Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0013262

Physical Location & Seq

Genomic Coordinates Forward (+)

9229710 .. 9232319

Gene Structure 2610 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g14880.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGTGGTTTACAAAGCCATTGAGCACTCAAATCTCAGCCCAAACCAACCTCTACATCCAACGCGCCCTTCACACCGACGGCCTCGACCTCGCCGCCTATGGCCGCCTCTTCCAGCATTTCACCGACCGCCGCCTCCCGCGTCAGGCCAAGCAGCTCCACGCCCGCCTCCTCCTCTTCTCCGTCAAACCCGGCAACTTCCTCGCATCAAAGCTCATCAGCTTCTATTGTAGAAACAACCAACTCAAACAAGCACATAAGGTGTTCGATGAAATTCCTCAGAAGAACACTTTCGCTTGGAATGCCTTGCTTATTGGGTACTCCATTCGCAACATGCATACTGATACTCTGAGGCTGTTTTCGGCCATGATGGCGTCGCACTCGCCGGAAGCGAAGCCGGATAATTTCACTATGACTTGTGTGATGAAGGCGCTGGGGGGTTTGTTTTCCGGGACTGATTTGGCTAAGGAGGTGCATTGCTTTGTTCTGAGAAATGGGTTTGATTCGGATTTGTTTGTTGCTAATTGTTTGATGACTTTCTATTCGAGGTGTGATGAGGTTGGAATGGCCAGGGCATTGTTTGATAGGATGCCGGAGAGAGATATCGTGTCGTGGAATTCGATGATTGGTGGGTATTCTCAGGCTGGGTGTTATGGAGAGTGTAAAGAGTTGTATAGGGAGATGTTGGAGTCTGTGAAGGTGAGGCCTGATGATGTGACTGCAGTTAGTGTTTTGCAGGCATGTGTACAGTCTAGTGATCTTGAGTTTGGTATGGAGGTTCATCGGTTTTTGAACGAGAGTCTAATTGAGATGGATGTCAAGCTTTATAATGCTCTTATAGGGTTATATGCAAGATGTGGTAAGTTTGATTGCGCTCGAGAATTGTTTGATGGGATGAGTGAGAAGGATGAAGTGACATATGGCTCATTAGTTTCGGGATACATGTTTCATGGCTTCGTTGATAAAGCCATGGATGTTTTCCGAGAAAGTACCAACCGAAGCTTAAGTACATGGAATGCTATGATTTCGGGTATGGTTCAGAACAGTCGGCATGAGGCTGCCATAGATTTAGTTCGTGAAATGCAGGCATGTGGTTTCAAACCAAATACCGTGACATTATCAAGTGTTCTCCCTGCAATTTCGTATTTCTCAAATTTGAAAGTAGGGAAAGAAACACATGCTTATACAGTCAGAAACAATTTTGATTGGAATATTTATGTTGCAACTGCTGTTATTGATACTTATGCAAAGTCGGGGTTTCTTTCTGGGGCACAACAGGTTTTTGATCAATCAAAATATAAGAGTTTGGTCATTTGGACAGCAATAATCTCAGCTTATGCTGCCCATGGAGATGCTAATGTGTCTATTGGTCTGTTTAACAAGATGATTGGTAGTGGGATACAGCCAGATGAAGTAACATTTACTGCAGTATTAACAGCTTGTTCTCATTCTGGAGCGGTAGACGAAGCTTGGAAAATCTTTAAGGCCATGTTTCCGGTATACGGCATTCACCCTTCAGTTGAGCACTATGCATGCATGGTAGGTGTTCTTAGCCGAGCTGGGAGACTCACTGAAGCTGCAGAGTTAATACAAAACATGTCAATCGAGCCAAGTGCTAAAGTTTGGGGTGCATTACTAAATGGGGCTTCAGTTGCTCGTGATGTTGAACTGGGGAAGTTTGTTTTTGACCGTCTATTTCAGATGGAGCCTGAGAATACCGGGAACTATGTCATTATGGCAAATTTATATGCACAAGCTGGGAGGTGGGAAGAAGCTGATAAAGTCAGGGAAAGAATGAAAGAAGTTGGATTACAGAAAATTCCTGGTATTAGCTGGATTGAAACAAGTGATGGATTACACAGCTTCATAGCAAGGGATGCATCTAATGAAAGAACTGAAGCTATCTATGAAATACTTGAAGGATTGCTAGGATTGATGAAAGAGAAAGGGTATGTTTTGCTGGAGGAATTAGATGAGGAGAGTGTCAATGTTGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CDP-OH_P_transf PPR PPR_2

Protein Analysis

665

Amino Acids

74.39

Weight (kDa)

5.8

Isoelectric Point (pI)

33.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	199 - 248	4.1e-08	PPR repeat family
PPR	PF01535	202 - 229	5.9e-08	PPR repeat
PPR_2	PF13041	335 - 376	6.3e-10	PPR repeat family
PPR	PF01535	335 - 365	2.6e-06	PPR repeat
PPR_2	PF13041	434 - 481	4e-10	PPR repeat family
PPR_long	PF17177	449 - 533	4e-07	Pentacotripeptide-repeat region of PRORP
E_motif	PF20431	553 - 613	2.4e-21	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013262)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37310
fragaria_vesca	FvH4_6g14880
malus_domestica	MD04G1110700.v1.1 MD12G1130100.v1.1 MD15G1361800.v1.1
pyrus_communis	pycom04g10440 pycom12g12620
rosa_chinensis	RchiOBHm_Chr3g0468091
rosa_laevigata	RLG00000024450
rosa_multiflora	Rmu_co8293603.1_g000001 Rmu_co8334519.1_g000001
rosa_roxburghii	Rroxscaffold_6G00413060
rosa_rugosa	Rorug03G0092600
rosa_samantha	Rh3AG141000 Rh3BG162500 Rh3CG162300 Rh3DG163000
rosa_wichuraiana	Rw3G013320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	825
AccBSI	CCGCTC	1 cut(s)	1454
AccI	GTMKAC	2 cut(s)	1458, 1497
AccII	CGCG	2 cut(s)	63, 139
AciI	CCGC	7 cut(s)	93, 103, 127, 130, 137, 163, 1454
AcoI	YGGCCR	3 cut(s)	100, 360, 564
AcsI	RAATTY	5 cut(s)	270, 613, 1150, 1738, 1815
AcuI	CTGAAG	4 cut(s)	1497, 1590, 1629, 1914
AcyI	GRCGYC	1 cut(s)	371
AfaI	GTAC	4 cut(s)	317, 744, 988, 1006
AfiI	CCNNNNNNNGG	2 cut(s)	142, 1499
AflII	CTTAAG	1 cut(s)	1000
AflIII	ACRYGT	2 cut(s)	939, 1593
AgsI	TTSAA	6 cut(s)	790, 1096, 1156, 1664, 1838, 1916
AjnI	CCWGG	2 cut(s)	566, 1819
AjuI	GAANNNNNNNTTGG	2 cut(s)	51, 83
Alw21I	GWGCWC	2 cut(s)	26, 1524
Alw26I	GTCTC	1 cut(s)	1555
Ama87I	CYCGRG	1 cut(s)	873
AoxI	GGCC	7 cut(s)	79, 100, 144, 360, 564, 701, 1482
ApeKI	GCWGC	4 cut(s)	151, 1055, 1337, 1574
ApoI	RAATTY	5 cut(s)	270, 613, 1150, 1738, 1815
ArsI	GACNNNNNNTTYG	2 cut(s)	523, 555
Asp700I	GAANNNNTTC	1 cut(s)	287
AspLEI	GCGC	3 cut(s)	65, 430, 872
AsuC2I	CCSGG	3 cut(s)	189, 448, 1717
AsuHPI	GGTGA	3 cut(s)	112, 709, 1499
AvaI	CYCGRG	1 cut(s)	873
BaeGI	GKGCMC	1 cut(s)	1270
BalI	TGGCCA	1 cut(s)	566
BarI	GAAGNNNNNNTAC	4 cut(s)	988, 1020, 1791, 1823
BauI	CACGAG	1 cut(s)	1653
Bbv12I	GWGCWC	2 cut(s)	26, 1524
BbvI	GCAGC	4 cut(s)	163, 1042, 1324, 1561
BccI	CCATC	5 cut(s)	361, 802, 881, 1693, 1841
BceAI	ACGGC	2 cut(s)	94, 1516
BcgI	CGANNNNNNTGC	4 cut(s)	181, 215, 1592, 1626
BciT130I	CCWGG	2 cut(s)	568, 1821
BciVI	GTATCC	2 cut(s)	929, 1389
BclI	TGATCA	1 cut(s)	1282
BcnI	CCSGG	3 cut(s)	189, 448, 1717
BcoDI	GTCTC	1 cut(s)	1555
BfaI	CTAG	2 cut(s)	750, 1925
BfmI	CTRYAG	3 cut(s)	717, 1422, 1575
BfoI	RGCGCY	1 cut(s)	431
BfrI	CTTAAG	1 cut(s)	1000
BfuI	GTATCC	2 cut(s)	929, 1389
BglI	GCCNNNNNGGC	1 cut(s)	368
BisI	GCNGC	7 cut(s)	93, 103, 130, 152, 1056, 1338, 1575
BlsI	GCNGC	7 cut(s)	94, 104, 131, 153, 1057, 1339, 1576
Bme1390I	CCNGG	5 cut(s)	189, 448, 568, 1717, 1821
BmeT110I	CYCGRG	1 cut(s)	873
BmiI	GGNNCC	1 cut(s)	1704
BmrFI	CCNGG	5 cut(s)	189, 448, 568, 1717, 1821
BmrI	ACTGGG	1 cut(s)	1676
BmsI	GCATC	5 cut(s)	212, 576, 1339, 1864, 1886
BmuI	ACTGGG	1 cut(s)	1676
BpmI	CTGGAG	2 cut(s)	1470, 1979
Bpu10I	CCTNAGC	1 cut(s)	462
BpuEI	CTTGAG	1 cut(s)	779
BpuMI	CCSGG	3 cut(s)	189, 448, 1717
BsaHI	GRCGYC	1 cut(s)	371
BsaJI	CCNNGG	3 cut(s)	567, 966, 1342
BsaWI	WCCGGW	1 cut(s)	1492
Bsc4I	CCNNNNNNNGG	2 cut(s)	142, 1499
Bse1I	ACTGG	1 cut(s)	1671
Bse3DI	GCAATG	1 cut(s)	472
BseBI	CCWGG	2 cut(s)	568, 1821
BseDI	CCNNGG	3 cut(s)	567, 966, 1342
BseGI	GGATG	7 cut(s)	54, 591, 817, 897, 910, 976, 1879
BseLI	CCNNNNNNNGG	2 cut(s)	142, 1499
BseMI	GCAATG	1 cut(s)	472
BseMII	CTCAG	7 cut(s)	48, 290, 338, 476, 650, 1341, 1698
BseNI	ACTGG	1 cut(s)	1671
BseRI	GAGGAG	3 cut(s)	158, 161, 1988
BseSI	GKGCMC	1 cut(s)	1270
BseXI	GCAGC	4 cut(s)	163, 1042, 1324, 1561
BseYI	CCCAGC	4 cut(s)	430, 641, 1556, 1754
Bsh1236I	CGCG	2 cut(s)	63, 139
Bsh1285I	CGRYCG	1 cut(s)	127
BshFI	GGCC	7 cut(s)	81, 102, 146, 362, 566, 703, 1484
BsiEI	CGRYCG	1 cut(s)	127
BsiHKAI	GWGCWC	2 cut(s)	26, 1524
BsiHKCI	CYCGRG	1 cut(s)	873
BsiSI	CCGG	7 cut(s)	189, 383, 395, 447, 590, 1493, 1716
BslFI	GGGAC	1 cut(s)	463
BslI	CCNNNNNNNGG	2 cut(s)	142, 1499
BsmAI	GTCTC	1 cut(s)	1555
BsmFI	GGGAC	1 cut(s)	463
BsmI	GAATGC	3 cut(s)	304, 1018, 1503
BsnI	GGCC	7 cut(s)	81, 102, 146, 362, 566, 703, 1484
BsoBI	CYCGRG	1 cut(s)	873
Bsp1286I	GDGCHC	3 cut(s)	26, 1270, 1524
Bsp1407I	TGTACA	1 cut(s)	742
Bsp143I	GATC	2 cut(s)	754, 1282
Bsp19I	CCATGG	2 cut(s)	966, 1342
BspACI	CCGC	7 cut(s)	93, 103, 127, 130, 137, 163, 1454
BspANI	GGCC	7 cut(s)	81, 102, 146, 362, 566, 703, 1484
BspCNI	CTCAG	7 cut(s)	47, 289, 339, 477, 649, 1340, 1699
BspFNI	CGCG	2 cut(s)	63, 139
BspLI	GGNNCC	1 cut(s)	1704
BspMAI	CTGCAG	3 cut(s)	721, 1426, 1579
BspTI	CTTAAG	1 cut(s)	1000
BsrBI	CCGCTC	1 cut(s)	1454
BsrDI	GCAATG	1 cut(s)	472
BsrGI	TGTACA	1 cut(s)	742
BsrI	ACTGG	1 cut(s)	1671
BssECI	CCNNGG	3 cut(s)	567, 966, 1342
BssMI	GATC	2 cut(s)	754, 1282
BssNAI	GTATAC	1 cut(s)	1498
BssNI	GRCGYC	1 cut(s)	371
BssSI	CACGAG	1 cut(s)	1653
BssT1I	CCWWGG	2 cut(s)	966, 1342
Bst1107I	GTATAC	1 cut(s)	1498
Bst2BI	CACGAG	1 cut(s)	1653
Bst2UI	CCWGG	2 cut(s)	568, 1821
Bst4CI	ACNGT	5 cut(s)	747, 1043, 1108, 1186, 1688
Bst6I	CTCTTC	2 cut(s)	113, 179
BstACI	GRCGYC	1 cut(s)	371
BstAFI	CTTAAG	1 cut(s)	1000
BstAPI	GCANNNNNTGC	1 cut(s)	1874
BstAUI	TGTACA	1 cut(s)	742
BstC8I	GCNNGC	4 cut(s)	163, 735, 1083, 1531
BstDEI	CTNAG	9 cut(s)	34, 276, 347, 462, 485, 636, 1327, 1547, 1707
BstDSI	CCRYGG	2 cut(s)	966, 1342
BstF5I	GGATG	7 cut(s)	54, 591, 817, 897, 910, 976, 1879
BstFNI	CGCG	2 cut(s)	63, 139
BstH2I	RGCGCY	1 cut(s)	431
BstHHI	GCGC	3 cut(s)	65, 430, 872
BstKTI	GATC	2 cut(s)	757, 1285
BstMAI	GTCTC	1 cut(s)	1555
BstMBI	GATC	2 cut(s)	754, 1282
BstMCI	CGRYCG	1 cut(s)	127
BstMWI	GCNNNNNNNGC	5 cut(s)	299, 368, 1337, 1649, 1874
BstNI	CCWGG	2 cut(s)	568, 1821
BstNSI	RCATGY	7 cut(s)	334, 741, 943, 1089, 1178, 1533, 1597
BstSCI	CCNGG	5 cut(s)	187, 446, 566, 1715, 1819
BstSFI	CTRYAG	3 cut(s)	717, 1422, 1575
BstSLI	GKGCMC	1 cut(s)	1270
BstUI	CGCG	2 cut(s)	63, 139
BstV1I	GCAGC	4 cut(s)	163, 1042, 1324, 1561
BstZ17I	GTATAC	1 cut(s)	1498
BsuI	GTATCC	2 cut(s)	929, 1389
BsuRI	GGCC	7 cut(s)	81, 102, 146, 362, 566, 703, 1484
BtgI	CCRYGG	2 cut(s)	966, 1342
BtsCI	GGATG	7 cut(s)	54, 591, 817, 897, 910, 976, 1879
BtsIMutI	CAGTG	1 cut(s)	1566
Cac8I	GCNNGC	4 cut(s)	163, 735, 1083, 1531
CfoI	GCGC	3 cut(s)	65, 430, 872
CseI	GACGC	2 cut(s)	128, 360
Csp6I	GTAC	4 cut(s)	316, 743, 987, 1005
CviQI	GTAC	4 cut(s)	316, 743, 987, 1005
DdeI	CTNAG	9 cut(s)	34, 276, 347, 462, 485, 636, 1327, 1547, 1707
DpnI	GATC	2 cut(s)	756, 1284
DpnII	GATC	2 cut(s)	754, 1282
EaeI	YGGCCR	3 cut(s)	100, 360, 564
Eam1104I	CTCTTC	2 cut(s)	113, 179
EarI	CTCTTC	2 cut(s)	113, 179
Eco130I	CCWWGG	2 cut(s)	966, 1342
Eco147I	AGGCCT	1 cut(s)	703
Eco32I	GATATC	1 cut(s)	601
Eco57I	CTGAAG	4 cut(s)	1497, 1590, 1629, 1914
Eco88I	CYCGRG	1 cut(s)	873
EcoRI	GAATTC	1 cut(s)	613
EcoRII	CCWGG	2 cut(s)	566, 1819
EcoRV	GATATC	1 cut(s)	601
EcoT14I	CCWWGG	2 cut(s)	966, 1342
EcoT22I	ATGCAT	4 cut(s)	336, 1531, 1535, 1879
ErhI	CCWWGG	2 cut(s)	966, 1342
FaqI	GGGAC	1 cut(s)	463
FauI	CCCGC	2 cut(s)	144, 170
FauNDI	CATATG	1 cut(s)	916
FbaI	TGATCA	1 cut(s)	1282
FblI	GTMKAC	2 cut(s)	1458, 1497
Fnu4HI	GCNGC	7 cut(s)	93, 103, 130, 152, 1056, 1338, 1575
FokI	GGATG	7 cut(s)	41, 598, 824, 904, 917, 983, 1886
Fsp4HI	GCNGC	7 cut(s)	93, 103, 130, 152, 1056, 1338, 1575
FspBI	CTAG	2 cut(s)	750, 1925
GlaI	GCGC	3 cut(s)	64, 429, 871
GluI	GCNGC	7 cut(s)	93, 103, 130, 152, 1056, 1338, 1575
GsaI	CCCAGC	4 cut(s)	434, 645, 1560, 1758
GsuI	CTGGAG	2 cut(s)	1470, 1979
HaeII	RGCGCY	1 cut(s)	431
HaeIII	GGCC	7 cut(s)	81, 102, 146, 362, 566, 703, 1484
HapII	CCGG	7 cut(s)	189, 383, 395, 447, 590, 1493, 1716
HgaI	GACGC	2 cut(s)	128, 360
HhaI	GCGC	3 cut(s)	65, 430, 872
Hin1I	GRCGYC	1 cut(s)	371
Hin6I	GCGC	3 cut(s)	63, 428, 870
HinP1I	GCGC	3 cut(s)	63, 428, 870
HindIII	AAGCTT	3 cut(s)	818, 997, 1464
HinfI	GANTC	4 cut(s)	500, 686, 796, 1563
HpaII	CCGG	7 cut(s)	189, 383, 395, 447, 590, 1493, 1716
HphI	GGTGA	3 cut(s)	112, 709, 1499
Hpy166II	GTNNAC	4 cut(s)	9, 743, 1459, 1498
Hpy188I	TCNGA	8 cut(s)	279, 348, 486, 505, 980, 1038, 1190, 1698
Hpy188III	TCNNGA	6 cut(s)	758, 875, 933, 1073, 1449, 1655
Hpy8I	GTNNAC	4 cut(s)	9, 743, 1459, 1498
Hpy99I	CGWCG	2 cut(s)	80, 376
HpyAV	CCTTC	6 cut(s)	77, 418, 688, 895, 1521, 1910
HpyCH4III	ACNGT	5 cut(s)	747, 1043, 1108, 1186, 1688
HpyF10VI	GCNNNNNNNGC	5 cut(s)	299, 368, 1337, 1649, 1874
HpyF3I	CTNAG	9 cut(s)	34, 276, 347, 462, 485, 636, 1327, 1547, 1707
Hsp92I	GRCGYC	1 cut(s)	371
HspAI	GCGC	3 cut(s)	63, 428, 870
Ksp22I	TGATCA	1 cut(s)	1282
Kzo9I	GATC	2 cut(s)	754, 1282
LmnI	GCTCC	3 cut(s)	159, 1451, 1702
Lsp1109I	GCAGC	4 cut(s)	163, 1042, 1324, 1561
LweI	GCATC	5 cut(s)	212, 576, 1339, 1864, 1886
MaeI	CTAG	2 cut(s)	750, 1925
MaeIII	GTNAC	4 cut(s)	712, 910, 1108, 1411
MalI	GATC	2 cut(s)	756, 1284
MbiI	CCGCTC	1 cut(s)	1454
MboI	GATC	2 cut(s)	754, 1282
MboII	GAAGA	4 cut(s)	100, 166, 292, 1778
MhlI	GDGCHC	3 cut(s)	26, 1270, 1524
MlsI	TGGCCA	1 cut(s)	566
MluNI	TGGCCA	1 cut(s)	566
MlyI	GAGTC	3 cut(s)	695, 805, 1557
MmeI	TCCRAC	4 cut(s)	82, 538, 663, 1783
Mox20I	TGGCCA	1 cut(s)	566
Mph1103I	ATGCAT	4 cut(s)	336, 1531, 1535, 1879
MroXI	GAANNNNTTC	1 cut(s)	287
MscI	TGGCCA	1 cut(s)	566
MseI	TTAA	5 cut(s)	1001, 1374, 1430, 1479, 1583
MslI	CAYNNNNRTG	1 cut(s)	1347
Msp20I	TGGCCA	1 cut(s)	566
MspCI	CTTAAG	1 cut(s)	1000
MspI	CCGG	7 cut(s)	189, 383, 395, 447, 590, 1493, 1716
MspR9I	CCNGG	5 cut(s)	189, 448, 568, 1717, 1821
Mva1269I	GAATGC	3 cut(s)	304, 1018, 1503
MvaI	CCWGG	2 cut(s)	568, 1821
MvnI	CGCG	2 cut(s)	63, 139
MwoI	GCNNNNNNNGC	5 cut(s)	299, 368, 1337, 1649, 1874
NciI	CCSGG	3 cut(s)	189, 448, 1717
NcoI	CCATGG	2 cut(s)	966, 1342
NdeI	CATATG	1 cut(s)	916
NdeII	GATC	2 cut(s)	754, 1282
NlaIV	GGNNCC	1 cut(s)	1704
NmeAIII	GCCGAG	1 cut(s)	1577
NmuCI	GTSAC	3 cut(s)	712, 910, 1108
NsiI	ATGCAT	4 cut(s)	336, 1531, 1535, 1879
NspI	RCATGY	7 cut(s)	334, 741, 943, 1089, 1178, 1533, 1597
PaeI	GCATGC	1 cut(s)	1533
PaeR7I	CTCGAG	1 cut(s)	873
PceI	AGGCCT	1 cut(s)	703
PciI	ACATGT	2 cut(s)	939, 1593
PcsI	WCGNNNNNNNCGW	2 cut(s)	386, 614
PctI	GAATGC	3 cut(s)	304, 1018, 1503
PdmI	GAANNNNTTC	1 cut(s)	287
PfeI	GAWTC	1 cut(s)	500
PfoI	TCCNGGA	1 cut(s)	446
PkrI	GCNGC	7 cut(s)	94, 104, 131, 153, 1057, 1339, 1576
PleI	GAGTC	3 cut(s)	694, 804, 1557
PpsI	GAGTC	3 cut(s)	694, 804, 1557
PscI	ACATGT	2 cut(s)	939, 1593
PsiI	TTATAA	1 cut(s)	825
Psp6I	CCWGG	2 cut(s)	566, 1819
PspFI	CCCAGC	4 cut(s)	430, 641, 1556, 1754
PspGI	CCWGG	2 cut(s)	566, 1819
PspN4I	GGNNCC	1 cut(s)	1704
PstI	CTGCAG	3 cut(s)	721, 1426, 1579
RsaI	GTAC	4 cut(s)	317, 744, 988, 1006
RsaNI	GTAC	4 cut(s)	316, 743, 987, 1005
RseI	CAYNNNNRTG	1 cut(s)	1347
SaqAI	TTAA	5 cut(s)	1001, 1374, 1430, 1479, 1583
SatI	GCNGC	7 cut(s)	93, 103, 130, 152, 1056, 1338, 1575
Sau3AI	GATC	2 cut(s)	754, 1282
SchI	GAGTC	3 cut(s)	695, 805, 1557
ScrFI	CCNGG	5 cut(s)	189, 448, 568, 1717, 1821
SduI	GDGCHC	3 cut(s)	26, 1270, 1524
SfaNI	GCATC	5 cut(s)	212, 576, 1339, 1864, 1886
SfcI	CTRYAG	3 cut(s)	717, 1422, 1575
Sfr274I	CTCGAG	1 cut(s)	873
SlaI	CTCGAG	1 cut(s)	873
SmiMI	CAYNNNNRTG	1 cut(s)	1347
SmlI	CTYRAG	3 cut(s)	758, 873, 1000
SmoI	CTYRAG	3 cut(s)	758, 873, 1000
SphI	GCATGC	1 cut(s)	1533
SseBI	AGGCCT	1 cut(s)	703
SsiI	CCGC	7 cut(s)	93, 103, 127, 130, 137, 163, 1454
SspI	AATATT	1 cut(s)	1210
SspMI	CTAG	2 cut(s)	750, 1925
StuI	AGGCCT	1 cut(s)	703
StyD4I	CCNGG	5 cut(s)	187, 446, 566, 1715, 1819
StyI	CCWWGG	2 cut(s)	966, 1342
TaaI	ACNGT	5 cut(s)	747, 1043, 1108, 1186, 1688
TaqI	TCGA	6 cut(s)	84, 264, 542, 617, 874, 1602
TatI	WGTACW	2 cut(s)	742, 1004
TauI	GCSGC	3 cut(s)	95, 105, 132
TfiI	GAWTC	1 cut(s)	500
Tru1I	TTAA	5 cut(s)	1001, 1374, 1430, 1479, 1583
Tru9I	TTAA	5 cut(s)	1001, 1374, 1430, 1479, 1583
TscAI	CASTG	1 cut(s)	1573
TseFI	GTSAC	3 cut(s)	712, 910, 1108
TseI	GCWGC	4 cut(s)	151, 1055, 1337, 1574
Tsp45I	GTSAC	3 cut(s)	712, 910, 1108
TspGWI	ACGGA	1 cut(s)	169
TspRI	CASTG	1 cut(s)	1573
Vha464I	CTTAAG	1 cut(s)	1000
XapI	RAATTY	5 cut(s)	270, 613, 1150, 1738, 1815
XceI	RCATGY	7 cut(s)	334, 741, 943, 1089, 1178, 1533, 1597
XhoI	CTCGAG	1 cut(s)	873
XmiI	GTMKAC	2 cut(s)	1458, 1497
XmnI	GAANNNNTTC	1 cut(s)	287
XspI	CTAG	2 cut(s)	750, 1925
Zsp2I	ATGCAT	4 cut(s)	336, 1531, 1535, 1879

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.