FvH4_6g12370

Belongs to the FBPase class 1 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
7476228 .. 7478915
2688 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g12370.t2

Sequence Viewer

Length: 1233 bp
ATGGTTGCAGCAGCAGTAACTCCATCTTCATCCCAACTCTTATGTTCAAGCTCCCGCTCCATTTCTCAGCTCTCTCCTCTGCAACAATGCGTCTTCGGCTCCAAAGCAAGCACTGCCACAACCCCAAACAGCAGCAAGAGAAATAGGGGTGTGGGCAGCGTTGGAGTTAAATGCATGGCGGTGGCAGCTGAAACAGAGCCGAAGAAGAAAACTGCGTACCAGATTACAACCCTGACGAGCTGGTTGCTGGAGCAAGAACAGAAGGGTACCATTGATGCAGAGCTGACCATTGTGCTTTCGAGCATTTCGTTGGCGTGTAAGCAGATTGCTTCGTTGGTACAGAGAGCTAGCATTTCTAACTTGACTGGTGTTCAGGGTGCTGTCAACATTCAAGGAGAGGACCAGAAGAAACTCGATGTCGTCTCCAATGAGGTTTTCTCCAACTGCTTGAGATCGAGTGGACGAACAGGGATCATAGCCTCTGAGGAAGAGGATGTGCCGGTGGCTGTGGAAGAGAGCTATTCTGGAAACTACATTGTGGTGTTTGATCCTCTTGATGGATCATCCAACATTGATGCTGCAGTTTCGACTGGTTCAATCTTCGGAATATACAGCCCAAATGACGAATGCCTAGCTGACATTGATGATGAAAATCTTGACAGTGCTGCACAGAAATGTATAGTGAGTGTGTGTCAGCCAGGAAGCAACCTACTCGCTGCTGGCTACTGTATGTACTCAAGCTCTGTGATATTTGTGCTTACAGTTGGGAAAGGTGTATATGCATTTAGCTTGGACCCCATGTATGGTGAATTCGTTTTGACCCAAGAAAAAGTTCAGATACCAAAAGCAGGAAAGATCTACTCGTTCAATGAGGGAAACTATCAGCTGTGGGATGACAAGTTGAAGAAGTACATTGATGACCTTAAGGACCCAGGTCCGAGTGGCAAGCCCTATTCTGCAAGGTACATTGGTAGTTTGGTTGGGGACTTTCATAGAACGCTTCTCTACGGAGGTATTTATGGGTATCCAAGAGACCGGAAGAGCAAGAATGGAAAGCTGAGGCTACTGTATGAGTGTGCACCGATGAGTTTCATAGTGGAACAAGCTGGGGGGAAAGGATCTGATGGCCATTCCAGAGTACTAGACATTCAGCCAACTGAGATTCATCAGCGCGTTCCCCTTTACATTGGAAGCGTAGATGAGGTGGAGAAGTTGGAGAAGTATTTAGCTTGA

Protein Analysis

411

Amino Acids

44.21

Weight (kDa)

5.25

Isoelectric Point (pI)

38.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBPase PF00316 77 - 276 3.6e-57 Fructose-1-6-bisphosphatase, N-terminal domain
FBPase_C PF18913 280 - 389 1e-41 Fructose-1-6-bisphosphatase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011238)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 266
AccB1I GGYRCC 1 cut(s) 266
AccBSI CCGCTC 1 cut(s) 57
AccII CGCG 1 cut(s) 1173
AciI CCGC 2 cut(s) 55, 179
AclWI GGATC 4 cut(s) 479, 542, 568, 1126
AcoI YGGCCR 1 cut(s) 1126
AcsI RAATTY 1 cut(s) 809
AfaI GTAC 7 cut(s) 218, 268, 339, 734, 911, 965, 1140
AfiI CCNNNNNNNGG 3 cut(s) 557, 803, 848
AflII CTTAAG 1 cut(s) 923
AgsI TTSAA 5 cut(s) 48, 392, 597, 868, 904
AjnI CCWGG 2 cut(s) 697, 931
AjuI GAANNNNNNNTTGG 4 cut(s) 419, 451, 816, 848
Alw21I GWGCWC 1 cut(s) 1081
Alw26I GTCTC 2 cut(s) 427, 1026
Alw44I GTGCAC 1 cut(s) 1077
AlwI GGATC 4 cut(s) 479, 542, 568, 1126
AoxI GGCC 1 cut(s) 1126
ApaLI GTGCAC 1 cut(s) 1077
ApeKI GCWGC 8 cut(s) 8, 11, 132, 156, 185, 578, 665, 716
ApoI RAATTY 1 cut(s) 809
Asp700I GAANNNNTTC 1 cut(s) 831
Asp718I GGTACC 1 cut(s) 266
AspLEI GCGC 1 cut(s) 1173
AspS9I GGNCC 4 cut(s) 400, 793, 928, 935
AsuHPI GGTGA 1 cut(s) 818
AsuNHI GCTAGC 1 cut(s) 347
AvaII GGWCC 4 cut(s) 400, 793, 928, 935
BaeGI GKGCMC 1 cut(s) 1081
BaeI ACNNNNGTAYC 2 cut(s) 955, 988
BalI TGGCCA 1 cut(s) 1128
BanI GGYRCC 1 cut(s) 266
BbsI GAAGAC 1 cut(s) 85
Bbv12I GWGCWC 1 cut(s) 1081
BbvCI CCTCAGC 1 cut(s) 1058
BbvI GCAGC 8 cut(s) 20, 23, 144, 168, 197, 565, 652, 703
BccI CCATC 3 cut(s) 31, 551, 1118
BcgI CGANNNNNNTGC 4 cut(s) 226, 260, 694, 728
BciT130I CCWGG 2 cut(s) 699, 933
BciVI GTATCC 1 cut(s) 1035
BcoDI GTCTC 2 cut(s) 427, 1026
BfaI CTAG 3 cut(s) 348, 632, 1142
BfmI CTRYAG 1 cut(s) 579
BfrI CTTAAG 1 cut(s) 923
BfuI GTATCC 1 cut(s) 1035
BglII AGATCT 1 cut(s) 855
BisI GCNGC 8 cut(s) 9, 12, 133, 157, 186, 579, 666, 717
BlsI GCNGC 8 cut(s) 10, 13, 134, 158, 187, 580, 667, 718
BmcAI AGTACT 1 cut(s) 1140
Bme1390I CCNGG 2 cut(s) 699, 933
Bme18I GGWCC 4 cut(s) 400, 793, 928, 935
BmgT120I GGNCC 4 cut(s) 400, 793, 928, 935
BmiI GGNNCC 4 cut(s) 100, 268, 795, 930
BmrFI CCNGG 2 cut(s) 699, 933
BmsI GCATC 2 cut(s) 265, 565
BmtI GCTAGC 1 cut(s) 351
BoxI GACNNNNGTC 1 cut(s) 933
BpiI GAAGAC 1 cut(s) 85
BplI GAGNNNNNCTC 2 cut(s) 422, 454
BpmI CTGGAG 1 cut(s) 269
Bpu10I CCTNAGC 1 cut(s) 1058
BpuEI CTTGAG 2 cut(s) 469, 721
BsaBI GATNNNNATC 1 cut(s) 651
BsaI GGTCTC 1 cut(s) 1026
BsaJI CCNNGG 1 cut(s) 931
BsaWI WCCGGW 1 cut(s) 1035
Bsc4I CCNNNNNNNGG 3 cut(s) 557, 803, 848
Bse118I RCCGGY 1 cut(s) 499
Bse1I ACTGG 2 cut(s) 370, 595
Bse8I GATNNNNATC 1 cut(s) 651
BseBI CCWGG 2 cut(s) 699, 933
BseDI CCNNGG 1 cut(s) 931
BseGI GGATG 4 cut(s) 29, 499, 563, 898
BseJI GATNNNNATC 1 cut(s) 651
BseLI CCNNNNNNNGG 3 cut(s) 557, 803, 848
BseMII CTCAG 4 cut(s) 80, 474, 1049, 1149
BseNI ACTGG 2 cut(s) 370, 595
BseRI GAGGAG 1 cut(s) 66
BseSI GKGCMC 1 cut(s) 1081
BseXI GCAGC 8 cut(s) 20, 23, 144, 168, 197, 565, 652, 703
BseYI CCCAGC 1 cut(s) 1106
BsgI GTGCAG 1 cut(s) 651
Bsh1236I CGCG 1 cut(s) 1173
BshFI GGCC 1 cut(s) 1128
BshNI GGYRCC 1 cut(s) 266
BsiHKAI GWGCWC 1 cut(s) 1081
BsiSI CCGG 2 cut(s) 500, 1036
BslFI GGGAC 1 cut(s) 998
BslI CCNNNNNNNGG 3 cut(s) 557, 803, 848
BsmAI GTCTC 2 cut(s) 427, 1026
BsmBI CGTCTC 1 cut(s) 427
BsmFI GGGAC 1 cut(s) 998
BsmI GAATGC 1 cut(s) 632
BsnI GGCC 1 cut(s) 1128
Bso31I GGTCTC 1 cut(s) 1026
Bsp1286I GDGCHC 1 cut(s) 1081
Bsp143I GATC 6 cut(s) 452, 471, 547, 560, 855, 1118
BspACI CCGC 2 cut(s) 55, 179
BspANI GGCC 1 cut(s) 1128
BspCNI CTCAG 4 cut(s) 79, 475, 1050, 1150
BspFNI CGCG 1 cut(s) 1173
BspLI GGNNCC 4 cut(s) 100, 268, 795, 930
BspMAI CTGCAG 1 cut(s) 583
BspOI GCTAGC 1 cut(s) 351
BspPI GGATC 4 cut(s) 479, 542, 568, 1126
BspQI GCTCTTC 1 cut(s) 1034
BspT107I GGYRCC 1 cut(s) 266
BspTI CTTAAG 1 cut(s) 923
BspTNI GGTCTC 1 cut(s) 1026
BsrBI CCGCTC 1 cut(s) 57
BsrFI RCCGGY 1 cut(s) 499
BsrI ACTGG 2 cut(s) 370, 595
BssAI RCCGGY 1 cut(s) 499
BssECI CCNNGG 1 cut(s) 931
BssMI GATC 6 cut(s) 452, 471, 547, 560, 855, 1118
Bst2UI CCWGG 2 cut(s) 699, 933
Bst4CI ACNGT 4 cut(s) 662, 728, 763, 1068
Bst6I CTCTTC 3 cut(s) 483, 507, 1034
BstAFI CTTAAG 1 cut(s) 923
BstAPI GCANNNNNTGC 1 cut(s) 113
BstC8I GCNNGC 4 cut(s) 109, 349, 721, 947
BstDEI CTNAG 4 cut(s) 66, 483, 1058, 1158
BstF5I GGATG 4 cut(s) 29, 499, 563, 898
BstFNI CGCG 1 cut(s) 1173
BstHHI GCGC 1 cut(s) 1173
BstKTI GATC 6 cut(s) 455, 474, 550, 563, 858, 1121
BstMAI GTCTC 2 cut(s) 427, 1026
BstMBI GATC 6 cut(s) 452, 471, 547, 560, 855, 1118
BstMWI GCNNNNNNNGC 3 cut(s) 96, 113, 185
BstNI CCWGG 2 cut(s) 699, 933
BstPAI GACNNNNGTC 1 cut(s) 933
BstSCI CCNGG 2 cut(s) 697, 931
BstSFI CTRYAG 1 cut(s) 579
BstSLI GKGCMC 1 cut(s) 1081
BstUI CGCG 1 cut(s) 1173
BstV1I GCAGC 8 cut(s) 20, 23, 144, 168, 197, 565, 652, 703
BstV2I GAAGAC 1 cut(s) 85
BstX2I RGATCY 2 cut(s) 855, 1118
BstYI RGATCY 2 cut(s) 855, 1118
BsuI GTATCC 1 cut(s) 1035
BsuRI GGCC 1 cut(s) 1128
BtsCI GGATG 4 cut(s) 29, 499, 563, 898
BtsI GCAGTG 1 cut(s) 111
BtsIMutI CAGTG 2 cut(s) 111, 667
Cac8I GCNNGC 4 cut(s) 109, 349, 721, 947
CfoI GCGC 1 cut(s) 1173
Cfr10I RCCGGY 1 cut(s) 499
Cfr13I GGNCC 4 cut(s) 400, 793, 928, 935
CseI GACGC 1 cut(s) 79
Csp6I GTAC 7 cut(s) 217, 267, 338, 733, 910, 964, 1139
CviAII CATG 2 cut(s) 175, 799
CviQI GTAC 7 cut(s) 217, 267, 338, 733, 910, 964, 1139
DdeI CTNAG 4 cut(s) 66, 483, 1058, 1158
DpnI GATC 6 cut(s) 454, 473, 549, 562, 857, 1120
DpnII GATC 6 cut(s) 452, 471, 547, 560, 855, 1118
EaeI YGGCCR 1 cut(s) 1126
Eam1104I CTCTTC 3 cut(s) 483, 507, 1034
EarI CTCTTC 3 cut(s) 483, 507, 1034
Eco31I GGTCTC 1 cut(s) 1026
Eco47I GGWCC 4 cut(s) 400, 793, 928, 935
EcoO109I RGGNCCY 1 cut(s) 928
EcoRI GAATTC 1 cut(s) 809
EcoRII CCWGG 2 cut(s) 697, 931
EcoT22I ATGCAT 2 cut(s) 176, 784
Esp3I CGTCTC 1 cut(s) 427
FaeI CATG 2 cut(s) 178, 802
FaqI GGGAC 1 cut(s) 998
FatI CATG 2 cut(s) 174, 798
FauI CCCGC 1 cut(s) 62
Fnu4HI GCNGC 8 cut(s) 9, 12, 133, 157, 186, 579, 666, 717
FokI GGATG 4 cut(s) 16, 506, 550, 905
Fsp4HI GCNGC 8 cut(s) 9, 12, 133, 157, 186, 579, 666, 717
FspBI CTAG 3 cut(s) 348, 632, 1142
GlaI GCGC 1 cut(s) 1172
GluI GCNGC 8 cut(s) 9, 12, 133, 157, 186, 579, 666, 717
GsaI CCCAGC 1 cut(s) 1110
GsuI CTGGAG 1 cut(s) 269
HaeIII GGCC 1 cut(s) 1128
HapII CCGG 2 cut(s) 500, 1036
HgaI GACGC 1 cut(s) 79
HhaI GCGC 1 cut(s) 1173
Hin1II CATG 2 cut(s) 178, 802
Hin6I GCGC 1 cut(s) 1171
HinP1I GCGC 1 cut(s) 1171
HincII GTYRAC 1 cut(s) 385
HindII GTYRAC 1 cut(s) 385
HinfI GANTC 1 cut(s) 1162
HpaII CCGG 2 cut(s) 500, 1036
HphI GGTGA 1 cut(s) 818
Hpy166II GTNNAC 3 cut(s) 385, 461, 1079
Hpy188I TCNGA 5 cut(s) 484, 605, 837, 939, 1123
Hpy188III TCNNGA 4 cut(s) 525, 554, 656, 1134
Hpy8I GTNNAC 3 cut(s) 385, 461, 1079
HpyAV CCTTC 1 cut(s) 256
HpyCH4III ACNGT 4 cut(s) 662, 728, 763, 1068
HpyCH4V TGCA 9 cut(s) 8, 82, 174, 278, 581, 668, 782, 959, 1079
HpyF10VI GCNNNNNNNGC 3 cut(s) 96, 113, 185
HpyF3I CTNAG 4 cut(s) 66, 483, 1058, 1158
Hsp92II CATG 2 cut(s) 178, 802
HspAI GCGC 1 cut(s) 1171
KpnI GGTACC 1 cut(s) 270
Kzo9I GATC 6 cut(s) 452, 471, 547, 560, 855, 1118
LguI GCTCTTC 1 cut(s) 1034
LmnI GCTCC 4 cut(s) 56, 62, 104, 250
Lsp1109I GCAGC 8 cut(s) 20, 23, 144, 168, 197, 565, 652, 703
LweI GCATC 2 cut(s) 265, 565
MaeI CTAG 3 cut(s) 348, 632, 1142
MaeIII GTNAC 1 cut(s) 16
MalI GATC 6 cut(s) 454, 473, 549, 562, 857, 1120
MbiI CCGCTC 1 cut(s) 57
MboI GATC 6 cut(s) 452, 471, 547, 560, 855, 1118
MflI RGATCY 2 cut(s) 855, 1118
MhlI GDGCHC 1 cut(s) 1081
MlsI TGGCCA 1 cut(s) 1128
MluCI AATT 1 cut(s) 809
MluNI TGGCCA 1 cut(s) 1128
MmeI TCCRAC 4 cut(s) 142, 465, 591, 1194
Mox20I TGGCCA 1 cut(s) 1128
Mph1103I ATGCAT 2 cut(s) 176, 784
MroXI GAANNNNTTC 1 cut(s) 831
MscI TGGCCA 1 cut(s) 1128
MseI TTAA 2 cut(s) 168, 924
MslI CAYNNNNRTG 3 cut(s) 179, 539, 673
Msp20I TGGCCA 1 cut(s) 1128
MspA1I CMGCKG 2 cut(s) 188, 886
MspCI CTTAAG 1 cut(s) 923
MspI CCGG 2 cut(s) 500, 1036
MspR9I CCNGG 2 cut(s) 699, 933
Mva1269I GAATGC 1 cut(s) 632
MvaI CCWGG 2 cut(s) 699, 933
MvnI CGCG 1 cut(s) 1173
MwoI GCNNNNNNNGC 3 cut(s) 96, 113, 185
NdeII GATC 6 cut(s) 452, 471, 547, 560, 855, 1118
NheI GCTAGC 1 cut(s) 347
NlaIII CATG 2 cut(s) 178, 802
NlaIV GGNNCC 4 cut(s) 100, 268, 795, 930
NsiI ATGCAT 2 cut(s) 176, 784
PciSI GCTCTTC 1 cut(s) 1034
PcsI WCGNNNNNNNCGW 1 cut(s) 305
PctI GAATGC 1 cut(s) 632
PdmI GAANNNNTTC 1 cut(s) 831
PfeI GAWTC 1 cut(s) 1162
PkrI GCNGC 8 cut(s) 10, 13, 134, 158, 187, 580, 667, 718
PpuMI RGGWCCY 1 cut(s) 928
PshAI GACNNNNGTC 1 cut(s) 933
Psp5II RGGWCCY 1 cut(s) 928
Psp6I CCWGG 2 cut(s) 697, 931
PspFI CCCAGC 1 cut(s) 1106
PspGI CCWGG 2 cut(s) 697, 931
PspN4I GGNNCC 4 cut(s) 100, 268, 795, 930
PspPI GGNCC 4 cut(s) 400, 793, 928, 935
PspPPI RGGWCCY 1 cut(s) 928
PstI CTGCAG 1 cut(s) 583
PsuI RGATCY 2 cut(s) 855, 1118
PvuII CAGCTG 2 cut(s) 188, 886
RsaI GTAC 7 cut(s) 218, 268, 339, 734, 911, 965, 1140
RsaNI GTAC 7 cut(s) 217, 267, 338, 733, 910, 964, 1139
RseI CAYNNNNRTG 3 cut(s) 179, 539, 673
SapI GCTCTTC 1 cut(s) 1034
SaqAI TTAA 2 cut(s) 168, 924
SatI GCNGC 8 cut(s) 9, 12, 133, 157, 186, 579, 666, 717
Sau3AI GATC 6 cut(s) 452, 471, 547, 560, 855, 1118
Sau96I GGNCC 4 cut(s) 400, 793, 928, 935
ScaI AGTACT 1 cut(s) 1140
ScrFI CCNGG 2 cut(s) 699, 933
SduI GDGCHC 1 cut(s) 1081
SfaNI GCATC 2 cut(s) 265, 565
SfcI CTRYAG 1 cut(s) 579
SinI GGWCC 4 cut(s) 400, 793, 928, 935
SmiMI CAYNNNNRTG 3 cut(s) 179, 539, 673
SmlI CTYRAG 3 cut(s) 448, 736, 923
SmoI CTYRAG 3 cut(s) 448, 736, 923
Sse9I AATT 1 cut(s) 809
SsiI CCGC 2 cut(s) 55, 179
SspMI CTAG 3 cut(s) 348, 632, 1142
StyD4I CCNGG 2 cut(s) 697, 931
TaaI ACNGT 4 cut(s) 662, 728, 763, 1068
TaqI TCGA 4 cut(s) 299, 414, 455, 587
TasI AATT 1 cut(s) 809
TatI WGTACW 3 cut(s) 732, 909, 1138
TfiI GAWTC 1 cut(s) 1162
Tru1I TTAA 2 cut(s) 168, 924
Tru9I TTAA 2 cut(s) 168, 924
TscAI CASTG 2 cut(s) 118, 667
TseI GCWGC 8 cut(s) 8, 11, 132, 156, 185, 578, 665, 716
TspDTI ATGAA 5 cut(s) 18, 663, 980, 1081, 1154
TspGWI ACGGA 1 cut(s) 1023
TspRI CASTG 2 cut(s) 118, 667
Vha464I CTTAAG 1 cut(s) 923
VneI GTGCAC 1 cut(s) 1077
VpaK11BI GGWCC 4 cut(s) 400, 793, 928, 935
XapI RAATTY 1 cut(s) 809
XmnI GAANNNNTTC 1 cut(s) 831
XspI CTAG 3 cut(s) 348, 632, 1142
ZrmI AGTACT 1 cut(s) 1140
Zsp2I ATGCAT 2 cut(s) 176, 784
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.