Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0004819

Physical Location & Seq

Genomic Coordinates Forward (+)

13950479 .. 13955299

Gene Structure 4821 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g20350.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGGCGACGTACTATCATGGCAACTCGGAAATCCAATCCCCCGACGGCGGCTTGCAGACTCTCGTCCTCATGAACCACGGCGGTTACGTCCCCTACTCCGATGCTACTCAACAGCAACACTCACCGTCGGCAGCAGCGACTAACCAGCAGCTTGTCTTCCTCAACTCAGCTGGGGCCAATAATCAACTTGCTCAGGCCTCCACTCTCCCCCACGCGCCGCCCTCCCACACCCAGCAATTTGTCGGCATACCGCTCCCTACGGTGTCGACTCAAGACCCTAGCAACTCGCAGGGCATGCATCCCCACCACGACATGGCAGCTCTCCACGCCTTCATGCCGCGCATACAGACTCAGTACGCGCTCTGGAACTCAATCGACCCTTCCACGCGTGACACCCCACGCGCCCAGCAGGGTTTGTCACTGAGTCTGTCGTCCCAGCAGCCCGGGTTCGGGTCCTTCCGTGGGGCTGACCGGGAAGTCCCGACTGGTGAGGATATTCGGGTTTCGAGCGGGTCGACCTCTTCGGCTTCCGGTGTGACTAATGGGATTTCGGGTATGCAGAGCGTGTTGCTGAGCTCAAAGTACTTGAAGGCTGCACAGGAGCTTCTTGATGAGGTTGTGAACGTTGGAAATGGGATGAGGACTGAGTTGCCTAAGAAGGGTAATGGCAACCAGAGTAAGGCCATGGCCGAGTCTTCTATGGCGGCCGCCGGAGATGGTTCTGTCGGCGGTGATCAAGATAGTGGGAAGCGTGCTGTAGAGCTAAGCACTGCAGAGAGGCAGGAGATTCAGATGAAGAAGGGAAAGCTCATCACCATGCTTGATGAGGTGGATCAAAGATACAGACAGTACCATCGCCAGATGCAAATGGTGATTGCTTCGTTTGAGCAAGCAGCCGGGATTGGTTCAGCAAGAACATACACTGCTCTTGCACTTCAAACAATCTCAAAGCAATTCAGGTGCTTGAAAGATGCAATAACAAACCAAATCCGAGCCGCCAATAAGAGCTTAGGCGAAGAGGATTGCAGTGGGGGGAAGATTGAAGGTTCAAGGCTCAAATATGTTGACCACCAGCTCAGACAACAAAGAGCTCTCCAACAGTTGGGAATGATCCAGCACAATGCTTGGAGACCCCAAAGAGGATTGCCTGAAAGATCTGTTTCTGTTCTTCGTGCTTGGCTTTTCGAACACTTCCTACACCCCTATCCAAAGGATTCAGACAAGCACTTGCTTGCAAAGCAAACAGGGCTTACTAGGAGCCAGGTTTCAAACTGGTTTATAAATGCTCGAGTTCGTTTGTGGAAGCCGATGGTGGAAGAAATGTACTTGGAGGAAATCAAGGAGAATGAGCTCAATGGATCATCTGAGAAGATAAGCAAGAGCAATGAGGATTCTGCATCAAAGTCCACACCTCCACAAGAGAGAAGTCCTGCTACTGATCAGAACCAAACCAATAGTACTTTCAATTCCAAACAAGAGACTTCCACAAATCATATTGCTGCTCCTCCATCAATGTCAATGTCAATGTCCTCAGCTTCTACATCTCCTACAAACATGGTTCGGAACCAGTCCGGATTCAGCCTCATCGGGTCTTCAGAATTGGATGGCATCACACAGGGTAGTCCAAAGAAGCCAAGGAGCACTGAAATAATGCATTCACCAAATAGTATGATGAACCACATGGACGTCAAGCCTCAAGAGGTGAGCAATGAGCAAGTTTCTATGAAATTTGGGGATGAGAGGCAGAGCAGAGATGGGTACTCATTCATGGGAGGACAGACCAATTTTATTGGGAATTTCGGGCAATATCCAATTGGTGAAATCGGGAGGTTTGATACAGACCAATTCACTCCAAGGTTCTCAGGCAATAGTGTCTCTCTCAGTCTTGGTCTTCCTCATTGTGAAAACCTCTCCTTATCAGGTGCCCATCACCAAACATTTCTTCCAAACCAAAACATTCAATTGGGAAGAAGAGTTGATCACATTGGAGAACCAAATGATCAGTTTGGAACCATGAACACTTCAGCTCCTCACTCTTCTGCTGGATTCGAAAGCATCGACATTCAGAATCGAAAAAGGTTTGTAGCACAATTGTTGCCAGACTTTGTGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009553 GO:0009559 GO:0009561 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009628 GO:0009639 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009987 GO:0010033 GO:0010197 GO:0010201 GO:0010218 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042802 GO:0042803 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046982 GO:0046983 GO:0048229 GO:0048284 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

705

Amino Acids

77.15

Weight (kDa)

6.77

Isoelectric Point (pI)

45.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	189 - 327	4.6e-50	Associated with HOX
Homeobox_KN	PF05920	393 - 432	1e-18	Homeobox KN domain
Homeodomain	PF00046	400 - 432	2.3e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004819)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35940 AT2G35940 AT2G35940
fragaria_vesca	FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350
malus_domestica	MD12G1040700.v1.1 MD14G1039700.v1.1
prunus_persica	Prupe.7G094300_v2.0.a1
pyrus_communis	pycom12g03480 pycom14g03390 pycom14g03400
rosa_chinensis	RchiOBHm_Chr3g0475961
rosa_laevigata	RLG00000023795
rosa_multiflora	Rmu_sc0000585.1_g000030
rosa_roxburghii	Rroxscaffold_6G00405580
rosa_rugosa	Rorug03G0152500 Rorug03G0152600 Rorug03G0152700 Rorug03G0152700
rosa_samantha	Rh3AG203400 Rh3BG233000 Rh3CG228700 Rh3DG228900
rosa_wichuraiana	Rw3G018490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1280
AasI	GACNNNNNNGTC	1 cut(s)	476
AatII	GACGTC	1 cut(s)	1689
AccB1I	GGYRCC	1 cut(s)	1922
AccB7I	CCANNNNNTGG	2 cut(s)	313, 1102
AccBSI	CCGCTC	2 cut(s)	253, 510
AccI	GTMKAC	2 cut(s)	266, 515
AccII	CGCG	5 cut(s)	215, 340, 359, 388, 402
AccIII	TCCGGA	1 cut(s)	1571
AclI	AACGTT	1 cut(s)	624
AclWI	GGATC	3 cut(s)	840, 1105, 1366
AcoI	YGGCCR	2 cut(s)	687, 705
AcsI	RAATTY	2 cut(s)	1727, 1795
AcuI	CTGAAG	2 cut(s)	1578, 2007
AcyI	GRCGYC	1 cut(s)	1686
AfaI	GTAC	7 cut(s)	11, 356, 584, 851, 1325, 1459, 1760
AfiI	CCNNNNNNNGG	9 cut(s)	47, 313, 449, 450, 462, 659, 679, 1102, 1139
AflIII	ACRYGT	1 cut(s)	386
AgsI	TTSAA	8 cut(s)	589, 938, 967, 1043, 1050, 1269, 1465, 1961
AjnI	CCWGG	1 cut(s)	1260
AjuI	GAANNNNNNNTTGG	4 cut(s)	1445, 1477, 1926, 1958
Alw21I	GWGCWC	4 cut(s)	578, 1093, 1353, 1643
Alw26I	GTCTC	3 cut(s)	1123, 1472, 1879
AlwI	GGATC	3 cut(s)	840, 1105, 1366
Ama87I	CYCGRG	2 cut(s)	443, 1287
Aor13HI	TCCGGA	1 cut(s)	1571
AoxI	GGCC	6 cut(s)	174, 195, 681, 687, 705, 2109
ApeKI	GCWGC	8 cut(s)	131, 134, 148, 317, 439, 593, 893, 1499
ApoI	RAATTY	2 cut(s)	1727, 1795
AspLEI	GCGC	4 cut(s)	217, 342, 361, 404
AspS9I	GGNCC	2 cut(s)	174, 453
AsuC2I	CCSGG	4 cut(s)	444, 445, 473, 898
AsuHPI	GGTGA	9 cut(s)	114, 500, 743, 805, 883, 1650, 1714, 1829, 1922
AsuII	TTCGAA	2 cut(s)	1185, 2049
AvaI	CYCGRG	2 cut(s)	443, 1287
AvaII	GGWCC	1 cut(s)	453
BaeGI	GKGCMC	1 cut(s)	1927
BanI	GGYRCC	1 cut(s)	1922
BanII	GRGCYC	3 cut(s)	578, 1093, 1353
BarI	GAAGNNNNNNTAC	2 cut(s)	1417, 1449
BbsI	GAAGAC	4 cut(s)	148, 687, 1584, 1883
Bbv12I	GWGCWC	4 cut(s)	578, 1093, 1353, 1643
BbvCI	CCTCAGC	1 cut(s)	1531
BbvI	GCAGC	8 cut(s)	143, 146, 160, 329, 451, 580, 905, 1486
BccI	CCATC	7 cut(s)	710, 861, 1303, 1516, 1598, 1748, 1935
BceAI	ACGGC	2 cut(s)	61, 94
BciT130I	CCWGG	1 cut(s)	1262
BclI	TGATCA	4 cut(s)	733, 1438, 1978, 1999
BcnI	CCSGG	4 cut(s)	444, 445, 473, 898
BcoDI	GTCTC	3 cut(s)	1123, 1472, 1879
BfaI	CTAG	2 cut(s)	279, 1254
BfmI	CTRYAG	2 cut(s)	756, 771
BglII	AGATCT	1 cut(s)	1154
BlpI	GCTNAGC	2 cut(s)	572, 764
BmcAI	AGTACT	2 cut(s)	584, 1459
Bme1390I	CCNGG	5 cut(s)	444, 445, 473, 898, 1262
Bme18I	GGWCC	1 cut(s)	453
BmeT110I	CYCGRG	2 cut(s)	443, 1287
BmgT120I	GGNCC	2 cut(s)	174, 453
BmiI	GGNNCC	6 cut(s)	175, 454, 1259, 1565, 1924, 2011
BmrFI	CCNGG	5 cut(s)	444, 445, 473, 898, 1262
BmsI	GCATC	7 cut(s)	91, 307, 852, 961, 1406, 1617, 2064
BoxI	GACNNNNGTC	1 cut(s)	62
BpiI	GAAGAC	4 cut(s)	148, 687, 1584, 1883
Bpu10I	CCTNAGC	3 cut(s)	192, 1009, 1531
Bpu1102I	GCTNAGC	2 cut(s)	572, 764
Bpu14I	TTCGAA	2 cut(s)	1185, 2049
BpuEI	CTTGAG	2 cut(s)	255, 1680
BpuMI	CCSGG	4 cut(s)	444, 445, 473, 898
BsaHI	GRCGYC	1 cut(s)	1686
BsaI	GGTCTC	1 cut(s)	1123
BsaJI	CCNNGG	6 cut(s)	76, 443, 460, 684, 1634, 1853
BsaWI	WCCGGW	2 cut(s)	530, 1571
BsaXI	ACNNNNNCTCC	2 cut(s)	2011, 2041
Bsc4I	CCNNNNNNNGG	9 cut(s)	47, 313, 449, 450, 462, 659, 679, 1102, 1139
Bse1I	ACTGG	3 cut(s)	490, 1277, 1567
Bse3DI	GCAATG	2 cut(s)	1390, 1714
BseAI	TCCGGA	1 cut(s)	1571
BseBI	CCWGG	1 cut(s)	1262
BseDI	CCNNGG	6 cut(s)	76, 443, 460, 684, 1634, 1853
BseGI	GGATG	4 cut(s)	298, 642, 1609, 1741
BseLI	CCNNNNNNNGG	9 cut(s)	47, 313, 449, 450, 462, 659, 679, 1102, 1139
BseMI	GCAATG	2 cut(s)	1390, 1714
BseNI	ACTGG	3 cut(s)	490, 1277, 1567
BseRI	GAGGAG	2 cut(s)	1494, 2019
BseSI	GKGCMC	1 cut(s)	1927
BseX3I	CGGCCG	1 cut(s)	705
BseXI	GCAGC	8 cut(s)	143, 146, 160, 329, 451, 580, 905, 1486
BseYI	CCCAGC	4 cut(s)	170, 231, 405, 435
BsgI	GTGCAG	1 cut(s)	579
Bsh1236I	CGCG	5 cut(s)	215, 340, 359, 388, 402
Bsh1285I	CGRYCG	1 cut(s)	708
BshFI	GGCC	6 cut(s)	176, 197, 683, 689, 707, 2111
BshNI	GGYRCC	1 cut(s)	1922
BsiEI	CGRYCG	1 cut(s)	708
BsiHKAI	GWGCWC	4 cut(s)	578, 1093, 1353, 1643
BsiHKCI	CYCGRG	2 cut(s)	443, 1287
BsiSI	CCGG	6 cut(s)	444, 472, 531, 711, 897, 1572
BslFI	GGGAC	3 cut(s)	74, 418, 464
BslI	CCNNNNNNNGG	9 cut(s)	47, 313, 449, 450, 462, 659, 679, 1102, 1139
BsmAI	GTCTC	3 cut(s)	1123, 1472, 1879
BsmFI	GGGAC	3 cut(s)	74, 418, 464
BsmI	GAATGC	1 cut(s)	1654
BsnI	GGCC	6 cut(s)	176, 197, 683, 689, 707, 2111
Bso31I	GGTCTC	1 cut(s)	1123
BsoBI	CYCGRG	2 cut(s)	443, 1287
Bsp119I	TTCGAA	2 cut(s)	1185, 2049
Bsp1286I	GDGCHC	5 cut(s)	578, 1093, 1353, 1643, 1927
Bsp13I	TCCGGA	1 cut(s)	1571
Bsp143I	GATC	8 cut(s)	733, 832, 1110, 1154, 1358, 1438, 1978, 1999
Bsp1720I	GCTNAGC	2 cut(s)	572, 764
Bsp19I	CCATGG	1 cut(s)	684
BspANI	GGCC	6 cut(s)	176, 197, 683, 689, 707, 2111
BspEI	TCCGGA	1 cut(s)	1571
BspFNI	CGCG	5 cut(s)	215, 340, 359, 388, 402
BspHI	TCATGA	1 cut(s)	69
BspLI	GGNNCC	6 cut(s)	175, 454, 1259, 1565, 1924, 2011
BspMAI	CTGCAG	1 cut(s)	775
BspPI	GGATC	3 cut(s)	840, 1105, 1366
BspT104I	TTCGAA	2 cut(s)	1185, 2049
BspT107I	GGYRCC	1 cut(s)	1922
BspTNI	GGTCTC	1 cut(s)	1123
BsrBI	CCGCTC	2 cut(s)	253, 510
BsrDI	GCAATG	2 cut(s)	1390, 1714
BsrI	ACTGG	3 cut(s)	490, 1277, 1567
BssECI	CCNNGG	6 cut(s)	76, 443, 460, 684, 1634, 1853
BssMI	GATC	8 cut(s)	733, 832, 1110, 1154, 1358, 1438, 1978, 1999
BssNI	GRCGYC	1 cut(s)	1686
BssT1I	CCWWGG	3 cut(s)	684, 1634, 1853
Bst2UI	CCWGG	1 cut(s)	1262
Bst4CI	ACNGT	4 cut(s)	126, 262, 849, 1101
Bst6I	CTCTTC	4 cut(s)	526, 1011, 1966, 2041
BstACI	GRCGYC	1 cut(s)	1686
BstAPI	GCANNNNNTGC	1 cut(s)	295
BstBI	TTCGAA	2 cut(s)	1185, 2049
BstC8I	GCNNGC	5 cut(s)	53, 296, 753, 891, 1233
BstDSI	CCRYGG	3 cut(s)	76, 460, 684
BstF5I	GGATG	4 cut(s)	298, 642, 1609, 1741
BstFNI	CGCG	5 cut(s)	215, 340, 359, 388, 402
BstHHI	GCGC	4 cut(s)	217, 342, 361, 404
BstKTI	GATC	8 cut(s)	736, 835, 1113, 1157, 1361, 1441, 1981, 2002
BstMAI	GTCTC	3 cut(s)	1123, 1472, 1879
BstMBI	GATC	8 cut(s)	733, 832, 1110, 1154, 1358, 1438, 1978, 1999
BstMCI	CGRYCG	1 cut(s)	708
BstMWI	GCNNNNNNNGC	4 cut(s)	295, 326, 1237, 1246
BstNI	CCWGG	1 cut(s)	1262
BstNSI	RCATGY	1 cut(s)	298
BstPAI	GACNNNNGTC	1 cut(s)	62
BstSCI	CCNGG	5 cut(s)	442, 443, 471, 896, 1260
BstSFI	CTRYAG	2 cut(s)	756, 771
BstSLI	GKGCMC	1 cut(s)	1927
BstUI	CGCG	5 cut(s)	215, 340, 359, 388, 402
BstV1I	GCAGC	8 cut(s)	143, 146, 160, 329, 451, 580, 905, 1486
BstV2I	GAAGAC	4 cut(s)	148, 687, 1584, 1883
BstX2I	RGATCY	1 cut(s)	1154
BstYI	RGATCY	1 cut(s)	1154
BstZI	CGGCCG	1 cut(s)	705
BsuRI	GGCC	6 cut(s)	176, 197, 683, 689, 707, 2111
BtgI	CCRYGG	3 cut(s)	76, 460, 684
BtgZI	GCGATG	1 cut(s)	839
BtsCI	GGATG	4 cut(s)	298, 642, 1609, 1741
BtsI	GCAGTG	3 cut(s)	768, 921, 1033
BtsIMutI	CAGTG	5 cut(s)	419, 768, 921, 1033, 1641
Cac8I	GCNNGC	5 cut(s)	53, 296, 753, 891, 1233
CciI	TCATGA	1 cut(s)	69
CciNI	GCGGCCGC	1 cut(s)	705
CfoI	GCGC	4 cut(s)	217, 342, 361, 404
Cfr13I	GGNCC	2 cut(s)	174, 453
Cfr9I	CCCGGG	1 cut(s)	443
Csp6I	GTAC	7 cut(s)	10, 355, 583, 850, 1324, 1458, 1759
CviQI	GTAC	7 cut(s)	10, 355, 583, 850, 1324, 1458, 1759
DpnI	GATC	8 cut(s)	735, 834, 1112, 1156, 1360, 1440, 1980, 2001
DpnII	GATC	8 cut(s)	733, 832, 1110, 1154, 1358, 1438, 1978, 1999
DrdI	GACNNNNNNGTC	1 cut(s)	476
DseDI	GACNNNNNNGTC	1 cut(s)	476
EaeI	YGGCCR	2 cut(s)	687, 705
EagI	CGGCCG	1 cut(s)	705
Eam1104I	CTCTTC	4 cut(s)	526, 1011, 1966, 2041
EarI	CTCTTC	4 cut(s)	526, 1011, 1966, 2041
Ecl136II	GAGCTC	3 cut(s)	576, 1091, 1351
EclXI	CGGCCG	1 cut(s)	705
Eco130I	CCWWGG	3 cut(s)	684, 1634, 1853
Eco147I	AGGCCT	1 cut(s)	197
Eco24I	GRGCYC	3 cut(s)	578, 1093, 1353
Eco31I	GGTCTC	1 cut(s)	1123
Eco47I	GGWCC	1 cut(s)	453
Eco52I	CGGCCG	1 cut(s)	705
Eco53kI	GAGCTC	3 cut(s)	576, 1091, 1351
Eco57I	CTGAAG	2 cut(s)	1578, 2007
Eco88I	CYCGRG	2 cut(s)	443, 1287
EcoICRI	GAGCTC	3 cut(s)	576, 1091, 1351
EcoO109I	RGGNCCY	1 cut(s)	453
EcoRII	CCWGG	1 cut(s)	1260
EcoT14I	CCWWGG	3 cut(s)	684, 1634, 1853
EcoT22I	ATGCAT	2 cut(s)	300, 1656
EcoT38I	GRGCYC	3 cut(s)	578, 1093, 1353
ErhI	CCWWGG	3 cut(s)	684, 1634, 1853
FaqI	GGGAC	3 cut(s)	74, 418, 464
FauI	CCCGC	1 cut(s)	503
FbaI	TGATCA	4 cut(s)	733, 1438, 1978, 1999
FblI	GTMKAC	2 cut(s)	266, 515
FokI	GGATG	4 cut(s)	285, 649, 1616, 1748
FriOI	GRGCYC	3 cut(s)	578, 1093, 1353
FspBI	CTAG	2 cut(s)	279, 1254
GlaI	GCGC	4 cut(s)	216, 341, 360, 403
GsaI	CCCAGC	4 cut(s)	174, 235, 409, 439
HaeIII	GGCC	6 cut(s)	176, 197, 683, 689, 707, 2111
HapII	CCGG	6 cut(s)	444, 472, 531, 711, 897, 1572
HhaI	GCGC	4 cut(s)	217, 342, 361, 404
Hin1I	GRCGYC	1 cut(s)	1686
Hin6I	GCGC	4 cut(s)	215, 340, 359, 402
HinP1I	GCGC	4 cut(s)	215, 340, 359, 402
HincII	GTYRAC	3 cut(s)	267, 516, 1066
HindII	GTYRAC	3 cut(s)	267, 516, 1066
HpaII	CCGG	6 cut(s)	444, 472, 531, 711, 897, 1572
HphI	GGTGA	9 cut(s)	114, 500, 743, 805, 883, 1650, 1714, 1829, 1922
Hpy166II	GTNNAC	5 cut(s)	267, 516, 622, 1066, 1407
Hpy188III	TCNNGA	9 cut(s)	70, 272, 364, 481, 608, 737, 1572, 1697, 1825
Hpy8I	GTNNAC	5 cut(s)	267, 516, 622, 1066, 1407
Hpy99I	CGWCG	3 cut(s)	10, 47, 130
HpyAV	CCTTC	7 cut(s)	340, 390, 466, 583, 652, 793, 1037
HpyCH4III	ACNGT	4 cut(s)	126, 262, 849, 1101
HpyCH4IV	ACGT	4 cut(s)	8, 87, 624, 1686
HpyF10VI	GCNNNNNNNGC	4 cut(s)	295, 326, 1237, 1246
HpySE526I	ACGT	4 cut(s)	8, 87, 624, 1686
Hsp92I	GRCGYC	1 cut(s)	1686
HspAI	GCGC	4 cut(s)	215, 340, 359, 402
Kpn2I	TCCGGA	1 cut(s)	1571
Ksp22I	TGATCA	4 cut(s)	733, 1438, 1978, 1999
Kzo9I	GATC	8 cut(s)	733, 832, 1110, 1154, 1358, 1438, 1978, 1999
LmnI	GCTCC	6 cut(s)	258, 601, 1257, 1507, 1638, 2032
Lsp1109I	GCAGC	8 cut(s)	143, 146, 160, 329, 451, 580, 905, 1486
LweI	GCATC	7 cut(s)	91, 307, 852, 961, 1406, 1617, 2064
MaeI	CTAG	2 cut(s)	279, 1254
MaeII	ACGT	4 cut(s)	8, 87, 624, 1686
MaeIII	GTNAC	4 cut(s)	83, 389, 417, 535
MalI	GATC	8 cut(s)	735, 834, 1112, 1156, 1360, 1440, 1980, 2001
MbiI	CCGCTC	2 cut(s)	253, 510
MboI	GATC	8 cut(s)	733, 832, 1110, 1154, 1358, 1438, 1978, 1999
MfeI	CAATTG	3 cut(s)	1812, 1961, 2090
MflI	RGATCY	1 cut(s)	1154
MhlI	GDGCHC	5 cut(s)	578, 1093, 1353, 1643, 1927
MluI	ACGCGT	1 cut(s)	386
MlyI	GAGTC	5 cut(s)	52, 262, 343, 433, 701
MmeI	TCCRAC	2 cut(s)	607, 1120
Mph1103I	ATGCAT	2 cut(s)	300, 1656
MroI	TCCGGA	1 cut(s)	1571
MslI	CAYNNNNRTG	1 cut(s)	815
MspA1I	CMGCKG	1 cut(s)	170
MspI	CCGG	6 cut(s)	444, 472, 531, 711, 897, 1572
MspR9I	CCNGG	5 cut(s)	444, 445, 473, 898, 1262
MunI	CAATTG	3 cut(s)	1812, 1961, 2090
Mva1269I	GAATGC	1 cut(s)	1654
MvaI	CCWGG	1 cut(s)	1262
MvnI	CGCG	5 cut(s)	215, 340, 359, 388, 402
MwoI	GCNNNNNNNGC	4 cut(s)	295, 326, 1237, 1246
NciI	CCSGG	4 cut(s)	444, 445, 473, 898
NcoI	CCATGG	1 cut(s)	684
NdeII	GATC	8 cut(s)	733, 832, 1110, 1154, 1358, 1438, 1978, 1999
NlaIV	GGNNCC	6 cut(s)	175, 454, 1259, 1565, 1924, 2011
NmeAIII	GCCGAG	1 cut(s)	715
NmuCI	GTSAC	3 cut(s)	389, 417, 535
NotI	GCGGCCGC	1 cut(s)	705
NsiI	ATGCAT	2 cut(s)	300, 1656
NspI	RCATGY	1 cut(s)	298
NspV	TTCGAA	2 cut(s)	1185, 2049
PaeI	GCATGC	1 cut(s)	298
PaeR7I	CTCGAG	1 cut(s)	1287
PagI	TCATGA	1 cut(s)	69
PceI	AGGCCT	1 cut(s)	197
PcsI	WCGNNNNNNNCGW	4 cut(s)	84, 134, 512, 2055
PctI	GAATGC	1 cut(s)	1654
PfeI	GAWTC	6 cut(s)	787, 1214, 1391, 1575, 2046, 2068
PflMI	CCANNNNNTGG	2 cut(s)	313, 1102
PleI	GAGTC	5 cut(s)	52, 262, 343, 432, 700
PpsI	GAGTC	5 cut(s)	52, 262, 343, 432, 700
PpuMI	RGGWCCY	1 cut(s)	453
PshAI	GACNNNNGTC	1 cut(s)	62
PsiI	TTATAA	1 cut(s)	1280
Psp124BI	GAGCTC	3 cut(s)	578, 1093, 1353
Psp1406I	AACGTT	1 cut(s)	624
Psp5II	RGGWCCY	1 cut(s)	453
Psp6I	CCWGG	1 cut(s)	1260
PspFI	CCCAGC	4 cut(s)	170, 231, 405, 435
PspGI	CCWGG	1 cut(s)	1260
PspN4I	GGNNCC	6 cut(s)	175, 454, 1259, 1565, 1924, 2011
PspPI	GGNCC	2 cut(s)	174, 453
PspPPI	RGGWCCY	1 cut(s)	453
PspXI	VCTCGAGB	1 cut(s)	1287
PsrI	GAACNNNNNNTAC	2 cut(s)	1179, 1211
PstI	CTGCAG	1 cut(s)	775
PsuI	RGATCY	1 cut(s)	1154
PvuII	CAGCTG	1 cut(s)	170
RsaI	GTAC	7 cut(s)	11, 356, 584, 851, 1325, 1459, 1760
RsaNI	GTAC	7 cut(s)	10, 355, 583, 850, 1324, 1458, 1759
RseI	CAYNNNNRTG	1 cut(s)	815
SacI	GAGCTC	3 cut(s)	578, 1093, 1353
SalI	GTCGAC	2 cut(s)	265, 514
Sau3AI	GATC	8 cut(s)	733, 832, 1110, 1154, 1358, 1438, 1978, 1999
Sau96I	GGNCC	2 cut(s)	174, 453
ScaI	AGTACT	2 cut(s)	584, 1459
SchI	GAGTC	5 cut(s)	52, 262, 343, 433, 701
ScrFI	CCNGG	5 cut(s)	444, 445, 473, 898, 1262
SduI	GDGCHC	5 cut(s)	578, 1093, 1353, 1643, 1927
SfaNI	GCATC	7 cut(s)	91, 307, 852, 961, 1406, 1617, 2064
SfcI	CTRYAG	2 cut(s)	756, 771
Sfr274I	CTCGAG	1 cut(s)	1287
SfuI	TTCGAA	2 cut(s)	1185, 2049
SinI	GGWCC	1 cut(s)	453
SlaI	CTCGAG	1 cut(s)	1287
SmaI	CCCGGG	1 cut(s)	445
SmiMI	CAYNNNNRTG	1 cut(s)	815
SmlI	CTYRAG	3 cut(s)	270, 1287, 1695
SmoI	CTYRAG	3 cut(s)	270, 1287, 1695
SphI	GCATGC	1 cut(s)	298
SseBI	AGGCCT	1 cut(s)	197
SspMI	CTAG	2 cut(s)	279, 1254
SstI	GAGCTC	3 cut(s)	578, 1093, 1353
StuI	AGGCCT	1 cut(s)	197
StyD4I	CCNGG	5 cut(s)	442, 443, 471, 896, 1260
StyI	CCWWGG	3 cut(s)	684, 1634, 1853
TaaI	ACNGT	4 cut(s)	126, 262, 849, 1101
TaiI	ACGT	4 cut(s)	11, 90, 627, 1689
TaqI	TCGA	9 cut(s)	266, 375, 506, 515, 1185, 1288, 2049, 2058, 2071
TatI	WGTACW	3 cut(s)	582, 1323, 1457
TauI	GCSGC	6 cut(s)	51, 220, 340, 707, 710, 998
TfiI	GAWTC	6 cut(s)	787, 1214, 1391, 1575, 2046, 2068
TscAI	CASTG	5 cut(s)	426, 775, 928, 1033, 1648
TseFI	GTSAC	3 cut(s)	389, 417, 535
TseI	GCWGC	8 cut(s)	131, 134, 148, 317, 439, 593, 893, 1499
Tsp45I	GTSAC	3 cut(s)	389, 417, 535
TspDTI	ATGAA	7 cut(s)	86, 322, 809, 1688, 1739, 1756, 2030
TspGWI	ACGGA	1 cut(s)	449
TspMI	CCCGGG	1 cut(s)	443
TspRI	CASTG	5 cut(s)	426, 775, 928, 1033, 1648
Van91I	CCANNNNNTGG	2 cut(s)	313, 1102
VpaK11BI	GGWCC	1 cut(s)	453
XapI	RAATTY	2 cut(s)	1727, 1795
XceI	RCATGY	1 cut(s)	298
XhoI	CTCGAG	1 cut(s)	1287
XmaI	CCCGGG	1 cut(s)	443
XmiI	GTMKAC	2 cut(s)	266, 515
XspI	CTAG	2 cut(s)	279, 1254
ZraI	GACGTC	1 cut(s)	1687
ZrmI	AGTACT	2 cut(s)	584, 1459
Zsp2I	ATGCAT	2 cut(s)	300, 1656

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.