Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0005116

Physical Location & Seq

Genomic Coordinates Forward (+)

28152276 .. 28168871

Gene Structure 16596 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG283600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGGCTAGCTCTACAAAAGCTATGGATCCAGCTTTTCAGGGAGCAGGTCAAAGGGTAGGGACTGAAATTTGGCGAATTGAGGATTTCCAGCCAGTTCCGTTGCCAAAATCTGAATATGGAAAATTCTATATGGGAGATTCTTATATTGTCTTGCAGACAACACAGAACAGAGGGGGTGCTTATCTCTATGACATCCACTTCTGGATTGGGAAAGATACAAGTCAGGATGAAGCTGGCACAGCAGCTATTAAAACTGTTGAACTAGATACAGCTCTTGGAGGACGTGCTGTGCAACATAGGGAAATTCAAGGCCATGAATCTGATAAGTTTTTGTCCTATTTCAAACCATGTATTATACCTCTGGAGGGGGGTGTTGCATCTGGATTTAAAAAGCCTGAGGAAGAAGAATTTGAAACTCGACTTTATATCTGCAGAGGAAAACGTGTTGTCAGAATGAAGCAGGTTCCTTTTGCGCGTTCGTCACTGAATCATGATGATGTGTTCATCCTGGACAGCCAGAATAAGATCTTTCAGTTCAACGGTGCGAATTCCAATATCCAGGAAAGGGCGAAGGCTTTGGAAGTCATCCAATTTTTGAAAGAAAAGTATCATCATGGGACATGTGATGTTGCAATAGTTGATGATGGGAAGCTAGACACAGAATCTGACTCTGGTGAGTTCTGGGTCCTAATGGGTGGCTTTGCTCCGATTAGCAAGAAGGTTGCCAATGAAGATGATGTCGTTCCTGAGTCCACTCCTGCTACACTGTATAGCATAACTGATGGTGAAGTGAAGATCGTAGAAGGTGAACTATCCAAATCCTTGCTTGAAAACAACAAATGCTACTTACTGGACTGTGGTTCTGAAGTATTTGTTTGGGTCGGTCGGGTGACACAAGTGGAGGACAGAAAAGCTGCTAGCCAAGCAGCTGAGGAATTTGTTTCTCATCAGAATAGACCAAAATCAACACGAATAACCCGGCTTATTCAAGGTTATGAGACACGTTCATTCAAGTCCAACTTCGATTCTTGGCCATTGGGATCAGCAACGTCTGGTGCTGAGGAGGGAAGAGGAAAAGTAGCAGCTTTGCTGAAGCAACAAGGTGTTGGTGTAAAGGGCGCGACAAAGGGTGCCCCTGTAAATGAAGAGGTCCCACCTTTGCTTGAAGGAGGTGGAAAGATGGAGGTATGGTGCATCAATGGCAGCGCTAAAACCCAATTACCTAAGGAAGATATCGGCAAATTTTTTAGTGGAGATTGCTACATAATTCTTTATACGTACCACTCTGGTGATAGAAAGGATGACTACTTTCTGTGCTGTTGGTTTGGAAAGGATAGTATTGAGGAGGACCAGAAAACAGCTTCTCATTTGGCGACTTCAATTTCCAACTCACTGAAGGGAAGACCGGTTCAGGGTCACATATTCCAAGGTAAAGAGCCACCACAGTTTGTTGCGCTCTTTCAGCCTATGGTTGTTCTCAAGGGTGGCCTGAGCTCTGGGTATAAAAAGTTTGTTGAGGAGAAAGGGTTGGCTGATGAAACTTACACAGCAGAGTGTGTTGCACTCTTTCGGTTATCTGGAACCTCTATTCATAATAACAAAGCCGTGCAAGTTGATACGGTGGCAACGTCATTGAACTCTACCGAGTGTTTTCTTCTGCAATCTGGCTCCTCAGTTTTTGCTTGGAATGGAAATCAATCTACCATTGAGCAGCAACAGTTAGCAGCAAAGCTTGCAGAATTTCTGAAGCCAGGAGTTACTTTAAAACATGCTAAAGAAGGAACTGAGAGCTCAACCTTCTGGTCTGCCCTAGGAGGGAAACAAAATTACACCAGTAATAAAGTTGCTTCTGAGATTTGCAGAGATCCACACCTGTTCACATTCTCATTCAACAAAGGAAAGTTTCAGGTGGAAGAAATATACAACTTTACTCAAGATGATCTACTGACAGAGGATATCCTTATACTGGATACACATGCTGAAGTCTTTGTTTGGGTTGGTCAATGTGTAGACTTGAAAGAAAAACAAAATGCTTTTGAAATTGGCAAGAAATACATAGAGATGGCAGCATCTCTGGACGGGTTGTCTCCTAATGTACCATTGTACAAAGTTACTGAAGGAAATGAACCTCGCTTCTTCACAACATACTTTTCATGGGACCTTGCAAAGGCTAATGTTCAAGGAAACTCATTCCAGAAGAAGGTGTCCGTTCTGTTTGGCCATGCTGTGGAGAGCCAGGACAAATCTGATGGGAATCAAGGAGGGCCAAGGCAAAGAGCTGAAGCCTTAGCTGCTCTATCATCTGCATTCAATTCTTCCCCTGGAAAATCACCCCCTACGGTAATTAAAGTTGATTGTCACTACCATTTACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005884 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009987 GO:0010639 GO:0010817 GO:0015629 GO:0016043 GO:0022607 GO:0030029 GO:0030036 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0031333 GO:0032271 GO:0032272 GO:0032432 GO:0032535 GO:0032879 GO:0032956 GO:0032970 GO:0033043 GO:0040008 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043242 GO:0043244 GO:0043254 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044877 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051014 GO:0051015 GO:0051017 GO:0051049 GO:0051128 GO:0051129 GO:0051493 GO:0051494 GO:0051693 GO:0061572 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:2000012

KEGG Pathways

Metabolic & Signaling

ko04666 ko04810 ko05203 map04666 map04810 map05203

Pfam Domains

Protein Families

Gelsolin VHP

Protein Analysis

791

Amino Acids

87.43

Weight (kDa)

5.66

Isoelectric Point (pI)

37.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gelsolin	PF00626	30 - 111	2.4e-13	Gelsolin repeat
Gelsolin	PF00626	149 - 217	1.1e-11	Gelsolin repeat
Gelsolin	PF00626	267 - 337	2.2e-12	Gelsolin repeat
DUF7904	PF25480	403 - 491	6.1e-06	Domain of unknown function (DUF7904)
Gelsolin	PF00626	409 - 483	1.2e-08	Gelsolin repeat
Gelsolin	PF00626	533 - 593	6.3e-07	Gelsolin repeat
Gelsolin	PF00626	635 - 713	3e-06	Gelsolin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005116)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41740 AT2G41740 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410
fragaria_vesca	FvH4_6g23900 FvH4_6g23900 FvH4_6g23900 FvH4_6g23900
malus_domestica	MD12G1074400.v1.1 MD14G1072600.v1.1
prunus_persica	Prupe.7G059400_v2.0.a1
pyrus_communis	pycom12g06410 pycom14g06250
rosa_chinensis	RchiOBHm_Chr3g0482581
rosa_laevigata	RLG00000023341
rosa_roxburghii	Rroxscaffold_6G00399140
rosa_rugosa	Rorug03G0197000 Rorug03G0197100
rosa_samantha	Rh3AG248500 Rh3BG283600 Rh3DG277400
rosa_wichuraiana	Rw3G022440

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	35, 451
AccB1I	GGYRCC	1 cut(s)	1130
AccB7I	CCANNNNNTGG	1 cut(s)	2227
AccI	GTMKAC	1 cut(s)	2010
AccII	CGCG	2 cut(s)	475, 1121
AclWI	GGATC	4 cut(s)	20, 33, 1048, 1859
AcoI	YGGCCR	2 cut(s)	1031, 2218
AcsI	RAATTY	8 cut(s)	66, 122, 303, 407, 547, 935, 1241, 1739
AcuI	CTGAAG	7 cut(s)	885, 1112, 1415, 1766, 2001, 2136, 2301
AfaI	GTAC	3 cut(s)	1280, 2097, 2105
AfeI	AGCGCT	1 cut(s)	1207
AfiI	CCNNNNNNNGG	8 cut(s)	365, 565, 1412, 1815, 1966, 2167, 2200, 2227
AflIII	ACRYGT	3 cut(s)	442, 620, 1001
AgeI	ACCGGT	1 cut(s)	1405
AhdI	GACNNNNNGTC	1 cut(s)	2083
AjiI	CACGTC	1 cut(s)	284
AjnI	CCWGG	5 cut(s)	507, 558, 1750, 2235, 2320
AleI	CACNNNNGTG	1 cut(s)	1287
AloI	GAACNNNNNNTCC	2 cut(s)	1392, 1424
Alw21I	GWGCWC	2 cut(s)	1496, 1793
Alw26I	GTCTC	2 cut(s)	992, 2091
AlwI	GGATC	4 cut(s)	20, 33, 1048, 1859
AlwNI	CAGNNNCTG	1 cut(s)	665
Aor51HI	AGCGCT	1 cut(s)	1207
AoxI	GGCC	5 cut(s)	310, 1031, 1486, 2218, 2264
ApeKI	GCWGC	9 cut(s)	242, 914, 926, 1082, 1203, 1711, 1724, 2066, 2291
ApoI	RAATTY	8 cut(s)	66, 122, 303, 407, 547, 935, 1241, 1739
AsiGI	ACCGGT	1 cut(s)	1405
AspA2I	CCTAGG	1 cut(s)	1810
AspLEI	GCGC	4 cut(s)	475, 1121, 1208, 1456
AspS9I	GGNCC	5 cut(s)	685, 1150, 1348, 2158, 2264
AsuC2I	CCSGG	1 cut(s)	979
AsuHPI	GGTGA	6 cut(s)	686, 797, 818, 901, 1301, 2322
AsuNHI	GCTAGC	2 cut(s)	5, 917
AvaII	GGWCC	4 cut(s)	685, 1150, 1348, 2158
AvrII	CCTAGG	1 cut(s)	1810
AxyI	CCTNAGG	2 cut(s)	396, 1224
BaeGI	GKGCMC	1 cut(s)	1135
BalI	TGGCCA	2 cut(s)	1033, 2220
BamHI	GGATCC	1 cut(s)	25
BanI	GGYRCC	1 cut(s)	1130
BanII	GRGCYC	2 cut(s)	1496, 1793
BbsI	GAAGAC	1 cut(s)	1408
Bbv12I	GWGCWC	2 cut(s)	1496, 1793
BbvCI	CCTCAGC	2 cut(s)	930, 1059
BbvI	GCAGC	9 cut(s)	254, 901, 938, 1094, 1215, 1723, 1736, 2078, 2278
BccI	CCATC	5 cut(s)	638, 776, 1174, 2056, 2243
BceAI	ACGGC	1 cut(s)	1589
BciT130I	CCWGG	5 cut(s)	509, 560, 1752, 2237, 2322
BciVI	GTATCC	1 cut(s)	1963
BcnI	CCSGG	1 cut(s)	979
BcoDI	GTCTC	2 cut(s)	992, 2091
BfaI	CTAG	5 cut(s)	6, 263, 653, 918, 1811
BfmI	CTRYAG	1 cut(s)	430
BfoI	RGCGCY	1 cut(s)	1209
BfuAI	ACCTGC	2 cut(s)	35, 451
BfuI	GTATCC	1 cut(s)	1963
BglII	AGATCT	1 cut(s)	525
BisI	GCNGC	9 cut(s)	243, 915, 927, 1083, 1204, 1712, 1725, 2067, 2292
BlnI	CCTAGG	1 cut(s)	1810
BlsI	GCNGC	9 cut(s)	244, 916, 928, 1084, 1205, 1713, 1726, 2068, 2293
Bme1390I	CCNGG	6 cut(s)	509, 560, 979, 1752, 2237, 2322
Bme18I	GGWCC	4 cut(s)	685, 1150, 1348, 2158
BmeRI	GACNNNNNGTC	1 cut(s)	2083
BmgBI	CACGTC	1 cut(s)	284
BmgT120I	GGNCC	5 cut(s)	685, 1150, 1348, 2158, 2264
BmiI	GGNNCC	8 cut(s)	27, 465, 686, 1132, 1152, 1582, 1669, 2159
BmrFI	CCNGG	6 cut(s)	509, 560, 979, 1752, 2237, 2322
BmsI	GCATC	3 cut(s)	386, 1203, 2078
BmtI	GCTAGC	2 cut(s)	9, 921
BpiI	GAAGAC	1 cut(s)	1408
BpmI	CTGGAG	1 cut(s)	383
Bpu10I	CCTNAGC	4 cut(s)	930, 1059, 1490, 2287
BpuEI	CTTGAG	2 cut(s)	1463, 1917
BpuMI	CCSGG	1 cut(s)	979
BsaAI	YACGTR	1 cut(s)	1278
BsaBI	GATNNNNATC	1 cut(s)	2253
BsaJI	CCNNGG	4 cut(s)	1426, 1810, 2267, 2320
BsaWI	WCCGGW	1 cut(s)	1405
BsaXI	ACNNNNNCTCC	4 cut(s)	1175, 1205, 1511, 1541
Bsc4I	CCNNNNNNNGG	8 cut(s)	365, 565, 1412, 1815, 1966, 2167, 2200, 2227
Bse118I	RCCGGY	1 cut(s)	1405
Bse1I	ACTGG	4 cut(s)	92, 855, 1833, 1971
Bse21I	CCTNAGG	2 cut(s)	396, 1224
Bse8I	GATNNNNATC	1 cut(s)	2253
BseBI	CCWGG	5 cut(s)	509, 560, 1752, 2237, 2322
BseDI	CCNNGG	4 cut(s)	1426, 1810, 2267, 2320
BseGI	GGATG	5 cut(s)	192, 232, 504, 585, 1306
BseJI	GATNNNNATC	1 cut(s)	2253
BseLI	CCNNNNNNNGG	8 cut(s)	365, 565, 1412, 1815, 1966, 2167, 2200, 2227
BseMII	CTCAG	8 cut(s)	387, 738, 921, 1050, 1481, 1686, 1776, 1842
BseNI	ACTGG	4 cut(s)	92, 855, 1833, 1971
BseRI	GAGGAG	4 cut(s)	1076, 1358, 1532, 1660
BseSI	GKGCMC	1 cut(s)	1135
BseXI	GCAGC	9 cut(s)	254, 901, 938, 1094, 1215, 1723, 1736, 2078, 2278
Bsh1236I	CGCG	2 cut(s)	475, 1121
Bsh1285I	CGRYCG	1 cut(s)	886
BshFI	GGCC	5 cut(s)	312, 1033, 1488, 2220, 2266
BshNI	GGYRCC	1 cut(s)	1130
BshTI	ACCGGT	1 cut(s)	1405
BsiEI	CGRYCG	1 cut(s)	886
BsiHKAI	GWGCWC	2 cut(s)	1496, 1793
BsiSI	CCGG	2 cut(s)	979, 1406
BslFI	GGGAC	4 cut(s)	73, 631, 1136, 2171
BslI	CCNNNNNNNGG	8 cut(s)	365, 565, 1412, 1815, 1966, 2167, 2200, 2227
BsmAI	GTCTC	2 cut(s)	992, 2091
BsmFI	GGGAC	4 cut(s)	73, 631, 1136, 2171
BsmI	GAATGC	1 cut(s)	2306
BsnI	GGCC	5 cut(s)	312, 1033, 1488, 2220, 2266
Bsp1286I	GDGCHC	3 cut(s)	1135, 1496, 1793
Bsp1407I	TGTACA	1 cut(s)	2103
Bsp143I	GATC	6 cut(s)	25, 525, 795, 1040, 1864, 1939
BspANI	GGCC	5 cut(s)	312, 1033, 1488, 2220, 2266
BspCNI	CTCAG	8 cut(s)	388, 739, 922, 1051, 1482, 1685, 1777, 1843
BspFNI	CGCG	2 cut(s)	475, 1121
BspHI	TCATGA	1 cut(s)	490
BspLI	GGNNCC	8 cut(s)	27, 465, 686, 1132, 1152, 1582, 1669, 2159
BspMAI	CTGCAG	1 cut(s)	434
BspMI	ACCTGC	2 cut(s)	35, 451
BspOI	GCTAGC	2 cut(s)	9, 921
BspPI	GGATC	4 cut(s)	20, 33, 1048, 1859
BspT107I	GGYRCC	1 cut(s)	1130
BsrFI	RCCGGY	1 cut(s)	1405
BsrGI	TGTACA	1 cut(s)	2103
BsrI	ACTGG	4 cut(s)	92, 855, 1833, 1971
BssAI	RCCGGY	1 cut(s)	1405
BssECI	CCNNGG	4 cut(s)	1426, 1810, 2267, 2320
BssMI	GATC	6 cut(s)	25, 525, 795, 1040, 1864, 1939
BssT1I	CCWWGG	3 cut(s)	1426, 1810, 2267
Bst2UI	CCWGG	5 cut(s)	509, 560, 1752, 2237, 2322
Bst4CI	ACNGT	8 cut(s)	256, 542, 768, 857, 1446, 1621, 1719, 2341
Bst6I	CTCTTC	2 cut(s)	1063, 1140
BstAPI	GCANNNNNTGC	1 cut(s)	1733
BstAUI	TGTACA	1 cut(s)	2103
BstBAI	YACGTR	1 cut(s)	1278
BstC8I	GCNNGC	4 cut(s)	7, 235, 919, 1734
BstENI	CCTNNNNNAGG	1 cut(s)	2165
BstF5I	GGATG	5 cut(s)	192, 232, 504, 585, 1306
BstFNI	CGCG	2 cut(s)	475, 1121
BstH2I	RGCGCY	1 cut(s)	1209
BstHHI	GCGC	4 cut(s)	475, 1121, 1208, 1456
BstKTI	GATC	6 cut(s)	28, 528, 798, 1043, 1867, 1942
BstMAI	GTCTC	2 cut(s)	992, 2091
BstMBI	GATC	6 cut(s)	25, 525, 795, 1040, 1864, 1939
BstMCI	CGRYCG	1 cut(s)	886
BstMWI	GCNNNNNNNGC	6 cut(s)	239, 923, 1200, 1462, 1733, 2291
BstNI	CCWGG	5 cut(s)	509, 560, 1752, 2237, 2322
BstNSI	RCATGY	3 cut(s)	624, 1772, 1979
BstSCI	CCNGG	6 cut(s)	507, 558, 977, 1750, 2235, 2320
BstSFI	CTRYAG	1 cut(s)	430
BstSLI	GKGCMC	1 cut(s)	1135
BstSNI	TACGTA	1 cut(s)	1278
BstUI	CGCG	2 cut(s)	475, 1121
BstV1I	GCAGC	9 cut(s)	254, 901, 938, 1094, 1215, 1723, 1736, 2078, 2278
BstV2I	GAAGAC	1 cut(s)	1408
BstX2I	RGATCY	3 cut(s)	25, 525, 1864
BstYI	RGATCY	3 cut(s)	25, 525, 1864
Bsu36I	CCTNAGG	2 cut(s)	396, 1224
BsuI	GTATCC	1 cut(s)	1963
BsuRI	GGCC	5 cut(s)	312, 1033, 1488, 2220, 2266
BtrI	CACGTC	1 cut(s)	284
BtsCI	GGATG	5 cut(s)	192, 232, 504, 585, 1306
BtsIMutI	CAGTG	3 cut(s)	482, 764, 1391
BveI	ACCTGC	2 cut(s)	35, 451
Cac8I	GCNNGC	4 cut(s)	7, 235, 919, 1734
CaiI	CAGNNNCTG	1 cut(s)	665
CciI	TCATGA	1 cut(s)	490
CfoI	GCGC	4 cut(s)	475, 1121, 1208, 1456
Cfr10I	RCCGGY	1 cut(s)	1405
Cfr13I	GGNCC	5 cut(s)	685, 1150, 1348, 2158, 2264
Csp6I	GTAC	3 cut(s)	1279, 2096, 2104
CspAI	ACCGGT	1 cut(s)	1405
CviAII	CATG	9 cut(s)	314, 348, 491, 614, 621, 1769, 1976, 2154, 2222
CviQI	GTAC	3 cut(s)	1279, 2096, 2104
DpnI	GATC	6 cut(s)	27, 527, 797, 1042, 1866, 1941
DpnII	GATC	6 cut(s)	25, 525, 795, 1040, 1864, 1939
DraI	TTTAAA	2 cut(s)	388, 1764
DriI	GACNNNNNGTC	1 cut(s)	2083
EaeI	YGGCCR	2 cut(s)	1031, 2218
Eam1104I	CTCTTC	2 cut(s)	1063, 1140
Eam1105I	GACNNNNNGTC	1 cut(s)	2083
EarI	CTCTTC	2 cut(s)	1063, 1140
Ecl136II	GAGCTC	2 cut(s)	1494, 1791
Eco105I	TACGTA	1 cut(s)	1278
Eco130I	CCWWGG	3 cut(s)	1426, 1810, 2267
Eco24I	GRGCYC	2 cut(s)	1496, 1793
Eco32I	GATATC	2 cut(s)	1234, 1957
Eco47I	GGWCC	4 cut(s)	685, 1150, 1348, 2158
Eco47III	AGCGCT	1 cut(s)	1207
Eco53kI	GAGCTC	2 cut(s)	1494, 1791
Eco57I	CTGAAG	7 cut(s)	885, 1112, 1415, 1766, 2001, 2136, 2301
Eco81I	CCTNAGG	2 cut(s)	396, 1224
EcoICRI	GAGCTC	2 cut(s)	1494, 1791
EcoNI	CCTNNNNNAGG	1 cut(s)	2165
EcoO109I	RGGNCCY	3 cut(s)	685, 1150, 2158
EcoRI	GAATTC	1 cut(s)	547
EcoRII	CCWGG	5 cut(s)	507, 558, 1750, 2235, 2320
EcoRV	GATATC	2 cut(s)	1234, 1957
EcoT14I	CCWWGG	3 cut(s)	1426, 1810, 2267
EcoT38I	GRGCYC	2 cut(s)	1496, 1793
ErhI	CCWWGG	3 cut(s)	1426, 1810, 2267
FaeI	CATG	9 cut(s)	317, 351, 494, 617, 624, 1772, 1979, 2157, 2225
FalI	AAGNNNNNCTT	2 cut(s)	1004, 1036
FaqI	GGGAC	4 cut(s)	73, 631, 1136, 2171
FatI	CATG	9 cut(s)	313, 347, 490, 613, 620, 1768, 1975, 2153, 2221
FblI	GTMKAC	1 cut(s)	2010
Fnu4HI	GCNGC	9 cut(s)	243, 915, 927, 1083, 1204, 1712, 1725, 2067, 2292
FokI	GGATG	5 cut(s)	179, 239, 491, 572, 1313
FriOI	GRGCYC	2 cut(s)	1496, 1793
Fsp4HI	GCNGC	9 cut(s)	243, 915, 927, 1083, 1204, 1712, 1725, 2067, 2292
FspBI	CTAG	5 cut(s)	6, 263, 653, 918, 1811
GlaI	GCGC	4 cut(s)	474, 1120, 1207, 1455
GluI	GCNGC	9 cut(s)	243, 915, 927, 1083, 1204, 1712, 1725, 2067, 2292
GsuI	CTGGAG	1 cut(s)	383
HaeII	RGCGCY	1 cut(s)	1209
HaeIII	GGCC	5 cut(s)	312, 1033, 1488, 2220, 2266
HapII	CCGG	2 cut(s)	979, 1406
HhaI	GCGC	4 cut(s)	475, 1121, 1208, 1456
Hin1II	CATG	9 cut(s)	317, 351, 494, 617, 624, 1772, 1979, 2157, 2225
Hin6I	GCGC	4 cut(s)	473, 1119, 1206, 1454
HinP1I	GCGC	4 cut(s)	473, 1119, 1206, 1454
HindIII	AAGCTT	1 cut(s)	1730
HinfI	GANTC	8 cut(s)	137, 317, 487, 662, 668, 749, 1025, 2254
HpaII	CCGG	2 cut(s)	979, 1406
HphI	GGTGA	6 cut(s)	686, 797, 818, 901, 1301, 2322
Hpy166II	GTNNAC	4 cut(s)	753, 809, 1878, 2011
Hpy8I	GTNNAC	4 cut(s)	753, 809, 1878, 2011
HpyAV	CCTTC	9 cut(s)	565, 712, 797, 1160, 1390, 1772, 1807, 2111, 2194
HpyCH4III	ACNGT	8 cut(s)	256, 542, 768, 857, 1446, 1621, 1719, 2341
HpyCH4IV	ACGT	6 cut(s)	283, 442, 1003, 1049, 1277, 1628
HpyF10VI	GCNNNNNNNGC	6 cut(s)	239, 923, 1200, 1462, 1733, 2291
HpySE526I	ACGT	6 cut(s)	283, 442, 1003, 1049, 1277, 1628
Hsp92II	CATG	9 cut(s)	317, 351, 494, 617, 624, 1772, 1979, 2157, 2225
HspAI	GCGC	4 cut(s)	473, 1119, 1206, 1454
Kzo9I	GATC	6 cut(s)	25, 525, 795, 1040, 1864, 1939
LmnI	GCTCC	3 cut(s)	41, 709, 1673
Lsp1109I	GCAGC	9 cut(s)	254, 901, 938, 1094, 1215, 1723, 1736, 2078, 2278
LweI	GCATC	3 cut(s)	386, 1203, 2078
MaeI	CTAG	5 cut(s)	6, 263, 653, 918, 1811
MaeII	ACGT	6 cut(s)	283, 442, 1003, 1049, 1277, 1628
MaeIII	GTNAC	6 cut(s)	480, 889, 1415, 1756, 2110, 2357
MalI	GATC	6 cut(s)	27, 527, 797, 1042, 1866, 1941
MboI	GATC	6 cut(s)	25, 525, 795, 1040, 1864, 1939
MflI	RGATCY	3 cut(s)	25, 525, 1864
MhlI	GDGCHC	3 cut(s)	1135, 1496, 1793
MlsI	TGGCCA	2 cut(s)	1033, 2220
MluNI	TGGCCA	2 cut(s)	1033, 2220
MlyI	GAGTC	2 cut(s)	662, 758
MmeI	TCCRAC	2 cut(s)	1041, 1410
Mox20I	TGGCCA	2 cut(s)	1033, 2220
MscI	TGGCCA	2 cut(s)	1033, 2220
MseI	TTAA	4 cut(s)	249, 387, 1763, 2346
MslI	CAYNNNNRTG	3 cut(s)	495, 1287, 2060
Msp20I	TGGCCA	2 cut(s)	1033, 2220
MspA1I	CMGCKG	1 cut(s)	929
MspI	CCGG	2 cut(s)	979, 1406
MspR9I	CCNGG	6 cut(s)	509, 560, 979, 1752, 2237, 2322
Mva1269I	GAATGC	1 cut(s)	2306
MvaI	CCWGG	5 cut(s)	509, 560, 1752, 2237, 2322
MvnI	CGCG	2 cut(s)	475, 1121
MwoI	GCNNNNNNNGC	6 cut(s)	239, 923, 1200, 1462, 1733, 2291
NciI	CCSGG	1 cut(s)	979
NdeII	GATC	6 cut(s)	25, 525, 795, 1040, 1864, 1939
NheI	GCTAGC	2 cut(s)	5, 917
NlaIII	CATG	9 cut(s)	317, 351, 494, 617, 624, 1772, 1979, 2157, 2225
NlaIV	GGNNCC	8 cut(s)	27, 465, 686, 1132, 1152, 1582, 1669, 2159
NmuCI	GTSAC	4 cut(s)	480, 889, 1415, 2357
NspI	RCATGY	3 cut(s)	624, 1772, 1979
OliI	CACNNNNGTG	1 cut(s)	1287
PagI	TCATGA	1 cut(s)	490
PciI	ACATGT	1 cut(s)	620
PcsI	WCGNNNNNNNCGW	1 cut(s)	1625
PctI	GAATGC	1 cut(s)	2306
PfeI	GAWTC	6 cut(s)	137, 317, 487, 662, 1025, 2254
PflMI	CCANNNNNTGG	1 cut(s)	2227
PfoI	TCCNGGA	2 cut(s)	507, 558
PinAI	ACCGGT	1 cut(s)	1405
PkrI	GCNGC	9 cut(s)	244, 916, 928, 1084, 1205, 1713, 1726, 2068, 2293
PleI	GAGTC	2 cut(s)	662, 757
PpsI	GAGTC	2 cut(s)	662, 757
Ppu21I	YACGTR	1 cut(s)	1278
PpuMI	RGGWCCY	3 cut(s)	685, 1150, 2158
PscI	ACATGT	1 cut(s)	620
Psp124BI	GAGCTC	2 cut(s)	1496, 1793
Psp5II	RGGWCCY	3 cut(s)	685, 1150, 2158
Psp6I	CCWGG	5 cut(s)	507, 558, 1750, 2235, 2320
PspGI	CCWGG	5 cut(s)	507, 558, 1750, 2235, 2320
PspN4I	GGNNCC	8 cut(s)	27, 465, 686, 1132, 1152, 1582, 1669, 2159
PspPI	GGNCC	5 cut(s)	685, 1150, 1348, 2158, 2264
PspPPI	RGGWCCY	3 cut(s)	685, 1150, 2158
PstI	CTGCAG	1 cut(s)	434
PstNI	CAGNNNCTG	1 cut(s)	665
PsuI	RGATCY	3 cut(s)	25, 525, 1864
PvuII	CAGCTG	1 cut(s)	929
RsaI	GTAC	3 cut(s)	1280, 2097, 2105
RsaNI	GTAC	3 cut(s)	1279, 2096, 2104
RseI	CAYNNNNRTG	3 cut(s)	495, 1287, 2060
SacI	GAGCTC	2 cut(s)	1496, 1793
SaqAI	TTAA	4 cut(s)	249, 387, 1763, 2346
SatI	GCNGC	9 cut(s)	243, 915, 927, 1083, 1204, 1712, 1725, 2067, 2292
Sau3AI	GATC	6 cut(s)	25, 525, 795, 1040, 1864, 1939
Sau96I	GGNCC	5 cut(s)	685, 1150, 1348, 2158, 2264
SchI	GAGTC	2 cut(s)	662, 758
ScrFI	CCNGG	6 cut(s)	509, 560, 979, 1752, 2237, 2322
SduI	GDGCHC	3 cut(s)	1135, 1496, 1793
SfaNI	GCATC	3 cut(s)	386, 1203, 2078
SfcI	CTRYAG	1 cut(s)	430
SinI	GGWCC	4 cut(s)	685, 1150, 1348, 2158
SmiMI	CAYNNNNRTG	3 cut(s)	495, 1287, 2060
SmlI	CTYRAG	2 cut(s)	1478, 1932
SmoI	CTYRAG	2 cut(s)	1478, 1932
SnaBI	TACGTA	1 cut(s)	1278
SspMI	CTAG	5 cut(s)	6, 263, 653, 918, 1811
SstI	GAGCTC	2 cut(s)	1496, 1793
StyD4I	CCNGG	6 cut(s)	507, 558, 977, 1750, 2235, 2320
StyI	CCWWGG	3 cut(s)	1426, 1810, 2267
TaaI	ACNGT	8 cut(s)	256, 542, 768, 857, 1446, 1621, 1719, 2341
TaiI	ACGT	6 cut(s)	286, 445, 1006, 1052, 1280, 1631
TaqI	TCGA	2 cut(s)	418, 1023
TaqII	GACCGA	1 cut(s)	872
TatI	WGTACW	1 cut(s)	2103
TfiI	GAWTC	6 cut(s)	137, 317, 487, 662, 1025, 2254
Tru1I	TTAA	4 cut(s)	249, 387, 1763, 2346
Tru9I	TTAA	4 cut(s)	249, 387, 1763, 2346
TscAI	CASTG	3 cut(s)	489, 771, 1398
TseFI	GTSAC	4 cut(s)	480, 889, 1415, 2357
TseI	GCWGC	9 cut(s)	242, 914, 926, 1082, 1203, 1711, 1724, 2066, 2291
Tsp45I	GTSAC	4 cut(s)	480, 889, 1415, 2357
TspGWI	ACGGA	2 cut(s)	87, 2197
TspRI	CASTG	3 cut(s)	489, 771, 1398
Van91I	CCANNNNNTGG	1 cut(s)	2227
VpaK11BI	GGWCC	4 cut(s)	685, 1150, 1348, 2158
XagI	CCTNNNNNAGG	1 cut(s)	2165
XapI	RAATTY	8 cut(s)	66, 122, 303, 407, 547, 935, 1241, 1739
XceI	RCATGY	3 cut(s)	624, 1772, 1979
XcmI	CCANNNNNNNNNTGG	1 cut(s)	203
XmaJI	CCTAGG	1 cut(s)	1810
XmiI	GTMKAC	1 cut(s)	2010
XspI	CTAG	5 cut(s)	6, 263, 653, 918, 1811

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.