Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0004819

Physical Location & Seq

Genomic Coordinates Forward (+)

3716304 .. 3720437

Gene Structure 4134 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1039700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGGCGGCCTACTTTCATCACCACGGTGGCAACTCATCGGAAATCCAAGCCTCCTCCGATGGCGCCTTGCAAACCCTTGTTCTCATGAATCCCGGTTACGTCCAATACTCCGACACTCCACCTCCACCACAGCAGCAGCAACAACAGCCTCAACCCCCATCCGCCGCCACCAACCTTGTTTTTCTCAACTCAGCCCCCAATTCCCTCACTCATCATCCCTCCACTCTCTCCCACGCGCCTCCCTCCCACCACCAACAATTCCTCGGTATCCCGCTGACGCAAGACCCCAACGGTAACAGCTCCCTATCCATGCACCACCCCCACCATGACATCTCCGCCCTGCATGCCTTCATGCCGAGAATTCAGACTCAGTACGCGCTTTGGAACTCAATTGACCCGGCCGCATCCACGCGTGACACCCCACGCTCTCAGCAGGGCCTGTCTTTGAGTCTCTCCTCGCAGCAACCGGGTTTTGGGTCGTTCCAGGAGACCTCCGCCGAGAGGGAGGTCCCGTCCGGGGAAGATATTCGGGTTTCGAGTGGGTCGAATTCGTCGGCTTCCGGTGTGACGAATGGGGTTTCGGGTATGCAGAGCGTGCTGCTGAGCTCAAAGTACTTGAAGGCGGCGCAGGAGCTGCTCGATGAGTTTGTGAACGTCGGGAATGGGATGAGGACTGAGCTGCCAAAGAAGGGTAATGGGCAGCAGAGTAAAGCGGCAGCTGAGTCCTCGATGGCGGAGGCCAGAGACGGTTCAGTAGGCCGTGAAGGGAGTGGAAAGCGTGCGGCTGAGTTGAGCACTGCTGAGAGGCAGGAAATTCAGATGAAGAAGGGGAAGCTAATCAACATGCTTGATGAGGTGGACCAAAGATACAGGCAATACCACCGGCAGATGCAAATGGTGATTTCATCATTTGAGCAAGCAGCTGGAATTGGCTCAGCAAGAACATACACTGCTCTGGCACTGCAAACAATCTCAAAGCAATTCAGGTGCCTGAAGGACGCCATAACGAACCAAATTCGATCCGCCAACAAGAGCTTGGGAGAAGAAGATAGCGTTGGAGGTAAGATTGAAGGCTCAAGGCTCAAATATGTTGACCATCAGCTGAGGCAGCAAAGGGCTCTCCAACAGTTGGGAATGGTCCAGCACAATGCTTGGAGACCACAAAGAGGATTGCCAGAAAGATCTGTTTCTGTTCTTCGCGCTTGGCTCTTCGAACACTTCCTCCACCCATATCCGAAGGATTCAGATAAGCACATGCTTGCAAAACAAACTGGACTCACTAGGAGTCAGGTTTCCAATTGGTTTATAAACGCTCGTGTCCGGCTGTGGAAGCCAATGGTGGAGGAGATGTACTTGGAGGAAGCGAAGGAGCAAGAGAAGAATGGATCATCTGAGAAAATGAGCAAGAGCAATGAAGACTCTGCATCAAAGTCCACAGCTCCACAAGACACTGAGAACCAAACAACAAGCACTTTCAACTCCAAACAAGAGAATTCGGTGAATCACAATGTTGCTACTCATCCTTCAAGGTCGATTTCCACACCCTCGACATCTCCCACAAACATGGTCCGGAACCAGTCCGGATTCACTCTCATTGGGTCATCAGAACTCGATGGGATTACACAAGGCAGTCCGAAGAAGCCTAGGAGCACCGAAATTATGCACTCCTCAAACAGTGCTGTCCCATGTATGAATATGGAGTCCCAAGAGGTGAGCAATGAGCAAGTTTCTATGAAATTCGGGAACGAGAGGCAGGGGAGAGATGGCTACTCTTTCATGGGAGGGCAGACTAATTTCATCGGAAATTTTGGGCAATACCCGATTGGCGAAATTGGCAGGTTTGATGCAGACCAATTCACACCAAGGTTCTCAGGCAATGGTGTCTCTCTCACTCTAGGTCTTCCTCACTGTGAAAACCTCTCCTTATCCGGAGCTCACCACCATCAAACTTTTCTCCCAAACCAAAACATTCAGCTGGGGAGAAGAGTAGACATTGGTGAAACAAATGATCAATTTGGCGCCATAAACACTTCAGCTCCTCACTCATCTGCTGCTGCATTCGAAAACATCGACATTCAGAACCGAAAGAGGTTCGTAGCCCAATTGTTACCGGACTTTGTGGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009553 GO:0009559 GO:0009561 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009628 GO:0009639 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009987 GO:0010033 GO:0010197 GO:0010201 GO:0010218 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042802 GO:0042803 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046982 GO:0046983 GO:0048229 GO:0048284 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

709

Amino Acids

77.8

Weight (kDa)

6.99

Isoelectric Point (pI)

46.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	199 - 336	2.9e-50	Associated with HOX
Homeobox_KN	PF05920	402 - 441	1.9e-19	Homeobox KN domain
Homeodomain	PF00046	409 - 441	1.2e-06	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004819)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35940 AT2G35940 AT2G35940
fragaria_vesca	FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350
malus_domestica	MD12G1040700.v1.1 MD14G1039700.v1.1
prunus_persica	Prupe.7G094300_v2.0.a1
pyrus_communis	pycom12g03480 pycom14g03390 pycom14g03400
rosa_chinensis	RchiOBHm_Chr3g0475961
rosa_laevigata	RLG00000023795
rosa_multiflora	Rmu_sc0000585.1_g000030
rosa_roxburghii	Rroxscaffold_6G00405580
rosa_rugosa	Rorug03G0152500 Rorug03G0152600 Rorug03G0152700 Rorug03G0152700
rosa_samantha	Rh3AG203400 Rh3BG233000 Rh3CG228700 Rh3DG228900
rosa_wichuraiana	Rw3G018490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1307
Acc36I	ACCTGC	1 cut(s)	1827
AccB1I	GGYRCC	3 cut(s)	62, 987, 2018
AccB7I	CCANNNNNTGG	1 cut(s)	1129
AccI	GTMKAC	1 cut(s)	1989
AccII	CGCG	4 cut(s)	236, 377, 412, 1200
AccIII	TCCGGA	3 cut(s)	1569, 1580, 1928
AclWI	GGATC	2 cut(s)	1014, 1393
AcoI	YGGCCR	1 cut(s)	399
AcsI	RAATTY	7 cut(s)	360, 547, 813, 1014, 1492, 1736, 1804
AcuI	CTGAAG	2 cut(s)	1013, 2016
AcyI	GRCGYC	3 cut(s)	63, 999, 2019
AfaI	GTAC	3 cut(s)	374, 614, 1352
AfiI	CCNNNNNNNGG	6 cut(s)	473, 501, 517, 689, 1129, 1166
AflIII	ACRYGT	1 cut(s)	410
AgsI	TTSAA	4 cut(s)	619, 1070, 1477, 1527
AjnI	CCWGG	1 cut(s)	483
AjuI	GAANNNNNNNTTGG	2 cut(s)	1038, 1070
AleI	CACNNNNGTG	1 cut(s)	24
AloI	GAACNNNNNNTCC	2 cut(s)	1206, 1238
Alw21I	GWGCWC	4 cut(s)	608, 797, 1652, 1936
Alw26I	GTCTC	5 cut(s)	455, 482, 738, 1150, 1888
AlwI	GGATC	2 cut(s)	1014, 1393
AlwNI	CAGNNNCTG	2 cut(s)	439, 634
Aor13HI	TCCGGA	3 cut(s)	1569, 1580, 1928
AoxI	GGCC	5 cut(s)	6, 399, 436, 738, 757
ApoI	RAATTY	7 cut(s)	360, 547, 813, 1014, 1492, 1736, 1804
Asp700I	GAANNNNTTC	1 cut(s)	525
AspA2I	CCTAGG	1 cut(s)	1643
AspLEI	GCGC	6 cut(s)	65, 238, 379, 628, 1202, 2021
AspS9I	GGNCC	5 cut(s)	436, 508, 859, 1138, 1567
AsuC2I	CCSGG	4 cut(s)	93, 398, 468, 517
AsuHPI	GGTGA	6 cut(s)	11, 910, 1510, 1723, 1928, 2009
AsuII	TTCGAA	2 cut(s)	1212, 2061
AvaII	GGWCC	4 cut(s)	508, 859, 1138, 1567
AvrII	CCTAGG	1 cut(s)	1643
BanI	GGYRCC	3 cut(s)	62, 987, 2018
BanII	GRGCYC	3 cut(s)	608, 1120, 1936
BauI	CACGAG	1 cut(s)	1314
BbsI	GAAGAC	2 cut(s)	1422, 1892
Bbv12I	GWGCWC	4 cut(s)	608, 797, 1652, 1936
BbvCI	CCTCAGC	1 cut(s)	1103
BccI	CCATC	7 cut(s)	53, 166, 724, 1104, 1607, 1757, 1950
BceAI	ACGGC	1 cut(s)	744
BciT130I	CCWGG	1 cut(s)	485
BciVI	GTATCC	1 cut(s)	278
BclI	TGATCA	1 cut(s)	2008
BcnI	CCSGG	4 cut(s)	93, 398, 468, 517
BcoDI	GTCTC	5 cut(s)	455, 482, 738, 1150, 1888
BfaI	CTAG	3 cut(s)	1281, 1644, 1895
BfoI	RGCGCY	2 cut(s)	66, 2022
BfuAI	ACCTGC	1 cut(s)	1827
BfuI	GTATCC	1 cut(s)	278
BglII	AGATCT	1 cut(s)	1181
BlnI	CCTAGG	1 cut(s)	1643
BlpI	GCTNAGC	2 cut(s)	602, 934
BmcAI	AGTACT	1 cut(s)	614
Bme1390I	CCNGG	5 cut(s)	93, 398, 468, 485, 517
Bme18I	GGWCC	4 cut(s)	508, 859, 1138, 1567
BmgT120I	GGNCC	5 cut(s)	436, 508, 859, 1138, 1567
BmiI	GGNNCC	5 cut(s)	64, 510, 989, 1574, 2020
BmrFI	CCNGG	5 cut(s)	93, 398, 468, 485, 517
BmsI	GCATC	4 cut(s)	413, 879, 1433, 1834
BpiI	GAAGAC	2 cut(s)	1422, 1892
Bpu10I	CCTNAGC	1 cut(s)	1103
Bpu1102I	GCTNAGC	2 cut(s)	602, 934
Bpu14I	TTCGAA	2 cut(s)	1212, 2061
BpuEI	CTTGAG	1 cut(s)	1060
BpuMI	CCSGG	4 cut(s)	93, 398, 468, 517
BsaHI	GRCGYC	3 cut(s)	63, 999, 2019
BsaI	GGTCTC	2 cut(s)	482, 1150
BsaJI	CCNNGG	5 cut(s)	22, 262, 516, 1643, 1862
BsaWI	WCCGGW	5 cut(s)	560, 1569, 1580, 1928, 2110
Bsc4I	CCNNNNNNNGG	6 cut(s)	473, 501, 517, 689, 1129, 1166
Bse118I	RCCGGY	1 cut(s)	882
Bse1I	ACTGG	2 cut(s)	1276, 1576
Bse3DI	GCAATG	3 cut(s)	1417, 1723, 1882
BseAI	TCCGGA	3 cut(s)	1569, 1580, 1928
BseBI	CCWGG	1 cut(s)	485
BseDI	CCNNGG	5 cut(s)	22, 262, 516, 1643, 1862
BseGI	GGATG	5 cut(s)	158, 214, 404, 672, 1519
BseLI	CCNNNNNNNGG	6 cut(s)	473, 501, 517, 689, 1129, 1166
BseMI	GCAATG	3 cut(s)	1417, 1723, 1882
BseNI	ACTGG	2 cut(s)	1276, 1576
BseRI	GAGGAG	5 cut(s)	43, 445, 1358, 1657, 2028
BseX3I	CGGCCG	1 cut(s)	399
BseYI	CCCAGC	1 cut(s)	1975
Bsh1236I	CGCG	4 cut(s)	236, 377, 412, 1200
Bsh1285I	CGRYCG	1 cut(s)	402
BshFI	GGCC	5 cut(s)	8, 401, 438, 740, 759
BshNI	GGYRCC	3 cut(s)	62, 987, 2018
BsiEI	CGRYCG	1 cut(s)	402
BsiHKAI	GWGCWC	4 cut(s)	608, 797, 1652, 1936
BslFI	GGGAC	3 cut(s)	494, 1667, 1687
BslI	CCNNNNNNNGG	6 cut(s)	473, 501, 517, 689, 1129, 1166
BsmAI	GTCTC	5 cut(s)	455, 482, 738, 1150, 1888
BsmBI	CGTCTC	1 cut(s)	738
BsmFI	GGGAC	3 cut(s)	494, 1667, 1687
BsmI	GAATGC	1 cut(s)	2057
BsnI	GGCC	5 cut(s)	8, 401, 438, 740, 759
Bso31I	GGTCTC	2 cut(s)	482, 1150
Bsp119I	TTCGAA	2 cut(s)	1212, 2061
Bsp1286I	GDGCHC	5 cut(s)	608, 797, 1120, 1652, 1936
Bsp13I	TCCGGA	3 cut(s)	1569, 1580, 1928
Bsp143I	GATC	4 cut(s)	1019, 1181, 1385, 2008
Bsp1720I	GCTNAGC	2 cut(s)	602, 934
BspANI	GGCC	5 cut(s)	8, 401, 438, 740, 759
BspEI	TCCGGA	3 cut(s)	1569, 1580, 1928
BspFNI	CGCG	4 cut(s)	236, 377, 412, 1200
BspHI	TCATGA	1 cut(s)	84
BspLI	GGNNCC	5 cut(s)	64, 510, 989, 1574, 2020
BspMI	ACCTGC	1 cut(s)	1827
BspPI	GGATC	2 cut(s)	1014, 1393
BspQI	GCTCTTC	1 cut(s)	1214
BspT104I	TTCGAA	2 cut(s)	1212, 2061
BspT107I	GGYRCC	3 cut(s)	62, 987, 2018
BspTNI	GGTCTC	2 cut(s)	482, 1150
BsrDI	GCAATG	3 cut(s)	1417, 1723, 1882
BsrFI	RCCGGY	1 cut(s)	882
BsrI	ACTGG	2 cut(s)	1276, 1576
BssAI	RCCGGY	1 cut(s)	882
BssECI	CCNNGG	5 cut(s)	22, 262, 516, 1643, 1862
BssMI	GATC	4 cut(s)	1019, 1181, 1385, 2008
BssNI	GRCGYC	3 cut(s)	63, 999, 2019
BssSI	CACGAG	1 cut(s)	1314
BssT1I	CCWWGG	2 cut(s)	1643, 1862
Bst2BI	CACGAG	1 cut(s)	1314
Bst2UI	CCWGG	1 cut(s)	485
Bst4CI	ACNGT	6 cut(s)	26, 293, 749, 1128, 1676, 1910
Bst6I	CTCTTC	2 cut(s)	1214, 1978
BstACI	GRCGYC	3 cut(s)	63, 999, 2019
BstAPI	GCANNNNNTGC	2 cut(s)	595, 634
BstBI	TTCGAA	2 cut(s)	1212, 2061
BstC8I	GCNNGC	5 cut(s)	345, 596, 780, 918, 1260
BstDSI	CCRYGG	1 cut(s)	22
BstF5I	GGATG	5 cut(s)	158, 214, 404, 672, 1519
BstFNI	CGCG	4 cut(s)	236, 377, 412, 1200
BstH2I	RGCGCY	2 cut(s)	66, 2022
BstHHI	GCGC	6 cut(s)	65, 238, 379, 628, 1202, 2021
BstKTI	GATC	4 cut(s)	1022, 1184, 1388, 2011
BstMAI	GTCTC	5 cut(s)	455, 482, 738, 1150, 1888
BstMBI	GATC	4 cut(s)	1019, 1181, 1385, 2008
BstMCI	CGRYCG	1 cut(s)	402
BstMWI	GCNNNNNNNGC	7 cut(s)	145, 344, 595, 634, 1108, 1330, 1833
BstNI	CCWGG	1 cut(s)	485
BstNSI	RCATGY	3 cut(s)	347, 847, 1258
BstSCI	CCNGG	5 cut(s)	91, 396, 466, 483, 515
BstUI	CGCG	4 cut(s)	236, 377, 412, 1200
BstV2I	GAAGAC	2 cut(s)	1422, 1892
BstX2I	RGATCY	1 cut(s)	1181
BstXI	CCANNNNNNTGG	1 cut(s)	1564
BstYI	RGATCY	1 cut(s)	1181
BstZI	CGGCCG	1 cut(s)	399
BsuI	GTATCC	1 cut(s)	278
BsuRI	GGCC	5 cut(s)	8, 401, 438, 740, 759
BtgI	CCRYGG	1 cut(s)	22
BtsCI	GGATG	5 cut(s)	158, 214, 404, 672, 1519
BtsI	GCAGTG	3 cut(s)	795, 948, 959
BtsIMutI	CAGTG	6 cut(s)	795, 948, 959, 1449, 1681, 1906
BveI	ACCTGC	1 cut(s)	1827
Cac8I	GCNNGC	5 cut(s)	345, 596, 780, 918, 1260
CaiI	CAGNNNCTG	2 cut(s)	439, 634
CciI	TCATGA	1 cut(s)	84
CfoI	GCGC	6 cut(s)	65, 238, 379, 628, 1202, 2021
Cfr10I	RCCGGY	1 cut(s)	882
Cfr13I	GGNCC	5 cut(s)	436, 508, 859, 1138, 1567
CseI	GACGC	2 cut(s)	286, 1007
Csp6I	GTAC	3 cut(s)	373, 613, 1351
CspCI	CAANNNNNGTGG	2 cut(s)	157, 192
CviQI	GTAC	3 cut(s)	373, 613, 1351
DinI	GGCGCC	2 cut(s)	64, 2020
DpnI	GATC	4 cut(s)	1021, 1183, 1387, 2010
DpnII	GATC	4 cut(s)	1019, 1181, 1385, 2008
EaeI	YGGCCR	1 cut(s)	399
EagI	CGGCCG	1 cut(s)	399
Eam1104I	CTCTTC	2 cut(s)	1214, 1978
EarI	CTCTTC	2 cut(s)	1214, 1978
EciI	GGCGGA	5 cut(s)	151, 325, 484, 749, 1012
Ecl136II	GAGCTC	2 cut(s)	606, 1934
EclXI	CGGCCG	1 cut(s)	399
Eco130I	CCWWGG	2 cut(s)	1643, 1862
Eco24I	GRGCYC	3 cut(s)	608, 1120, 1936
Eco31I	GGTCTC	2 cut(s)	482, 1150
Eco47I	GGWCC	4 cut(s)	508, 859, 1138, 1567
Eco52I	CGGCCG	1 cut(s)	399
Eco53kI	GAGCTC	2 cut(s)	606, 1934
Eco57I	CTGAAG	2 cut(s)	1013, 2016
EcoICRI	GAGCTC	2 cut(s)	606, 1934
EcoO109I	RGGNCCY	2 cut(s)	436, 508
EcoRI	GAATTC	3 cut(s)	360, 547, 1492
EcoRII	CCWGG	1 cut(s)	483
EcoT14I	CCWWGG	2 cut(s)	1643, 1862
EcoT38I	GRGCYC	3 cut(s)	608, 1120, 1936
EgeI	GGCGCC	2 cut(s)	64, 2020
EheI	GGCGCC	2 cut(s)	64, 2020
ErhI	CCWWGG	2 cut(s)	1643, 1862
Esp3I	CGTCTC	1 cut(s)	738
FaqI	GGGAC	3 cut(s)	494, 1667, 1687
FauI	CCCGC	1 cut(s)	279
FbaI	TGATCA	1 cut(s)	2008
FblI	GTMKAC	1 cut(s)	1989
FokI	GGATG	5 cut(s)	145, 201, 391, 679, 1506
FriOI	GRGCYC	3 cut(s)	608, 1120, 1936
FspBI	CTAG	3 cut(s)	1281, 1644, 1895
GlaI	GCGC	6 cut(s)	64, 237, 378, 627, 1201, 2020
GsaI	CCCAGC	1 cut(s)	1979
HaeII	RGCGCY	2 cut(s)	66, 2022
HaeIII	GGCC	5 cut(s)	8, 401, 438, 740, 759
HgaI	GACGC	2 cut(s)	286, 1007
HhaI	GCGC	6 cut(s)	65, 238, 379, 628, 1202, 2021
Hin1I	GRCGYC	3 cut(s)	63, 999, 2019
Hin6I	GCGC	6 cut(s)	63, 236, 377, 626, 1200, 2019
HinP1I	GCGC	6 cut(s)	63, 236, 377, 626, 1200, 2019
HincII	GTYRAC	1 cut(s)	1093
HindII	GTYRAC	1 cut(s)	1093
HphI	GGTGA	6 cut(s)	11, 910, 1510, 1723, 1928, 2009
Hpy166II	GTNNAC	5 cut(s)	652, 859, 1093, 1434, 1990
Hpy188III	TCNNGA	6 cut(s)	85, 658, 1570, 1581, 1741, 1929
Hpy8I	GTNNAC	5 cut(s)	652, 859, 1093, 1434, 1990
Hpy99I	CGWCG	2 cut(s)	556, 659
HpyCH4III	ACNGT	6 cut(s)	26, 293, 749, 1128, 1676, 1910
HpyCH4IV	ACGT	2 cut(s)	99, 654
HpyF10VI	GCNNNNNNNGC	7 cut(s)	145, 344, 595, 634, 1108, 1330, 1833
HpySE526I	ACGT	2 cut(s)	99, 654
Hsp92I	GRCGYC	3 cut(s)	63, 999, 2019
HspAI	GCGC	6 cut(s)	63, 236, 377, 626, 1200, 2019
KasI	GGCGCC	2 cut(s)	62, 2018
Kpn2I	TCCGGA	3 cut(s)	1569, 1580, 1928
Ksp22I	TGATCA	1 cut(s)	2008
Kzo9I	GATC	4 cut(s)	1019, 1181, 1385, 2008
LguI	GCTCTTC	1 cut(s)	1214
LmnI	GCTCC	7 cut(s)	305, 631, 1369, 1444, 1647, 1931, 2041
LweI	GCATC	4 cut(s)	413, 879, 1433, 1834
MaeI	CTAG	3 cut(s)	1281, 1644, 1895
MaeII	ACGT	2 cut(s)	99, 654
MaeIII	GTNAC	5 cut(s)	95, 293, 413, 565, 2106
MalI	GATC	4 cut(s)	1021, 1183, 1387, 2010
MboI	GATC	4 cut(s)	1019, 1181, 1385, 2008
MfeI	CAATTG	3 cut(s)	390, 1297, 2102
MflI	RGATCY	1 cut(s)	1181
MhlI	GDGCHC	5 cut(s)	608, 797, 1120, 1652, 1936
MluI	ACGCGT	1 cut(s)	410
Mly113I	GGCGCC	2 cut(s)	63, 2019
MlyI	GAGTC	7 cut(s)	361, 457, 731, 1269, 1294, 1412, 1709
MmeI	TCCRAC	3 cut(s)	135, 1036, 1147
MroI	TCCGGA	3 cut(s)	1569, 1580, 1928
MroXI	GAANNNNTTC	1 cut(s)	525
MslI	CAYNNNNRTG	2 cut(s)	24, 1562
MspA1I	CMGCKG	5 cut(s)	274, 719, 923, 1102, 1975
MspR9I	CCNGG	5 cut(s)	93, 398, 468, 485, 517
MunI	CAATTG	3 cut(s)	390, 1297, 2102
Mva1269I	GAATGC	1 cut(s)	2057
MvaI	CCWGG	1 cut(s)	485
MvnI	CGCG	4 cut(s)	236, 377, 412, 1200
MwoI	GCNNNNNNNGC	7 cut(s)	145, 344, 595, 634, 1108, 1330, 1833
NarI	GGCGCC	2 cut(s)	63, 2019
NciI	CCSGG	4 cut(s)	93, 398, 468, 517
NdeII	GATC	4 cut(s)	1019, 1181, 1385, 2008
NlaIV	GGNNCC	5 cut(s)	64, 510, 989, 1574, 2020
NmeAIII	GCCGAG	2 cut(s)	381, 523
NmuCI	GTSAC	2 cut(s)	413, 565
NspI	RCATGY	3 cut(s)	347, 847, 1258
NspV	TTCGAA	2 cut(s)	1212, 2061
OliI	CACNNNNGTG	1 cut(s)	24
PaeI	GCATGC	1 cut(s)	347
PagI	TCATGA	1 cut(s)	84
PciSI	GCTCTTC	1 cut(s)	1214
PcsI	WCGNNNNNNNCGW	2 cut(s)	542, 2067
PctI	GAATGC	1 cut(s)	2057
PdmI	GAANNNNTTC	1 cut(s)	525
PfeI	GAWTC	4 cut(s)	88, 1241, 1501, 1584
PflMI	CCANNNNNTGG	1 cut(s)	1129
PfoI	TCCNGGA	1 cut(s)	483
PleI	GAGTC	7 cut(s)	361, 456, 730, 1269, 1293, 1412, 1708
PluTI	GGCGCC	2 cut(s)	66, 2022
PpsI	GAGTC	7 cut(s)	361, 456, 730, 1269, 1293, 1412, 1708
PpuMI	RGGWCCY	1 cut(s)	508
PsiI	TTATAA	1 cut(s)	1307
Psp124BI	GAGCTC	2 cut(s)	608, 1936
Psp5II	RGGWCCY	1 cut(s)	508
Psp6I	CCWGG	1 cut(s)	483
PspFI	CCCAGC	1 cut(s)	1975
PspGI	CCWGG	1 cut(s)	483
PspN4I	GGNNCC	5 cut(s)	64, 510, 989, 1574, 2020
PspPI	GGNCC	5 cut(s)	436, 508, 859, 1138, 1567
PspPPI	RGGWCCY	1 cut(s)	508
PstNI	CAGNNNCTG	2 cut(s)	439, 634
PsuI	RGATCY	1 cut(s)	1181
PvuII	CAGCTG	4 cut(s)	719, 923, 1102, 1975
RsaI	GTAC	3 cut(s)	374, 614, 1352
RsaNI	GTAC	3 cut(s)	373, 613, 1351
RseI	CAYNNNNRTG	2 cut(s)	24, 1562
SacI	GAGCTC	2 cut(s)	608, 1936
SapI	GCTCTTC	1 cut(s)	1214
Sau3AI	GATC	4 cut(s)	1019, 1181, 1385, 2008
Sau96I	GGNCC	5 cut(s)	436, 508, 859, 1138, 1567
ScaI	AGTACT	1 cut(s)	614
SchI	GAGTC	7 cut(s)	361, 457, 731, 1269, 1294, 1412, 1709
ScrFI	CCNGG	5 cut(s)	93, 398, 468, 485, 517
SduI	GDGCHC	5 cut(s)	608, 797, 1120, 1652, 1936
SfaNI	GCATC	4 cut(s)	413, 879, 1433, 1834
SfoI	GGCGCC	2 cut(s)	64, 2020
SfuI	TTCGAA	2 cut(s)	1212, 2061
SinI	GGWCC	4 cut(s)	508, 859, 1138, 1567
SmiMI	CAYNNNNRTG	2 cut(s)	24, 1562
SmlI	CTYRAG	1 cut(s)	1075
SmoI	CTYRAG	1 cut(s)	1075
SphI	GCATGC	1 cut(s)	347
SspDI	GGCGCC	2 cut(s)	62, 2018
SspMI	CTAG	3 cut(s)	1281, 1644, 1895
SstI	GAGCTC	2 cut(s)	608, 1936
StyD4I	CCNGG	5 cut(s)	91, 396, 466, 483, 515
StyI	CCWWGG	2 cut(s)	1643, 1862
TaaI	ACNGT	6 cut(s)	26, 293, 749, 1128, 1676, 1910
TaiI	ACGT	2 cut(s)	102, 657
TatI	WGTACW	2 cut(s)	612, 1350
TauI	GCSGC	6 cut(s)	8, 167, 404, 626, 716, 785
TfiI	GAWTC	4 cut(s)	88, 1241, 1501, 1584
TscAI	CASTG	6 cut(s)	802, 955, 966, 1456, 1681, 1913
TseFI	GTSAC	2 cut(s)	413, 565
Tsp45I	GTSAC	2 cut(s)	413, 565
TspRI	CASTG	6 cut(s)	802, 955, 966, 1456, 1681, 1913
Van91I	CCANNNNNTGG	1 cut(s)	1129
VpaK11BI	GGWCC	4 cut(s)	508, 859, 1138, 1567
XapI	RAATTY	7 cut(s)	360, 547, 813, 1014, 1492, 1736, 1804
XceI	RCATGY	3 cut(s)	347, 847, 1258
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1033
XmaJI	CCTAGG	1 cut(s)	1643
XmiI	GTMKAC	1 cut(s)	1989
XmnI	GAANNNNTTC	1 cut(s)	525
XspI	CTAG	3 cut(s)	1281, 1644, 1895
ZrmI	AGTACT	1 cut(s)	614

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.