pycom12g14970

Belongs to the FBPase class 1 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
17424568 .. 17426525
1958 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g14970.4

Sequence Viewer

Length: 1170 bp
ATGGAGTTGATTAACGACCTAAACCAAACCCAAATTGCATTCCCACTTGTTATTTGTTATCTCCCTCCCCCTGTTGGCCTCCTCCAGGAAACCATGATCGCAATACCAAACATTACAAAAAAATTGTTGCTAACCTCACAAATCCCACACACACAATCCAACAAAAAAAAAAACAAAAAAGCCAGAAAATCAGACACTGAAAAGAAAAATCAGAGCAAAAATCAGAAACACCAAATCATGGTTGCAGCAACGTTAACTTCACCGTCGTCCCAACTCCTATGCTCAAGCTCCCGGTCTCTCTGTAACATCTCTCCTCTCCAACAATGTGTGTTGGGCTCCAAAACAGTCGTCTCGTGCCCTAACTTAACTTACAACAAGAGAAGGCATGCGGCTGACGGGGTTAGGTGCATGGCCGTGGCGGCGGAGACAACGGAGCCGAAGAAAAAGAGCGGGTACGAGATTCAGACGCTGACGAGCTGGCTGCTGATGCAAGAGCAGGCCGGGGTGATCGATGCCGAGCTGACCATCGTGCTCTCTAGCATTTCGGTTGCGTGCAAGCAGATTGCTTCTTTGGTGCAGAGGGCTAGCATTTCCAACTTGACCGGGATTCAAGGTGCGGTTAATATCCAAGGAGAGGACCAGAAGAAACTTGATGTTGTCTCCAATGAGGTTTTCTCAAATTGCCTGAGATCAAGCGGAAGGACAGGGATTATAGCATCGGAGGAAGAGGATGTGCCAGTCGCGGTGGAAGAGAGTTATTCCGGCAACTACATTGTGGTGTTTGACCCACTTGATGGATCATCCAACATTGATGCTGCTGTCTCCACTGGATCCATCTTCGGAATATACAGCCCGAATGATGAATGCTTTGCACACATTGAAGATGACTCAACCCTTGATAGTGTGGAACAGAAATGTGTAGTGAGCGTGTGCCAACCAGGAAGCAACCTACTTGCTGCTGGCTACTGCATGTATTCAAGCTCAGTGATCTTTGTGCTCACAATTGGGACTGGTGTTTTTGCATTTTCGTTGGACCCCATGTACGGAGAATTCGTCTTGACTCAAGAAAACATTCAGATTCCGAAAGCCGGAAAAATTTACTCATTCAATGAAGGGAACTATCAGCTGTGGGATGACAAGTTGAAGAAGTACATTGATGATCAAGGGTAA

Protein Analysis

390

Amino Acids

42.37

Weight (kDa)

5.41

Isoelectric Point (pI)

53.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011238)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 238, 794
AccBSI CCGCTC 1 cut(s) 450
AccII CGCG 1 cut(s) 743
AciI CCGC 7 cut(s) 389, 419, 422, 450, 617, 696, 743
AclI AACGTT 1 cut(s) 251
AclWI GGATC 3 cut(s) 805, 825, 838
AcoI YGGCCR 1 cut(s) 411
AcsI RAATTY 2 cut(s) 1049, 1095
AfaI GTAC 3 cut(s) 455, 1043, 1151
AfiI CCNNNNNNNGG 7 cut(s) 74, 85, 238, 634, 794, 1043, 1088
AgsI TTSAA 5 cut(s) 611, 881, 978, 1108, 1144
AjnI CCWGG 2 cut(s) 84, 937
AjuI GAANNNNNNNTTGG 2 cut(s) 656, 688
AluBI AGCT 5 cut(s) 288, 477, 520, 981, 1126
AluI AGCT 5 cut(s) 288, 477, 520, 981, 1126
Alw21I GWGCWC 2 cut(s) 534, 999
Alw26I GTCTC 5 cut(s) 300, 355, 419, 664, 826
AlwI GGATC 3 cut(s) 805, 825, 838
AlwNI CAGNNNCTG 2 cut(s) 197, 469
AoxI GGCC 3 cut(s) 76, 411, 498
ApeKI GCWGC 4 cut(s) 245, 481, 815, 956
ApoI RAATTY 2 cut(s) 1049, 1095
ArsI GACNNNNNNTTYG 2 cut(s) 333, 365
Asp700I GAANNNNTTC 1 cut(s) 1071
AspS9I GGNCC 2 cut(s) 637, 1033
AsuC2I CCSGG 3 cut(s) 292, 502, 604
AsuHPI GGTGA 2 cut(s) 252, 517
AsuNHI GCTAGC 1 cut(s) 584
AvaII GGWCC 2 cut(s) 637, 1033
BaeGI GKGCMC 1 cut(s) 359
BamHI GGATCC 1 cut(s) 830
BanII GRGCYC 1 cut(s) 338
BauI CACGAG 1 cut(s) 352
Bbv12I GWGCWC 2 cut(s) 534, 999
BbvI GCAGC 4 cut(s) 257, 468, 802, 943
BccI CCATC 3 cut(s) 533, 788, 842
BceAI ACGGC 1 cut(s) 398
BcgI CGANNNNNNTGC 2 cut(s) 463, 497
BciT130I CCWGG 2 cut(s) 86, 939
BclI TGATCA 1 cut(s) 1159
BcnI CCSGG 3 cut(s) 292, 502, 604
BcoDI GTCTC 5 cut(s) 300, 355, 419, 664, 826
BfaI CTAG 2 cut(s) 537, 585
BglI GCCNNNNNGGC 1 cut(s) 419
BisI GCNGC 6 cut(s) 246, 390, 420, 482, 816, 957
BlsI GCNGC 6 cut(s) 247, 391, 421, 483, 817, 958
Bme1390I CCNGG 5 cut(s) 86, 292, 502, 604, 939
Bme18I GGWCC 2 cut(s) 637, 1033
BmgT120I GGNCC 2 cut(s) 637, 1033
BmiI GGNNCC 4 cut(s) 337, 435, 832, 1035
BmrFI CCNGG 5 cut(s) 86, 292, 502, 604, 939
BmsI GCATC 4 cut(s) 477, 502, 725, 802
BmtI GCTAGC 1 cut(s) 588
BplI GAGNNNNNCTC 2 cut(s) 659, 691
BpmI CTGGAG 1 cut(s) 68
BpuEI CTTGAG 2 cut(s) 268, 1047
BpuMI CCSGG 3 cut(s) 292, 502, 604
Bsa29I ATCGAT 1 cut(s) 510
BsaI GGTCTC 1 cut(s) 300
BsaJI CCNNGG 3 cut(s) 414, 501, 628
BsaXI ACNNNNNCTCC 2 cut(s) 1038, 1068
Bsc4I CCNNNNNNNGG 7 cut(s) 74, 85, 238, 634, 794, 1043, 1088
Bse1I ACTGG 3 cut(s) 737, 832, 1015
BseBI CCWGG 2 cut(s) 86, 939
BseCI ATCGAT 1 cut(s) 510
BseDI CCNNGG 3 cut(s) 414, 501, 628
BseGI GGATG 3 cut(s) 736, 800, 1138
BseLI CCNNNNNNNGG 7 cut(s) 74, 85, 238, 634, 794, 1043, 1088
BseMII CTCAG 2 cut(s) 677, 996
BseNI ACTGG 3 cut(s) 737, 832, 1015
BseRI GAGGAG 2 cut(s) 71, 303
BseSI GKGCMC 1 cut(s) 359
BseXI GCAGC 4 cut(s) 257, 468, 802, 943
BsgI GTGCAG 1 cut(s) 596
Bsh1236I CGCG 1 cut(s) 743
BshFI GGCC 3 cut(s) 78, 413, 500
BshVI ATCGAT 1 cut(s) 510
BsiHKAI GWGCWC 2 cut(s) 534, 999
BsiSI CCGG 5 cut(s) 292, 501, 603, 762, 1089
BslFI GGGAC 2 cut(s) 253, 1021
BslI CCNNNNNNNGG 7 cut(s) 74, 85, 238, 634, 794, 1043, 1088
BsmAI GTCTC 5 cut(s) 300, 355, 419, 664, 826
BsmBI CGTCTC 1 cut(s) 355
BsmFI GGGAC 2 cut(s) 253, 1021
BsmI GAATGC 2 cut(s) 38, 869
BsnI GGCC 3 cut(s) 78, 413, 500
Bso31I GGTCTC 1 cut(s) 300
Bsp1286I GDGCHC 4 cut(s) 338, 359, 534, 999
Bsp143I GATC 7 cut(s) 96, 507, 689, 797, 830, 987, 1159
BspACI CCGC 7 cut(s) 389, 419, 422, 450, 617, 696, 743
BspANI GGCC 3 cut(s) 78, 413, 500
BspCNI CTCAG 2 cut(s) 678, 995
BspDI ATCGAT 1 cut(s) 510
BspFNI CGCG 1 cut(s) 743
BspLI GGNNCC 4 cut(s) 337, 435, 832, 1035
BspOI GCTAGC 1 cut(s) 588
BspPI GGATC 3 cut(s) 805, 825, 838
BspTNI GGTCTC 1 cut(s) 300
BsrBI CCGCTC 1 cut(s) 450
BsrI ACTGG 3 cut(s) 737, 832, 1015
BssECI CCNNGG 3 cut(s) 414, 501, 628
BssMI GATC 7 cut(s) 96, 507, 689, 797, 830, 987, 1159
BssSI CACGAG 1 cut(s) 352
BssT1I CCWWGG 1 cut(s) 628
Bst2BI CACGAG 1 cut(s) 352
Bst2UI CCWGG 2 cut(s) 86, 939
Bst4CI ACNGT 2 cut(s) 264, 346
Bst6I CTCTTC 2 cut(s) 720, 744
BstC8I GCNNGC 7 cut(s) 387, 479, 498, 553, 557, 586, 961
BstDEI CTNAG 2 cut(s) 686, 982
BstDSI CCRYGG 1 cut(s) 414
BstENI CCTNNNNNAGG 1 cut(s) 83
BstF5I GGATG 3 cut(s) 736, 800, 1138
BstFNI CGCG 1 cut(s) 743
BstKTI GATC 7 cut(s) 99, 510, 692, 800, 833, 990, 1162
BstMAI GTCTC 5 cut(s) 300, 355, 419, 664, 826
BstMBI GATC 7 cut(s) 96, 507, 689, 797, 830, 987, 1159
BstMWI GCNNNNNNNGC 2 cut(s) 419, 487
BstNI CCWGG 2 cut(s) 86, 939
BstNSI RCATGY 2 cut(s) 389, 973
BstSCI CCNGG 5 cut(s) 84, 290, 500, 602, 937
BstSLI GKGCMC 1 cut(s) 359
BstUI CGCG 1 cut(s) 743
BstV1I GCAGC 4 cut(s) 257, 468, 802, 943
BstX2I RGATCY 1 cut(s) 830
BstYI RGATCY 1 cut(s) 830
Bsu15I ATCGAT 1 cut(s) 510
BsuRI GGCC 3 cut(s) 78, 413, 500
BsuTUI ATCGAT 1 cut(s) 510
BtgI CCRYGG 1 cut(s) 414
BtsCI GGATG 3 cut(s) 736, 800, 1138
BtsIMutI CAGTG 3 cut(s) 195, 825, 990
Cac8I GCNNGC 7 cut(s) 387, 479, 498, 553, 557, 586, 961
CaiI CAGNNNCTG 2 cut(s) 197, 469
Cfr13I GGNCC 2 cut(s) 637, 1033
ClaI ATCGAT 1 cut(s) 510
CseI GACGC 1 cut(s) 475
Csp6I GTAC 3 cut(s) 454, 1042, 1150
CviAII CATG 6 cut(s) 94, 238, 386, 409, 970, 1039
CviQI GTAC 3 cut(s) 454, 1042, 1150
DdeI CTNAG 2 cut(s) 686, 982
DpnI GATC 7 cut(s) 98, 509, 691, 799, 832, 989, 1161
DpnII GATC 7 cut(s) 96, 507, 689, 797, 830, 987, 1159
EaeI YGGCCR 1 cut(s) 411
Eam1104I CTCTTC 2 cut(s) 720, 744
EarI CTCTTC 2 cut(s) 720, 744
EciI GGCGGA 1 cut(s) 437
Eco130I CCWWGG 1 cut(s) 628
Eco24I GRGCYC 1 cut(s) 338
Eco31I GGTCTC 1 cut(s) 300
Eco47I GGWCC 2 cut(s) 637, 1033
EcoNI CCTNNNNNAGG 1 cut(s) 83
EcoRI GAATTC 1 cut(s) 1049
EcoRII CCWGG 2 cut(s) 84, 937
EcoT14I CCWWGG 1 cut(s) 628
EcoT38I GRGCYC 1 cut(s) 338
ErhI CCWWGG 1 cut(s) 628
Esp3I CGTCTC 1 cut(s) 355
FaeI CATG 6 cut(s) 97, 241, 389, 412, 973, 1042
FaiI YATR 9 cut(s) 95, 239, 280, 387, 410, 713, 847, 971, 1040
FaqI GGGAC 2 cut(s) 253, 1021
FatI CATG 6 cut(s) 93, 237, 385, 408, 969, 1038
FauI CCCGC 1 cut(s) 443
FbaI TGATCA 1 cut(s) 1159
Fnu4HI GCNGC 6 cut(s) 246, 390, 420, 482, 816, 957
FokI GGATG 3 cut(s) 743, 787, 1145
FriOI GRGCYC 1 cut(s) 338
Fsp4HI GCNGC 6 cut(s) 246, 390, 420, 482, 816, 957
FspBI CTAG 2 cut(s) 537, 585
GluI GCNGC 6 cut(s) 246, 390, 420, 482, 816, 957
GsuI CTGGAG 1 cut(s) 68
HaeIII GGCC 3 cut(s) 78, 413, 500
HapII CCGG 5 cut(s) 292, 501, 603, 762, 1089
HgaI GACGC 1 cut(s) 475
Hin1II CATG 6 cut(s) 97, 241, 389, 412, 973, 1042
HincII GTYRAC 1 cut(s) 255
HindII GTYRAC 1 cut(s) 255
HinfI GANTC 5 cut(s) 460, 607, 887, 1060, 1078
HpaI GTTAAC 1 cut(s) 255
HpaII CCGG 5 cut(s) 292, 501, 603, 762, 1089
HphI GGTGA 2 cut(s) 252, 517
Hpy166II GTNNAC 1 cut(s) 255
Hpy188I TCNGA 8 cut(s) 193, 213, 225, 465, 721, 842, 1077, 1083
Hpy188III TCNNGA 2 cut(s) 1057, 1064
Hpy8I GTNNAC 1 cut(s) 255
Hpy99I CGWCG 1 cut(s) 268
HpyAV CCTTC 3 cut(s) 375, 693, 1106
HpyCH4III ACNGT 2 cut(s) 264, 346
HpyCH4IV ACGT 1 cut(s) 251
HpyCH4V TGCA 9 cut(s) 38, 245, 408, 490, 555, 577, 872, 969, 1022
HpyF10VI GCNNNNNNNGC 2 cut(s) 419, 487
HpyF3I CTNAG 2 cut(s) 686, 982
HpySE526I ACGT 1 cut(s) 251
Hsp92II CATG 6 cut(s) 97, 241, 389, 412, 973, 1042
Ksp22I TGATCA 1 cut(s) 1159
KspAI GTTAAC 1 cut(s) 255
Kzo9I GATC 7 cut(s) 96, 507, 689, 797, 830, 987, 1159
LmnI GCTCC 3 cut(s) 293, 341, 433
Lsp1109I GCAGC 4 cut(s) 257, 468, 802, 943
LweI GCATC 4 cut(s) 477, 502, 725, 802
MaeI CTAG 2 cut(s) 537, 585
MaeII ACGT 1 cut(s) 251
MaeIII GTNAC 1 cut(s) 302
MalI GATC 7 cut(s) 98, 509, 691, 799, 832, 989, 1161
MbiI CCGCTC 1 cut(s) 450
MboI GATC 7 cut(s) 96, 507, 689, 797, 830, 987, 1159
MboII GAAGA 7 cut(s) 451, 655, 737, 761, 829, 893, 1156
MfeI CAATTG 1 cut(s) 1002
MflI RGATCY 1 cut(s) 830
MhlI GDGCHC 4 cut(s) 338, 359, 534, 999
MluCI AATT 6 cut(s) 33, 122, 679, 1002, 1049, 1095
MlyI GAGTC 2 cut(s) 881, 1054
MmeI TCCRAC 5 cut(s) 183, 343, 618, 828, 1011
MroXI GAANNNNTTC 1 cut(s) 1071
MseI TTAA 4 cut(s) 12, 254, 365, 621
MslI CAYNNNNRTG 2 cut(s) 413, 776
MspA1I CMGCKG 1 cut(s) 1126
MspI CCGG 5 cut(s) 292, 501, 603, 762, 1089
MspR9I CCNGG 5 cut(s) 86, 292, 502, 604, 939
MunI CAATTG 1 cut(s) 1002
Mva1269I GAATGC 2 cut(s) 38, 869
MvaI CCWGG 2 cut(s) 86, 939
MvnI CGCG 1 cut(s) 743
MwoI GCNNNNNNNGC 2 cut(s) 419, 487
NciI CCSGG 3 cut(s) 292, 502, 604
NdeII GATC 7 cut(s) 96, 507, 689, 797, 830, 987, 1159
NheI GCTAGC 1 cut(s) 584
NlaIII CATG 6 cut(s) 97, 241, 389, 412, 973, 1042
NlaIV GGNNCC 4 cut(s) 337, 435, 832, 1035
NmeAIII GCCGAG 1 cut(s) 541
NspI RCATGY 2 cut(s) 389, 973
PaeI GCATGC 1 cut(s) 389
PcsI WCGNNNNNNNCGW 1 cut(s) 1050
PctI GAATGC 2 cut(s) 38, 869
PdmI GAANNNNTTC 1 cut(s) 1071
PfeI GAWTC 3 cut(s) 460, 607, 1078
PflMI CCANNNNNTGG 2 cut(s) 238, 794
PfoI TCCNGGA 1 cut(s) 84
PkrI GCNGC 6 cut(s) 247, 391, 421, 483, 817, 958
PleI GAGTC 2 cut(s) 881, 1054
PpsI GAGTC 2 cut(s) 881, 1054
Psp1406I AACGTT 1 cut(s) 251
Psp6I CCWGG 2 cut(s) 84, 937
PspGI CCWGG 2 cut(s) 84, 937
PspN4I GGNNCC 4 cut(s) 337, 435, 832, 1035
PspPI GGNCC 2 cut(s) 637, 1033
PstNI CAGNNNCTG 2 cut(s) 197, 469
PsuI RGATCY 1 cut(s) 830
PvuII CAGCTG 1 cut(s) 1126
RsaI GTAC 3 cut(s) 455, 1043, 1151
RsaNI GTAC 3 cut(s) 454, 1042, 1150
RseI CAYNNNNRTG 2 cut(s) 413, 776
SaqAI TTAA 4 cut(s) 12, 254, 365, 621
SatI GCNGC 6 cut(s) 246, 390, 420, 482, 816, 957
Sau3AI GATC 7 cut(s) 96, 507, 689, 797, 830, 987, 1159
Sau96I GGNCC 2 cut(s) 637, 1033
SchI GAGTC 2 cut(s) 881, 1054
ScrFI CCNGG 5 cut(s) 86, 292, 502, 604, 939
SduI GDGCHC 4 cut(s) 338, 359, 534, 999
SfaNI GCATC 4 cut(s) 477, 502, 725, 802
SinI GGWCC 2 cut(s) 637, 1033
SmiMI CAYNNNNRTG 2 cut(s) 413, 776
SmlI CTYRAG 2 cut(s) 283, 1062
SmoI CTYRAG 2 cut(s) 283, 1062
SphI GCATGC 1 cut(s) 389
Sse9I AATT 6 cut(s) 33, 122, 679, 1002, 1049, 1095
SsiI CCGC 7 cut(s) 389, 419, 422, 450, 617, 696, 743
SspMI CTAG 2 cut(s) 537, 585
StyD4I CCNGG 5 cut(s) 84, 290, 500, 602, 937
StyI CCWWGG 1 cut(s) 628
TaaI ACNGT 2 cut(s) 264, 346
TaiI ACGT 1 cut(s) 254
TaqI TCGA 1 cut(s) 510
TasI AATT 6 cut(s) 33, 122, 679, 1002, 1049, 1095
TatI WGTACW 1 cut(s) 1149
TauI GCSGC 2 cut(s) 392, 422
TfiI GAWTC 3 cut(s) 460, 607, 1078
Tru1I TTAA 4 cut(s) 12, 254, 365, 621
Tru9I TTAA 4 cut(s) 12, 254, 365, 621
TscAI CASTG 3 cut(s) 202, 832, 990
TseI GCWGC 4 cut(s) 245, 481, 815, 956
TspDTI ATGAA 2 cut(s) 876, 1125
TspGWI ACGGA 2 cut(s) 446, 1059
TspRI CASTG 3 cut(s) 202, 832, 990
Van91I CCANNNNNTGG 2 cut(s) 238, 794
VpaK11BI GGWCC 2 cut(s) 637, 1033
XagI CCTNNNNNAGG 1 cut(s) 83
XapI RAATTY 2 cut(s) 1049, 1095
XceI RCATGY 2 cut(s) 389, 973
XmnI GAANNNNTTC 1 cut(s) 1071
XspI CTAG 2 cut(s) 537, 585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.