Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0004819

Physical Location & Seq

Genomic Coordinates Forward (+)

3322781 .. 3325576

Gene Structure 2796 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g03480.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGGCGACCTACTTTCATCACCACCGCGGCAACTCATCGGAAATCCAAGCCTCCTCCGACAGTGCCTTACAAACCCTCGTTCTCATGAATCCCGCTTATGTCCCTTACTCCGACACTCCACCACCACCACAGCAACAACAACAACAGCCTCAAACCCCACCCGCCGCCACCAACCTTGTTTTTCTCAACTCAGCCGCCAATTCCCTCACTCACCACCCCTCAACACTCTCCCACGCGCCGCCCTCCCACCACCAGCAATTCGTCGGCATCCCGCTGACGCAAGACCCCAACAGCAACAGCTCCCAATCCATGCACCACCCCCATCATGACATCTCCACACTGCATGCGTTCATGCCGAGAATTCAGACTCAGTACGCGCTTTGGAACTCAATTGACCCGACCGCGGCCGCGCGTGACACCCCACGCGCTCAGCAGGGCCTGTCTTTGAGTCTCTCCTCGCAGCAGCCGGGTTTTGGGTCGTTCCAGGGAGGCGCCACCGAGAGGGAGGTCCCGTCCGGGGAAGATATTCGGGTTTCAAGCGGGTCAAATTCGTCGGCTTCTGGTGTGACGAATGGGGTTTCGGGTATGCAGAGCGTGCTGCTAAGCTCCAAATACTTGAAGGCGGCGCAGGAGCTGCTCGATGAGGTTGTGAACGTTGGGAATGGGATGAGGACTGAGCTGCCAAAGAAGGGTAATGGGCAGCAGAGTAAAGCGGCGGCTGAGTCGGCTGCCGGGGACGGTTTAGTAGGCGGTGAAGGGAGTGGAAAACGTGCGTCTGAGTTGAGCACTGCTGAGAGGCAGGAAATTCAGATGAAGAAGGGAAAGCTAATCAACATGCTTGATGAGGTTGACCAAAGGTACAGGCAATACCACCGGCAGATGCAAATGGTGATTTCATCATTCGAGCAAGCAGCTGGAATTGGCTCAGCAAGAACATACACTGCTCTGGCACTGCAAACAATCTCAAAGCAATTCAGGTGCCTGAAGGACTCCATAACCAACCAAATTCGAACCGCAAACAAGAGCTTGGGAGAAGAAGATAGCGTTGGAGGCAAGATTGAAGGCTCAAGGCTCAAATATGTTGACCATCAGCTGAGGCAGCAAAGGGCTCTCCAACAATTGGGAATGATCCAGCACAATGCTTGGAGACCACAACGAGGATTGCCCGAAAGATCTGTTTCCGTTCTCCGCGCTTGGCTCTTCGAACACTTCCTTCACCCATATCCGAAGGATTCAGACAAGCACATGCTTGCAAAACAGACTGGACTTACTAGGAGTCAGGTTTCCAATTGGTTTATAAACGCTCGGGTCCGGCTGTGGAAGCCAATGGTGGAGGAAATGTACATGGAGGAAGTGAAGGAGCAAGAGCAGAATGGATCATCTGAGAAAATGAGCAAGAGCAATGAGGACTCTGCATCAAAGTCCACAGCTCCACAAGACGCTGAGAACCAAACAACAAGCACTTTCAACTTCAAACAAGAGAATTCGGTGAACCACAATCTCGCTGCTCATCCATCAATTTCGATTTCCCAAGCCTCAACATCGCCCACAAACATGGTTCGGAACCAGTCCGGATTCACTCTCATTGGGTCATCAGAACTCGATGGGATTACACAAGCTAGTCCAAAGAAGCCTAGGAGCACCGAAATTATGCACTCCTCAAATGGTAGTGTCCCATGTATGAATATTGAGGCCCAAGAGGTGAACAATGAGCAAGTTTCTATGAAATTCGGGGACGAGAGGCAGGGCAGAGATGGCTACTCTTTCATGGGAGGGCAGACTAATTTCATCGGAAATTTTGGGCAATACCCGATTGGGGAAATTGGCAGGTTTGATGCAGACCAATTCGCACCAAGGTTCTCGGGCAACAGTGTCTCTCTCACTCTAGGTCTTCCTCACTGCGAAAACCTCTCCATGTCCGGAGCTCACCATCATCAAACTTTTCTCCCAAACCAAAACATTCAGCTGGGGAGAAGAGTAGACACTGGTGAAACAAATGATCAGTTTGGTGCCATAAACACTTCAGCTCCTCACTCTTCCGCTGCTGCATTCGAAAACATCGACATTCAGAGCCGAAAAAGGTTCGTAGCCCAATTGTTACCAGACTTTGTGGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009553 GO:0009559 GO:0009561 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009628 GO:0009639 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009987 GO:0010033 GO:0010197 GO:0010201 GO:0010218 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042802 GO:0042803 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046982 GO:0046983 GO:0048229 GO:0048284 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

706

Amino Acids

77.34

Weight (kDa)

6.72

Isoelectric Point (pI)

48.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004819)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35940 AT2G35940 AT2G35940
fragaria_vesca	FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350 FvH4_6g20350
malus_domestica	MD12G1040700.v1.1 MD14G1039700.v1.1
prunus_persica	Prupe.7G094300_v2.0.a1
pyrus_communis	pycom12g03480 pycom14g03390 pycom14g03400
rosa_chinensis	RchiOBHm_Chr3g0475961
rosa_laevigata	RLG00000023795
rosa_multiflora	Rmu_sc0000585.1_g000030
rosa_roxburghii	Rroxscaffold_6G00405580
rosa_rugosa	Rorug03G0152500 Rorug03G0152600 Rorug03G0152700 Rorug03G0152700
rosa_samantha	Rh3AG203400 Rh3BG233000 Rh3CG228700 Rh3DG228900
rosa_wichuraiana	Rw3G018490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1298
Acc36I	ACCTGC	1 cut(s)	1818
AccB1I	GGYRCC	3 cut(s)	491, 978, 2009
AccB7I	CCANNNNNTGG	1 cut(s)	1120
AccI	GTMKAC	1 cut(s)	1980
AccII	CGCG	8 cut(s)	27, 236, 377, 404, 410, 412, 426, 1191
AccIII	TCCGGA	2 cut(s)	1571, 1919
AclI	AACGTT	1 cut(s)	654
AclWI	GGATC	2 cut(s)	1123, 1384
AcoI	YGGCCR	1 cut(s)	405
AcsI	RAATTY	7 cut(s)	360, 547, 804, 1005, 1483, 1727, 1795
AcuI	CTGAAG	2 cut(s)	1004, 2007
AcyI	GRCGYC	1 cut(s)	492
AfaI	GTAC	3 cut(s)	374, 860, 1343
AfiI	CCNNNNNNNGG	8 cut(s)	403, 473, 501, 517, 689, 1120, 1157, 1816
AgsI	TTSAA	5 cut(s)	537, 619, 1061, 1468, 1474
AjnI	CCWGG	1 cut(s)	483
AjuI	GAANNNNNNNTTGG	2 cut(s)	1029, 1061
Alw21I	GWGCWC	3 cut(s)	788, 1643, 1927
Alw26I	GTCTC	3 cut(s)	455, 1141, 1879
AlwI	GGATC	2 cut(s)	1123, 1384
AlwNI	CAGNNNCTG	2 cut(s)	439, 634
Ama87I	CYCGRG	2 cut(s)	1305, 1861
Aor13HI	TCCGGA	2 cut(s)	1571, 1919
AoxI	GGCC	3 cut(s)	405, 436, 1692
ApoI	RAATTY	7 cut(s)	360, 547, 804, 1005, 1483, 1727, 1795
Asp700I	GAANNNNTTC	1 cut(s)	525
AspA2I	CCTAGG	1 cut(s)	1634
AspLEI	GCGC	7 cut(s)	238, 379, 412, 428, 494, 628, 1193
AspS9I	GGNCC	4 cut(s)	436, 508, 1309, 1693
AsuC2I	CCSGG	3 cut(s)	468, 517, 733
AsuHPI	GGTGA	9 cut(s)	11, 203, 764, 901, 1208, 1501, 1714, 1919, 2000
AsuII	TTCGAA	3 cut(s)	1009, 1203, 2052
AvaI	CYCGRG	2 cut(s)	1305, 1861
AvaII	GGWCC	2 cut(s)	508, 1309
AvrII	CCTAGG	1 cut(s)	1634
BanI	GGYRCC	3 cut(s)	491, 978, 2009
BanII	GRGCYC	2 cut(s)	1111, 1927
BbsI	GAAGAC	1 cut(s)	1883
Bbv12I	GWGCWC	3 cut(s)	788, 1643, 1927
BbvCI	CCTCAGC	1 cut(s)	1094
BccI	CCATC	6 cut(s)	330, 1095, 1522, 1598, 1748, 1938
BciT130I	CCWGG	1 cut(s)	485
BclI	TGATCA	1 cut(s)	1999
BcnI	CCSGG	3 cut(s)	468, 517, 733
BcoDI	GTCTC	3 cut(s)	455, 1141, 1879
BfaI	CTAG	4 cut(s)	1272, 1620, 1635, 1886
BfoI	RGCGCY	1 cut(s)	495
BfuAI	ACCTGC	1 cut(s)	1818
BglII	AGATCT	1 cut(s)	1172
BlnI	CCTAGG	1 cut(s)	1634
BlpI	GCTNAGC	3 cut(s)	429, 602, 925
Bme1390I	CCNGG	4 cut(s)	468, 485, 517, 733
Bme18I	GGWCC	2 cut(s)	508, 1309
BmeT110I	CYCGRG	2 cut(s)	1305, 1861
BmgT120I	GGNCC	4 cut(s)	436, 508, 1309, 1693
BmiI	GGNNCC	6 cut(s)	493, 510, 980, 1310, 1565, 2011
BmrFI	CCNGG	4 cut(s)	468, 485, 517, 733
BmsI	GCATC	4 cut(s)	276, 870, 1424, 1825
BpiI	GAAGAC	1 cut(s)	1883
Bpu10I	CCTNAGC	1 cut(s)	1094
Bpu1102I	GCTNAGC	3 cut(s)	429, 602, 925
Bpu14I	TTCGAA	3 cut(s)	1009, 1203, 2052
BpuEI	CTTGAG	1 cut(s)	1051
BpuMI	CCSGG	3 cut(s)	468, 517, 733
BsaHI	GRCGYC	1 cut(s)	492
BsaI	GGTCTC	1 cut(s)	1141
BsaJI	CCNNGG	7 cut(s)	25, 402, 484, 516, 732, 1634, 1853
BsaWI	WCCGGW	2 cut(s)	1571, 1919
BsaXI	ACNNNNNCTCC	6 cut(s)	497, 527, 1325, 1355, 2011, 2041
Bsc4I	CCNNNNNNNGG	8 cut(s)	403, 473, 501, 517, 689, 1120, 1157, 1816
Bse118I	RCCGGY	1 cut(s)	873
Bse1I	ACTGG	3 cut(s)	1267, 1567, 1990
Bse3DI	GCAATG	1 cut(s)	1408
BseAI	TCCGGA	2 cut(s)	1571, 1919
BseBI	CCWGG	1 cut(s)	485
BseDI	CCNNGG	7 cut(s)	25, 402, 484, 516, 732, 1634, 1853
BseGI	GGATG	3 cut(s)	267, 672, 1510
BseLI	CCNNNNNNNGG	8 cut(s)	403, 473, 501, 517, 689, 1120, 1157, 1816
BseMI	GCAATG	1 cut(s)	1408
BseNI	ACTGG	3 cut(s)	1267, 1567, 1990
BseRI	GAGGAG	4 cut(s)	43, 445, 1648, 2019
BseX3I	CGGCCG	1 cut(s)	405
BseYI	CCCAGC	1 cut(s)	1966
Bsh1236I	CGCG	8 cut(s)	27, 236, 377, 404, 410, 412, 426, 1191
Bsh1285I	CGRYCG	2 cut(s)	402, 408
BshFI	GGCC	3 cut(s)	407, 438, 1694
BshNI	GGYRCC	3 cut(s)	491, 978, 2009
BsiEI	CGRYCG	2 cut(s)	402, 408
BsiHKAI	GWGCWC	3 cut(s)	788, 1643, 1927
BsiHKCI	CYCGRG	2 cut(s)	1305, 1861
BsiSI	CCGG	7 cut(s)	467, 516, 732, 874, 1312, 1572, 1920
BslFI	GGGAC	5 cut(s)	86, 494, 749, 1658, 1748
BslI	CCNNNNNNNGG	8 cut(s)	403, 473, 501, 517, 689, 1120, 1157, 1816
BsmAI	GTCTC	3 cut(s)	455, 1141, 1879
BsmFI	GGGAC	5 cut(s)	86, 494, 749, 1658, 1748
BsmI	GAATGC	1 cut(s)	2048
BsnI	GGCC	3 cut(s)	407, 438, 1694
Bso31I	GGTCTC	1 cut(s)	1141
BsoBI	CYCGRG	2 cut(s)	1305, 1861
Bsp119I	TTCGAA	3 cut(s)	1009, 1203, 2052
Bsp1286I	GDGCHC	4 cut(s)	788, 1111, 1643, 1927
Bsp13I	TCCGGA	2 cut(s)	1571, 1919
Bsp1407I	TGTACA	1 cut(s)	1341
Bsp143I	GATC	4 cut(s)	1128, 1172, 1376, 1999
Bsp1720I	GCTNAGC	3 cut(s)	429, 602, 925
BspANI	GGCC	3 cut(s)	407, 438, 1694
BspEI	TCCGGA	2 cut(s)	1571, 1919
BspFNI	CGCG	8 cut(s)	27, 236, 377, 404, 410, 412, 426, 1191
BspHI	TCATGA	2 cut(s)	84, 325
BspLI	GGNNCC	6 cut(s)	493, 510, 980, 1310, 1565, 2011
BspMI	ACCTGC	1 cut(s)	1818
BspPI	GGATC	2 cut(s)	1123, 1384
BspQI	GCTCTTC	1 cut(s)	1205
BspT104I	TTCGAA	3 cut(s)	1009, 1203, 2052
BspT107I	GGYRCC	3 cut(s)	491, 978, 2009
BspTNI	GGTCTC	1 cut(s)	1141
BsrDI	GCAATG	1 cut(s)	1408
BsrFI	RCCGGY	1 cut(s)	873
BsrGI	TGTACA	1 cut(s)	1341
BsrI	ACTGG	3 cut(s)	1267, 1567, 1990
BssAI	RCCGGY	1 cut(s)	873
BssECI	CCNNGG	7 cut(s)	25, 402, 484, 516, 732, 1634, 1853
BssMI	GATC	4 cut(s)	1128, 1172, 1376, 1999
BssNI	GRCGYC	1 cut(s)	492
BssT1I	CCWWGG	2 cut(s)	1634, 1853
Bst2UI	CCWGG	1 cut(s)	485
Bst4CI	ACNGT	3 cut(s)	62, 740, 1871
Bst6I	CTCTTC	3 cut(s)	1205, 1969, 2041
BstACI	GRCGYC	1 cut(s)	492
BstAPI	GCANNNNNTGC	2 cut(s)	595, 634
BstAUI	TGTACA	1 cut(s)	1341
BstBI	TTCGAA	3 cut(s)	1009, 1203, 2052
BstC8I	GCNNGC	4 cut(s)	345, 596, 909, 1251
BstDSI	CCRYGG	2 cut(s)	25, 402
BstF5I	GGATG	3 cut(s)	267, 672, 1510
BstFNI	CGCG	8 cut(s)	27, 236, 377, 404, 410, 412, 426, 1191
BstH2I	RGCGCY	1 cut(s)	495
BstHHI	GCGC	7 cut(s)	238, 379, 412, 428, 494, 628, 1193
BstKTI	GATC	4 cut(s)	1131, 1175, 1379, 2002
BstMAI	GTCTC	3 cut(s)	455, 1141, 1879
BstMBI	GATC	4 cut(s)	1128, 1172, 1376, 1999
BstMCI	CGRYCG	2 cut(s)	402, 408
BstMWI	GCNNNNNNNGC	7 cut(s)	595, 634, 725, 1050, 1099, 1321, 1755
BstNI	CCWGG	1 cut(s)	485
BstNSI	RCATGY	3 cut(s)	347, 838, 1249
BstSCI	CCNGG	4 cut(s)	466, 483, 515, 731
BstUI	CGCG	8 cut(s)	27, 236, 377, 404, 410, 412, 426, 1191
BstV2I	GAAGAC	1 cut(s)	1883
BstX2I	RGATCY	1 cut(s)	1172
BstXI	CCANNNNNNTGG	1 cut(s)	1555
BstYI	RGATCY	1 cut(s)	1172
BstZI	CGGCCG	1 cut(s)	405
BsuRI	GGCC	3 cut(s)	407, 438, 1694
BtgI	CCRYGG	2 cut(s)	25, 402
BtgZI	GCGATG	1 cut(s)	1527
BtsCI	GGATG	3 cut(s)	267, 672, 1510
BtsI	GCAGTG	5 cut(s)	338, 786, 939, 950, 1897
BtsIMutI	CAGTG	8 cut(s)	67, 338, 786, 939, 950, 1876, 1897, 1983
BveI	ACCTGC	1 cut(s)	1818
Cac8I	GCNNGC	4 cut(s)	345, 596, 909, 1251
CaiI	CAGNNNCTG	2 cut(s)	439, 634
CciI	TCATGA	2 cut(s)	84, 325
CciNI	GCGGCCGC	1 cut(s)	405
CfoI	GCGC	7 cut(s)	238, 379, 412, 428, 494, 628, 1193
Cfr10I	RCCGGY	1 cut(s)	873
Cfr13I	GGNCC	4 cut(s)	436, 508, 1309, 1693
Cfr42I	CCGCGG	2 cut(s)	28, 405
CseI	GACGC	3 cut(s)	286, 762, 1448
Csp6I	GTAC	3 cut(s)	373, 859, 1342
CspCI	CAANNNNNGTGG	2 cut(s)	157, 192
CviQI	GTAC	3 cut(s)	373, 859, 1342
DinI	GGCGCC	1 cut(s)	493
DpnI	GATC	4 cut(s)	1130, 1174, 1378, 2001
DpnII	GATC	4 cut(s)	1128, 1172, 1376, 1999
EaeI	YGGCCR	1 cut(s)	405
EagI	CGGCCG	1 cut(s)	405
Eam1104I	CTCTTC	3 cut(s)	1205, 1969, 2041
EarI	CTCTTC	3 cut(s)	1205, 1969, 2041
Ecl136II	GAGCTC	1 cut(s)	1925
EclXI	CGGCCG	1 cut(s)	405
Eco130I	CCWWGG	2 cut(s)	1634, 1853
Eco24I	GRGCYC	2 cut(s)	1111, 1927
Eco31I	GGTCTC	1 cut(s)	1141
Eco47I	GGWCC	2 cut(s)	508, 1309
Eco52I	CGGCCG	1 cut(s)	405
Eco53kI	GAGCTC	1 cut(s)	1925
Eco57I	CTGAAG	2 cut(s)	1004, 2007
Eco88I	CYCGRG	2 cut(s)	1305, 1861
EcoICRI	GAGCTC	1 cut(s)	1925
EcoO109I	RGGNCCY	2 cut(s)	436, 508
EcoRI	GAATTC	2 cut(s)	360, 1483
EcoRII	CCWGG	1 cut(s)	483
EcoT14I	CCWWGG	2 cut(s)	1634, 1853
EcoT38I	GRGCYC	2 cut(s)	1111, 1927
EgeI	GGCGCC	1 cut(s)	493
EheI	GGCGCC	1 cut(s)	493
ErhI	CCWWGG	2 cut(s)	1634, 1853
FaqI	GGGAC	5 cut(s)	86, 494, 749, 1658, 1748
FauI	CCCGC	4 cut(s)	100, 169, 279, 533
FbaI	TGATCA	1 cut(s)	1999
FblI	GTMKAC	1 cut(s)	1980
FokI	GGATG	3 cut(s)	254, 679, 1497
FriOI	GRGCYC	2 cut(s)	1111, 1927
FspBI	CTAG	4 cut(s)	1272, 1620, 1635, 1886
GlaI	GCGC	7 cut(s)	237, 378, 411, 427, 493, 627, 1192
GsaI	CCCAGC	1 cut(s)	1970
HaeII	RGCGCY	1 cut(s)	495
HaeIII	GGCC	3 cut(s)	407, 438, 1694
HapII	CCGG	7 cut(s)	467, 516, 732, 874, 1312, 1572, 1920
HgaI	GACGC	3 cut(s)	286, 762, 1448
HhaI	GCGC	7 cut(s)	238, 379, 412, 428, 494, 628, 1193
Hin1I	GRCGYC	1 cut(s)	492
Hin6I	GCGC	7 cut(s)	236, 377, 410, 426, 492, 626, 1191
HinP1I	GCGC	7 cut(s)	236, 377, 410, 426, 492, 626, 1191
HincII	GTYRAC	2 cut(s)	850, 1084
HindII	GTYRAC	2 cut(s)	850, 1084
HinfI	GANTC	9 cut(s)	88, 367, 448, 722, 989, 1232, 1276, 1409, 1575
HpaII	CCGG	7 cut(s)	467, 516, 732, 874, 1312, 1572, 1920
HphI	GGTGA	9 cut(s)	11, 203, 764, 901, 1208, 1501, 1714, 1919, 2000
Hpy166II	GTNNAC	7 cut(s)	652, 850, 1084, 1425, 1492, 1705, 1981
Hpy188III	TCNNGA	4 cut(s)	85, 326, 1572, 1920
Hpy8I	GTNNAC	7 cut(s)	652, 850, 1084, 1425, 1492, 1705, 1981
Hpy99I	CGWCG	2 cut(s)	266, 556
HpyAV	CCTTC	9 cut(s)	613, 682, 749, 811, 979, 1055, 1222, 1223, 1351
HpyCH4III	ACNGT	3 cut(s)	62, 740, 1871
HpyCH4IV	ACGT	2 cut(s)	654, 769
HpyF10VI	GCNNNNNNNGC	7 cut(s)	595, 634, 725, 1050, 1099, 1321, 1755
HpySE526I	ACGT	2 cut(s)	654, 769
Hsp92I	GRCGYC	1 cut(s)	492
HspAI	GCGC	7 cut(s)	236, 377, 410, 426, 492, 626, 1191
KasI	GGCGCC	1 cut(s)	491
Kpn2I	TCCGGA	2 cut(s)	1571, 1919
Ksp22I	TGATCA	1 cut(s)	1999
KspI	CCGCGG	2 cut(s)	28, 405
Kzo9I	GATC	4 cut(s)	1128, 1172, 1376, 1999
LguI	GCTCTTC	1 cut(s)	1205
LmnI	GCTCC	8 cut(s)	305, 611, 631, 1360, 1435, 1638, 1922, 2032
LweI	GCATC	4 cut(s)	276, 870, 1424, 1825
MaeI	CTAG	4 cut(s)	1272, 1620, 1635, 1886
MaeII	ACGT	2 cut(s)	654, 769
MaeIII	GTNAC	3 cut(s)	413, 565, 2097
MalI	GATC	4 cut(s)	1130, 1174, 1378, 2001
MboI	GATC	4 cut(s)	1128, 1172, 1376, 1999
MboII	GAAGA	8 cut(s)	533, 826, 1046, 1049, 1192, 1883, 1986, 2028
MfeI	CAATTG	4 cut(s)	390, 1118, 1288, 2093
MflI	RGATCY	1 cut(s)	1172
MhlI	GDGCHC	4 cut(s)	788, 1111, 1643, 1927
Mly113I	GGCGCC	1 cut(s)	492
MlyI	GAGTC	6 cut(s)	361, 457, 731, 983, 1285, 1403
MmeI	TCCRAC	4 cut(s)	81, 135, 1027, 1138
MroI	TCCGGA	2 cut(s)	1571, 1919
MroXI	GAANNNNTTC	1 cut(s)	525
MslI	CAYNNNNRTG	1 cut(s)	1553
MspA1I	CMGCKG	7 cut(s)	27, 274, 404, 914, 1093, 1966, 2042
MspI	CCGG	7 cut(s)	467, 516, 732, 874, 1312, 1572, 1920
MspR9I	CCNGG	4 cut(s)	468, 485, 517, 733
MunI	CAATTG	4 cut(s)	390, 1118, 1288, 2093
Mva1269I	GAATGC	1 cut(s)	2048
MvaI	CCWGG	1 cut(s)	485
MvnI	CGCG	8 cut(s)	27, 236, 377, 404, 410, 412, 426, 1191
MwoI	GCNNNNNNNGC	7 cut(s)	595, 634, 725, 1050, 1099, 1321, 1755
NarI	GGCGCC	1 cut(s)	492
NciI	CCSGG	3 cut(s)	468, 517, 733
NdeII	GATC	4 cut(s)	1128, 1172, 1376, 1999
NlaIV	GGNNCC	6 cut(s)	493, 510, 980, 1310, 1565, 2011
NmeAIII	GCCGAG	1 cut(s)	381
NmuCI	GTSAC	2 cut(s)	413, 565
NotI	GCGGCCGC	1 cut(s)	405
NspI	RCATGY	3 cut(s)	347, 838, 1249
NspV	TTCGAA	3 cut(s)	1009, 1203, 2052
PaeI	GCATGC	1 cut(s)	347
PagI	TCATGA	2 cut(s)	84, 325
PciSI	GCTCTTC	1 cut(s)	1205
PcsI	WCGNNNNNNNCGW	1 cut(s)	2058
PctI	GAATGC	1 cut(s)	2048
PdmI	GAANNNNTTC	1 cut(s)	525
PfeI	GAWTC	3 cut(s)	88, 1232, 1575
PflMI	CCANNNNNTGG	1 cut(s)	1120
PleI	GAGTC	6 cut(s)	361, 456, 730, 983, 1284, 1403
PluTI	GGCGCC	1 cut(s)	495
PpsI	GAGTC	6 cut(s)	361, 456, 730, 983, 1284, 1403
PpuMI	RGGWCCY	1 cut(s)	508
PsiI	TTATAA	1 cut(s)	1298
Psp124BI	GAGCTC	1 cut(s)	1927
Psp1406I	AACGTT	1 cut(s)	654
Psp5II	RGGWCCY	1 cut(s)	508
Psp6I	CCWGG	1 cut(s)	483
PspFI	CCCAGC	1 cut(s)	1966
PspGI	CCWGG	1 cut(s)	483
PspN4I	GGNNCC	6 cut(s)	493, 510, 980, 1310, 1565, 2011
PspPI	GGNCC	4 cut(s)	436, 508, 1309, 1693
PspPPI	RGGWCCY	1 cut(s)	508
PstNI	CAGNNNCTG	2 cut(s)	439, 634
PsuI	RGATCY	1 cut(s)	1172
PvuII	CAGCTG	3 cut(s)	914, 1093, 1966
RsaI	GTAC	3 cut(s)	374, 860, 1343
RsaNI	GTAC	3 cut(s)	373, 859, 1342
RseI	CAYNNNNRTG	1 cut(s)	1553
SacI	GAGCTC	1 cut(s)	1927
SacII	CCGCGG	2 cut(s)	28, 405
SapI	GCTCTTC	1 cut(s)	1205
Sau3AI	GATC	4 cut(s)	1128, 1172, 1376, 1999
Sau96I	GGNCC	4 cut(s)	436, 508, 1309, 1693
SchI	GAGTC	6 cut(s)	361, 457, 731, 983, 1285, 1403
ScrFI	CCNGG	4 cut(s)	468, 485, 517, 733
SduI	GDGCHC	4 cut(s)	788, 1111, 1643, 1927
SfaNI	GCATC	4 cut(s)	276, 870, 1424, 1825
SfoI	GGCGCC	1 cut(s)	493
Sfr303I	CCGCGG	2 cut(s)	28, 405
SfuI	TTCGAA	3 cut(s)	1009, 1203, 2052
SgrBI	CCGCGG	2 cut(s)	28, 405
SinI	GGWCC	2 cut(s)	508, 1309
SmiMI	CAYNNNNRTG	1 cut(s)	1553
SmlI	CTYRAG	1 cut(s)	1066
SmoI	CTYRAG	1 cut(s)	1066
SphI	GCATGC	1 cut(s)	347
SspDI	GGCGCC	1 cut(s)	491
SspI	AATATT	1 cut(s)	1687
SspMI	CTAG	4 cut(s)	1272, 1620, 1635, 1886
SstI	GAGCTC	1 cut(s)	1927
StyD4I	CCNGG	4 cut(s)	466, 483, 515, 731
StyI	CCWWGG	2 cut(s)	1634, 1853
TaaI	ACNGT	3 cut(s)	62, 740, 1871
TaiI	ACGT	2 cut(s)	657, 772
TaqI	TCGA	8 cut(s)	639, 903, 1009, 1203, 1523, 1602, 2052, 2061
TatI	WGTACW	1 cut(s)	1341
TauI	GCSGC	9 cut(s)	30, 167, 197, 241, 407, 410, 626, 716, 719
TfiI	GAWTC	3 cut(s)	88, 1232, 1575
TscAI	CASTG	8 cut(s)	67, 345, 793, 946, 957, 1876, 1904, 1990
TseFI	GTSAC	2 cut(s)	413, 565
Tsp45I	GTSAC	2 cut(s)	413, 565
TspDTI	ATGAA	9 cut(s)	5, 101, 340, 827, 885, 1697, 1739, 1756, 1777
TspGWI	ACGGA	1 cut(s)	1171
TspRI	CASTG	8 cut(s)	67, 345, 793, 946, 957, 1876, 1904, 1990
Van91I	CCANNNNNTGG	1 cut(s)	1120
VpaK11BI	GGWCC	2 cut(s)	508, 1309
XapI	RAATTY	7 cut(s)	360, 547, 804, 1005, 1483, 1727, 1795
XceI	RCATGY	3 cut(s)	347, 838, 1249
XmaJI	CCTAGG	1 cut(s)	1634
XmiI	GTMKAC	1 cut(s)	1980
XmnI	GAANNNNTTC	1 cut(s)	525
XspI	CTAG	4 cut(s)	1272, 1620, 1635, 1886

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.