Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0014426

Physical Location & Seq

Genomic Coordinates Reverse (-)

7741942 .. 7745595

Gene Structure 3654 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ42588

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGGCTGCTTGTGCTTTGCTGGGTGACAATGGCGACCTTGTCAGCGGCAATGGAAGCAATAACAACAACAACAACAACAACAACAGCCCATTGAACTCCAACAGCCAAGGCAGCAGCGTGGTCGAGCAGCAGAACCCGGTTCGGTCGAAAATGGTGAGGAAGAGAATGGCTTCCGAGATTGAAGTGCAGCCCACCAACAACACCAACCCAATCAGAATTGGCAGCAGCAACAATAACGGTGATAATTATATGAGGGTTTCGCGTAATCGGAGCGTTATGCTAAATCCAAACCCGACCCATGACAAAGTGAATATGGTCTCCAACTACTCCACCACTATGCTCAATCTACCAGTACCATCATCGTCCAACAATTTGACCACGCTCATGACGTCAGGAGGTGGTGGGGTTTTATCAACTGCTTCCGCTTCTTCTTCCCCTCCAAGCTGGGGTCCTATCGATCCCTTGTCGCTCCATCACCCGATTCACCATACCCAGATCGCCGCGACCACTCCTCCTCCCGCCGTCTGCGGCTTTTCGGGGCTCCCTCTCTTCCCACCGGAAAGAACGTCTCCTCCCAATCATACTAGTACCACGCTTTCTACCGTTATGGATCAAGACAGCTCCGCCACGGCCTGGATCGACGGCATCATAAAAGACCTCATCCACAGCTCCACCAACGTCTCCATTCCTCAGCTCATCCAGAACGTCCGAGAGATAATCTTCCCTTGCAATCCCAACCTCGCTTCGCTGCTCGAGTACCGCCTCCGCTCCATATCCGAGCCGCCCCCGCCTCCGATCCCACTCTTCAACAGAAGAAGAGACCAAGGTCCCGGGCTGCAGCTGAATCTCGACTCCAACTCCTCCGGCATAAATGACGTCACTGTTTTCCCGTCTTCAACCACCAGCGGTCACCATGTGATGAACCAGGAGTTGTTTTTGAACTGGGGAGACACCCTATCCCAACAACAGCAGCAACAACCCAACCCTACATCTTCCCCTACTTGTAACGAAAGCAACATCCAGGTTCAACAACACCACATTTCCCAGGTGGTTCACCCACAGCAACAAACACTAGATAAGCAGCAGCAGCAACAACAAAACTCTCCATCCCCGGCCGCCGAGTCTACGCAAACCACCACTGCACCAGCACCGCCATCTACAACAGCCCCAGCCACGCCGTCCCCGGCGGTACTAATGCGAGAGAAGAAAGAAGAGATGCGGCAGCAGAAGCGAGACGAAGAGGGACTGCACCTGCTCACCTTACTCCTCCAATGCGCCGAAGCTGTGTCCGCAGATAACTTTGAGGAAGCAACCAAAATGTTACTCGAGATTTCCGAGCTCTCAACCCCGTTCGGCACCTCCGCGCAGCGCGTGGCGGCCTACTTCTCCGAGGCCATGTCAGCCAGACTAGTCAGCTCCTGTCTCGGATTCTACGCCTCCCTCCCGGTCTCCGCCGCTCCCATCACCCATTCCCAGAAGCTCGTCTCCGCCTTCCAAGTCTTCAACGGAATCAGCCCGTTCGTCAAGTTCTCCCACTTCACGGCCAACCAAGCCATCCAGGAAGCATTCGAAAGAGAAGACCGGGTGCACATAGTAGATCTCGACATAATGCAAGGCCTACAATGGCCGGGGCTGTTCCACATTCTCGCCTCCCGGCCCGGTGGGCCGCCCTACGTCCGCCTCACCGGTCTAGGAACCTCCATGGACGCTCTAGAAGCCACCGGAAAACGCTTAACCGACTTCGCCGACAAGCTAGGGCTTCCGTTCGAGTTCTTTCCCGTGGCGGAGAAGGTAGGCAGTTTGGACCCTGACCGGCTCAACATAAGCAAGAGAGAGGCCGTCGCCGTCCACTGGCTGCAGCATTCTCTTTACGACGTCACCGGCTCCGACGCCAACACGCTCTGGCTTTTGCAGAGATTGGCACCGAAAGTAGTGACGGTAGTGGAGCAGGACTTGAGTCACGCCGGTTCATTTCTAGGGAGGTTTGTGGAGGCCATACACTACTACTCGGCCTTGTTCGACTCTTTGAGTGCAAGCTACGGTGAAGAAAGCGAGGAGAGGCACGTCGTGGAGCAGCAGCTATTGTCGAGGGAGATTCGGAATGTTCTAGCCGTGGGAGGCCCGTCGAGGAGTGGAGAAGTGAAGTTCCATAACTGGAGGGAGAAGTTCCAGCAGAGTGGGTTCAGGGGGATTTCTTTGGCGGGAAATGCAGCGACTCAGGCAACCTTGCTGCTTGGGATGTTCCCTTCTGATGGGTACACACTGGTGGAAGACAATGGGACTCTTAAGCTTGGTTGGAAAGACCTTTGTTTGCTGACTGCTTCGGCTTGGAGACCACCTTATCTTGCTACTACCAACCCCAACCTTCACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001708 GO:0003002 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008104 GO:0008150 GO:0008356 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009889 GO:0009956 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032507 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045165 GO:0045185 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051179 GO:0051235 GO:0051252 GO:0051301 GO:0051457 GO:0051641 GO:0051651 GO:0060255 GO:0065007 GO:0065008 GO:0070727 GO:0072595 GO:0080090 GO:0090610 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

791

Amino Acids

86.28

Weight (kDa)

5.89

Isoelectric Point (pI)

56.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	419 - 778	2.2e-130	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54220
fragaria_vesca	FvH4_6g09040
malus_domestica	MD04G1181500.v1.1 MD12G1196300.v1.1
prunus_persica	Prupe.6G300900_v2.0.a1
pyrus_communis	pycom04g16040 pycom12g18250
rosa_chinensis	RchiOBHm_Chr3g0459291
rosa_laevigata	RLG00000025096
rosa_multiflora	Rmu_sc0012999.1_g000002
rosa_roxburghii	Rroxscaffold_6G00420330
rosa_rugosa	Rorug03G0035100
rosa_samantha	Rh3AG092900 Rh3BG096000 Rh3CG097000 Rh3DG096600
rosa_wichuraiana	Rw3G007990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1260
AatII	GACGTC	3 cut(s)	392, 879, 1878
Acc36I	ACCTGC	1 cut(s)	1260
AccB1I	GGYRCC	2 cut(s)	1355, 1921
AccB7I	CCANNNNNTGG	1 cut(s)	633
AccBSI	CCGCTC	2 cut(s)	768, 1457
AccI	GTMKAC	1 cut(s)	1124
AccII	CGCG	4 cut(s)	262, 503, 1364, 1371
AclWI	GGATC	4 cut(s)	452, 618, 644, 790
AcoI	YGGCCR	3 cut(s)	1113, 1542, 1625
AcyI	GRCGYC	4 cut(s)	389, 876, 1875, 1890
AdeI	CACNNNGTG	2 cut(s)	916, 2068
AfaI	GTAC	5 cut(s)	354, 589, 758, 1191, 2258
AfiI	CCNNNNNNNGG	5 cut(s)	446, 633, 1540, 1851, 2252
AflII	CTTAAG	1 cut(s)	2285
AgeI	ACCGGT	1 cut(s)	1685
AgsI	TTSAA	7 cut(s)	94, 182, 808, 897, 940, 1028, 1504
AhlI	ACTAGT	2 cut(s)	584, 1408
AjiI	CACGTC	1 cut(s)	2065
AjnI	CCWGG	5 cut(s)	632, 924, 1020, 1044, 1557
AleI	CACNNNNGTG	1 cut(s)	2264
AloI	GAACNNNNNNTCC	2 cut(s)	556, 588
Alw21I	GWGCWC	2 cut(s)	1341, 1590
Alw44I	GTGCAC	1 cut(s)	1586
AlwI	GGATC	4 cut(s)	452, 618, 644, 790
AlwNI	CAGNNNCTG	1 cut(s)	1419
Ama87I	CYCGRG	3 cut(s)	752, 830, 1325
ApaLI	GTGCAC	1 cut(s)	1586
AsiGI	ACCGGT	1 cut(s)	1685
Asp700I	GAANNNNTTC	1 cut(s)	169
AspLEI	GCGC	3 cut(s)	1277, 1366, 1371
AspS9I	GGNCC	6 cut(s)	449, 827, 1656, 1664, 1804, 2120
AsuII	TTCGAA	1 cut(s)	1569
AvaI	CYCGRG	3 cut(s)	752, 830, 1325
AvaII	GGWCC	3 cut(s)	449, 827, 1804
BaeGI	GKGCMC	1 cut(s)	1590
BanI	GGYRCC	2 cut(s)	1355, 1921
BanII	GRGCYC	2 cut(s)	543, 1341
BbsI	GAAGAC	4 cut(s)	885, 1492, 1584, 2277
Bbv12I	GWGCWC	2 cut(s)	1341, 1590
BbvCI	CCTCAGC	1 cut(s)	690
BccI	CCATC	7 cut(s)	364, 480, 1114, 1162, 1469, 1562, 2246
BceAI	ACGGC	8 cut(s)	506, 645, 658, 1162, 1557, 1823, 1829, 2096
BcgI	CGANNNNNNTGC	2 cut(s)	103, 137
BciT130I	CCWGG	5 cut(s)	634, 926, 1022, 1046, 1559
BcuI	ACTAGT	2 cut(s)	584, 1408
BfaI	CTAG	8 cut(s)	585, 1073, 1409, 1691, 1712, 1754, 1976, 2108
BfmI	CTRYAG	2 cut(s)	836, 1856
BfrI	CTTAAG	1 cut(s)	2285
BfuAI	ACCTGC	1 cut(s)	1260
BglI	GCCNNNNNGGC	1 cut(s)	1663
BglII	AGATCT	1 cut(s)	1597
Bme18I	GGWCC	3 cut(s)	449, 827, 1804
BmeT110I	CYCGRG	3 cut(s)	752, 830, 1325
BmgBI	CACGTC	1 cut(s)	2065
BmgT120I	GGNCC	6 cut(s)	449, 827, 1656, 1664, 1804, 2120
BmiI	GGNNCC	8 cut(s)	450, 542, 829, 1357, 1696, 1806, 1885, 1923
BmrI	ACTGGG	1 cut(s)	952
BmsI	GCATC	2 cut(s)	654, 1206
BmuI	ACTGGG	1 cut(s)	952
BoxI	GACNNNNGTC	2 cut(s)	825, 1956
BpiI	GAAGAC	4 cut(s)	885, 1492, 1584, 2277
BpmI	CTGGAG	1 cut(s)	2176
Bpu10I	CCTNAGC	1 cut(s)	690
Bpu14I	TTCGAA	1 cut(s)	1569
BpuEI	CTTGAG	1 cut(s)	1975
Bsa29I	ATCGAT	1 cut(s)	456
BsaHI	GRCGYC	4 cut(s)	389, 876, 1875, 1890
BsaI	GGTCTC	4 cut(s)	322, 813, 1453, 2326
BsaWI	WCCGGW	3 cut(s)	556, 1685, 1721
BsaXI	ACNNNNNCTCC	8 cut(s)	496, 499, 526, 529, 556, 586, 842, 872
Bsc4I	CCNNNNNNNGG	5 cut(s)	446, 633, 1540, 1851, 2252
Bse118I	RCCGGY	4 cut(s)	1685, 1812, 1880, 1964
Bse1I	ACTGG	5 cut(s)	350, 947, 1856, 2159, 2268
Bse3DI	GCAATG	1 cut(s)	55
BseBI	CCWGG	5 cut(s)	634, 926, 1022, 1046, 1559
BseCI	ATCGAT	1 cut(s)	456
BseGI	GGATG	6 cut(s)	660, 696, 1017, 1106, 1554, 2244
BseLI	CCNNNNNNNGG	5 cut(s)	446, 633, 1540, 1851, 2252
BseMI	GCAATG	1 cut(s)	55
BseMII	CTCAG	2 cut(s)	704, 2231
BseNI	ACTGG	5 cut(s)	350, 947, 1856, 2159, 2268
BseRI	GAGGAG	7 cut(s)	501, 504, 561, 850, 1256, 2069, 2143
BseSI	GKGCMC	1 cut(s)	1590
BseX3I	CGGCCG	1 cut(s)	1113
BseYI	CCCAGC	3 cut(s)	19, 444, 1168
BsgI	GTGCAG	3 cut(s)	206, 1125, 1232
Bsh1236I	CGCG	4 cut(s)	262, 503, 1364, 1371
Bsh1285I	CGRYCG	2 cut(s)	146, 1116
BshNI	GGYRCC	2 cut(s)	1355, 1921
BshTI	ACCGGT	1 cut(s)	1685
BshVI	ATCGAT	1 cut(s)	456
BsiEI	CGRYCG	2 cut(s)	146, 1116
BsiHKAI	GWGCWC	2 cut(s)	1341, 1590
BsiHKCI	CYCGRG	3 cut(s)	752, 830, 1325
BslFI	GGGAC	4 cut(s)	813, 1165, 1257, 2293
BslI	CCNNNNNNNGG	5 cut(s)	446, 633, 1540, 1851, 2252
BsmBI	CGTCTC	4 cut(s)	573, 685, 1227, 1489
BsmFI	GGGAC	4 cut(s)	813, 1165, 1257, 2293
BsmI	GAATGC	2 cut(s)	1565, 1861
Bso31I	GGTCTC	4 cut(s)	322, 813, 1453, 2326
BsoBI	CYCGRG	3 cut(s)	752, 830, 1325
Bsp119I	TTCGAA	1 cut(s)	1569
Bsp1286I	GDGCHC	3 cut(s)	543, 1341, 1590
Bsp143I	GATC	6 cut(s)	457, 495, 610, 636, 795, 1597
Bsp19I	CCATGG	1 cut(s)	1701
BspCNI	CTCAG	2 cut(s)	703, 2230
BspDI	ATCGAT	1 cut(s)	456
BspFNI	CGCG	4 cut(s)	262, 503, 1364, 1371
BspHI	TCATGA	1 cut(s)	384
BspLI	GGNNCC	8 cut(s)	450, 542, 829, 1357, 1696, 1806, 1885, 1923
BspMAI	CTGCAG	2 cut(s)	840, 1860
BspMI	ACCTGC	1 cut(s)	1260
BspPI	GGATC	4 cut(s)	452, 618, 644, 790
BspT104I	TTCGAA	1 cut(s)	1569
BspT107I	GGYRCC	2 cut(s)	1355, 1921
BspTI	CTTAAG	1 cut(s)	2285
BspTNI	GGTCTC	4 cut(s)	322, 813, 1453, 2326
BsrBI	CCGCTC	2 cut(s)	768, 1457
BsrDI	GCAATG	1 cut(s)	55
BsrFI	RCCGGY	4 cut(s)	1685, 1812, 1880, 1964
BsrI	ACTGG	5 cut(s)	350, 947, 1856, 2159, 2268
BssAI	RCCGGY	4 cut(s)	1685, 1812, 1880, 1964
BssMI	GATC	6 cut(s)	457, 495, 610, 636, 795, 1597
BssNI	GRCGYC	4 cut(s)	389, 876, 1875, 1890
BssT1I	CCWWGG	3 cut(s)	106, 823, 1701
Bst2UI	CCWGG	5 cut(s)	634, 926, 1022, 1046, 1559
Bst4CI	ACNGT	5 cut(s)	239, 604, 883, 1939, 2042
Bst6I	CTCTTC	6 cut(s)	155, 554, 809, 811, 1206, 1233
BstACI	GRCGYC	4 cut(s)	389, 876, 1875, 1890
BstAFI	CTTAAG	1 cut(s)	2285
BstBI	TTCGAA	1 cut(s)	1569
BstC8I	GCNNGC	1 cut(s)	2035
BstDEI	CTNAG	2 cut(s)	690, 2217
BstDSI	CCRYGG	4 cut(s)	627, 1701, 1779, 2112
BstEII	GGTNACC	1 cut(s)	908
BstF5I	GGATG	6 cut(s)	660, 696, 1017, 1106, 1554, 2244
BstFNI	CGCG	4 cut(s)	262, 503, 1364, 1371
BstHHI	GCGC	3 cut(s)	1277, 1366, 1371
BstKTI	GATC	6 cut(s)	460, 498, 613, 639, 798, 1600
BstMBI	GATC	6 cut(s)	457, 495, 610, 636, 795, 1597
BstMCI	CGRYCG	2 cut(s)	146, 1116
BstNI	CCWGG	5 cut(s)	634, 926, 1022, 1046, 1559
BstPAI	GACNNNNGTC	2 cut(s)	825, 1956
BstPI	GGTNACC	1 cut(s)	908
BstSFI	CTRYAG	2 cut(s)	836, 1856
BstSLI	GKGCMC	1 cut(s)	1590
BstUI	CGCG	4 cut(s)	262, 503, 1364, 1371
BstV2I	GAAGAC	4 cut(s)	885, 1492, 1584, 2277
BstX2I	RGATCY	1 cut(s)	1597
BstXI	CCANNNNNNTGG	1 cut(s)	2177
BstYI	RGATCY	1 cut(s)	1597
BstZI	CGGCCG	1 cut(s)	1113
Bsu15I	ATCGAT	1 cut(s)	456
BsuTUI	ATCGAT	1 cut(s)	456
BtgI	CCRYGG	4 cut(s)	627, 1701, 1779, 2112
BtrI	CACGTC	1 cut(s)	2065
BtsCI	GGATG	6 cut(s)	660, 696, 1017, 1106, 1554, 2244
BtsI	GCAGTG	1 cut(s)	1137
BtsIMutI	CAGTG	4 cut(s)	879, 1137, 1849, 2261
BveI	ACCTGC	1 cut(s)	1260
Cac8I	GCNNGC	1 cut(s)	2035
CaiI	CAGNNNCTG	1 cut(s)	1419
CciI	TCATGA	1 cut(s)	384
CfoI	GCGC	3 cut(s)	1277, 1366, 1371
Cfr10I	RCCGGY	4 cut(s)	1685, 1812, 1880, 1964
Cfr13I	GGNCC	6 cut(s)	449, 827, 1656, 1664, 1804, 2120
Cfr9I	CCCGGG	1 cut(s)	830
ClaI	ATCGAT	1 cut(s)	456
CseI	GACGC	2 cut(s)	1715, 1898
Csp6I	GTAC	5 cut(s)	353, 588, 757, 1190, 2257
CspAI	ACCGGT	1 cut(s)	1685
CviAII	CATG	5 cut(s)	299, 385, 914, 1396, 1702
CviQI	GTAC	5 cut(s)	353, 588, 757, 1190, 2257
DdeI	CTNAG	2 cut(s)	690, 2217
DpnI	GATC	6 cut(s)	459, 497, 612, 638, 797, 1599
DpnII	GATC	6 cut(s)	457, 495, 610, 636, 795, 1597
DraIII	CACNNNGTG	2 cut(s)	916, 2068
EaeI	YGGCCR	3 cut(s)	1113, 1542, 1625
EagI	CGGCCG	1 cut(s)	1113
Eam1104I	CTCTTC	6 cut(s)	155, 554, 809, 811, 1206, 1233
EarI	CTCTTC	6 cut(s)	155, 554, 809, 811, 1206, 1233
EciI	GGCGGA	5 cut(s)	613, 1441, 1477, 1667, 1799
Ecl136II	GAGCTC	1 cut(s)	1339
EclXI	CGGCCG	1 cut(s)	1113
Eco130I	CCWWGG	3 cut(s)	106, 823, 1701
Eco147I	AGGCCT	1 cut(s)	1617
Eco24I	GRGCYC	2 cut(s)	543, 1341
Eco31I	GGTCTC	4 cut(s)	322, 813, 1453, 2326
Eco47I	GGWCC	3 cut(s)	449, 827, 1804
Eco52I	CGGCCG	1 cut(s)	1113
Eco53kI	GAGCTC	1 cut(s)	1339
Eco88I	CYCGRG	3 cut(s)	752, 830, 1325
Eco91I	GGTNACC	1 cut(s)	908
EcoICRI	GAGCTC	1 cut(s)	1339
EcoO109I	RGGNCCY	2 cut(s)	449, 827
EcoO65I	GGTNACC	1 cut(s)	908
EcoRII	CCWGG	5 cut(s)	632, 924, 1020, 1044, 1557
EcoT14I	CCWWGG	3 cut(s)	106, 823, 1701
EcoT38I	GRGCYC	2 cut(s)	543, 1341
ErhI	CCWWGG	3 cut(s)	106, 823, 1701
Esp3I	CGTCTC	4 cut(s)	573, 685, 1227, 1489
FaeI	CATG	5 cut(s)	302, 388, 917, 1399, 1705
FaqI	GGGAC	4 cut(s)	813, 1165, 1257, 2293
FatI	CATG	5 cut(s)	298, 384, 913, 1395, 1701
FauI	CCCGC	3 cut(s)	526, 795, 2194
FblI	GTMKAC	1 cut(s)	1124
FokI	GGATG	6 cut(s)	647, 683, 1004, 1093, 1541, 2251
FriOI	GRGCYC	2 cut(s)	543, 1341
FspBI	CTAG	8 cut(s)	585, 1073, 1409, 1691, 1712, 1754, 1976, 2108
GlaI	GCGC	3 cut(s)	1276, 1365, 1370
GsaI	CCCAGC	3 cut(s)	23, 448, 1172
GsuI	CTGGAG	1 cut(s)	2176
HgaI	GACGC	2 cut(s)	1715, 1898
HhaI	GCGC	3 cut(s)	1277, 1366, 1371
Hin1I	GRCGYC	4 cut(s)	389, 876, 1875, 1890
Hin1II	CATG	5 cut(s)	302, 388, 917, 1399, 1705
Hin6I	GCGC	3 cut(s)	1275, 1364, 1369
HinP1I	GCGC	3 cut(s)	1275, 1364, 1369
HindIII	AAGCTT	1 cut(s)	2288
Hpy166II	GTNNAC	5 cut(s)	1054, 1125, 1588, 1849, 2259
Hpy188III	TCNNGA	8 cut(s)	385, 393, 614, 700, 848, 1327, 1601, 1712
Hpy8I	GTNNAC	5 cut(s)	1054, 1125, 1588, 1849, 2259
Hpy99I	CGWCG	6 cut(s)	644, 1844, 1877, 1892, 2069, 2128
HpyAV	CCTTC	4 cut(s)	1501, 1783, 2256, 2375
HpyCH4III	ACNGT	5 cut(s)	239, 604, 883, 1939, 2042
HpyCH4IV	ACGT	8 cut(s)	389, 566, 678, 705, 876, 1674, 1875, 2064
HpyF3I	CTNAG	2 cut(s)	690, 2217
HpySE526I	ACGT	8 cut(s)	389, 566, 678, 705, 876, 1674, 1875, 2064
Hsp92I	GRCGYC	4 cut(s)	389, 876, 1875, 1890
Hsp92II	CATG	5 cut(s)	302, 388, 917, 1399, 1705
HspAI	GCGC	3 cut(s)	1275, 1364, 1369
Kzo9I	GATC	6 cut(s)	457, 495, 610, 636, 795, 1597
LweI	GCATC	2 cut(s)	654, 1206
MaeI	CTAG	8 cut(s)	585, 1073, 1409, 1691, 1712, 1754, 1976, 2108
MaeII	ACGT	8 cut(s)	389, 566, 678, 705, 876, 1674, 1875, 2064
MaeIII	GTNAC	8 cut(s)	23, 877, 908, 1004, 1320, 1876, 1933, 1958
MalI	GATC	6 cut(s)	459, 497, 612, 638, 797, 1599
MbiI	CCGCTC	2 cut(s)	768, 1457
MboI	GATC	6 cut(s)	457, 495, 610, 636, 795, 1597
MflI	RGATCY	1 cut(s)	1597
MhlI	GDGCHC	3 cut(s)	543, 1341, 1590
MluCI	AATT	3 cut(s)	216, 244, 370
MlyI	GAGTC	6 cut(s)	845, 1130, 1966, 2015, 2209, 2275
MmeI	TCCRAC	6 cut(s)	123, 345, 390, 879, 1911, 2276
MroXI	GAANNNNTTC	1 cut(s)	169
MseI	TTAA	2 cut(s)	1733, 2286
MslI	CAYNNNNRTG	3 cut(s)	335, 383, 2264
MspA1I	CMGCKG	3 cut(s)	45, 841, 906
MspCI	CTTAAG	1 cut(s)	2285
MteI	GCGCNGCGC	1 cut(s)	1367
Mva1269I	GAATGC	2 cut(s)	1565, 1861
MvaI	CCWGG	5 cut(s)	634, 926, 1022, 1046, 1559
MvnI	CGCG	4 cut(s)	262, 503, 1364, 1371
NcoI	CCATGG	1 cut(s)	1701
NdeII	GATC	6 cut(s)	457, 495, 610, 636, 795, 1597
NlaIII	CATG	5 cut(s)	302, 388, 917, 1399, 1705
NlaIV	GGNNCC	8 cut(s)	450, 542, 829, 1357, 1696, 1806, 1885, 1923
NmeAIII	GCCGAG	2 cut(s)	1144, 1988
NmuCI	GTSAC	6 cut(s)	23, 877, 908, 1876, 1933, 1958
NspV	TTCGAA	1 cut(s)	1569
OliI	CACNNNNGTG	1 cut(s)	2264
PaeR7I	CTCGAG	2 cut(s)	752, 1325
PagI	TCATGA	1 cut(s)	384
PaqCI	CACCTGC	1 cut(s)	1260
PceI	AGGCCT	1 cut(s)	1617
PcsI	WCGNNNNNNNCGW	2 cut(s)	386, 1332
PctI	GAATGC	2 cut(s)	1565, 1861
PdmI	GAANNNNTTC	1 cut(s)	169
PfeI	GAWTC	5 cut(s)	481, 844, 1428, 1509, 2095
PflFI	GACNNNGTC	1 cut(s)	38
PflMI	CCANNNNNTGG	1 cut(s)	633
PfoI	TCCNGGA	1 cut(s)	1557
PinAI	ACCGGT	1 cut(s)	1685
PleI	GAGTC	6 cut(s)	845, 1129, 1965, 2015, 2209, 2275
PpsI	GAGTC	6 cut(s)	845, 1129, 1965, 2015, 2209, 2275
PpuMI	RGGWCCY	2 cut(s)	449, 827
PshAI	GACNNNNGTC	2 cut(s)	825, 1956
Psp124BI	GAGCTC	1 cut(s)	1341
Psp5II	RGGWCCY	2 cut(s)	449, 827
Psp6I	CCWGG	5 cut(s)	632, 924, 1020, 1044, 1557
PspEI	GGTNACC	1 cut(s)	908
PspFI	CCCAGC	3 cut(s)	19, 444, 1168
PspGI	CCWGG	5 cut(s)	632, 924, 1020, 1044, 1557
PspN4I	GGNNCC	8 cut(s)	450, 542, 829, 1357, 1696, 1806, 1885, 1923
PspPI	GGNCC	6 cut(s)	449, 827, 1656, 1664, 1804, 2120
PspPPI	RGGWCCY	2 cut(s)	449, 827
PspXI	VCTCGAGB	1 cut(s)	752
PstI	CTGCAG	2 cut(s)	840, 1860
PstNI	CAGNNNCTG	1 cut(s)	1419
PsuI	RGATCY	1 cut(s)	1597
PsyI	GACNNNGTC	1 cut(s)	38
PvuII	CAGCTG	1 cut(s)	841
RsaI	GTAC	5 cut(s)	354, 589, 758, 1191, 2258
RsaNI	GTAC	5 cut(s)	353, 588, 757, 1190, 2257
RseI	CAYNNNNRTG	3 cut(s)	335, 383, 2264
SacI	GAGCTC	1 cut(s)	1341
SaqAI	TTAA	2 cut(s)	1733, 2286
Sau3AI	GATC	6 cut(s)	457, 495, 610, 636, 795, 1597
Sau96I	GGNCC	6 cut(s)	449, 827, 1656, 1664, 1804, 2120
SchI	GAGTC	6 cut(s)	845, 1130, 1966, 2015, 2209, 2275
SduI	GDGCHC	3 cut(s)	543, 1341, 1590
SfaNI	GCATC	2 cut(s)	654, 1206
SfcI	CTRYAG	2 cut(s)	836, 1856
SfiI	GGCCNNNNNGGCC	1 cut(s)	1663
Sfr274I	CTCGAG	2 cut(s)	752, 1325
SfuI	TTCGAA	1 cut(s)	1569
SinI	GGWCC	3 cut(s)	449, 827, 1804
SlaI	CTCGAG	2 cut(s)	752, 1325
SmaI	CCCGGG	1 cut(s)	832
SmiMI	CAYNNNNRTG	3 cut(s)	335, 383, 2264
SmlI	CTYRAG	4 cut(s)	752, 1325, 1954, 2285
SmoI	CTYRAG	4 cut(s)	752, 1325, 1954, 2285
SpeI	ACTAGT	2 cut(s)	584, 1408
Sse9I	AATT	3 cut(s)	216, 244, 370
SseBI	AGGCCT	1 cut(s)	1617
SspMI	CTAG	8 cut(s)	585, 1073, 1409, 1691, 1712, 1754, 1976, 2108
SstI	GAGCTC	1 cut(s)	1341
StuI	AGGCCT	1 cut(s)	1617
StyI	CCWWGG	3 cut(s)	106, 823, 1701
TaaI	ACNGT	5 cut(s)	239, 604, 883, 1939, 2042
TaiI	ACGT	8 cut(s)	392, 569, 681, 708, 879, 1677, 1878, 2067
TaqII	GACCGA	1 cut(s)	132
TasI	AATT	3 cut(s)	216, 244, 370
TauI	GCSGC	9 cut(s)	48, 503, 531, 784, 1118, 1222, 1379, 1457, 1669
TfiI	GAWTC	5 cut(s)	481, 844, 1428, 1509, 2095
Tru1I	TTAA	2 cut(s)	1733, 2286
Tru9I	TTAA	2 cut(s)	1733, 2286
TscAI	CASTG	4 cut(s)	886, 1144, 1856, 2268
TseFI	GTSAC	6 cut(s)	23, 877, 908, 1876, 1933, 1958
Tsp45I	GTSAC	6 cut(s)	23, 877, 908, 1876, 1933, 1958
TspDTI	ATGAA	2 cut(s)	935, 1959
TspGWI	ACGGA	2 cut(s)	1521, 1752
TspMI	CCCGGG	1 cut(s)	830
TspRI	CASTG	4 cut(s)	886, 1144, 1856, 2268
Tth111I	GACNNNGTC	1 cut(s)	38
Van91I	CCANNNNNTGG	1 cut(s)	633
Vha464I	CTTAAG	1 cut(s)	2285
VneI	GTGCAC	1 cut(s)	1586
VpaK11BI	GGWCC	3 cut(s)	449, 827, 1804
XbaI	TCTAGA	1 cut(s)	1711
XhoI	CTCGAG	2 cut(s)	752, 1325
XmaI	CCCGGG	1 cut(s)	830
XmiI	GTMKAC	1 cut(s)	1124
XmnI	GAANNNNTTC	1 cut(s)	169
XspI	CTAG	8 cut(s)	585, 1073, 1409, 1691, 1712, 1754, 1976, 2108
ZraI	GACGTC	3 cut(s)	390, 877, 1876

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.