Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0013262

Physical Location & Seq

Genomic Coordinates Reverse (-)

20519239 .. 20521242

Gene Structure 2004 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1130100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGTTGTTATCAAAGTCATTGAACATTCAATTCTCGGCCGCCACCAACGGCTACGTCCAACGTGCCCTTCAGAGCCTCCATGGAATCGACGGGCTCGATTGCGGAGCTTACGGGCACTTCATCCAGCACTGCACGGTGCACCGCCTGGTCCGTCAGGCCAAGCAGCTCCACGCCCGCCTCGTCCTCTACTCCGTCACGCCCGGCAACTTCCTGGCCTCAAAGCTCATCAATTTCTACTCCAAAACCAATAATATCAACTATGCCCGCAAGGTGTTCGACCAAATTCCCCACCCAAATGCTTTCTCCTGGAACGCCATGCTCATTGGGTATTCCATTAACAATATGCACGCCGACAACTTGAAGTGGTTTTCTGCTATGGTGTCTTCGTGTTCGGATCAAGCGAAGCCCGACAATTTTACTGTGACTTGTGTGCTGAAGGCTCTTGGGGTTTTGCTTTCAGGTTCAAAATTGGCTAAGGAAGTACATTGTTTTGTTCTGCGTAGTGGGTTTGATTCGGATGTTTTTGTTGTTAATTCTTTGATTACTTACTACTCGAGATGTGATGAGGTAGGTTTGGCGAGAGCTTTGTTTGACAGGATGCCGGAAAGAGATATTGTGTCGTGGAATTCGATGATTGCAGGGTATTCTCAAGCCGGATACTATGATGAGTGCAAAGAGTTGTATAGGATGATGTTAGGCTTGGAGAAGTTTAAGCCTGTTGGGTTGACAGTGGTGAGTGTGTTGCAGGCATGTTTACAGTCAAATGATCTTATGCTCGGTATGGAGGTTCATCAGTTTGTCATTGAGAATCAAATCGAGATGGATGTTTTGGTTTGCAATGCTCTTATAGGGCTATATGCAAGATGTGGTAGCTTGGATTATGCTCAAGAATTATTTGATGAGATGAGTGAAAAGGATGAGGTCACTTATGGCTCATTAGTTTCGGGGTACATGTTTCACAGGTTTGTTGACAAAGCCATGGATGTTTTTCGAGATAGTAAGAAGCCAAAGTTAAGTACTTGGAATGCTGTGATTTCAGGTTTGGTTCAGAACAACCAGCACGAAGAGGCATTGAATTTAATTCGAGAAATGCAGGCATGTGGTTGCAAACCAAATACCGTGACATTGTCAAGTATTCTTCCCACAATATCGTATTTCTCAAATCTGAAAGTTGGGAAGGAAGTACATGCTTATGCTGTTAGAAACAATTTTGACTGGAATATTTATGTTGCAACTGCCATTATCGATACTTATGCAAAGTCAGGTTTTCTTTACGGGGCACAGAGGGTTTTTGATCAAGCAAAAGGTAAGAGCTTAATCATTTGGACATCAATAATCTCAGCTTATGCATCCCACGGAGATGGTGATACGTCTCTTGGCCTCTTTTATGAGATGCTGAATAGTGGGATTCAACCAGATCAAGTGACAATTACAGCAGTATTAACAGCTTGTGCTCATTCTGGAGTGGTTGATGAGGCTTGGAAAATCTTTGATGCCATGTTTCCGGAATATGGCATTCAGCCCTCAGTTGAGCATTATGCCTGCATGGTAGGCATTCTTAGCCGAGCTGGGAAACTCACCGAAGCTGCAGATTTTATCCACAAAATGCCAGTTGAACCAAGTGCTAAAGTTTGGGGTGCACTACTAAATGGGGCTTCAGTTTCTCGTGATGTTGAATTGGGAAAATTTGTCTGCGATCGCTTGTTTCAAATCGAACCCGAGAATACAGGGAATTACATCATTATGGCGAATTTATATTCACAGGCTGGGAGATGGGAAGAAGCTGATAAGGTCAGGGAGAGAATGAAAGAAGTTGGGCTGAGGAAGATTCCTGGCAGTAGCTGGATTGAAACAAGTAAGGGGTTACAAAGCTTTATAGTGAAGGACACATCAAACGAAAGAACCGAAGAGATCTACGAAACACTGGAAGGATTGCTGGGGATGATGAAAGAAAAAGGGTATGCCTTGCAGGATGAATTAGATGAGGAGAGTGTTAATGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CDP-OH_P_transf PPR PPR_2

Protein Analysis

668

Amino Acids

74.59

Weight (kDa)

5.66

Isoelectric Point (pI)

35.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	206 - 232	1.5e-07	PPR repeat
PPR_2	PF13041	337 - 380	1.7e-11	PPR repeat family
PPR	PF01535	339 - 369	1e-07	PPR repeat
PPR_2	PF13041	439 - 486	7.3e-09	PPR repeat family
PPR	PF01535	441 - 470	8e-06	PPR repeat
PPR_3	PF13812	461 - 519	9e-06	Pentatricopeptide repeat domain
E_motif	PF20431	557 - 617	5.7e-20	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013262)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37310
fragaria_vesca	FvH4_6g14880
malus_domestica	MD04G1110700.v1.1 MD12G1130100.v1.1 MD15G1361800.v1.1
pyrus_communis	pycom04g10440 pycom12g12620
rosa_chinensis	RchiOBHm_Chr3g0468091
rosa_laevigata	RLG00000024450
rosa_multiflora	Rmu_co8293603.1_g000001 Rmu_co8334519.1_g000001
rosa_roxburghii	Rroxscaffold_6G00413060
rosa_rugosa	Rorug03G0092600
rosa_samantha	Rh3AG141000 Rh3BG162500 Rh3CG162300 Rh3DG163000
rosa_wichuraiana	Rw3G013320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccIII	TCCGGA	1 cut(s)	1504
AciI	CCGC	5 cut(s)	39, 102, 142, 175, 265
AclWI	GGATC	1 cut(s)	402
AcoI	YGGCCR	1 cut(s)	36
AcsI	RAATTY	5 cut(s)	282, 625, 1075, 1685, 1750
AcuI	CTGAAG	3 cut(s)	53, 455, 1641
AfaI	GTAC	4 cut(s)	483, 950, 1018, 1185
AfiI	CCNNNNNNNGG	1 cut(s)	1511
AflIII	ACRYGT	1 cut(s)	951
AjnI	CCWGG	4 cut(s)	144, 210, 305, 1831
AjuI	GAANNNNNNNTTGG	2 cut(s)	51, 83
Alw21I	GWGCWC	3 cut(s)	141, 1456, 1642
Alw26I	GTCTC	1 cut(s)	1377
Alw44I	GTGCAC	2 cut(s)	137, 1638
AlwI	GGATC	1 cut(s)	402
AlwNI	CAGNNNCTG	1 cut(s)	1842
Ama87I	CYCGRG	2 cut(s)	553, 1718
Aor13HI	TCCGGA	1 cut(s)	1504
AoxI	GGCC	4 cut(s)	36, 156, 213, 1378
ApaLI	GTGCAC	2 cut(s)	137, 1638
ApeKI	GCWGC	2 cut(s)	163, 1586
ApoI	RAATTY	5 cut(s)	282, 625, 1075, 1685, 1750
AsiSI	GCGATCGC	1 cut(s)	1699
AspS9I	GGNCC	1 cut(s)	148
AsuC2I	CCSGG	1 cut(s)	201
AsuHPI	GGTGA	3 cut(s)	745, 1376, 1570
AvaI	CYCGRG	2 cut(s)	553, 1718
AvaII	GGWCC	1 cut(s)	148
BaeGI	GKGCMC	5 cut(s)	67, 117, 141, 1282, 1642
BanII	GRGCYC	1 cut(s)	96
BauI	CACGAG	1 cut(s)	1665
BbsI	GAAGAC	1 cut(s)	375
Bbv12I	GWGCWC	3 cut(s)	141, 1456, 1642
BbvCI	CCTCAGC	1 cut(s)	1820
BbvI	GCAGC	2 cut(s)	175, 1573
BccI	CCATC	3 cut(s)	814, 1355, 1767
BceAI	ACGGC	1 cut(s)	64
BcgI	CGANNNNNNTGC	4 cut(s)	256, 290, 1235, 1269
BciT130I	CCWGG	4 cut(s)	146, 212, 307, 1833
BciVI	GTATCC	1 cut(s)	650
BclI	TGATCA	1 cut(s)	1294
BcnI	CCSGG	1 cut(s)	201
BcoDI	GTCTC	1 cut(s)	1377
BfmI	CTRYAG	1 cut(s)	1587
BfuI	GTATCC	1 cut(s)	650
BglII	AGATCT	1 cut(s)	1911
BisI	GCNGC	3 cut(s)	39, 164, 1587
BlsI	GCNGC	3 cut(s)	40, 165, 1588
BmcAI	AGTACT	1 cut(s)	1018
Bme1390I	CCNGG	5 cut(s)	146, 201, 212, 307, 1833
Bme18I	GGWCC	1 cut(s)	148
BmeT110I	CYCGRG	2 cut(s)	553, 1718
BmgT120I	GGNCC	1 cut(s)	148
BmrFI	CCNGG	5 cut(s)	146, 201, 212, 307, 1833
BmsI	GCATC	4 cut(s)	588, 1358, 1383, 1483
BpiI	GAAGAC	1 cut(s)	375
BpmI	CTGGAG	1 cut(s)	1482
Bpu10I	CCTNAGC	2 cut(s)	474, 1820
BpuEI	CTTGAG	2 cut(s)	633, 870
BpuMI	CCSGG	1 cut(s)	201
Bsa29I	ATCGAT	1 cut(s)	1245
BsaJI	CCNNGG	3 cut(s)	79, 978, 1354
BsaWI	WCCGGW	1 cut(s)	1504
Bsc4I	CCNNNNNNNGG	1 cut(s)	1511
Bse1I	ACTGG	3 cut(s)	1220, 1610, 1929
Bse3DI	GCAATG	1 cut(s)	844
BseAI	TCCGGA	1 cut(s)	1504
BseBI	CCWGG	4 cut(s)	146, 212, 307, 1833
BseCI	ATCGAT	1 cut(s)	1245
BseDI	CCNNGG	3 cut(s)	79, 978, 1354
BseLI	CCNNNNNNNGG	1 cut(s)	1511
BseMI	GCAATG	1 cut(s)	844
BseMII	CTCAG	3 cut(s)	1353, 1539, 1811
BseNI	ACTGG	3 cut(s)	1220, 1610, 1929
BseRI	GAGGAG	1 cut(s)	2000
BseSI	GKGCMC	5 cut(s)	67, 117, 141, 1282, 1642
BseX3I	CGGCCG	1 cut(s)	36
BseXI	GCAGC	2 cut(s)	175, 1573
BseYI	CCCAGC	3 cut(s)	1568, 1766, 1936
BsgI	GTGCAG	1 cut(s)	115
Bsh1285I	CGRYCG	2 cut(s)	39, 1699
BshFI	GGCC	4 cut(s)	38, 158, 215, 1380
BshVI	ATCGAT	1 cut(s)	1245
BsiEI	CGRYCG	2 cut(s)	39, 1699
BsiHKAI	GWGCWC	3 cut(s)	141, 1456, 1642
BsiHKCI	CYCGRG	2 cut(s)	553, 1718
BsiSI	CCGG	4 cut(s)	201, 602, 654, 1505
BslI	CCNNNNNNNGG	1 cut(s)	1511
BsmAI	GTCTC	1 cut(s)	1377
BsmBI	CGTCTC	1 cut(s)	1377
BsmI	GAATGC	3 cut(s)	1030, 1515, 1554
BsnI	GGCC	4 cut(s)	38, 158, 215, 1380
BsoBI	CYCGRG	2 cut(s)	553, 1718
Bsp1286I	GDGCHC	7 cut(s)	67, 96, 117, 141, 1282, 1456, 1642
Bsp13I	TCCGGA	1 cut(s)	1504
Bsp143I	GATC	6 cut(s)	394, 766, 1294, 1417, 1696, 1911
Bsp19I	CCATGG	2 cut(s)	79, 978
BspACI	CCGC	5 cut(s)	39, 102, 142, 175, 265
BspANI	GGCC	4 cut(s)	38, 158, 215, 1380
BspCNI	CTCAG	3 cut(s)	1352, 1538, 1812
BspDI	ATCGAT	1 cut(s)	1245
BspEI	TCCGGA	1 cut(s)	1504
BspMAI	CTGCAG	1 cut(s)	1591
BspPI	GGATC	1 cut(s)	402
BsrDI	GCAATG	1 cut(s)	844
BsrI	ACTGG	3 cut(s)	1220, 1610, 1929
BssECI	CCNNGG	3 cut(s)	79, 978, 1354
BssMI	GATC	6 cut(s)	394, 766, 1294, 1417, 1696, 1911
BssSI	CACGAG	1 cut(s)	1665
BssT1I	CCWWGG	2 cut(s)	79, 978
Bst2BI	CACGAG	1 cut(s)	1665
Bst2UI	CCWGG	4 cut(s)	146, 212, 307, 1833
Bst4CI	ACNGT	5 cut(s)	136, 421, 730, 759, 1120
Bst6I	CTCTTC	2 cut(s)	1059, 1902
BstC8I	GCNNGC	6 cut(s)	175, 265, 348, 747, 1095, 1543
BstDEI	CTNAG	5 cut(s)	474, 1339, 1525, 1559, 1820
BstDSI	CCRYGG	3 cut(s)	79, 978, 1354
BstKTI	GATC	6 cut(s)	397, 769, 1297, 1420, 1699, 1914
BstMAI	GTCTC	1 cut(s)	1377
BstMBI	GATC	6 cut(s)	394, 766, 1294, 1417, 1696, 1911
BstMCI	CGRYCG	2 cut(s)	39, 1699
BstMWI	GCNNNNNNNGC	2 cut(s)	1551, 1560
BstNI	CCWGG	4 cut(s)	146, 212, 307, 1833
BstNSI	RCATGY	4 cut(s)	753, 955, 1101, 1190
BstSCI	CCNGG	5 cut(s)	144, 199, 210, 305, 1831
BstSFI	CTRYAG	1 cut(s)	1587
BstSLI	GKGCMC	5 cut(s)	67, 117, 141, 1282, 1642
BstV1I	GCAGC	2 cut(s)	175, 1573
BstV2I	GAAGAC	1 cut(s)	375
BstX2I	RGATCY	1 cut(s)	1911
BstXI	CCANNNNNNTGG	1 cut(s)	1361
BstYI	RGATCY	1 cut(s)	1911
BstZI	CGGCCG	1 cut(s)	36
Bsu15I	ATCGAT	1 cut(s)	1245
BsuI	GTATCC	1 cut(s)	650
BsuRI	GGCC	4 cut(s)	38, 158, 215, 1380
BsuTUI	ATCGAT	1 cut(s)	1245
BtgI	CCRYGG	3 cut(s)	79, 978, 1354
BtsI	GCAGTG	1 cut(s)	127
BtsIMutI	CAGTG	3 cut(s)	127, 735, 1922
Cac8I	GCNNGC	6 cut(s)	175, 265, 348, 747, 1095, 1543
CaiI	CAGNNNCTG	1 cut(s)	1842
Cfr13I	GGNCC	1 cut(s)	148
ClaI	ATCGAT	1 cut(s)	1245
Csp6I	GTAC	4 cut(s)	482, 949, 1017, 1184
CviAII	CATG	9 cut(s)	80, 316, 750, 952, 979, 1098, 1187, 1498, 1546
CviQI	GTAC	4 cut(s)	482, 949, 1017, 1184
DdeI	CTNAG	5 cut(s)	474, 1339, 1525, 1559, 1820
DpnI	GATC	6 cut(s)	396, 768, 1296, 1419, 1698, 1913
DpnII	GATC	6 cut(s)	394, 766, 1294, 1417, 1696, 1911
EaeI	YGGCCR	1 cut(s)	36
EagI	CGGCCG	1 cut(s)	36
Eam1104I	CTCTTC	2 cut(s)	1059, 1902
EarI	CTCTTC	2 cut(s)	1059, 1902
EclXI	CGGCCG	1 cut(s)	36
Eco130I	CCWWGG	2 cut(s)	79, 978
Eco24I	GRGCYC	1 cut(s)	96
Eco47I	GGWCC	1 cut(s)	148
Eco52I	CGGCCG	1 cut(s)	36
Eco57I	CTGAAG	3 cut(s)	53, 455, 1641
Eco88I	CYCGRG	2 cut(s)	553, 1718
EcoRI	GAATTC	1 cut(s)	625
EcoRII	CCWGG	4 cut(s)	144, 210, 305, 1831
EcoT14I	CCWWGG	2 cut(s)	79, 978
EcoT22I	ATGCAT	1 cut(s)	1351
EcoT38I	GRGCYC	1 cut(s)	96
ErhI	CCWWGG	2 cut(s)	79, 978
Esp3I	CGTCTC	1 cut(s)	1377
FaeI	CATG	9 cut(s)	83, 319, 753, 955, 982, 1101, 1190, 1501, 1549
FatI	CATG	9 cut(s)	79, 315, 749, 951, 978, 1097, 1186, 1497, 1545
FauI	CCCGC	2 cut(s)	182, 272
FbaI	TGATCA	1 cut(s)	1294
Fnu4HI	GCNGC	3 cut(s)	39, 164, 1587
FriOI	GRGCYC	1 cut(s)	96
Fsp4HI	GCNGC	3 cut(s)	39, 164, 1587
GluI	GCNGC	3 cut(s)	39, 164, 1587
GsaI	CCCAGC	3 cut(s)	1572, 1770, 1940
GsuI	CTGGAG	1 cut(s)	1482
HaeIII	GGCC	4 cut(s)	38, 158, 215, 1380
HapII	CCGG	4 cut(s)	201, 602, 654, 1505
Hin1II	CATG	9 cut(s)	83, 319, 753, 955, 982, 1101, 1190, 1501, 1549
HincII	GTYRAC	2 cut(s)	726, 970
HindII	GTYRAC	2 cut(s)	726, 970
HindIII	AAGCTT	1 cut(s)	1870
HinfI	GANTC	5 cut(s)	84, 512, 808, 1408, 1828
HpaII	CCGG	4 cut(s)	201, 602, 654, 1505
HphI	GGTGA	3 cut(s)	745, 1376, 1570
Hpy166II	GTNNAC	5 cut(s)	139, 726, 755, 970, 1640
Hpy188I	TCNGA	5 cut(s)	72, 394, 517, 1050, 1167
Hpy188III	TCNNGA	8 cut(s)	555, 817, 887, 992, 1085, 1461, 1505, 1667
Hpy8I	GTNNAC	5 cut(s)	139, 726, 755, 970, 1640
Hpy99I	CGWCG	1 cut(s)	92
HpyAV	CCTTC	5 cut(s)	77, 430, 1171, 1876, 1922
HpyCH4III	ACNGT	5 cut(s)	136, 421, 730, 759, 1120
HpyCH4IV	ACGT	3 cut(s)	54, 61, 1370
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1551, 1560
HpyF3I	CTNAG	5 cut(s)	474, 1339, 1525, 1559, 1820
HpySE526I	ACGT	3 cut(s)	54, 61, 1370
Hsp92II	CATG	9 cut(s)	83, 319, 753, 955, 982, 1101, 1190, 1501, 1549
Kpn2I	TCCGGA	1 cut(s)	1504
Ksp22I	TGATCA	1 cut(s)	1294
Kzo9I	GATC	6 cut(s)	394, 766, 1294, 1417, 1696, 1911
LmnI	GCTCC	2 cut(s)	104, 171
Lsp1109I	GCAGC	2 cut(s)	175, 1573
LweI	GCATC	4 cut(s)	588, 1358, 1383, 1483
MaeII	ACGT	3 cut(s)	54, 61, 1370
MaeIII	GTNAC	6 cut(s)	193, 421, 922, 1120, 1423, 1863
MalI	GATC	6 cut(s)	396, 768, 1296, 1419, 1698, 1913
MboI	GATC	6 cut(s)	394, 766, 1294, 1417, 1696, 1911
MboII	GAAGA	6 cut(s)	375, 1076, 1130, 1790, 1837, 1919
MflI	RGATCY	1 cut(s)	1911
MhlI	GDGCHC	7 cut(s)	67, 96, 117, 141, 1282, 1456, 1642
MmeI	TCCRAC	1 cut(s)	82
Mph1103I	ATGCAT	1 cut(s)	1351
MroI	TCCGGA	1 cut(s)	1504
MseI	TTAA	8 cut(s)	336, 531, 711, 1013, 1079, 1316, 1442, 1995
MslI	CAYNNNNRTG	4 cut(s)	294, 1191, 1359, 1742
MspI	CCGG	4 cut(s)	201, 602, 654, 1505
MspR9I	CCNGG	5 cut(s)	146, 201, 212, 307, 1833
Mva1269I	GAATGC	3 cut(s)	1030, 1515, 1554
MvaI	CCWGG	4 cut(s)	146, 212, 307, 1833
MwoI	GCNNNNNNNGC	2 cut(s)	1551, 1560
NciI	CCSGG	1 cut(s)	201
NcoI	CCATGG	2 cut(s)	79, 978
NdeII	GATC	6 cut(s)	394, 766, 1294, 1417, 1696, 1911
NlaIII	CATG	9 cut(s)	83, 319, 753, 955, 982, 1101, 1190, 1501, 1549
NmeAIII	GCCGAG	2 cut(s)	14, 1589
NmuCI	GTSAC	5 cut(s)	193, 421, 922, 1120, 1423
NsiI	ATGCAT	1 cut(s)	1351
NspI	RCATGY	4 cut(s)	753, 955, 1101, 1190
PaeR7I	CTCGAG	1 cut(s)	553
PciI	ACATGT	1 cut(s)	951
PcsI	WCGNNNNNNNCGW	5 cut(s)	93, 177, 398, 626, 1902
PctI	GAATGC	3 cut(s)	1030, 1515, 1554
PfeI	GAWTC	5 cut(s)	84, 512, 808, 1408, 1828
PflFI	GACNNNGTC	1 cut(s)	1126
PfoI	TCCNGGA	1 cut(s)	305
PkrI	GCNGC	3 cut(s)	40, 165, 1588
Ple19I	CGATCG	1 cut(s)	1699
PscI	ACATGT	1 cut(s)	951
Psp6I	CCWGG	4 cut(s)	144, 210, 305, 1831
PspFI	CCCAGC	3 cut(s)	1568, 1766, 1936
PspGI	CCWGG	4 cut(s)	144, 210, 305, 1831
PspPI	GGNCC	1 cut(s)	148
PstI	CTGCAG	1 cut(s)	1591
PstNI	CAGNNNCTG	1 cut(s)	1842
PsuI	RGATCY	1 cut(s)	1911
PsyI	GACNNNGTC	1 cut(s)	1126
PvuI	CGATCG	1 cut(s)	1699
RgaI	GCGATCGC	1 cut(s)	1699
RsaI	GTAC	4 cut(s)	483, 950, 1018, 1185
RsaNI	GTAC	4 cut(s)	482, 949, 1017, 1184
RseI	CAYNNNNRTG	4 cut(s)	294, 1191, 1359, 1742
SaqAI	TTAA	8 cut(s)	336, 531, 711, 1013, 1079, 1316, 1442, 1995
SatI	GCNGC	3 cut(s)	39, 164, 1587
Sau3AI	GATC	6 cut(s)	394, 766, 1294, 1417, 1696, 1911
Sau96I	GGNCC	1 cut(s)	148
ScaI	AGTACT	1 cut(s)	1018
ScrFI	CCNGG	5 cut(s)	146, 201, 212, 307, 1833
SduI	GDGCHC	7 cut(s)	67, 96, 117, 141, 1282, 1456, 1642
SfaAI	GCGATCGC	1 cut(s)	1699
SfaNI	GCATC	4 cut(s)	588, 1358, 1383, 1483
SfcI	CTRYAG	1 cut(s)	1587
Sfr274I	CTCGAG	1 cut(s)	553
SgfI	GCGATCGC	1 cut(s)	1699
SinI	GGWCC	1 cut(s)	148
SlaI	CTCGAG	1 cut(s)	553
SmiMI	CAYNNNNRTG	4 cut(s)	294, 1191, 1359, 1742
SmlI	CTYRAG	3 cut(s)	553, 648, 885
SmoI	CTYRAG	3 cut(s)	553, 648, 885
SsiI	CCGC	5 cut(s)	39, 102, 142, 175, 265
SspI	AATATT	1 cut(s)	1222
StyD4I	CCNGG	5 cut(s)	144, 199, 210, 305, 1831
StyI	CCWWGG	2 cut(s)	79, 978
TaaI	ACNGT	5 cut(s)	136, 421, 730, 759, 1120
TaiI	ACGT	3 cut(s)	57, 64, 1373
TatI	WGTACW	3 cut(s)	481, 1016, 1183
TauI	GCSGC	1 cut(s)	41
TfiI	GAWTC	5 cut(s)	84, 512, 808, 1408, 1828
Tru1I	TTAA	8 cut(s)	336, 531, 711, 1013, 1079, 1316, 1442, 1995
Tru9I	TTAA	8 cut(s)	336, 531, 711, 1013, 1079, 1316, 1442, 1995
TscAI	CASTG	3 cut(s)	134, 735, 1929
TseFI	GTSAC	5 cut(s)	193, 421, 922, 1120, 1423
TseI	GCWGC	2 cut(s)	163, 1586
Tsp45I	GTSAC	5 cut(s)	193, 421, 922, 1120, 1423
TspDTI	ATGAA	5 cut(s)	109, 779, 1820, 1961, 1989
TspGWI	ACGGA	3 cut(s)	140, 181, 1371
TspRI	CASTG	3 cut(s)	134, 735, 1929
Tth111I	GACNNNGTC	1 cut(s)	1126
VneI	GTGCAC	2 cut(s)	137, 1638
VpaK11BI	GGWCC	1 cut(s)	148
XapI	RAATTY	5 cut(s)	282, 625, 1075, 1685, 1750
XceI	RCATGY	4 cut(s)	753, 955, 1101, 1190
XhoI	CTCGAG	1 cut(s)	553
ZrmI	AGTACT	1 cut(s)	1018
Zsp2I	ATGCAT	1 cut(s)	1351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.