Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0014426

Physical Location & Seq

Genomic Coordinates Forward (+)

41946657 .. 41949442

Gene Structure 2786 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025096

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGGCTGCTTGTGCTTTGCTGGGTGACAATGGCGACCATGTCAGCGGCAATGGAAGCAACAACAACAACAGCCCATTGAACTCCAACAGCCAAGGAAGCAGCGTAGTCGAGCAGCAGAACCCGGCTCGGTCGAAAATGGTGAGGAAGAGAATGGCTTCAGAGATTGAAGTGCAGCCCACCAACAACACCAACTCAATCAGAATTAGCAGCAGCAACAATAACGGTGATAATTATATGAGGGTTTCGCGTAATCGGAGCGTTATTCTAAATCCAAACCCGACCCATGACAAAGTGAATATGGTCTCCAACTACTCCACCACTATGCTCAATCTACCGGTACCATCATCTTCCAACAATTTGACCACGCTCATGACGTCAGGAGGTGGTGGGGTTTTATCAACTGCTTCCGCTTCTTCTTCCCCTCCAAGCTGGGGTCCTATCGATCCCTTGTCGCTCCATCACCCGCTTCACCAGACCCAGATCGCAGCCACCACTCCTCCTCCAGCCGTCTGCGGCTTTTCGGGGCTCCCTCTCTTCCCACCGGAAAGAACTTCTCCTCCGAATCATACTAGTCCCACGCTTTCTACCGTCATGGATCAAGACAGCTCCGCCACGGCCTGGATCGACGGCATCATAAAAGACCTCATCCACAGCTCCACCAACGTCTCCATTCCTCAGCTCATCCAGAACGTCAGAGAGATAATCTTCCCTTGCAATCCCAACCTCGCTTCGCTTCTCGAGTTCCGCCTCCGCTCCATATCCGAGCCGCCCCCGCCTCCGATCCCAATCTTCAACAGAAGAAGAGACCAAGGCCCGGCGCTGCAGCTGAATCTCGACTCTAACTCCTCCGGCATAAATGACGTCACTGTTTTCCCGTCTTCAACTACCAGCGGTCACTCTGGTCATCACCATGTGATGAACCAGGAGTTGTTTTTGAACTGGGGAGACACCCTACCCCAACAACAACAGCAGCAACAACCCAACCCTACATCTTCCCCTACTTGCAACGAAAGCAACCTCCAGGCTCAGCACCACCACATTTCCCAGGCGGTTCAGCCACAACAACAAACACTCGATAAGCAGCAGCAACAAAACTCTCCATCCCCGGCCGCCGAGTCTACACATGCCACCACTGCACCACCACCCACTGCTACAGCCCCAACGACGCCGTCACCGGTGGTACTAATGCGAGAGAAGAAAGAAGAGATGCGGCAGCAGAAGCGAGACGAAGAGGGACTGCACCTGCTCACCTTACTCCTCCAATGCGCCGAAGCTGTGTCCGCAGATAACTTTGAAGAAGCAACCAAAATGTTACTCGAGATTTCCGAGCTCTCAACCCCGTTCGGCACCTCCGCCCAGCGCGTGGCGGCCTACTTCTCCGAGGCCATGTCAGCGAGACTAGTCAGCTCCTGTCTCGGATTCTACGCCTCCCTCCCGGTCTCCGCCGCTCCCATCACCCATTCCCAGAAGCTCGTCTCCGCCTTCCAAGTCTTCAACGGAATCAGCCCCTTCGTGAAGTTCTCCCATTTCACGGCCAACCAAGCCATCCAGGAAGCATTCGAAAGAGAAGACCAGGTGCACATAGTAGATCTCGACATAATGCAAGGCCTGCAATGGCCGGGGCTGTTCCACATTCTCGCCTCCCGGCCCGGTGGGCCGCCCTACGTCCGCCTCACCGGTCTCGGAACCTCCATGGAGGCTCTAGAAGCCACCGGAAAACGCTTAACCGACTTCGCCGACAAGCTAGGGCTTCCGTTCGAGTTCTTTCCCTTGGCAGAGAAGGTAGGCAGTTTGGACCCTGACCGGCTCAACATAAGCAAGAGAGAGGCCGTCGCCGTCCACTGGCTGCAGCATTCTCTTTACGACGTCACCGGCTCCGACGCCAACACGCTCTGGCTTTTGCAGAGATTGGCACCAAAAGTAGTGACGGTGGTGGAGCAGGACTTGAGTCATGCCGGTTCATTTTTAGGGAGGTTTGTAGAGGCCATACACTACTACTCGGCCTTGTTCGACTCTTTGGGTGCAAGCTACGGTGAAGAAAGCGAGGAGAGGCACGTCGTGGAGCAGCAGCTTTTGTCGAGGGAGATTCGGAATGTTCTAGCCGTGGGAGGCCCGTCGAGGAGTGGAGAAGTGAAGTTCCATAACTGGAGGGAGAAGTTCCAGCAAAGTGGGTTCAGGGGGATTTCTTTGGCGGGAAATGCAGCGACTCAGGCAACCTTGCTGCTTGGGATGTTCCCTTCTGATGGGTACACATTGGTGGAAGACAATGGGACTCTTAAGCTTGGTTGGAAAGACCTTTGTTTGCTGACTGCTTCGGCTTGGAGACCACCTTATCATGCTACTACCAACCCCAACCTTCACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001708 GO:0003002 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008104 GO:0008150 GO:0008356 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009889 GO:0009956 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032507 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045165 GO:0045185 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051179 GO:0051235 GO:0051252 GO:0051301 GO:0051457 GO:0051641 GO:0051651 GO:0060255 GO:0065007 GO:0065008 GO:0070727 GO:0072595 GO:0080090 GO:0090610 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

789

Amino Acids

85.88

Weight (kDa)

5.95

Isoelectric Point (pI)

57.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	416 - 775	7.8e-130	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54220
fragaria_vesca	FvH4_6g09040
malus_domestica	MD04G1181500.v1.1 MD12G1196300.v1.1
prunus_persica	Prupe.6G300900_v2.0.a1
pyrus_communis	pycom04g16040 pycom12g18250
rosa_chinensis	RchiOBHm_Chr3g0459291
rosa_laevigata	RLG00000025096
rosa_multiflora	Rmu_sc0012999.1_g000002
rosa_roxburghii	Rroxscaffold_6G00420330
rosa_rugosa	Rorug03G0035100
rosa_samantha	Rh3AG092900 Rh3BG096000 Rh3CG097000 Rh3DG096600
rosa_wichuraiana	Rw3G007990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1251
AatII	GACGTC	3 cut(s)	377, 864, 1869
Acc36I	ACCTGC	1 cut(s)	1251
Acc65I	GGTACC	1 cut(s)	337
AccB1I	GGYRCC	3 cut(s)	337, 1346, 1912
AccB7I	CCANNNNNTGG	2 cut(s)	618, 1363
AccBSI	CCGCTC	2 cut(s)	753, 1448
AccI	GTMKAC	1 cut(s)	1118
AccII	CGCG	2 cut(s)	247, 1362
AclWI	GGATC	4 cut(s)	437, 603, 629, 775
AcoI	YGGCCR	3 cut(s)	1107, 1533, 1616
AcuI	CTGAAG	1 cut(s)	141
AcyI	GRCGYC	5 cut(s)	374, 861, 1166, 1866, 1881
AdeI	CACNNNGTG	2 cut(s)	913, 2059
AfaI	GTAC	3 cut(s)	339, 1182, 2249
AfiI	CCNNNNNNNGG	7 cut(s)	431, 618, 814, 1363, 1531, 1842, 2243
AflII	CTTAAG	1 cut(s)	2276
AgeI	ACCGGT	3 cut(s)	334, 1174, 1676
AgsI	TTSAA	7 cut(s)	79, 167, 793, 882, 937, 1295, 1495
AhlI	ACTAGT	2 cut(s)	569, 1399
AjiI	CACGTC	1 cut(s)	2056
AjnI	CCWGG	6 cut(s)	617, 921, 1020, 1044, 1548, 1572
AleI	CACNNNNGTG	1 cut(s)	2255
AloI	GAACNNNNNNTCC	2 cut(s)	541, 573
Alw21I	GWGCWC	2 cut(s)	1332, 1581
Alw44I	GTGCAC	1 cut(s)	1577
AlwI	GGATC	4 cut(s)	437, 603, 629, 775
AlwNI	CAGNNNCTG	1 cut(s)	1410
Ama87I	CYCGRG	2 cut(s)	737, 1316
ApaLI	GTGCAC	1 cut(s)	1577
AsiGI	ACCGGT	3 cut(s)	334, 1174, 1676
Asp700I	GAANNNNTTC	1 cut(s)	154
Asp718I	GGTACC	1 cut(s)	337
AspLEI	GCGC	3 cut(s)	820, 1268, 1362
AspS9I	GGNCC	6 cut(s)	434, 812, 1647, 1655, 1795, 2111
AsuC2I	CCSGG	7 cut(s)	122, 815, 1106, 1436, 1620, 1645, 1650
AsuII	TTCGAA	1 cut(s)	1560
AvaI	CYCGRG	2 cut(s)	737, 1316
AvaII	GGWCC	2 cut(s)	434, 1795
BaeGI	GKGCMC	1 cut(s)	1581
BanI	GGYRCC	3 cut(s)	337, 1346, 1912
BanII	GRGCYC	2 cut(s)	528, 1332
BbsI	GAAGAC	4 cut(s)	870, 1483, 1575, 2268
Bbv12I	GWGCWC	2 cut(s)	1332, 1581
BbvCI	CCTCAGC	1 cut(s)	675
BccI	CCATC	6 cut(s)	349, 465, 1108, 1460, 1553, 2237
BceAI	ACGGC	8 cut(s)	491, 630, 643, 1153, 1548, 1814, 1820, 2087
BcgI	CGANNNNNNTGC	2 cut(s)	88, 122
BciT130I	CCWGG	6 cut(s)	619, 923, 1022, 1046, 1550, 1574
BcnI	CCSGG	7 cut(s)	122, 815, 1106, 1436, 1620, 1645, 1650
BcuI	ACTAGT	2 cut(s)	569, 1399
BfaI	CTAG	5 cut(s)	570, 1400, 1703, 1745, 2099
BfmI	CTRYAG	3 cut(s)	821, 1152, 1847
BfoI	RGCGCY	1 cut(s)	821
BfrI	CTTAAG	1 cut(s)	2276
BfuAI	ACCTGC	1 cut(s)	1251
BglI	GCCNNNNNGGC	1 cut(s)	1654
BglII	AGATCT	1 cut(s)	1588
BlpI	GCTNAGC	1 cut(s)	1026
Bme18I	GGWCC	2 cut(s)	434, 1795
BmeT110I	CYCGRG	2 cut(s)	737, 1316
BmgBI	CACGTC	1 cut(s)	2056
BmgT120I	GGNCC	6 cut(s)	434, 812, 1647, 1655, 1795, 2111
BmiI	GGNNCC	8 cut(s)	339, 435, 527, 1348, 1687, 1797, 1876, 1914
BmrI	ACTGGG	1 cut(s)	949
BmsI	GCATC	2 cut(s)	639, 1197
BmuI	ACTGGG	1 cut(s)	949
BoxI	GACNNNNGTC	1 cut(s)	1947
BpiI	GAAGAC	4 cut(s)	870, 1483, 1575, 2268
BpmI	CTGGAG	3 cut(s)	486, 1004, 2167
Bpu10I	CCTNAGC	1 cut(s)	675
Bpu1102I	GCTNAGC	1 cut(s)	1026
Bpu14I	TTCGAA	1 cut(s)	1560
BpuEI	CTTGAG	1 cut(s)	1966
BpuMI	CCSGG	7 cut(s)	122, 815, 1106, 1436, 1620, 1645, 1650
Bsa29I	ATCGAT	1 cut(s)	441
BsaBI	GATNNNNATC	1 cut(s)	785
BsaHI	GRCGYC	5 cut(s)	374, 861, 1166, 1866, 1881
BsaI	GGTCTC	5 cut(s)	307, 798, 1444, 1685, 2317
BsaWI	WCCGGW	5 cut(s)	334, 541, 1174, 1676, 1712
BsaXI	ACNNNNNCTCC	8 cut(s)	481, 484, 511, 514, 541, 571, 827, 857
Bsc4I	CCNNNNNNNGG	7 cut(s)	431, 618, 814, 1363, 1531, 1842, 2243
Bse118I	RCCGGY	6 cut(s)	334, 1174, 1676, 1803, 1871, 1955
Bse1I	ACTGG	3 cut(s)	944, 1847, 2150
Bse3DI	GCAATG	2 cut(s)	55, 1619
Bse8I	GATNNNNATC	1 cut(s)	785
BseBI	CCWGG	6 cut(s)	619, 923, 1022, 1046, 1550, 1574
BseCI	ATCGAT	1 cut(s)	441
BseGI	GGATG	5 cut(s)	645, 681, 1100, 1545, 2235
BseJI	GATNNNNATC	1 cut(s)	785
BseLI	CCNNNNNNNGG	7 cut(s)	431, 618, 814, 1363, 1531, 1842, 2243
BseMI	GCAATG	2 cut(s)	55, 1619
BseMII	CTCAG	3 cut(s)	689, 1040, 2222
BseNI	ACTGG	3 cut(s)	944, 1847, 2150
BseRI	GAGGAG	7 cut(s)	486, 489, 546, 835, 1247, 2060, 2134
BseSI	GKGCMC	1 cut(s)	1581
BseX3I	CGGCCG	1 cut(s)	1107
BseYI	CCCAGC	3 cut(s)	19, 429, 1356
BsgI	GTGCAG	3 cut(s)	191, 1119, 1223
Bsh1236I	CGCG	2 cut(s)	247, 1362
Bsh1285I	CGRYCG	2 cut(s)	131, 1110
BshNI	GGYRCC	3 cut(s)	337, 1346, 1912
BshTI	ACCGGT	3 cut(s)	334, 1174, 1676
BshVI	ATCGAT	1 cut(s)	441
BsiEI	CGRYCG	2 cut(s)	131, 1110
BsiHKAI	GWGCWC	2 cut(s)	1332, 1581
BsiHKCI	CYCGRG	2 cut(s)	737, 1316
BslFI	GGGAC	3 cut(s)	558, 1248, 2284
BslI	CCNNNNNNNGG	7 cut(s)	431, 618, 814, 1363, 1531, 1842, 2243
BsmBI	CGTCTC	3 cut(s)	670, 1218, 1480
BsmFI	GGGAC	3 cut(s)	558, 1248, 2284
BsmI	GAATGC	2 cut(s)	1556, 1852
Bso31I	GGTCTC	5 cut(s)	307, 798, 1444, 1685, 2317
BsoBI	CYCGRG	2 cut(s)	737, 1316
Bsp119I	TTCGAA	1 cut(s)	1560
Bsp1286I	GDGCHC	3 cut(s)	528, 1332, 1581
Bsp143I	GATC	6 cut(s)	442, 480, 595, 621, 780, 1588
Bsp1720I	GCTNAGC	1 cut(s)	1026
Bsp19I	CCATGG	1 cut(s)	1692
BspCNI	CTCAG	3 cut(s)	688, 1039, 2221
BspDI	ATCGAT	1 cut(s)	441
BspFNI	CGCG	2 cut(s)	247, 1362
BspHI	TCATGA	1 cut(s)	369
BspLI	GGNNCC	8 cut(s)	339, 435, 527, 1348, 1687, 1797, 1876, 1914
BspMAI	CTGCAG	2 cut(s)	825, 1851
BspMI	ACCTGC	1 cut(s)	1251
BspPI	GGATC	4 cut(s)	437, 603, 629, 775
BspT104I	TTCGAA	1 cut(s)	1560
BspT107I	GGYRCC	3 cut(s)	337, 1346, 1912
BspTI	CTTAAG	1 cut(s)	2276
BspTNI	GGTCTC	5 cut(s)	307, 798, 1444, 1685, 2317
BsrBI	CCGCTC	2 cut(s)	753, 1448
BsrDI	GCAATG	2 cut(s)	55, 1619
BsrFI	RCCGGY	6 cut(s)	334, 1174, 1676, 1803, 1871, 1955
BsrI	ACTGG	3 cut(s)	944, 1847, 2150
BssAI	RCCGGY	6 cut(s)	334, 1174, 1676, 1803, 1871, 1955
BssMI	GATC	6 cut(s)	442, 480, 595, 621, 780, 1588
BssNI	GRCGYC	5 cut(s)	374, 861, 1166, 1866, 1881
BssT1I	CCWWGG	4 cut(s)	91, 808, 1692, 1770
Bst2UI	CCWGG	6 cut(s)	619, 923, 1022, 1046, 1550, 1574
Bst4CI	ACNGT	5 cut(s)	224, 589, 868, 1930, 2033
Bst6I	CTCTTC	5 cut(s)	140, 539, 796, 1197, 1224
BstACI	GRCGYC	5 cut(s)	374, 861, 1166, 1866, 1881
BstAFI	CTTAAG	1 cut(s)	2276
BstAPI	GCANNNNNTGC	1 cut(s)	1609
BstBI	TTCGAA	1 cut(s)	1560
BstC8I	GCNNGC	2 cut(s)	1610, 2026
BstDEI	CTNAG	3 cut(s)	675, 1026, 2208
BstDSI	CCRYGG	3 cut(s)	612, 1692, 2103
BstF5I	GGATG	5 cut(s)	645, 681, 1100, 1545, 2235
BstFNI	CGCG	2 cut(s)	247, 1362
BstH2I	RGCGCY	1 cut(s)	821
BstHHI	GCGC	3 cut(s)	820, 1268, 1362
BstKTI	GATC	6 cut(s)	445, 483, 598, 624, 783, 1591
BstMBI	GATC	6 cut(s)	442, 480, 595, 621, 780, 1588
BstMCI	CGRYCG	2 cut(s)	131, 1110
BstNI	CCWGG	6 cut(s)	619, 923, 1022, 1046, 1550, 1574
BstNSI	RCATGY	1 cut(s)	1127
BstPAI	GACNNNNGTC	1 cut(s)	1947
BstSFI	CTRYAG	3 cut(s)	821, 1152, 1847
BstSLI	GKGCMC	1 cut(s)	1581
BstUI	CGCG	2 cut(s)	247, 1362
BstV2I	GAAGAC	4 cut(s)	870, 1483, 1575, 2268
BstX2I	RGATCY	1 cut(s)	1588
BstXI	CCANNNNNNTGG	1 cut(s)	2168
BstYI	RGATCY	1 cut(s)	1588
BstZI	CGGCCG	1 cut(s)	1107
Bsu15I	ATCGAT	1 cut(s)	441
BsuTUI	ATCGAT	1 cut(s)	441
BtgI	CCRYGG	3 cut(s)	612, 1692, 2103
BtrI	CACGTC	1 cut(s)	2056
BtsCI	GGATG	5 cut(s)	645, 681, 1100, 1545, 2235
BtsI	GCAGTG	2 cut(s)	1131, 1146
BtsIMutI	CAGTG	4 cut(s)	864, 1131, 1146, 1840
BveI	ACCTGC	1 cut(s)	1251
Cac8I	GCNNGC	2 cut(s)	1610, 2026
CaiI	CAGNNNCTG	1 cut(s)	1410
CciI	TCATGA	1 cut(s)	369
CfoI	GCGC	3 cut(s)	820, 1268, 1362
Cfr10I	RCCGGY	6 cut(s)	334, 1174, 1676, 1803, 1871, 1955
Cfr13I	GGNCC	6 cut(s)	434, 812, 1647, 1655, 1795, 2111
ClaI	ATCGAT	1 cut(s)	441
CseI	GACGC	2 cut(s)	1174, 1889
CsiI	ACCWGGT	1 cut(s)	1572
Csp6I	GTAC	3 cut(s)	338, 1181, 2248
CspAI	ACCGGT	3 cut(s)	334, 1174, 1676
CviQI	GTAC	3 cut(s)	338, 1181, 2248
DdeI	CTNAG	3 cut(s)	675, 1026, 2208
DpnI	GATC	6 cut(s)	444, 482, 597, 623, 782, 1590
DpnII	GATC	6 cut(s)	442, 480, 595, 621, 780, 1588
DraIII	CACNNNGTG	2 cut(s)	913, 2059
EaeI	YGGCCR	3 cut(s)	1107, 1533, 1616
EagI	CGGCCG	1 cut(s)	1107
Eam1104I	CTCTTC	5 cut(s)	140, 539, 796, 1197, 1224
EarI	CTCTTC	5 cut(s)	140, 539, 796, 1197, 1224
EciI	GGCGGA	6 cut(s)	598, 734, 1342, 1432, 1468, 1658
Ecl136II	GAGCTC	1 cut(s)	1330
EclXI	CGGCCG	1 cut(s)	1107
Eco130I	CCWWGG	4 cut(s)	91, 808, 1692, 1770
Eco147I	AGGCCT	1 cut(s)	1608
Eco24I	GRGCYC	2 cut(s)	528, 1332
Eco31I	GGTCTC	5 cut(s)	307, 798, 1444, 1685, 2317
Eco47I	GGWCC	2 cut(s)	434, 1795
Eco52I	CGGCCG	1 cut(s)	1107
Eco53kI	GAGCTC	1 cut(s)	1330
Eco57I	CTGAAG	1 cut(s)	141
Eco88I	CYCGRG	2 cut(s)	737, 1316
EcoICRI	GAGCTC	1 cut(s)	1330
EcoO109I	RGGNCCY	1 cut(s)	434
EcoRII	CCWGG	6 cut(s)	617, 921, 1020, 1044, 1548, 1572
EcoT14I	CCWWGG	4 cut(s)	91, 808, 1692, 1770
EcoT38I	GRGCYC	2 cut(s)	528, 1332
ErhI	CCWWGG	4 cut(s)	91, 808, 1692, 1770
Esp3I	CGTCTC	3 cut(s)	670, 1218, 1480
FaqI	GGGAC	3 cut(s)	558, 1248, 2284
FauI	CCCGC	3 cut(s)	471, 780, 2185
FblI	GTMKAC	1 cut(s)	1118
FokI	GGATG	5 cut(s)	632, 668, 1087, 1532, 2242
FriOI	GRGCYC	2 cut(s)	528, 1332
FspBI	CTAG	5 cut(s)	570, 1400, 1703, 1745, 2099
GlaI	GCGC	3 cut(s)	819, 1267, 1361
GsaI	CCCAGC	3 cut(s)	23, 433, 1360
GsuI	CTGGAG	3 cut(s)	486, 1004, 2167
HaeII	RGCGCY	1 cut(s)	821
HgaI	GACGC	2 cut(s)	1174, 1889
HhaI	GCGC	3 cut(s)	820, 1268, 1362
Hin1I	GRCGYC	5 cut(s)	374, 861, 1166, 1866, 1881
Hin6I	GCGC	3 cut(s)	818, 1266, 1360
HinP1I	GCGC	3 cut(s)	818, 1266, 1360
HindIII	AAGCTT	1 cut(s)	2279
Hpy166II	GTNNAC	4 cut(s)	1119, 1579, 1840, 2250
Hpy8I	GTNNAC	4 cut(s)	1119, 1579, 1840, 2250
Hpy99I	CGWCG	7 cut(s)	629, 1168, 1835, 1868, 1883, 2060, 2119
HpyAV	CCTTC	5 cut(s)	1492, 1519, 1774, 2247, 2366
HpyCH4III	ACNGT	5 cut(s)	224, 589, 868, 1930, 2033
HpyCH4IV	ACGT	7 cut(s)	374, 663, 690, 861, 1665, 1866, 2055
HpyF3I	CTNAG	3 cut(s)	675, 1026, 2208
HpySE526I	ACGT	7 cut(s)	374, 663, 690, 861, 1665, 1866, 2055
Hsp92I	GRCGYC	5 cut(s)	374, 861, 1166, 1866, 1881
HspAI	GCGC	3 cut(s)	818, 1266, 1360
KpnI	GGTACC	1 cut(s)	341
Kzo9I	GATC	6 cut(s)	442, 480, 595, 621, 780, 1588
LweI	GCATC	2 cut(s)	639, 1197
MabI	ACCWGGT	1 cut(s)	1572
MaeI	CTAG	5 cut(s)	570, 1400, 1703, 1745, 2099
MaeII	ACGT	7 cut(s)	374, 663, 690, 861, 1665, 1866, 2055
MaeIII	GTNAC	7 cut(s)	23, 862, 893, 1170, 1311, 1867, 1924
MalI	GATC	6 cut(s)	444, 482, 597, 623, 782, 1590
MbiI	CCGCTC	2 cut(s)	753, 1448
MboI	GATC	6 cut(s)	442, 480, 595, 621, 780, 1588
MflI	RGATCY	1 cut(s)	1588
MhlI	GDGCHC	3 cut(s)	528, 1332, 1581
MluCI	AATT	3 cut(s)	201, 229, 355
MlyI	GAGTC	6 cut(s)	830, 1124, 1957, 2006, 2200, 2266
MmeI	TCCRAC	5 cut(s)	108, 330, 375, 1902, 2267
MroXI	GAANNNNTTC	1 cut(s)	154
MseI	TTAA	2 cut(s)	1724, 2277
MslI	CAYNNNNRTG	4 cut(s)	320, 368, 909, 2255
MspA1I	CMGCKG	3 cut(s)	45, 826, 891
MspCI	CTTAAG	1 cut(s)	2276
Mva1269I	GAATGC	2 cut(s)	1556, 1852
MvaI	CCWGG	6 cut(s)	619, 923, 1022, 1046, 1550, 1574
MvnI	CGCG	2 cut(s)	247, 1362
NciI	CCSGG	7 cut(s)	122, 815, 1106, 1436, 1620, 1645, 1650
NcoI	CCATGG	1 cut(s)	1692
NdeII	GATC	6 cut(s)	442, 480, 595, 621, 780, 1588
NlaIV	GGNNCC	8 cut(s)	339, 435, 527, 1348, 1687, 1797, 1876, 1914
NmeAIII	GCCGAG	2 cut(s)	1138, 1979
NmuCI	GTSAC	6 cut(s)	23, 862, 893, 1170, 1867, 1924
NspI	RCATGY	1 cut(s)	1127
NspV	TTCGAA	1 cut(s)	1560
OliI	CACNNNNGTG	1 cut(s)	2255
PaeR7I	CTCGAG	2 cut(s)	737, 1316
PagI	TCATGA	1 cut(s)	369
PaqCI	CACCTGC	1 cut(s)	1251
PceI	AGGCCT	1 cut(s)	1608
PcsI	WCGNNNNNNNCGW	2 cut(s)	371, 1323
PctI	GAATGC	2 cut(s)	1556, 1852
PdmI	GAANNNNTTC	1 cut(s)	154
PfeI	GAWTC	5 cut(s)	562, 829, 1419, 1500, 2086
PflFI	GACNNNGTC	2 cut(s)	38, 1168
PflMI	CCANNNNNTGG	2 cut(s)	618, 1363
PfoI	TCCNGGA	1 cut(s)	1548
PinAI	ACCGGT	3 cut(s)	334, 1174, 1676
PleI	GAGTC	6 cut(s)	830, 1123, 1956, 2006, 2200, 2266
PpsI	GAGTC	6 cut(s)	830, 1123, 1956, 2006, 2200, 2266
PpuMI	RGGWCCY	1 cut(s)	434
PshAI	GACNNNNGTC	1 cut(s)	1947
Psp124BI	GAGCTC	1 cut(s)	1332
Psp5II	RGGWCCY	1 cut(s)	434
Psp6I	CCWGG	6 cut(s)	617, 921, 1020, 1044, 1548, 1572
PspFI	CCCAGC	3 cut(s)	19, 429, 1356
PspGI	CCWGG	6 cut(s)	617, 921, 1020, 1044, 1548, 1572
PspN4I	GGNNCC	8 cut(s)	339, 435, 527, 1348, 1687, 1797, 1876, 1914
PspPI	GGNCC	6 cut(s)	434, 812, 1647, 1655, 1795, 2111
PspPPI	RGGWCCY	1 cut(s)	434
PstI	CTGCAG	2 cut(s)	825, 1851
PstNI	CAGNNNCTG	1 cut(s)	1410
PsuI	RGATCY	1 cut(s)	1588
PsyI	GACNNNGTC	2 cut(s)	38, 1168
PvuII	CAGCTG	1 cut(s)	826
RsaI	GTAC	3 cut(s)	339, 1182, 2249
RsaNI	GTAC	3 cut(s)	338, 1181, 2248
RseI	CAYNNNNRTG	4 cut(s)	320, 368, 909, 2255
SacI	GAGCTC	1 cut(s)	1332
SaqAI	TTAA	2 cut(s)	1724, 2277
Sau3AI	GATC	6 cut(s)	442, 480, 595, 621, 780, 1588
Sau96I	GGNCC	6 cut(s)	434, 812, 1647, 1655, 1795, 2111
SchI	GAGTC	6 cut(s)	830, 1124, 1957, 2006, 2200, 2266
SduI	GDGCHC	3 cut(s)	528, 1332, 1581
SexAI	ACCWGGT	1 cut(s)	1572
SfaNI	GCATC	2 cut(s)	639, 1197
SfcI	CTRYAG	3 cut(s)	821, 1152, 1847
SfiI	GGCCNNNNNGGCC	1 cut(s)	1654
Sfr274I	CTCGAG	2 cut(s)	737, 1316
SfuI	TTCGAA	1 cut(s)	1560
SgrAI	CRCCGGYG	1 cut(s)	1174
SinI	GGWCC	2 cut(s)	434, 1795
SlaI	CTCGAG	2 cut(s)	737, 1316
SmiMI	CAYNNNNRTG	4 cut(s)	320, 368, 909, 2255
SmlI	CTYRAG	4 cut(s)	737, 1316, 1945, 2276
SmoI	CTYRAG	4 cut(s)	737, 1316, 1945, 2276
SpeI	ACTAGT	2 cut(s)	569, 1399
Sse9I	AATT	3 cut(s)	201, 229, 355
SseBI	AGGCCT	1 cut(s)	1608
SspMI	CTAG	5 cut(s)	570, 1400, 1703, 1745, 2099
SstI	GAGCTC	1 cut(s)	1332
StuI	AGGCCT	1 cut(s)	1608
StyI	CCWWGG	4 cut(s)	91, 808, 1692, 1770
TaaI	ACNGT	5 cut(s)	224, 589, 868, 1930, 2033
TaiI	ACGT	7 cut(s)	377, 666, 693, 864, 1668, 1869, 2058
TaqII	GACCGA	1 cut(s)	117
TasI	AATT	3 cut(s)	201, 229, 355
TauI	GCSGC	8 cut(s)	48, 516, 769, 1112, 1213, 1370, 1448, 1660
TfiI	GAWTC	5 cut(s)	562, 829, 1419, 1500, 2086
Tru1I	TTAA	2 cut(s)	1724, 2277
Tru9I	TTAA	2 cut(s)	1724, 2277
TscAI	CASTG	4 cut(s)	871, 1138, 1153, 1847
TseFI	GTSAC	6 cut(s)	23, 862, 893, 1170, 1867, 1924
Tsp45I	GTSAC	6 cut(s)	23, 862, 893, 1170, 1867, 1924
TspDTI	ATGAA	2 cut(s)	932, 1950
TspGWI	ACGGA	2 cut(s)	1512, 1743
TspRI	CASTG	4 cut(s)	871, 1138, 1153, 1847
Tth111I	GACNNNGTC	2 cut(s)	38, 1168
Van91I	CCANNNNNTGG	2 cut(s)	618, 1363
Vha464I	CTTAAG	1 cut(s)	2276
VneI	GTGCAC	1 cut(s)	1577
VpaK11BI	GGWCC	2 cut(s)	434, 1795
XbaI	TCTAGA	1 cut(s)	1702
XceI	RCATGY	1 cut(s)	1127
XhoI	CTCGAG	2 cut(s)	737, 1316
XmiI	GTMKAC	1 cut(s)	1118
XmnI	GAANNNNTTC	1 cut(s)	154
XspI	CTAG	5 cut(s)	570, 1400, 1703, 1745, 2099
ZraI	GACGTC	3 cut(s)	375, 862, 1867

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.