RLG00000024716

Belongs to the FBPase class 1 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
38516104 .. 38518135
2032 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024716

Sequence Viewer

Length: 1236 bp
ATGGTTGCAGCAGCAGTAACTCCATCTTCATCCCAACTCTTATGCTCGAGCTCTCGCTCCATTTCTCAGCTCTCTGCTCTGCAACAATGCGTCTTCGGCTCCAAAGCAACCAATGCCACAACCCCAAACAGCAGCAAGAGAAATAGGGGTGTGGGCAGCGTTGGAGTTAAATGCATGGCGGTGGCAGCTGAAACTGAGCCGAAGAAGAAGAAAAGCGGGTACCAGATTACAACCCTGACGGGCTGGTTGCTGGAGCAAGAACAGAAGGGTGTCATCGATGCAGAGATGACCATTGTGCTTTCGAGCATTTCGTTGGCCTGCAAGCAGATTGCTTCTTTGGTGCAGAGAGCTAGCATTTCTAACTTGACTGGTATTCAGGGTGCTGTGAACATTCAAGGAGAGGACCAGAAGAAACTCGACGTCGTCTCCAATGAGGTTTTCTCCAACTGCTTGAGATCGAGTGGACGAACAGGGATTATAGCCTCTGAGGAAGAGGATGTGCCAGTGGCTGTGGAAGAGAGTTATTCCGGCAACTACATTGTGGTGTTTGACCCTCTTGATGGATCATCCAACATTGATGCTGCAGTTTCCACTGGTTCAATCTTCGGAATATACAGCCCAAATGACGAGTGCCTAGCAGACATTGATGATGGAAATCTTGACAGTGCTGCACAGAAATGTATAGTGAATGTGTGTCAGCCAGGAAGCAACCTACTTGCTGCTGGCTATTGCATGTACTCAAGCTCTGTAATCTTTGTGCTTACAGTTGGGCAAGGTGTATATGCATTTAGCTTGGACCCCATGTATGGTGAATTTGTTTTGACCCAAGAAAAAGTTCAGATACCGAAAGCAGGAAAGATTTACTCGTTCAATGAAGGCAACTATCAACTGTGGGATGACAAGTTGAAGAAGTACATTGATGACCTTAAGGACCCAGGTCCGAGTGGCAAGCCCTACTCTGCAAGGTACATTGGTAGTTTGGTTGGGGACTTTCATAGAACGCTTCTGTACGGTGGCATTTATGGGTACCCAAGAGACAAGAAGAGCAAGAATGGAAAGCTGAGGCTATTGTATGAGTGCGCACCAATGAGTTTCATAGTGGAACAAGCTGGCGGGAAAGGATCTGACGGCCATGCCAGAGTACTAGACATTCAGCCAACTGAGATTCATCAGCGCGTTCCACTTTACATTGGAAGCGTAGACGAGGTGGAGAAGTTGGAGAAGTATTTAGCTTGA

Protein Analysis

412

Amino Acids

44.22

Weight (kDa)

5.35

Isoelectric Point (pI)

36.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBPase PF00316 78 - 277 1.1e-56 Fructose-1-6-bisphosphatase, N-terminal domain
FBPase_C PF18913 281 - 410 9.2e-50 Fructose-1-6-bisphosphatase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011238)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 423
Acc16I TGCGCA 1 cut(s) 1081
Acc65I GGTACC 2 cut(s) 219, 1026
AccB1I GGYRCC 2 cut(s) 219, 1026
AccI GTMKAC 1 cut(s) 1200
AccII CGCG 1 cut(s) 1176
AciI CCGC 3 cut(s) 179, 216, 1113
AclWI GGATC 2 cut(s) 571, 1129
AcoI YGGCCR 1 cut(s) 1129
AcsI RAATTY 1 cut(s) 812
AcyI GRCGYC 1 cut(s) 420
AfaI GTAC 7 cut(s) 221, 737, 914, 968, 1010, 1028, 1143
AfiI CCNNNNNNNGG 3 cut(s) 560, 806, 851
AflII CTTAAG 1 cut(s) 926
AgsI TTSAA 4 cut(s) 395, 600, 871, 907
AjnI CCWGG 2 cut(s) 700, 934
AjuI GAANNNNNNNTTGG 4 cut(s) 422, 454, 819, 851
AluBI AGCT 9 cut(s) 51, 70, 188, 350, 744, 792, 1060, 1109, 1232
AluI AGCT 9 cut(s) 51, 70, 188, 350, 744, 792, 1060, 1109, 1232
Alw21I GWGCWC 1 cut(s) 53
Alw26I GTCTC 2 cut(s) 430, 1029
AlwI GGATC 2 cut(s) 571, 1129
AlwNI CAGNNNCTG 1 cut(s) 509
Ama87I CYCGRG 1 cut(s) 46
AoxI GGCC 2 cut(s) 315, 1129
ApeKI GCWGC 8 cut(s) 8, 11, 132, 156, 185, 581, 668, 719
ApoI RAATTY 1 cut(s) 812
Asp700I GAANNNNTTC 1 cut(s) 834
Asp718I GGTACC 2 cut(s) 219, 1026
AspLEI GCGC 2 cut(s) 1082, 1176
AspS9I GGNCC 4 cut(s) 403, 796, 931, 938
AsuHPI GGTGA 1 cut(s) 821
AsuNHI GCTAGC 1 cut(s) 350
AvaI CYCGRG 1 cut(s) 46
AvaII GGWCC 4 cut(s) 403, 796, 931, 938
BaeI ACNNNNGTAYC 2 cut(s) 958, 991
BanI GGYRCC 2 cut(s) 219, 1026
BanII GRGCYC 1 cut(s) 53
BbsI GAAGAC 1 cut(s) 85
Bbv12I GWGCWC 1 cut(s) 53
BbvCI CCTCAGC 1 cut(s) 1061
BbvI GCAGC 8 cut(s) 20, 23, 144, 168, 197, 568, 655, 706
BccI CCATC 3 cut(s) 31, 554, 644
BceAI ACGGC 1 cut(s) 1144
BciT130I CCWGG 2 cut(s) 702, 936
BcoDI GTCTC 2 cut(s) 430, 1029
BfaI CTAG 3 cut(s) 351, 635, 1145
BfmI CTRYAG 1 cut(s) 582
BfrI CTTAAG 1 cut(s) 926
BisI GCNGC 8 cut(s) 9, 12, 133, 157, 186, 582, 669, 720
BlsI GCNGC 8 cut(s) 10, 13, 134, 158, 187, 583, 670, 721
BmcAI AGTACT 1 cut(s) 1143
Bme1390I CCNGG 2 cut(s) 702, 936
Bme18I GGWCC 4 cut(s) 403, 796, 931, 938
BmeT110I CYCGRG 1 cut(s) 46
BmgT120I GGNCC 4 cut(s) 403, 796, 931, 938
BmiI GGNNCC 5 cut(s) 100, 221, 798, 933, 1028
BmrFI CCNGG 2 cut(s) 702, 936
BmsI GCATC 2 cut(s) 268, 568
BmtI GCTAGC 1 cut(s) 354
BoxI GACNNNNGTC 1 cut(s) 936
BpiI GAAGAC 1 cut(s) 85
BplI GAGNNNNNCTC 2 cut(s) 425, 457
BpmI CTGGAG 1 cut(s) 272
Bpu10I CCTNAGC 1 cut(s) 1061
BpuEI CTTGAG 2 cut(s) 472, 724
Bsa29I ATCGAT 1 cut(s) 276
BsaBI GATNNNNATC 1 cut(s) 654
BsaHI GRCGYC 1 cut(s) 420
BsaJI CCNNGG 1 cut(s) 934
BsaXI ACNNNNNCTCC 2 cut(s) 410, 440
Bsc4I CCNNNNNNNGG 3 cut(s) 560, 806, 851
Bse1I ACTGG 3 cut(s) 373, 503, 598
Bse8I GATNNNNATC 1 cut(s) 654
BseBI CCWGG 2 cut(s) 702, 936
BseCI ATCGAT 1 cut(s) 276
BseDI CCNNGG 1 cut(s) 934
BseGI GGATG 4 cut(s) 29, 502, 566, 901
BseJI GATNNNNATC 1 cut(s) 654
BseLI CCNNNNNNNGG 3 cut(s) 560, 806, 851
BseMII CTCAG 5 cut(s) 80, 186, 477, 1052, 1152
BseNI ACTGG 3 cut(s) 373, 503, 598
BseXI GCAGC 8 cut(s) 20, 23, 144, 168, 197, 568, 655, 706
BsgI GTGCAG 2 cut(s) 362, 654
Bsh1236I CGCG 1 cut(s) 1176
BshFI GGCC 2 cut(s) 317, 1131
BshNI GGYRCC 2 cut(s) 219, 1026
BshVI ATCGAT 1 cut(s) 276
BsiHKAI GWGCWC 1 cut(s) 53
BsiHKCI CYCGRG 1 cut(s) 46
BsiSI CCGG 1 cut(s) 528
BslFI GGGAC 1 cut(s) 1001
BslI CCNNNNNNNGG 3 cut(s) 560, 806, 851
BsmAI GTCTC 2 cut(s) 430, 1029
BsmBI CGTCTC 1 cut(s) 430
BsmFI GGGAC 1 cut(s) 1001
BsnI GGCC 2 cut(s) 317, 1131
BsoBI CYCGRG 1 cut(s) 46
Bsp1286I GDGCHC 1 cut(s) 53
Bsp143I GATC 3 cut(s) 455, 563, 1121
BspACI CCGC 3 cut(s) 179, 216, 1113
BspANI GGCC 2 cut(s) 317, 1131
BspCNI CTCAG 5 cut(s) 79, 187, 478, 1053, 1153
BspDI ATCGAT 1 cut(s) 276
BspFNI CGCG 1 cut(s) 1176
BspLI GGNNCC 5 cut(s) 100, 221, 798, 933, 1028
BspMAI CTGCAG 1 cut(s) 586
BspOI GCTAGC 1 cut(s) 354
BspPI GGATC 2 cut(s) 571, 1129
BspQI GCTCTTC 1 cut(s) 1037
BspT107I GGYRCC 2 cut(s) 219, 1026
BspTI CTTAAG 1 cut(s) 926
BsrI ACTGG 3 cut(s) 373, 503, 598
BssECI CCNNGG 1 cut(s) 934
BssMI GATC 3 cut(s) 455, 563, 1121
BssNI GRCGYC 1 cut(s) 420
Bst2UI CCWGG 2 cut(s) 702, 936
Bst4CI ACNGT 4 cut(s) 665, 766, 891, 1013
Bst6I CTCTTC 3 cut(s) 486, 510, 1037
BstACI GRCGYC 1 cut(s) 420
BstAFI CTTAAG 1 cut(s) 926
BstAPI GCANNNNNTGC 1 cut(s) 113
BstC8I GCNNGC 6 cut(s) 319, 323, 352, 724, 950, 1111
BstDEI CTNAG 5 cut(s) 66, 195, 486, 1061, 1161
BstF5I GGATG 4 cut(s) 29, 502, 566, 901
BstFNI CGCG 1 cut(s) 1176
BstHHI GCGC 2 cut(s) 1082, 1176
BstKTI GATC 3 cut(s) 458, 566, 1124
BstMAI GTCTC 2 cut(s) 430, 1029
BstMBI GATC 3 cut(s) 455, 563, 1121
BstMWI GCNNNNNNNGC 3 cut(s) 96, 113, 185
BstNI CCWGG 2 cut(s) 702, 936
BstNSI RCATGY 1 cut(s) 736
BstPAI GACNNNNGTC 1 cut(s) 936
BstSCI CCNGG 2 cut(s) 700, 934
BstSFI CTRYAG 1 cut(s) 582
BstUI CGCG 1 cut(s) 1176
BstV1I GCAGC 8 cut(s) 20, 23, 144, 168, 197, 568, 655, 706
BstV2I GAAGAC 1 cut(s) 85
BstX2I RGATCY 1 cut(s) 1121
BstYI RGATCY 1 cut(s) 1121
Bsu15I ATCGAT 1 cut(s) 276
BsuRI GGCC 2 cut(s) 317, 1131
BsuTUI ATCGAT 1 cut(s) 276
BtsCI GGATG 4 cut(s) 29, 502, 566, 901
BtsIMutI CAGTG 3 cut(s) 510, 591, 670
Cac8I GCNNGC 6 cut(s) 319, 323, 352, 724, 950, 1111
CaiI CAGNNNCTG 1 cut(s) 509
CfoI GCGC 2 cut(s) 1082, 1176
Cfr13I GGNCC 4 cut(s) 403, 796, 931, 938
ClaI ATCGAT 1 cut(s) 276
CseI GACGC 1 cut(s) 79
Csp6I GTAC 7 cut(s) 220, 736, 913, 967, 1009, 1027, 1142
CviAII CATG 4 cut(s) 175, 733, 802, 1133
CviQI GTAC 7 cut(s) 220, 736, 913, 967, 1009, 1027, 1142
DdeI CTNAG 5 cut(s) 66, 195, 486, 1061, 1161
DpnI GATC 3 cut(s) 457, 565, 1123
DpnII GATC 3 cut(s) 455, 563, 1121
EaeI YGGCCR 1 cut(s) 1129
Eam1104I CTCTTC 3 cut(s) 486, 510, 1037
EarI CTCTTC 3 cut(s) 486, 510, 1037
Ecl136II GAGCTC 1 cut(s) 51
Eco24I GRGCYC 1 cut(s) 53
Eco47I GGWCC 4 cut(s) 403, 796, 931, 938
Eco53kI GAGCTC 1 cut(s) 51
Eco88I CYCGRG 1 cut(s) 46
EcoICRI GAGCTC 1 cut(s) 51
EcoO109I RGGNCCY 1 cut(s) 931
EcoRII CCWGG 2 cut(s) 700, 934
EcoT22I ATGCAT 2 cut(s) 176, 787
EcoT38I GRGCYC 1 cut(s) 53
Esp3I CGTCTC 1 cut(s) 430
FaeI CATG 4 cut(s) 178, 736, 805, 1136
FaqI GGGAC 1 cut(s) 1001
FatI CATG 4 cut(s) 174, 732, 801, 1132
FauI CCCGC 2 cut(s) 209, 1106
FblI GTMKAC 1 cut(s) 1200
Fnu4HI GCNGC 8 cut(s) 9, 12, 133, 157, 186, 582, 669, 720
FokI GGATG 4 cut(s) 16, 509, 553, 908
FriOI GRGCYC 1 cut(s) 53
Fsp4HI GCNGC 8 cut(s) 9, 12, 133, 157, 186, 582, 669, 720
FspAI RTGCGCAY 1 cut(s) 1081
FspBI CTAG 3 cut(s) 351, 635, 1145
FspI TGCGCA 1 cut(s) 1081
GlaI GCGC 2 cut(s) 1081, 1175
GluI GCNGC 8 cut(s) 9, 12, 133, 157, 186, 582, 669, 720
GsuI CTGGAG 1 cut(s) 272
HaeIII GGCC 2 cut(s) 317, 1131
HapII CCGG 1 cut(s) 528
HgaI GACGC 1 cut(s) 79
HhaI GCGC 2 cut(s) 1082, 1176
Hin1I GRCGYC 1 cut(s) 420
Hin1II CATG 4 cut(s) 178, 736, 805, 1136
Hin6I GCGC 2 cut(s) 1080, 1174
HinP1I GCGC 2 cut(s) 1080, 1174
HinfI GANTC 1 cut(s) 1165
HpaII CCGG 1 cut(s) 528
HphI GGTGA 1 cut(s) 821
Hpy166II GTNNAC 3 cut(s) 388, 464, 1201
Hpy188I TCNGA 5 cut(s) 487, 608, 840, 942, 1126
Hpy188III TCNNGA 2 cut(s) 557, 659
Hpy8I GTNNAC 3 cut(s) 388, 464, 1201
Hpy99I CGWCG 2 cut(s) 422, 425
HpyAV CCTTC 2 cut(s) 259, 869
HpyCH4III ACNGT 4 cut(s) 665, 766, 891, 1013
HpyCH4IV ACGT 1 cut(s) 420
HpyF10VI GCNNNNNNNGC 3 cut(s) 96, 113, 185
HpyF3I CTNAG 5 cut(s) 66, 195, 486, 1061, 1161
HpySE526I ACGT 1 cut(s) 420
Hsp92I GRCGYC 1 cut(s) 420
Hsp92II CATG 4 cut(s) 178, 736, 805, 1136
HspAI GCGC 2 cut(s) 1080, 1174
KpnI GGTACC 2 cut(s) 223, 1030
Kzo9I GATC 3 cut(s) 455, 563, 1121
LguI GCTCTTC 1 cut(s) 1037
LmnI GCTCC 3 cut(s) 62, 104, 253
Lsp1109I GCAGC 8 cut(s) 20, 23, 144, 168, 197, 568, 655, 706
LweI GCATC 2 cut(s) 268, 568
MaeI CTAG 3 cut(s) 351, 635, 1145
MaeII ACGT 1 cut(s) 420
MaeIII GTNAC 1 cut(s) 16
MalI GATC 3 cut(s) 457, 565, 1123
MboI GATC 3 cut(s) 455, 563, 1121
MflI RGATCY 1 cut(s) 1121
MhlI GDGCHC 1 cut(s) 53
MluCI AATT 1 cut(s) 812
MmeI TCCRAC 4 cut(s) 142, 468, 594, 1197
MnlI CCTC 8 cut(s) 394, 427, 481, 487, 493, 564, 1056, 1198
Mph1103I ATGCAT 2 cut(s) 176, 787
MroXI GAANNNNTTC 1 cut(s) 834
MseI TTAA 2 cut(s) 168, 927
MslI CAYNNNNRTG 3 cut(s) 179, 542, 676
MspA1I CMGCKG 1 cut(s) 188
MspCI CTTAAG 1 cut(s) 926
MspI CCGG 1 cut(s) 528
MspR9I CCNGG 2 cut(s) 702, 936
MvaI CCWGG 2 cut(s) 702, 936
MvnI CGCG 1 cut(s) 1176
MwoI GCNNNNNNNGC 3 cut(s) 96, 113, 185
NdeII GATC 3 cut(s) 455, 563, 1121
NheI GCTAGC 1 cut(s) 350
NlaIII CATG 4 cut(s) 178, 736, 805, 1136
NlaIV GGNNCC 5 cut(s) 100, 221, 798, 933, 1028
NsbI TGCGCA 1 cut(s) 1081
NsiI ATGCAT 2 cut(s) 176, 787
NspI RCATGY 1 cut(s) 736
PaeR7I CTCGAG 1 cut(s) 46
PciSI GCTCTTC 1 cut(s) 1037
PcsI WCGNNNNNNNCGW 1 cut(s) 308
PdmI GAANNNNTTC 1 cut(s) 834
PfeI GAWTC 1 cut(s) 1165
PflFI GACNNNGTC 1 cut(s) 422
PkrI GCNGC 8 cut(s) 10, 13, 134, 158, 187, 583, 670, 721
PpuMI RGGWCCY 1 cut(s) 931
PshAI GACNNNNGTC 1 cut(s) 936
Psp124BI GAGCTC 1 cut(s) 53
Psp5II RGGWCCY 1 cut(s) 931
Psp6I CCWGG 2 cut(s) 700, 934
PspGI CCWGG 2 cut(s) 700, 934
PspN4I GGNNCC 5 cut(s) 100, 221, 798, 933, 1028
PspPI GGNCC 4 cut(s) 403, 796, 931, 938
PspPPI RGGWCCY 1 cut(s) 931
PspXI VCTCGAGB 1 cut(s) 46
PstI CTGCAG 1 cut(s) 586
PstNI CAGNNNCTG 1 cut(s) 509
PsuI RGATCY 1 cut(s) 1121
PsyI GACNNNGTC 1 cut(s) 422
PvuII CAGCTG 1 cut(s) 188
RsaI GTAC 7 cut(s) 221, 737, 914, 968, 1010, 1028, 1143
RsaNI GTAC 7 cut(s) 220, 736, 913, 967, 1009, 1027, 1142
RseI CAYNNNNRTG 3 cut(s) 179, 542, 676
SacI GAGCTC 1 cut(s) 53
SapI GCTCTTC 1 cut(s) 1037
SaqAI TTAA 2 cut(s) 168, 927
SatI GCNGC 8 cut(s) 9, 12, 133, 157, 186, 582, 669, 720
Sau3AI GATC 3 cut(s) 455, 563, 1121
Sau96I GGNCC 4 cut(s) 403, 796, 931, 938
ScaI AGTACT 1 cut(s) 1143
ScrFI CCNGG 2 cut(s) 702, 936
SduI GDGCHC 1 cut(s) 53
SfaNI GCATC 2 cut(s) 268, 568
SfcI CTRYAG 1 cut(s) 582
Sfr274I CTCGAG 1 cut(s) 46
SinI GGWCC 4 cut(s) 403, 796, 931, 938
SlaI CTCGAG 1 cut(s) 46
SmiMI CAYNNNNRTG 3 cut(s) 179, 542, 676
SmlI CTYRAG 4 cut(s) 46, 451, 739, 926
SmoI CTYRAG 4 cut(s) 46, 451, 739, 926
Sse9I AATT 1 cut(s) 812
SsiI CCGC 3 cut(s) 179, 216, 1113
SspMI CTAG 3 cut(s) 351, 635, 1145
SstI GAGCTC 1 cut(s) 53
StyD4I CCNGG 2 cut(s) 700, 934
TaaI ACNGT 4 cut(s) 665, 766, 891, 1013
TaiI ACGT 1 cut(s) 423
TaqI TCGA 5 cut(s) 47, 276, 302, 417, 458
TasI AATT 1 cut(s) 812
TatI WGTACW 3 cut(s) 735, 912, 1141
TfiI GAWTC 1 cut(s) 1165
Tru1I TTAA 2 cut(s) 168, 927
Tru9I TTAA 2 cut(s) 168, 927
TscAI CASTG 3 cut(s) 510, 598, 670
TseI GCWGC 8 cut(s) 8, 11, 132, 156, 185, 581, 668, 719
TspDTI ATGAA 5 cut(s) 18, 888, 983, 1084, 1157
TspRI CASTG 3 cut(s) 510, 598, 670
Tth111I GACNNNGTC 1 cut(s) 422
Vha464I CTTAAG 1 cut(s) 926
VpaK11BI GGWCC 4 cut(s) 403, 796, 931, 938
XapI RAATTY 1 cut(s) 812
XceI RCATGY 1 cut(s) 736
XhoI CTCGAG 1 cut(s) 46
XmiI GTMKAC 1 cut(s) 1200
XmnI GAANNNNTTC 1 cut(s) 834
XspI CTAG 3 cut(s) 351, 635, 1145
ZraI GACGTC 1 cut(s) 421
ZrmI AGTACT 1 cut(s) 1143
Zsp2I ATGCAT 2 cut(s) 176, 787
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.