Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0005116

Physical Location & Seq

Genomic Coordinates Forward (+)

17968624 .. 17983085

Gene Structure 14462 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g23900.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2901 bp

ATGGCTAGTTCTACAAAAGCGATGGATCCAGCTTTTCAGGGAGCAGGTCAAAGAGTAGGGACTGAGATTTGGCGAATTGAAGATTTCCAGCCAGTTCCTTTGCCGAAATCTGAACATGGAAAATTCTATATGGGGGATTCTTATATTGTTTTGCAGACAACACAAAACAAAGGGGGCGCTTATCTGTTTGACATCCACTTCTGGATTGGGAAGGACACAAGTCAGGATGAAGCTGGGACAGCAGCTATTAAAACGGTTGAACTAGATACAGCTCTTGGAGGACGCGCCGTACAACATAGGGAAATTCAAGGCCATGAATCTGATAAATTTTTGTCCTACTTCAAACCATGTATTATACCATTGGAGGGTGGCGTTGCATCAGGATTTAAAAAGCCTGAGGAAGAAGAATTTGAAACTCGACTGTATATCTGCAGAGGAAAACGAGTTGTCAGAATGAAGCAGGTTCCTTTTGCGCGTTCGTCACTGAATCATGATGATGTGTTCATCCTGGACAGCAAGGATAAGATCTTTCAGTTCAATGGTGCGAATTCCAATATTCAGGAAAGGGCGAAGGCTTTGGAAGTGATTCAGTATTTGAAAGAAAAGTATCACAATGGGACATGTGATGTTGCAATAGTTGATGATGGGAAGCTAGACACAGAATCTGACTCTGGTGAGTTCTGGGTCCTAATGGGTGGTTTTGCTCCGATTAGCAAGAAGATTGCCAATGAAGATGATGTAATTCCTGAGTCCACTCCTGCTACACTTTATAGCATAACTGATGCTGAAGTGAAGATTGTAGAAGGTGAACTATCTAAATCCTTGCTTGAAAACAACAAATGTTACTTACTGGACTGTGGTTCCGAGGTATTTGTTTGGTTTGGTCGGTTGACACAAGTGGAGGACAGAAAAGCTGCTAGCCAAGCAGCTGAGGAATTTGTGTCTCATCAGAATAGACCAAAATCAACACGAATAACCCGGGTTATTCAAGGTTATGAGACACGTTCATTCAAGTCCAACTTTGATTCTTGGCCATTGGGAACAGCAACGTCTGGTTCTGAGGAGGGAAGAGGAAAAGTAGCAGCTCTGTTGAAGCAACAAGGTATTGGTGTAAAGGGCATGACAAAGGGTACTCCCGTAAATGAAGAGGTCCCACCTTTGCTTGAAGGAGGTGGAAAGATGGAGGTATGGTGCATCAATGGCAGTGCTAAAACACAAGTACCTAAGGAAGATATCGGCAAATTTTTTAGTGGAGATTGCTACATAATTCTTTATACCTACCACTCTGGTGACAGAAAAGATGACTACTTTCTGTGCTGTTGGTTCGGAAAAGATAGTATTGAGGAGGACCAGAAAACAGCTTCTCATTTGGCGACTTCCATGTCCAACTCACTGAAGGGAAGACCAGTTCAGGGTCACATATTCCAAGGTAAAGAGCCACCACAGTTTATTGCGCTCTTTCAGCCTATGGTTGTCCTCGAGGGTGGCCTGAGCTCTGGATATAAAAAATTTGTTGAGGAGAAAGGGTTAGCTGATGAAACGTACACAGCAGAATGTGTTGCACTCTTTCGGTTATCTGGAACCTCTATTCATAACAACAAAGCAGTGCAAGTTGATGCGGTGGCAACGTCATTGAACTCAAATGAGTGTTTCCTTCTGCAATCTGGCTCCTCAGTTTTTGCTTGGAATGGAAATCAATGCTCTGTTGAGCAGCAACAGTTAGCAGCAAAACTTGCAGAATTTCTGAAGCCAGGAGTTACTATAAAACATGCTAAAGAAGGAACTGAGAGCTCAACGTTCTGGCATGCCCTAGGAGGGAAACAAAATTACACCAGTAATAAAGTTGCTTCTGAAATTTCCAGAGATCCCCACCTATTCACATTCTCATTCAACAAAGGAAAGTTTCAGGTGGAAGAAATTTACAACTTTACTCAAGATGATCTACTGACAGAGGATATCCTTATACTTGACACACATGCTGAAGTCTTTGTTTGGGTTGGTCAATGTGTAGACTCGAAAGCAAAGCAAAATGCTTTTGAAATTGGCAAGAAATACATAGAGATGGCAGCATCTCTGGACGGGATGTCTCCTAATGTTCCATTGTACAAAGTTACTGAAGGAAATGAACCTCGCTTCTTTACAACATACTTTTCATGGGATCTTGCAAAAGCTAATGTTCAAGGAAACTCATTTCAGAAGAAGGTGTCCATTCTGTTTGGGGTTGGTCATGCTGTGGAGGACAAATCTGATGGGAACCAAGGAGGCCCAAGGCAAAGAGCTGAAGCCTTAGCGGCTCTATCATCTGCATTCAATTCTTCCCCTGGAAAATCACCCCCTACGGATAAGTCCAATGGGTCAAGCGAAGGAGGACCAAGGCAAAGAGCTGAAGCTTTAGCCGCTTTATCTTCTGCATTTAATTCATCTTCTGGAAGCAAATCATCTGTTCCCAAGCCTTCTTCAACAAGTCAAGGATCCCAAAGAGCTGCAGCAGTTGCTGCACTTTCAAATGTTCTTACAGCTGAAAAGACTAGGTTAACCCCTGATGCCTCTCCTGTGCAGAGTCCCCCTGCAGAAACTAGTGCTGAAACGAAAAGTGAAAAGGCGTATTCTGATATAGATCATGAAGTTCCTGAAGTTATAGATGCTGTTTCACCTTCTTCTGTATCAGAACCAAAGCAAGAGCAGGATGAGAATGGCAGTGAAAGCTGTCAAAGTACTTTCAGTTATGACCAACTGAGGGCTAAATCTGACAATCCAGTTACTGGAATTGATTTTAAGAGAAGAGAGGCCTATCTCTCTGATGAAGACTTTCAGACCATATTTGGGATGACGAAAGATGCTTTCTATCAACTCCCGAAATGGAAGCAAGACATGCAAAAGAAGAAAGCTGATTTGTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005884 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009987 GO:0010639 GO:0010817 GO:0015629 GO:0016043 GO:0022607 GO:0030029 GO:0030036 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0031333 GO:0032271 GO:0032272 GO:0032432 GO:0032535 GO:0032879 GO:0032956 GO:0032970 GO:0033043 GO:0040008 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043242 GO:0043244 GO:0043254 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044877 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051014 GO:0051015 GO:0051017 GO:0051049 GO:0051128 GO:0051129 GO:0051493 GO:0051494 GO:0051693 GO:0061572 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:2000012

KEGG Pathways

Metabolic & Signaling

ko04666 ko04810 ko05203 map04666 map04810 map05203

Pfam Domains

Protein Families

Gelsolin VHP

Protein Analysis

967

Amino Acids

106.2

Weight (kDa)

5.41

Isoelectric Point (pI)

41.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gelsolin	PF00626	30 - 111	1.3e-13	Gelsolin repeat
Gelsolin	PF00626	149 - 217	2e-11	Gelsolin repeat
Gelsolin	PF00626	267 - 337	4.3e-13	Gelsolin repeat
DUF7904	PF25480	402 - 488	2.1e-06	Domain of unknown function (DUF7904)
Gelsolin	PF00626	405 - 484	7.4e-09	Gelsolin repeat
Gelsolin	PF00626	532 - 601	1.3e-07	Gelsolin repeat
Gelsolin	PF00626	635 - 713	8.9e-06	Gelsolin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005116)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41740 AT2G41740 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410
fragaria_vesca	FvH4_6g23900 FvH4_6g23900 FvH4_6g23900 FvH4_6g23900
malus_domestica	MD12G1074400.v1.1 MD14G1072600.v1.1
prunus_persica	Prupe.7G059400_v2.0.a1
pyrus_communis	pycom12g06410 pycom14g06250
rosa_chinensis	RchiOBHm_Chr3g0482581
rosa_laevigata	RLG00000023341
rosa_roxburghii	Rroxscaffold_6G00399140
rosa_rugosa	Rorug03G0197000 Rorug03G0197100
rosa_samantha	Rh3AG248500 Rh3BG283600 Rh3DG277400
rosa_wichuraiana	Rw3G022440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1381
AbsI	CCTCGAGG	1 cut(s)	1478
Acc36I	ACCTGC	2 cut(s)	35, 451
AccB7I	CCANNNNNTGG	1 cut(s)	2762
AccI	GTMKAC	1 cut(s)	2010
AccII	CGCG	2 cut(s)	285, 475
AciI	CCGC	3 cut(s)	1619, 2291, 2397
AclI	AACGTT	1 cut(s)	1796
AclWI	GGATC	6 cut(s)	20, 33, 1859, 2166, 2466, 2479
AcoI	YGGCCR	1 cut(s)	1031
AcuI	CTGAAG	8 cut(s)	807, 1415, 1766, 2001, 2136, 2301, 2406, 2652
AfaI	GTAC	6 cut(s)	291, 1132, 1221, 1544, 2105, 2716
AfiI	CCNNNNNNNGG	6 cut(s)	365, 1412, 1815, 2737, 2762, 2823
AflIII	ACRYGT	2 cut(s)	620, 1001
AhdI	GACNNNNNGTC	1 cut(s)	2083
AhlI	ACTAGT	1 cut(s)	2576
AjnI	CCWGG	3 cut(s)	507, 1750, 2320
AleI	CACNNNNGTG	1 cut(s)	1287
AloI	GAACNNNNNNTCC	2 cut(s)	1392, 1424
Alw21I	GWGCWC	2 cut(s)	1496, 1793
Alw26I	GTCTC	3 cut(s)	948, 992, 2091
AlwI	GGATC	6 cut(s)	20, 33, 1859, 2166, 2466, 2479
AlwNI	CAGNNNCTG	3 cut(s)	665, 2495, 2762
Ama87I	CYCGRG	2 cut(s)	978, 1478
AoxI	GGCC	5 cut(s)	310, 1031, 1486, 2263, 2787
Asp700I	GAANNNNTTC	2 cut(s)	585, 2808
AspA2I	CCTAGG	1 cut(s)	1810
AspLEI	GCGC	4 cut(s)	179, 287, 475, 1456
AspS9I	GGNCC	5 cut(s)	685, 1150, 1348, 2264, 2369
AsuC2I	CCSGG	2 cut(s)	979, 980
AsuHPI	GGTGA	5 cut(s)	686, 818, 1301, 2322, 2643
AsuNHI	GCTAGC	1 cut(s)	917
AvaI	CYCGRG	2 cut(s)	978, 1478
AvaII	GGWCC	4 cut(s)	685, 1150, 1348, 2369
AvrII	CCTAGG	1 cut(s)	1810
AxyI	CCTNAGG	2 cut(s)	396, 1224
BaeI	ACNNNNGTAYC	4 cut(s)	1122, 1155, 1203, 1236
BalI	TGGCCA	1 cut(s)	1033
BamHI	GGATCC	2 cut(s)	25, 2471
BanII	GRGCYC	2 cut(s)	1496, 1793
BbsI	GAAGAC	2 cut(s)	1408, 2811
Bbv12I	GWGCWC	2 cut(s)	1496, 1793
BbvCI	CCTCAGC	1 cut(s)	930
BccI	CCATC	5 cut(s)	16, 638, 1174, 2056, 2243
BceAI	ACGGC	1 cut(s)	272
BciT130I	CCWGG	3 cut(s)	509, 1752, 2322
BcnI	CCSGG	2 cut(s)	979, 980
BcoDI	GTCTC	3 cut(s)	948, 992, 2091
BcuI	ACTAGT	1 cut(s)	2576
BfaI	CTAG	8 cut(s)	6, 263, 653, 918, 1811, 2529, 2577, 2899
BfmI	CTRYAG	3 cut(s)	430, 2484, 2568
BfoI	RGCGCY	1 cut(s)	180
BfuAI	ACCTGC	2 cut(s)	35, 451
BglI	GCCNNNNNGGC	1 cut(s)	2291
BglII	AGATCT	1 cut(s)	525
BlnI	CCTAGG	1 cut(s)	1810
BmcAI	AGTACT	1 cut(s)	2716
Bme1390I	CCNGG	5 cut(s)	509, 979, 980, 1752, 2322
Bme18I	GGWCC	4 cut(s)	685, 1150, 1348, 2369
BmeRI	GACNNNNNGTC	1 cut(s)	2083
BmeT110I	CYCGRG	2 cut(s)	978, 1478
BmgT120I	GGNCC	5 cut(s)	685, 1150, 1348, 2264, 2369
BmiI	GGNNCC	9 cut(s)	27, 465, 686, 862, 1152, 1582, 1669, 2255, 2473
BmrFI	CCNGG	5 cut(s)	509, 979, 980, 1752, 2322
BmsI	GCATC	8 cut(s)	386, 772, 1203, 1606, 2078, 2533, 2632, 2827
BmtI	GCTAGC	1 cut(s)	921
BoxI	GACNNNNGTC	1 cut(s)	219
BpiI	GAAGAC	2 cut(s)	1408, 2811
Bpu10I	CCTNAGC	3 cut(s)	930, 1490, 2287
BpuEI	CTTGAG	1 cut(s)	1917
BpuMI	CCSGG	2 cut(s)	979, 980
BsaBI	GATNNNNATC	1 cut(s)	2616
BsaJI	CCNNGG	8 cut(s)	864, 978, 1426, 1810, 2257, 2267, 2320, 2372
BsaXI	ACNNNNNCTCC	4 cut(s)	1175, 1205, 1511, 1541
Bsc4I	CCNNNNNNNGG	6 cut(s)	365, 1412, 1815, 2737, 2762, 2823
Bse1I	ACTGG	6 cut(s)	92, 855, 1406, 1833, 2756, 2767
Bse21I	CCTNAGG	2 cut(s)	396, 1224
Bse8I	GATNNNNATC	1 cut(s)	2616
BseBI	CCWGG	3 cut(s)	509, 1752, 2322
BseDI	CCNNGG	8 cut(s)	864, 978, 1426, 1810, 2257, 2267, 2320, 2372
BseGI	GGATG	6 cut(s)	192, 232, 504, 2088, 2692, 2832
BseJI	GATNNNNATC	1 cut(s)	2616
BseLI	CCNNNNNNNGG	6 cut(s)	365, 1412, 1815, 2737, 2762, 2823
BseMII	CTCAG	9 cut(s)	54, 387, 738, 921, 1050, 1481, 1686, 1776, 2726
BseNI	ACTGG	6 cut(s)	92, 855, 1406, 1833, 2756, 2767
BseRI	GAGGAG	4 cut(s)	1076, 1358, 1532, 1660
BseYI	CCCAGC	1 cut(s)	233
BsgI	GTGCAG	2 cut(s)	2481, 2576
Bsh1236I	CGCG	2 cut(s)	285, 475
BshFI	GGCC	5 cut(s)	312, 1033, 1488, 2265, 2789
BsiHKAI	GWGCWC	2 cut(s)	1496, 1793
BsiHKCI	CYCGRG	2 cut(s)	978, 1478
BsiSI	CCGG	1 cut(s)	979
BslFI	GGGAC	5 cut(s)	73, 250, 631, 1136, 2547
BslI	CCNNNNNNNGG	6 cut(s)	365, 1412, 1815, 2737, 2762, 2823
BsmAI	GTCTC	3 cut(s)	948, 992, 2091
BsmFI	GGGAC	5 cut(s)	73, 250, 631, 1136, 2547
BsmI	GAATGC	1 cut(s)	2306
BsnI	GGCC	5 cut(s)	312, 1033, 1488, 2265, 2789
BsoBI	CYCGRG	2 cut(s)	978, 1478
Bsp1286I	GDGCHC	2 cut(s)	1496, 1793
Bsp1407I	TGTACA	1 cut(s)	2103
Bsp143I	GATC	7 cut(s)	25, 525, 1864, 1939, 2158, 2471, 2617
BspACI	CCGC	3 cut(s)	1619, 2291, 2397
BspANI	GGCC	5 cut(s)	312, 1033, 1488, 2265, 2789
BspCNI	CTCAG	9 cut(s)	55, 388, 739, 922, 1051, 1482, 1685, 1777, 2727
BspFNI	CGCG	2 cut(s)	285, 475
BspHI	TCATGA	2 cut(s)	490, 2620
BspLI	GGNNCC	9 cut(s)	27, 465, 686, 862, 1152, 1582, 1669, 2255, 2473
BspMAI	CTGCAG	3 cut(s)	434, 2488, 2572
BspMI	ACCTGC	2 cut(s)	35, 451
BspOI	GCTAGC	1 cut(s)	921
BspPI	GGATC	6 cut(s)	20, 33, 1859, 2166, 2466, 2479
BsrGI	TGTACA	1 cut(s)	2103
BsrI	ACTGG	6 cut(s)	92, 855, 1406, 1833, 2756, 2767
BssECI	CCNNGG	8 cut(s)	864, 978, 1426, 1810, 2257, 2267, 2320, 2372
BssMI	GATC	7 cut(s)	25, 525, 1864, 1939, 2158, 2471, 2617
BssT1I	CCWWGG	5 cut(s)	1426, 1810, 2257, 2267, 2372
Bst2UI	CCWGG	3 cut(s)	509, 1752, 2322
Bst4CI	ACNGT	5 cut(s)	256, 423, 857, 1446, 1719
Bst6I	CTCTTC	3 cut(s)	1063, 1140, 2776
BstAPI	GCANNNNNTGC	4 cut(s)	1733, 2492, 2495, 2872
BstAUI	TGTACA	1 cut(s)	2103
BstC8I	GCNNGC	2 cut(s)	919, 1806
BstF5I	GGATG	6 cut(s)	192, 232, 504, 2088, 2692, 2832
BstFNI	CGCG	2 cut(s)	285, 475
BstH2I	RGCGCY	1 cut(s)	180
BstHHI	GCGC	4 cut(s)	179, 287, 475, 1456
BstKTI	GATC	7 cut(s)	28, 528, 1867, 1942, 2161, 2474, 2620
BstMAI	GTCTC	3 cut(s)	948, 992, 2091
BstMBI	GATC	7 cut(s)	25, 525, 1864, 1939, 2158, 2471, 2617
BstNI	CCWGG	3 cut(s)	509, 1752, 2322
BstNSI	RCATGY	5 cut(s)	624, 1772, 1808, 1979, 2875
BstPAI	GACNNNNGTC	1 cut(s)	219
BstSCI	CCNGG	5 cut(s)	507, 977, 978, 1750, 2320
BstSFI	CTRYAG	3 cut(s)	430, 2484, 2568
BstUI	CGCG	2 cut(s)	285, 475
BstV2I	GAAGAC	2 cut(s)	1408, 2811
BstX2I	RGATCY	5 cut(s)	25, 525, 1864, 2158, 2471
BstYI	RGATCY	5 cut(s)	25, 525, 1864, 2158, 2471
Bsu36I	CCTNAGG	2 cut(s)	396, 1224
BsuRI	GGCC	5 cut(s)	312, 1033, 1488, 2265, 2789
BtgZI	GCGATG	1 cut(s)	35
BtsCI	GGATG	6 cut(s)	192, 232, 504, 2088, 2692, 2832
BtsI	GCAGTG	3 cut(s)	1210, 1611, 2704
BtsIMutI	CAGTG	5 cut(s)	482, 1210, 1391, 1611, 2704
BveI	ACCTGC	2 cut(s)	35, 451
Cac8I	GCNNGC	2 cut(s)	919, 1806
CaiI	CAGNNNCTG	3 cut(s)	665, 2495, 2762
CciI	TCATGA	2 cut(s)	490, 2620
CfoI	GCGC	4 cut(s)	179, 287, 475, 1456
Cfr13I	GGNCC	5 cut(s)	685, 1150, 1348, 2264, 2369
Cfr9I	CCCGGG	1 cut(s)	978
CseI	GACGC	1 cut(s)	291
Csp6I	GTAC	6 cut(s)	290, 1131, 1220, 1543, 2104, 2715
CviQI	GTAC	6 cut(s)	290, 1131, 1220, 1543, 2104, 2715
DpnI	GATC	7 cut(s)	27, 527, 1866, 1941, 2160, 2473, 2619
DpnII	GATC	7 cut(s)	25, 525, 1864, 1939, 2158, 2471, 2617
DraI	TTTAAA	1 cut(s)	388
DrdI	GACNNNNNNGTC	1 cut(s)	1381
DriI	GACNNNNNGTC	1 cut(s)	2083
DseDI	GACNNNNNNGTC	1 cut(s)	1381
EaeI	YGGCCR	1 cut(s)	1031
Eam1104I	CTCTTC	3 cut(s)	1063, 1140, 2776
Eam1105I	GACNNNNNGTC	1 cut(s)	2083
EarI	CTCTTC	3 cut(s)	1063, 1140, 2776
Ecl136II	GAGCTC	2 cut(s)	1494, 1791
Eco130I	CCWWGG	5 cut(s)	1426, 1810, 2257, 2267, 2372
Eco147I	AGGCCT	1 cut(s)	2789
Eco24I	GRGCYC	2 cut(s)	1496, 1793
Eco32I	GATATC	2 cut(s)	1234, 1957
Eco47I	GGWCC	4 cut(s)	685, 1150, 1348, 2369
Eco53kI	GAGCTC	2 cut(s)	1494, 1791
Eco57I	CTGAAG	8 cut(s)	807, 1415, 1766, 2001, 2136, 2301, 2406, 2652
Eco81I	CCTNAGG	2 cut(s)	396, 1224
Eco88I	CYCGRG	2 cut(s)	978, 1478
EcoICRI	GAGCTC	2 cut(s)	1494, 1791
EcoO109I	RGGNCCY	2 cut(s)	685, 1150
EcoRI	GAATTC	1 cut(s)	547
EcoRII	CCWGG	3 cut(s)	507, 1750, 2320
EcoRV	GATATC	2 cut(s)	1234, 1957
EcoT14I	CCWWGG	5 cut(s)	1426, 1810, 2257, 2267, 2372
EcoT38I	GRGCYC	2 cut(s)	1496, 1793
ErhI	CCWWGG	5 cut(s)	1426, 1810, 2257, 2267, 2372
FalI	AAGNNNNNCTT	2 cut(s)	1004, 1036
FaqI	GGGAC	5 cut(s)	73, 250, 631, 1136, 2547
FblI	GTMKAC	1 cut(s)	2010
FokI	GGATG	6 cut(s)	179, 239, 491, 2095, 2699, 2839
FriOI	GRGCYC	2 cut(s)	1496, 1793
FspBI	CTAG	8 cut(s)	6, 263, 653, 918, 1811, 2529, 2577, 2899
GlaI	GCGC	4 cut(s)	178, 286, 474, 1455
GsaI	CCCAGC	1 cut(s)	237
HaeII	RGCGCY	1 cut(s)	180
HaeIII	GGCC	5 cut(s)	312, 1033, 1488, 2265, 2789
HapII	CCGG	1 cut(s)	979
HgaI	GACGC	1 cut(s)	291
HhaI	GCGC	4 cut(s)	179, 287, 475, 1456
Hin6I	GCGC	4 cut(s)	177, 285, 473, 1454
HinP1I	GCGC	4 cut(s)	177, 285, 473, 1454
HincII	GTYRAC	2 cut(s)	891, 2535
HindII	GTYRAC	2 cut(s)	891, 2535
HindIII	AAGCTT	1 cut(s)	2388
HpaI	GTTAAC	1 cut(s)	2535
HpaII	CCGG	1 cut(s)	979
HphI	GGTGA	5 cut(s)	686, 818, 1301, 2322, 2643
Hpy166II	GTNNAC	6 cut(s)	753, 809, 891, 1545, 2011, 2535
Hpy8I	GTNNAC	6 cut(s)	753, 809, 891, 1545, 2011, 2535
HpyCH4III	ACNGT	5 cut(s)	256, 423, 857, 1446, 1719
HpyCH4IV	ACGT	5 cut(s)	1003, 1049, 1541, 1628, 1796
HpySE526I	ACGT	5 cut(s)	1003, 1049, 1541, 1628, 1796
HspAI	GCGC	4 cut(s)	177, 285, 473, 1454
KspAI	GTTAAC	1 cut(s)	2535
Kzo9I	GATC	7 cut(s)	25, 525, 1864, 1939, 2158, 2471, 2617
LmnI	GCTCC	3 cut(s)	41, 709, 1673
LweI	GCATC	8 cut(s)	386, 772, 1203, 1606, 2078, 2533, 2632, 2827
MaeI	CTAG	8 cut(s)	6, 263, 653, 918, 1811, 2529, 2577, 2899
MaeII	ACGT	5 cut(s)	1003, 1049, 1541, 1628, 1796
MaeIII	GTNAC	7 cut(s)	480, 842, 1289, 1415, 1756, 2110, 2758
MalI	GATC	7 cut(s)	27, 527, 1866, 1941, 2160, 2473, 2619
MboI	GATC	7 cut(s)	25, 525, 1864, 1939, 2158, 2471, 2617
MflI	RGATCY	5 cut(s)	25, 525, 1864, 2158, 2471
MhlI	GDGCHC	2 cut(s)	1496, 1793
MlsI	TGGCCA	1 cut(s)	1033
MluNI	TGGCCA	1 cut(s)	1033
MlyI	GAGTC	4 cut(s)	662, 758, 2006, 2569
MmeI	TCCRAC	2 cut(s)	1041, 1410
Mox20I	TGGCCA	1 cut(s)	1033
MroXI	GAANNNNTTC	2 cut(s)	585, 2808
MscI	TGGCCA	1 cut(s)	1033
MseI	TTAA	5 cut(s)	249, 387, 2415, 2534, 2775
MslI	CAYNNNNRTG	3 cut(s)	495, 1287, 2060
Msp20I	TGGCCA	1 cut(s)	1033
MspA1I	CMGCKG	2 cut(s)	929, 2519
MspI	CCGG	1 cut(s)	979
MspR9I	CCNGG	5 cut(s)	509, 979, 980, 1752, 2322
Mva1269I	GAATGC	1 cut(s)	2306
MvaI	CCWGG	3 cut(s)	509, 1752, 2322
MvnI	CGCG	2 cut(s)	285, 475
NciI	CCSGG	2 cut(s)	979, 980
NdeII	GATC	7 cut(s)	25, 525, 1864, 1939, 2158, 2471, 2617
NheI	GCTAGC	1 cut(s)	917
NlaIV	GGNNCC	9 cut(s)	27, 465, 686, 862, 1152, 1582, 1669, 2255, 2473
NmuCI	GTSAC	3 cut(s)	480, 1289, 1415
NspI	RCATGY	5 cut(s)	624, 1772, 1808, 1979, 2875
OliI	CACNNNNGTG	1 cut(s)	1287
PaeI	GCATGC	1 cut(s)	1808
PaeR7I	CTCGAG	1 cut(s)	1478
PagI	TCATGA	2 cut(s)	490, 2620
PceI	AGGCCT	1 cut(s)	2789
PciI	ACATGT	1 cut(s)	620
PctI	GAATGC	1 cut(s)	2306
PdmI	GAANNNNTTC	2 cut(s)	585, 2808
PfeI	GAWTC	6 cut(s)	137, 317, 487, 586, 662, 1025
PflMI	CCANNNNNTGG	1 cut(s)	2762
PfoI	TCCNGGA	1 cut(s)	507
PleI	GAGTC	4 cut(s)	662, 757, 2006, 2568
PpsI	GAGTC	4 cut(s)	662, 757, 2006, 2568
PpuMI	RGGWCCY	2 cut(s)	685, 1150
PscI	ACATGT	1 cut(s)	620
PshAI	GACNNNNGTC	1 cut(s)	219
Psp124BI	GAGCTC	2 cut(s)	1496, 1793
Psp1406I	AACGTT	1 cut(s)	1796
Psp5II	RGGWCCY	2 cut(s)	685, 1150
Psp6I	CCWGG	3 cut(s)	507, 1750, 2320
PspFI	CCCAGC	1 cut(s)	233
PspGI	CCWGG	3 cut(s)	507, 1750, 2320
PspN4I	GGNNCC	9 cut(s)	27, 465, 686, 862, 1152, 1582, 1669, 2255, 2473
PspPI	GGNCC	5 cut(s)	685, 1150, 1348, 2264, 2369
PspPPI	RGGWCCY	2 cut(s)	685, 1150
PspXI	VCTCGAGB	1 cut(s)	1478
PstI	CTGCAG	3 cut(s)	434, 2488, 2572
PstNI	CAGNNNCTG	3 cut(s)	665, 2495, 2762
PsuI	RGATCY	5 cut(s)	25, 525, 1864, 2158, 2471
PvuII	CAGCTG	2 cut(s)	929, 2519
RsaI	GTAC	6 cut(s)	291, 1132, 1221, 1544, 2105, 2716
RsaNI	GTAC	6 cut(s)	290, 1131, 1220, 1543, 2104, 2715
RseI	CAYNNNNRTG	3 cut(s)	495, 1287, 2060
SacI	GAGCTC	2 cut(s)	1496, 1793
SaqAI	TTAA	5 cut(s)	249, 387, 2415, 2534, 2775
Sau3AI	GATC	7 cut(s)	25, 525, 1864, 1939, 2158, 2471, 2617
Sau96I	GGNCC	5 cut(s)	685, 1150, 1348, 2264, 2369
ScaI	AGTACT	1 cut(s)	2716
SchI	GAGTC	4 cut(s)	662, 758, 2006, 2569
ScrFI	CCNGG	5 cut(s)	509, 979, 980, 1752, 2322
SduI	GDGCHC	2 cut(s)	1496, 1793
SfaNI	GCATC	8 cut(s)	386, 772, 1203, 1606, 2078, 2533, 2632, 2827
SfcI	CTRYAG	3 cut(s)	430, 2484, 2568
Sfr274I	CTCGAG	1 cut(s)	1478
SinI	GGWCC	4 cut(s)	685, 1150, 1348, 2369
SlaI	CTCGAG	1 cut(s)	1478
SmaI	CCCGGG	1 cut(s)	980
SmiMI	CAYNNNNRTG	3 cut(s)	495, 1287, 2060
SmlI	CTYRAG	2 cut(s)	1478, 1932
SmoI	CTYRAG	2 cut(s)	1478, 1932
SpeI	ACTAGT	1 cut(s)	2576
SphI	GCATGC	1 cut(s)	1808
SseBI	AGGCCT	1 cut(s)	2789
SsiI	CCGC	3 cut(s)	1619, 2291, 2397
SspI	AATATT	1 cut(s)	556
SspMI	CTAG	8 cut(s)	6, 263, 653, 918, 1811, 2529, 2577, 2899
SstI	GAGCTC	2 cut(s)	1496, 1793
StuI	AGGCCT	1 cut(s)	2789
StyD4I	CCNGG	5 cut(s)	507, 977, 978, 1750, 2320
StyI	CCWWGG	5 cut(s)	1426, 1810, 2257, 2267, 2372
TaaI	ACNGT	5 cut(s)	256, 423, 857, 1446, 1719
TaiI	ACGT	5 cut(s)	1006, 1052, 1544, 1631, 1799
TaqI	TCGA	3 cut(s)	418, 1479, 2015
TatI	WGTACW	2 cut(s)	2103, 2714
TauI	GCSGC	2 cut(s)	2294, 2399
TfiI	GAWTC	6 cut(s)	137, 317, 487, 586, 662, 1025
Tru1I	TTAA	5 cut(s)	249, 387, 2415, 2534, 2775
Tru9I	TTAA	5 cut(s)	249, 387, 2415, 2534, 2775
TscAI	CASTG	5 cut(s)	489, 1210, 1398, 1611, 2704
TseFI	GTSAC	3 cut(s)	480, 1289, 1415
Tsp45I	GTSAC	3 cut(s)	480, 1289, 1415
TspGWI	ACGGA	1 cut(s)	2354
TspMI	CCCGGG	1 cut(s)	978
TspRI	CASTG	5 cut(s)	489, 1210, 1398, 1611, 2704
Van91I	CCANNNNNTGG	1 cut(s)	2762
VpaK11BI	GGWCC	4 cut(s)	685, 1150, 1348, 2369
XceI	RCATGY	5 cut(s)	624, 1772, 1808, 1979, 2875
XcmI	CCANNNNNNNNNTGG	1 cut(s)	203
XhoI	CTCGAG	1 cut(s)	1478
XmaI	CCCGGG	1 cut(s)	978
XmaJI	CCTAGG	1 cut(s)	1810
XmiI	GTMKAC	1 cut(s)	2010
XmnI	GAANNNNTTC	2 cut(s)	585, 2808
XspI	CTAG	8 cut(s)	6, 263, 653, 918, 1811, 2529, 2577, 2899
ZrmI	AGTACT	1 cut(s)	2716

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.