.62

Weight (kDa)

6.0

Isoelectric Point (pI)

56.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54220
fragaria_vesca	FvH4_6g09040
malus_domestica	MD04G1181500.v1.1 MD12G1196300.v1.1
prunus_persica	Prupe.6G300900_v2.0.a1
pyrus_communis	pycom04g16040 pycom12g18250
rosa_chinensis	RchiOBHm_Chr3g0459291
rosa_laevigata	RLG00000025096
rosa_multiflora	Rmu_sc0012999.1_g000002
rosa_roxburghii	Rroxscaffold_6G00420330
rosa_rugosa	Rorug03G0035100
rosa_samantha	Rh3AG092900 Rh3BG096000 Rh3CG097000 Rh3DG096600
rosa_wichuraiana	Rw3G007990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1122
AatII	GACGTC	3 cut(s)	242, 729, 1740
Acc36I	ACCTGC	1 cut(s)	1122
AccB1I	GGYRCC	2 cut(s)	1217, 1783
AccB7I	CCANNNNNTGG	1 cut(s)	483
AccBSI	CCGCTC	1 cut(s)	618
AccI	GTMKAC	1 cut(s)	986
AccII	CGCG	3 cut(s)	112, 1226, 1233
AclWI	GGATC	4 cut(s)	302, 468, 494, 640
AcoI	YGGCCR	3 cut(s)	975, 1404, 1487
AcyI	GRCGYC	3 cut(s)	239, 726, 1737
AdeI	CACNNNGTG	2 cut(s)	778, 1930
AfaI	GTAC	4 cut(s)	204, 608, 1053, 2120
AfiI	CCNNNNNNNGG	5 cut(s)	296, 483, 1402, 1713, 2114
AflII	CTTAAG	1 cut(s)	2147
AgeI	ACCGGT	1 cut(s)	1547
AgsI	TTSAA	6 cut(s)	32, 658, 747, 802, 890, 1366
AhlI	ACTAGT	1 cut(s)	1270
AjiI	CACGTC	1 cut(s)	1927
AjnI	CCWGG	5 cut(s)	482, 786, 882, 906, 1419
AleI	CACNNNNGTG	1 cut(s)	2126
AloI	GAACNNNNNNTCC	2 cut(s)	406, 438
Alw21I	GWGCWC	2 cut(s)	1203, 1452
Alw44I	GTGCAC	1 cut(s)	1448
AlwI	GGATC	4 cut(s)	302, 468, 494, 640
AlwNI	CAGNNNCTG	1 cut(s)	1281
Ama87I	CYCGRG	2 cut(s)	602, 1187
ApaLI	GTGCAC	1 cut(s)	1448
AsiGI	ACCGGT	1 cut(s)	1547
Asp700I	GAANNNNTTC	1 cut(s)	19
AspLEI	GCGC	3 cut(s)	1139, 1228, 1233
AspS9I	GGNCC	6 cut(s)	299, 677, 1518, 1526, 1666, 1982
AsuC2I	CCSGG	8 cut(s)	681, 974, 1046, 1307, 1445, 1491, 1516, 1521
AsuII	TTCGAA	1 cut(s)	1431
AvaI	CYCGRG	2 cut(s)	602, 1187
AvaII	GGWCC	3 cut(s)	299, 677, 1666
BaeGI	GKGCMC	1 cut(s)	1452
BanI	GGYRCC	2 cut(s)	1217, 1783
BanII	GRGCYC	2 cut(s)	393, 1203
BbsI	GAAGAC	4 cut(s)	735, 1354, 1446, 2139
Bbv12I	GWGCWC	2 cut(s)	1203, 1452
BbvCI	CCTCAGC	1 cut(s)	540
BccI	CCATC	7 cut(s)	214, 330, 976, 1024, 1331, 1424, 2108
BceAI	ACGGC	8 cut(s)	356, 495, 508, 1024, 1419, 1685, 1691, 1958
BciT130I	CCWGG	5 cut(s)	484, 788, 884, 908, 1421
BcnI	CCSGG	8 cut(s)	681, 974, 1046, 1307, 1445, 1491, 1516, 1521
BcuI	ACTAGT	1 cut(s)	1270
BfaI	CTAG	8 cut(s)	435, 935, 1271, 1553, 1574, 1616, 1838, 1970
BfmI	CTRYAG	2 cut(s)	686, 1718
BfrI	CTTAAG	1 cut(s)	2147
BfuAI	ACCTGC	1 cut(s)	1122
BglI	GCCNNNNNGGC	1 cut(s)	1525
BglII	AGATCT	1 cut(s)	1459
Bme18I	GGWCC	3 cut(s)	299, 677, 1666
BmeT110I	CYCGRG	2 cut(s)	602, 1187
BmgBI	CACGTC	1 cut(s)	1927
BmgT120I	GGNCC	6 cut(s)	299, 677, 1518, 1526, 1666, 1982
BmiI	GGNNCC	8 cut(s)	300, 392, 679, 1219, 1558, 1668, 1747, 1785
BmrI	ACTGGG	1 cut(s)	814
BmsI	GCATC	2 cut(s)	504, 1068
BmuI	ACTGGG	1 cut(s)	814
BoxI	GACNNNNGTC	2 cut(s)	675, 1818
BpiI	GAAGAC	4 cut(s)	735, 1354, 1446, 2139
BpmI	CTGGAG	1 cut(s)	2038
Bpu10I	CCTNAGC	1 cut(s)	540
Bpu14I	TTCGAA	1 cut(s)	1431
BpuEI	CTTGAG	1 cut(s)	1837
BpuMI	CCSGG	8 cut(s)	681, 974, 1046, 1307, 1445, 1491, 1516, 1521
Bsa29I	ATCGAT	1 cut(s)	306
BsaHI	GRCGYC	3 cut(s)	239, 726, 1737
BsaI	GGTCTC	4 cut(s)	172, 663, 1315, 2188
BsaWI	WCCGGW	3 cut(s)	406, 1547, 1583
BsaXI	ACNNNNNCTCC	8 cut(s)	346, 349, 376, 379, 406, 436, 692, 722
Bsc4I	CCNNNNNNNGG	5 cut(s)	296, 483, 1402, 1713, 2114
Bse118I	RCCGGY	4 cut(s)	1547, 1674, 1742, 1826
Bse1I	ACTGG	5 cut(s)	200, 809, 1718, 2021, 2130
BseBI	CCWGG	5 cut(s)	484, 788, 884, 908, 1421
BseCI	ATCGAT	1 cut(s)	306
BseGI	GGATG	6 cut(s)	510, 546, 879, 968, 1416, 2106
BseLI	CCNNNNNNNGG	5 cut(s)	296, 483, 1402, 1713, 2114
BseMII	CTCAG	2 cut(s)	554, 2093
BseNI	ACTGG	5 cut(s)	200, 809, 1718, 2021, 2130
BseRI	GAGGAG	7 cut(s)	351, 354, 411, 700, 1118, 1931, 2005
BseSI	GKGCMC	1 cut(s)	1452
BseX3I	CGGCCG	1 cut(s)	975
BseYI	CCCAGC	2 cut(s)	294, 1030
BsgI	GTGCAG	3 cut(s)	56, 987, 1094
Bsh1236I	CGCG	3 cut(s)	112, 1226, 1233
Bsh1285I	CGRYCG	1 cut(s)	978
BshNI	GGYRCC	2 cut(s)	1217, 1783
BshTI	ACCGGT	1 cut(s)	1547
BshVI	ATCGAT	1 cut(s)	306
BsiEI	CGRYCG	1 cut(s)	978
BsiHKAI	GWGCWC	2 cut(s)	1203, 1452
BsiHKCI	CYCGRG	2 cut(s)	602, 1187
BslFI	GGGAC	4 cut(s)	663, 1027, 1119, 2155
BslI	CCNNNNNNNGG	5 cut(s)	296, 483, 1402, 1713, 2114
BsmBI	CGTCTC	4 cut(s)	423, 535, 1089, 1351
BsmFI	GGGAC	4 cut(s)	663, 1027, 1119, 2155
BsmI	GAATGC	2 cut(s)	1427, 1723
Bso31I	GGTCTC	4 cut(s)	172, 663, 1315, 2188
BsoBI	CYCGRG	2 cut(s)	602, 1187
Bsp119I	TTCGAA	1 cut(s)	1431
Bsp1286I	GDGCHC	3 cut(s)	393, 1203, 1452
Bsp143I	GATC	6 cut(s)	307, 345, 460, 486, 645, 1459
Bsp19I	CCATGG	1 cut(s)	1563
BspCNI	CTCAG	2 cut(s)	553, 2092
BspDI	ATCGAT	1 cut(s)	306
BspFNI	CGCG	3 cut(s)	112, 1226, 1233
BspHI	TCATGA	1 cut(s)	234
BspLI	GGNNCC	8 cut(s)	300, 392, 679, 1219, 1558, 1668, 1747, 1785
BspMAI	CTGCAG	2 cut(s)	690, 1722
BspMI	ACCTGC	1 cut(s)	1122
BspPI	GGATC	4 cut(s)	302, 468, 494, 640
BspT104I	TTCGAA	1 cut(s)	1431
BspT107I	GGYRCC	2 cut(s)	1217, 1783
BspTI	CTTAAG	1 cut(s)	2147
BspTNI	GGTCTC	4 cut(s)	172, 663, 1315, 2188
BsrBI	CCGCTC	1 cut(s)	618
BsrFI	RCCGGY	4 cut(s)	1547, 1674, 1742, 1826
BsrI	ACTGG	5 cut(s)	200, 809, 1718, 2021, 2130
BssAI	RCCGGY	4 cut(s)	1547, 1674, 1742, 1826
BssMI	GATC	6 cut(s)	307, 345, 460, 486, 645, 1459
BssNI	GRCGYC	3 cut(s)	239, 726, 1737
BssT1I	CCWWGG	2 cut(s)	673, 1563
Bst2UI	CCWGG	5 cut(s)	484, 788, 884, 908, 1421
Bst4CI	ACNGT	5 cut(s)	89, 454, 733, 1801, 1904
Bst6I	CTCTTC	6 cut(s)	5, 404, 659, 661, 1068, 1095
BstACI	GRCGYC	3 cut(s)	239, 726, 1737
BstAFI	CTTAAG	1 cut(s)	2147
BstBI	TTCGAA	1 cut(s)	1431
BstC8I	GCNNGC	2 cut(s)	686, 1897
BstDEI	CTNAG	2 cut(s)	540, 2079
BstDSI	CCRYGG	4 cut(s)	477, 1563, 1641, 1974
BstF5I	GGATG	6 cut(s)	510, 546, 879, 968, 1416, 2106
BstFNI	CGCG	3 cut(s)	112, 1226, 1233
BstHHI	GCGC	3 cut(s)	1139, 1228, 1233
BstKTI	GATC	6 cut(s)	310, 348, 463, 489, 648, 1462
BstMBI	GATC	6 cut(s)	307, 345, 460, 486, 645, 1459
BstMCI	CGRYCG	1 cut(s)	978
BstNI	CCWGG	5 cut(s)	484, 788, 884, 908, 1421
BstPAI	GACNNNNGTC	2 cut(s)	675, 1818
BstSFI	CTRYAG	2 cut(s)	686, 1718
BstSLI	GKGCMC	1 cut(s)	1452
BstUI	CGCG	3 cut(s)	112, 1226, 1233
BstV2I	GAAGAC	4 cut(s)	735, 1354, 1446, 2139
BstX2I	RGATCY	1 cut(s)	1459
BstXI	CCANNNNNNTGG	1 cut(s)	2039
BstYI	RGATCY	1 cut(s)	1459
BstZI	CGGCCG	1 cut(s)	975
Bsu15I	ATCGAT	1 cut(s)	306
BsuTUI	ATCGAT	1 cut(s)	306
BtgI	CCRYGG	4 cut(s)	477, 1563, 1641, 1974
BtrI	CACGTC	1 cut(s)	1927
BtsCI	GGATG	6 cut(s)	510, 546, 879, 968, 1416, 2106
BtsI	GCAGTG	1 cut(s)	999
BtsIMutI	CAGTG	4 cut(s)	729, 999, 1711, 2123
BveI	ACCTGC	1 cut(s)	1122
Cac8I	GCNNGC	2 cut(s)	686, 1897
CaiI	CAGNNNCTG	1 cut(s)	1281
CciI	TCATGA	1 cut(s)	234
CfoI	GCGC	3 cut(s)	1139, 1228, 1233
Cfr10I	RCCGGY	4 cut(s)	1547, 1674, 1742, 1826
Cfr13I	GGNCC	6 cut(s)	299, 677, 1518, 1526, 1666, 1982
ClaI	ATCGAT	1 cut(s)	306
CseI	GACGC	2 cut(s)	1577, 1760
Csp6I	GTAC	4 cut(s)	203, 607, 1052, 2119
CspAI	ACCGGT	1 cut(s)	1547
CviAII	CATG	5 cut(s)	149, 235, 776, 1258, 1564
CviQI	GTAC	4 cut(s)	203, 607, 1052, 2119
DdeI	CTNAG	2 cut(s)	540, 2079
DpnI	GATC	6 cut(s)	309, 347, 462, 488, 647, 1461
DpnII	GATC	6 cut(s)	307, 345, 460, 486, 645, 1459
DraIII	CACNNNGTG	2 cut(s)	778, 1930
EaeI	YGGCCR	3 cut(s)	975, 1404, 1487
EagI	CGGCCG	1 cut(s)	975
Eam1104I	CTCTTC	6 cut(s)	5, 404, 659, 661, 1068, 1095
EarI	CTCTTC	6 cut(s)	5, 404, 659, 661, 1068, 1095
EciI	GGCGGA	5 cut(s)	463, 1303, 1339, 1529, 1661
Ecl136II	GAGCTC	1 cut(s)	1201
EclXI	CGGCCG	1 cut(s)	975
Eco130I	CCWWGG	2 cut(s)	673, 1563
Eco147I	AGGCCT	1 cut(s)	1479
Eco24I	GRGCYC	2 cut(s)	393, 1203
Eco31I	GGTCTC	4 cut(s)	172, 663, 1315, 2188
Eco47I	GGWCC	3 cut(s)	299, 677, 1666
Eco52I	CGGCCG	1 cut(s)	975
Eco53kI	GAGCTC	1 cut(s)	1201
Eco88I	CYCGRG	2 cut(s)	602, 1187
EcoICRI	GAGCTC	1 cut(s)	1201
EcoO109I	RGGNCCY	2 cut(s)	299, 677
EcoRII	CCWGG	5 cut(s)	482, 786, 882, 906, 1419
EcoT14I	CCWWGG	2 cut(s)	673, 1563
EcoT38I	GRGCYC	2 cut(s)	393, 1203
ErhI	CCWWGG	2 cut(s)	673, 1563
Esp3I	CGTCTC	4 cut(s)	423, 535, 1089, 1351
FaeI	CATG	5 cut(s)	152, 238, 779, 1261, 1567
FaqI	GGGAC	4 cut(s)	663, 1027, 1119, 2155
FatI	CATG	5 cut(s)	148, 234, 775, 1257, 1563
FauI	CCCGC	3 cut(s)	376, 645, 2056
FblI	GTMKAC	1 cut(s)	986
FokI	GGATG	6 cut(s)	497, 533, 866, 955, 1403, 2113
FriOI	GRGCYC	2 cut(s)	393, 1203
FspBI	CTAG	8 cut(s)	435, 935, 1271, 1553, 1574, 1616, 1838, 1970
GlaI	GCGC	3 cut(s)	1138, 1227, 1232
GsaI	CCCAGC	2 cut(s)	298, 1034
GsuI	CTGGAG	1 cut(s)	2038
HgaI	GACGC	2 cut(s)	1577, 1760
HhaI	GCGC	3 cut(s)	1139, 1228, 1233
Hin1I	GRCGYC	3 cut(s)	239, 726, 1737
Hin1II	CATG	5 cut(s)	152, 238, 779, 1261, 1567
Hin6I	GCGC	3 cut(s)	1137, 1226, 1231
HinP1I	GCGC	3 cut(s)	1137, 1226, 1231
HindIII	AAGCTT	1 cut(s)	2150
Hpy166II	GTNNAC	5 cut(s)	916, 987, 1450, 1711, 2121
Hpy188III	TCNNGA	8 cut(s)	235, 243, 464, 550, 698, 1189, 1463, 1574
Hpy8I	GTNNAC	5 cut(s)	916, 987, 1450, 1711, 2121
Hpy99I	CGWCG	6 cut(s)	494, 1706, 1739, 1754, 1931, 1990
HpyAV	CCTTC	4 cut(s)	1363, 1645, 2118, 2237
HpyCH4III	ACNGT	5 cut(s)	89, 454, 733, 1801, 1904
HpyCH4IV	ACGT	8 cut(s)	239, 416, 528, 555, 726, 1536, 1737, 1926
HpyF3I	CTNAG	2 cut(s)	540, 2079
HpySE526I	ACGT	8 cut(s)	239, 416, 528, 555, 726, 1536, 1737, 1926
Hsp92I	GRCGYC	3 cut(s)	239, 726, 1737
Hsp92II	CATG	5 cut(s)	152, 238, 779, 1261, 1567
HspAI	GCGC	3 cut(s)	1137, 1226, 1231
Kzo9I	GATC	6 cut(s)	307, 345, 460, 486, 645, 1459
LweI	GCATC	2 cut(s)	504, 1068
MaeI	CTAG	8 cut(s)	435, 935, 1271, 1553, 1574, 1616, 1838, 1970
MaeII	ACGT	8 cut(s)	239, 416, 528, 555, 726, 1536, 1737, 1926
MaeIII	GTNAC	7 cut(s)	727, 758, 866, 1182, 1738, 1795, 1820
MalI	GATC	6 cut(s)	309, 347, 462, 488, 647, 1461
MbiI	CCGCTC	1 cut(s)	618
MboI	GATC	6 cut(s)	307, 345, 460, 486, 645, 1459
MflI	RGATCY	1 cut(s)	1459
MhlI	GDGCHC	3 cut(s)	393, 1203, 1452
MluCI	AATT	3 cut(s)	66, 94, 220
MlyI	GAGTC	7 cut(s)	421, 695, 992, 1828, 1877, 2071, 2137
MmeI	TCCRAC	6 cut(s)	195, 240, 449, 729, 1773, 2138
MroXI	GAANNNNTTC	1 cut(s)	19
MseI	TTAA	2 cut(s)	1595, 2148
MslI	CAYNNNNRTG	4 cut(s)	185, 233, 774, 2126
MspA1I	CMGCKG	2 cut(s)	691, 756
MspCI	CTTAAG	1 cut(s)	2147
MteI	GCGCNGCGC	1 cut(s)	1229
Mva1269I	GAATGC	2 cut(s)	1427, 1723
MvaI	CCWGG	5 cut(s)	484, 788, 884, 908, 1421
MvnI	CGCG	3 cut(s)	112, 1226, 1233
NciI	CCSGG	8 cut(s)	681, 974, 1046, 1307, 1445, 1491, 1516, 1521
NcoI	CCATGG	1 cut(s)	1563
NdeII	GATC	6 cut(s)	307, 345, 460, 486, 645, 1459
NlaIII	CATG	5 cut(s)	152, 238, 779, 1261, 1567
NlaIV	GGNNCC	8 cut(s)	300, 392, 679, 1219, 1558, 1668, 1747, 1785
NmeAIII	GCCGAG	2 cut(s)	1006, 1850
NmuCI	GTSAC	5 cut(s)	727, 758, 1738, 1795, 1820
NspV	TTCGAA	1 cut(s)	1431
OliI	CACNNNNGTG	1 cut(s)	2126
PaeR7I	CTCGAG	2 cut(s)	602, 1187
PagI	TCATGA	1 cut(s)	234
PaqCI	CACCTGC	1 cut(s)	1122
PceI	AGGCCT	1 cut(s)	1479
PcsI	WCGNNNNNNNCGW	3 cut(s)	236, 422, 1194
PctI	GAATGC	2 cut(s)	1427, 1723
PdmI	GAANNNNTTC	1 cut(s)	19
PfeI	GAWTC	5 cut(s)	331, 694, 1290, 1371, 1957
PflMI	CCANNNNNTGG	1 cut(s)	483
PfoI	TCCNGGA	1 cut(s)	1419
PinAI	ACCGGT	1 cut(s)	1547
PleI	GAGTC	7 cut(s)	421, 695, 991, 1827, 1877, 2071, 2137
PpsI	GAGTC	7 cut(s)	421, 695, 991, 1827, 1877, 2071, 2137
PpuMI	RGGWCCY	2 cut(s)	299, 677
PshAI	GACNNNNGTC	2 cut(s)	675, 1818
Psp124BI	GAGCTC	1 cut(s)	1203
Psp5II	RGGWCCY	2 cut(s)	299, 677
Psp6I	CCWGG	5 cut(s)	482, 786, 882, 906, 1419
PspFI	CCCAGC	2 cut(s)	294, 1030
PspGI	CCWGG	5 cut(s)	482, 786, 882, 906, 1419
PspN4I	GGNNCC	8 cut(s)	300, 392, 679, 1219, 1558, 1668, 1747, 1785
PspPI	GGNCC	6 cut(s)	299, 677, 1518, 1526, 1666, 1982
PspPPI	RGGWCCY	2 cut(s)	299, 677
PspXI	VCTCGAGB	1 cut(s)	602
PstI	CTGCAG	2 cut(s)	690, 1722
PstNI	CAGNNNCTG	1 cut(s)	1281
PsuI	RGATCY	1 cut(s)	1459
PvuII	CAGCTG	1 cut(s)	691
RsaI	GTAC	4 cut(s)	204, 608, 1053, 2120
RsaNI	GTAC	4 cut(s)	203, 607, 1052, 2119
RseI	CAYNNNNRTG	4 cut(s)	185, 233, 774, 2126
SacI	GAGCTC	1 cut(s)	1203
SaqAI	TTAA	2 cut(s)	1595, 2148
Sau3AI	GATC	6 cut(s)	307, 345, 460, 486, 645, 1459
Sau96I	GGNCC	6 cut(s)	299, 677, 1518, 1526, 1666, 1982
SchI	GAGTC	7 cut(s)	421, 695, 992, 1828, 1877, 2071, 2137
SduI	GDGCHC	3 cut(s)	393, 1203, 1452
SfaNI	GCATC	2 cut(s)	504, 1068
SfcI	CTRYAG	2 cut(s)	686, 1718
SfiI	GGCCNNNNNGGCC	1 cut(s)	1525
Sfr274I	CTCGAG	2 cut(s)	602, 1187
SfuI	TTCGAA	1 cut(s)	1431
SinI	GGWCC	3 cut(s)	299, 677, 1666
SlaI	CTCGAG	2 cut(s)	602, 1187
SmiMI	CAYNNNNRTG	4 cut(s)	185, 233, 774, 2126
SmlI	CTYRAG	4 cut(s)	602, 1187, 1816, 2147
SmoI	CTYRAG	4 cut(s)	602, 1187, 1816, 2147
SpeI	ACTAGT	1 cut(s)	1270
Sse9I	AATT	3 cut(s)	66, 94, 220
SseBI	AGGCCT	1 cut(s)	1479
SspMI	CTAG	8 cut(s)	435, 935, 1271, 1553, 1574, 1616, 1838, 1970
SstI	GAGCTC	1 cut(s)	1203
StuI	AGGCCT	1 cut(s)	1479
StyI	CCWWGG	2 cut(s)	673, 1563
TaaI	ACNGT	5 cut(s)	89, 454, 733, 1801, 1904
TaiI	ACGT	8 cut(s)	242, 419, 531, 558, 729, 1539, 1740, 1929
TasI	AATT	3 cut(s)	66, 94, 220
TauI	GCSGC	8 cut(s)	381, 634, 980, 1015, 1084, 1241, 1319, 1531
TfiI	GAWTC	5 cut(s)	331, 694, 1290, 1371, 1957
Tru1I	TTAA	2 cut(s)	1595, 2148
Tru9I	TTAA	2 cut(s)	1595, 2148
TscAI	CASTG	4 cut(s)	736, 1006, 1718, 2130
TseFI	GTSAC	5 cut(s)	727, 758, 1738, 1795, 1820
Tsp45I	GTSAC	5 cut(s)	727, 758, 1738, 1795, 1820
TspDTI	ATGAA	2 cut(s)	797, 1821
TspGWI	ACGGA	2 cut(s)	1383, 1614
TspRI	CASTG	4 cut(s)	736, 1006, 1718, 2130
Van91I	CCANNNNNTGG	1 cut(s)	483
Vha464I	CTTAAG	1 cut(s)	2147
VneI	GTGCAC	1 cut(s)	1448
VpaK11BI	GGWCC	3 cut(s)	299, 677, 1666
XbaI	TCTAGA	1 cut(s)	1573
XhoI	CTCGAG	2 cut(s)	602, 1187
XmiI	GTMKAC	1 cut(s)	986
XmnI	GAANNNNTTC	1 cut(s)	19
XspI	CTAG	8 cut(s)	435, 935, 1271, 1553, 1574, 1616, 1838, 1970
ZraI	GACGTC	3 cut(s)	240, 727, 1738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.