Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0005116

Physical Location & Seq

Genomic Coordinates Forward (+)

26646478 .. 26662052

Gene Structure 15575 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG248500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGAACTTGACACATAATAGAGGGACTGAAATTTGGCGAATTGAGGATTTCCAGCCAGTTCCGTTGCCAAAATCTGAATATGGAAAATTCTATATGGGAGATTCTTATATTGTCTTGCAGACAACACAGAACAAAGGGGGTGCTTATCTCTATGACATCCACTTCTGGATTGGGAAAGATACAAGTCAGGATGAAGCTGGCACAGCAGCTATTAAAACTGTTGAACTAGATACAGCTCTTGGAGGGCGTGCTGTGCAACATAGGGAAATTCAAGGCCATGAATCTGATAAGTTTTTGTCCTACTTCAAACCATGTATTATACCACTGGAGGGGGGTGTTGCATCTGGATTTAAAAAGCCTGAGGAAGAAGAATTTGAAACTCGACTTTATATCTGCAGAGGAAAACGTGTTGTCAGAATGAAGCAGGTTCCTTTTGCGCGTTCGTCACTGAATCATGATGATGTGTTCATCCTGGACAGCCAGAATAAGATCTTTCAGTTCAACGGTGCGAATTCCAATATCCAGGAAAGGGCGAAGGCTTTGGAAGTCATCCAATTTTTGAAAGAAAAGTATCATCATGGGACATGTGATGTTGCAATAGTTGATGATGGGAAGCTAGACACAGAATCTGACTCTGGTGAGTTCTGGGTCCTAATGGGTGGCTTTGCTCCGATTAGCAAGAAGGTTGCCAATGAAGATGATGTCGTTCCTGAGTCCACTCCTGCTACACTGTATAGCATAACTGATGGTGAAGTGAAGATCATAGACGGTGAACTATCCAAATCCTTGCTTGAAAACAACAAATGCTACTTACTGGACTGTGGTTCTGAAGTATTTGTTTGGGTCGGTCGGGTGACACAAGTGGAGGACAGAAAAGCTGCTAGCCAAGCAGCTGAGGAATTTGTTTCTCATCAGAATAGACCAAAATCAACACGAATAACCCGGCTTATTCAAGGTTATGAGACACGTTCATTCAAGTCCAACTTCGATTCTTGGCCATTGGGATCAGCAACGTCTGGTGCTGAGGAGGGAAGAGGAAAAGTAGCAGCTTTGCTGAAGCAACAAGGTGTTGGTGTAAAGGGCGCGACAAAGGGTGCCCCTGTAAATGAAGAGGTCCCACCTTTGCTTGAAGGAGGTGGAAAGATGGAGGTATGGTGCATCAATGGCAGCGCTAAAACCCAATTACCTAAGGAAGATATCGGCAAATTTTTTAGTGGAGATTGCTACATAATTCTTTATACGTACCACTCTGGTGATAGAAAGGATGACTACTTTCTGTGCTGTTGGTTTGGAAAGGATAGTATTGAGGAGGACCAGAAAACTGCTTCTCATTTGGCGACGTCAATTTCCAACTCACTGAAGGGAAGACCGGTTCAGGGTCACATATTCCAAGGTAAAGAGCCACCACAGTTTGTTGCGCTCTTTCAGCCTATGGTTGTTCTCAAGGGTGGCCTGAGCTCTGGGTATAAAAAGTTTGTTGAGGAGAAAGGGTTGGCTGATGAAACTTACACAGCAGAGTGTGTTGCACTCTTTCGGTTATCTGGAACCTCTATTCATAATAACAAAGCCGTGCAAGTTGATGCGGTGGCAACGTCATTGAACTCTACCGAGTGTTTTCTTCTGCAATCTGGCTCCTCAGTTTTTGCTTGGAATGGAAATCAATCCACCATTGAGCAGCAACAGTTAGCAGCAAAGCTTGCAGAATTTCTGAAGCCAGGAGTTACTTTAAAACATGCTAAAGAAGGAACTGAGAGCTCAACCTTCTGGTCTGCCCTAGGAGGGAAACAAAATTACACCAGTAATAAAGTTGCTTCTGAGATTTGCAGAGATCCCCACCTGTTCACATTCTCATTCAACAAAGGAAAGTTTCAGGTGGAAGAAATATACAACTTTACTCAAGATGATCTACTGACAGAGGATGTCCTTATACTGGATACACATGCTGAAGTCTTTGTTTGGGTTGGTCAATGTGTAGACTTGAAAGAAAAACAAAATGCTTTTGAAATTGGCAAGAAATACATTGAGATGGCAGCATCTCTGGATGGGTTGTCTCCTAATGTACCATTGTACAAAGTTACTGAAGGAAATGAACCTCGCTTCTTCACAACATACTTTTCATGGGACCTTGCAAAGGCTAATGTTCAAGGAAACTCATTCCAGAAGAAGGTGTCCGTTCTGTTTGGCCATGCTGTGGAGAGCCAGGAAAAATCTGATGGGAATCAAGGAGGGCCAAGGCAAAGAGCTGAAGCCTTAGCTGCTCTATCATCTGCATTCAATTCTTCCCCTGGAAAATCACCCCCTACGGTAATTAAAGTTGATTGTCACTACCATATACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005884 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009987 GO:0010639 GO:0010817 GO:0015629 GO:0016043 GO:0022607 GO:0030029 GO:0030036 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0031333 GO:0032271 GO:0032272 GO:0032432 GO:0032535 GO:0032879 GO:0032956 GO:0032970 GO:0033043 GO:0040008 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043242 GO:0043244 GO:0043254 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044877 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051014 GO:0051015 GO:0051017 GO:0051049 GO:0051128 GO:0051129 GO:0051493 GO:0051494 GO:0051693 GO:0061572 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:2000012

KEGG Pathways

Metabolic & Signaling

ko04666 ko04810 ko05203 map04666 map04810 map05203

Pfam Domains

Protein Families

Gelsolin VHP

Protein Analysis

779

Amino Acids

86.3

Weight (kDa)

5.69

Isoelectric Point (pI)

38.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gelsolin	PF00626	18 - 99	2.4e-13	Gelsolin repeat
Gelsolin	PF00626	137 - 205	1.1e-11	Gelsolin repeat
Gelsolin	PF00626	258 - 325	5.8e-12	Gelsolin repeat
DUF7904	PF25480	391 - 479	6e-06	Domain of unknown function (DUF7904)
Gelsolin	PF00626	397 - 471	1.1e-08	Gelsolin repeat
Gelsolin	PF00626	520 - 581	1.3e-07	Gelsolin repeat
Gelsolin	PF00626	623 - 701	3.8e-06	Gelsolin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005116)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41740 AT2G41740 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410
fragaria_vesca	FvH4_6g23900 FvH4_6g23900 FvH4_6g23900 FvH4_6g23900
malus_domestica	MD12G1074400.v1.1 MD14G1072600.v1.1
prunus_persica	Prupe.7G059400_v2.0.a1
pyrus_communis	pycom12g06410 pycom14g06250
rosa_chinensis	RchiOBHm_Chr3g0482581
rosa_laevigata	RLG00000023341
rosa_roxburghii	Rroxscaffold_6G00399140
rosa_rugosa	Rorug03G0197000 Rorug03G0197100
rosa_samantha	Rh3AG248500 Rh3BG283600 Rh3DG277400
rosa_wichuraiana	Rw3G022440

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1343
Acc36I	ACCTGC	1 cut(s)	415
AccB1I	GGYRCC	1 cut(s)	1094
AccB7I	CCANNNNNTGG	1 cut(s)	2191
AccI	GTMKAC	1 cut(s)	1974
AccII	CGCG	2 cut(s)	439, 1085
AciI	CCGC	1 cut(s)	1583
AclWI	GGATC	2 cut(s)	1012, 1823
AcoI	YGGCCR	2 cut(s)	995, 2182
AcsI	RAATTY	8 cut(s)	30, 86, 267, 371, 511, 899, 1205, 1703
AcuI	CTGAAG	7 cut(s)	849, 1076, 1379, 1730, 1965, 2100, 2265
AcyI	GRCGYC	1 cut(s)	1340
AfaI	GTAC	3 cut(s)	1244, 2061, 2069
AfeI	AGCGCT	1 cut(s)	1171
AfiI	CCNNNNNNNGG	8 cut(s)	329, 529, 1376, 1779, 1930, 2131, 2164, 2191
AflIII	ACRYGT	3 cut(s)	406, 584, 965
AgeI	ACCGGT	1 cut(s)	1369
AjnI	CCWGG	5 cut(s)	471, 522, 1714, 2199, 2284
AleI	CACNNNNGTG	1 cut(s)	1251
AloI	GAACNNNNNNTCC	2 cut(s)	1356, 1388
Alw21I	GWGCWC	2 cut(s)	1460, 1757
Alw26I	GTCTC	2 cut(s)	956, 2055
AlwI	GGATC	2 cut(s)	1012, 1823
AlwNI	CAGNNNCTG	1 cut(s)	629
Aor51HI	AGCGCT	1 cut(s)	1171
AoxI	GGCC	5 cut(s)	274, 995, 1450, 2182, 2228
ApeKI	GCWGC	9 cut(s)	206, 878, 890, 1046, 1167, 1675, 1688, 2030, 2255
ApoI	RAATTY	8 cut(s)	30, 86, 267, 371, 511, 899, 1205, 1703
AsiGI	ACCGGT	1 cut(s)	1369
AspA2I	CCTAGG	1 cut(s)	1774
AspLEI	GCGC	4 cut(s)	439, 1085, 1172, 1420
AspS9I	GGNCC	5 cut(s)	649, 1114, 1312, 2122, 2228
AsuC2I	CCSGG	1 cut(s)	943
AsuHPI	GGTGA	6 cut(s)	650, 761, 782, 865, 1265, 2286
AsuNHI	GCTAGC	1 cut(s)	881
AvaII	GGWCC	4 cut(s)	649, 1114, 1312, 2122
AvrII	CCTAGG	1 cut(s)	1774
AxyI	CCTNAGG	2 cut(s)	360, 1188
BaeGI	GKGCMC	1 cut(s)	1099
BalI	TGGCCA	2 cut(s)	997, 2184
BanI	GGYRCC	1 cut(s)	1094
BanII	GRGCYC	2 cut(s)	1460, 1757
BbsI	GAAGAC	1 cut(s)	1372
Bbv12I	GWGCWC	2 cut(s)	1460, 1757
BbvCI	CCTCAGC	2 cut(s)	894, 1023
BbvI	GCAGC	9 cut(s)	218, 865, 902, 1058, 1179, 1687, 1700, 2042, 2242
BccI	CCATC	6 cut(s)	602, 740, 1138, 2020, 2036, 2207
BceAI	ACGGC	1 cut(s)	1553
BciT130I	CCWGG	5 cut(s)	473, 524, 1716, 2201, 2286
BciVI	GTATCC	1 cut(s)	1927
BcnI	CCSGG	1 cut(s)	943
BcoDI	GTCTC	2 cut(s)	956, 2055
BfaI	CTAG	4 cut(s)	227, 617, 882, 1775
BfmI	CTRYAG	1 cut(s)	394
BfoI	RGCGCY	1 cut(s)	1173
BfuAI	ACCTGC	1 cut(s)	415
BfuI	GTATCC	1 cut(s)	1927
BglII	AGATCT	1 cut(s)	489
BisI	GCNGC	9 cut(s)	207, 879, 891, 1047, 1168, 1676, 1689, 2031, 2256
BlnI	CCTAGG	1 cut(s)	1774
BlsI	GCNGC	9 cut(s)	208, 880, 892, 1048, 1169, 1677, 1690, 2032, 2257
Bme1390I	CCNGG	6 cut(s)	473, 524, 943, 1716, 2201, 2286
Bme18I	GGWCC	4 cut(s)	649, 1114, 1312, 2122
BmgT120I	GGNCC	5 cut(s)	649, 1114, 1312, 2122, 2228
BmiI	GGNNCC	7 cut(s)	429, 650, 1096, 1116, 1546, 1633, 2123
BmrFI	CCNGG	6 cut(s)	473, 524, 943, 1716, 2201, 2286
BmsI	GCATC	4 cut(s)	350, 1167, 1570, 2042
BmtI	GCTAGC	1 cut(s)	885
BpiI	GAAGAC	1 cut(s)	1372
BpmI	CTGGAG	1 cut(s)	347
Bpu10I	CCTNAGC	4 cut(s)	894, 1023, 1454, 2251
BpuEI	CTTGAG	2 cut(s)	1427, 1881
BpuMI	CCSGG	1 cut(s)	943
BsaAI	YACGTR	1 cut(s)	1242
BsaBI	GATNNNNATC	1 cut(s)	2217
BsaHI	GRCGYC	1 cut(s)	1340
BsaJI	CCNNGG	4 cut(s)	1390, 1774, 2231, 2284
BsaWI	WCCGGW	1 cut(s)	1369
BsaXI	ACNNNNNCTCC	4 cut(s)	1139, 1169, 1475, 1505
Bsc4I	CCNNNNNNNGG	8 cut(s)	329, 529, 1376, 1779, 1930, 2131, 2164, 2191
Bse118I	RCCGGY	1 cut(s)	1369
Bse1I	ACTGG	5 cut(s)	56, 330, 819, 1797, 1935
Bse21I	CCTNAGG	2 cut(s)	360, 1188
Bse8I	GATNNNNATC	1 cut(s)	2217
BseBI	CCWGG	5 cut(s)	473, 524, 1716, 2201, 2286
BseDI	CCNNGG	4 cut(s)	1390, 1774, 2231, 2284
BseGI	GGATG	7 cut(s)	156, 196, 468, 549, 1270, 1924, 2047
BseJI	GATNNNNATC	1 cut(s)	2217
BseLI	CCNNNNNNNGG	8 cut(s)	329, 529, 1376, 1779, 1930, 2131, 2164, 2191
BseMII	CTCAG	8 cut(s)	351, 702, 885, 1014, 1445, 1650, 1740, 1806
BseNI	ACTGG	5 cut(s)	56, 330, 819, 1797, 1935
BseRI	GAGGAG	4 cut(s)	1040, 1322, 1496, 1624
BseSI	GKGCMC	1 cut(s)	1099
BseXI	GCAGC	9 cut(s)	218, 865, 902, 1058, 1179, 1687, 1700, 2042, 2242
Bsh1236I	CGCG	2 cut(s)	439, 1085
Bsh1285I	CGRYCG	1 cut(s)	850
BshFI	GGCC	5 cut(s)	276, 997, 1452, 2184, 2230
BshNI	GGYRCC	1 cut(s)	1094
BshTI	ACCGGT	1 cut(s)	1369
BsiEI	CGRYCG	1 cut(s)	850
BsiHKAI	GWGCWC	2 cut(s)	1460, 1757
BsiSI	CCGG	2 cut(s)	943, 1370
BslFI	GGGAC	4 cut(s)	37, 595, 1100, 2135
BslI	CCNNNNNNNGG	8 cut(s)	329, 529, 1376, 1779, 1930, 2131, 2164, 2191
BsmAI	GTCTC	2 cut(s)	956, 2055
BsmFI	GGGAC	4 cut(s)	37, 595, 1100, 2135
BsmI	GAATGC	1 cut(s)	2270
BsnI	GGCC	5 cut(s)	276, 997, 1452, 2184, 2230
Bsp1286I	GDGCHC	3 cut(s)	1099, 1460, 1757
Bsp1407I	TGTACA	1 cut(s)	2067
Bsp143I	GATC	5 cut(s)	489, 759, 1004, 1828, 1903
BspACI	CCGC	1 cut(s)	1583
BspANI	GGCC	5 cut(s)	276, 997, 1452, 2184, 2230
BspCNI	CTCAG	8 cut(s)	352, 703, 886, 1015, 1446, 1649, 1741, 1807
BspFNI	CGCG	2 cut(s)	439, 1085
BspHI	TCATGA	1 cut(s)	454
BspLI	GGNNCC	7 cut(s)	429, 650, 1096, 1116, 1546, 1633, 2123
BspMAI	CTGCAG	1 cut(s)	398
BspMI	ACCTGC	1 cut(s)	415
BspOI	GCTAGC	1 cut(s)	885
BspPI	GGATC	2 cut(s)	1012, 1823
BspT107I	GGYRCC	1 cut(s)	1094
BsrFI	RCCGGY	1 cut(s)	1369
BsrGI	TGTACA	1 cut(s)	2067
BsrI	ACTGG	5 cut(s)	56, 330, 819, 1797, 1935
BssAI	RCCGGY	1 cut(s)	1369
BssECI	CCNNGG	4 cut(s)	1390, 1774, 2231, 2284
BssMI	GATC	5 cut(s)	489, 759, 1004, 1828, 1903
BssNI	GRCGYC	1 cut(s)	1340
BssT1I	CCWWGG	3 cut(s)	1390, 1774, 2231
Bst2UI	CCWGG	5 cut(s)	473, 524, 1716, 2201, 2286
Bst4CI	ACNGT	8 cut(s)	220, 506, 732, 770, 821, 1410, 1683, 2305
Bst6I	CTCTTC	2 cut(s)	1027, 1104
BstACI	GRCGYC	1 cut(s)	1340
BstAPI	GCANNNNNTGC	1 cut(s)	1697
BstAUI	TGTACA	1 cut(s)	2067
BstBAI	YACGTR	1 cut(s)	1242
BstC8I	GCNNGC	4 cut(s)	199, 249, 883, 1698
BstENI	CCTNNNNNAGG	1 cut(s)	2129
BstF5I	GGATG	7 cut(s)	156, 196, 468, 549, 1270, 1924, 2047
BstFNI	CGCG	2 cut(s)	439, 1085
BstH2I	RGCGCY	1 cut(s)	1173
BstHHI	GCGC	4 cut(s)	439, 1085, 1172, 1420
BstKTI	GATC	5 cut(s)	492, 762, 1007, 1831, 1906
BstMAI	GTCTC	2 cut(s)	956, 2055
BstMBI	GATC	5 cut(s)	489, 759, 1004, 1828, 1903
BstMCI	CGRYCG	1 cut(s)	850
BstMWI	GCNNNNNNNGC	7 cut(s)	203, 253, 887, 1164, 1426, 1697, 2255
BstNI	CCWGG	5 cut(s)	473, 524, 1716, 2201, 2286
BstNSI	RCATGY	3 cut(s)	588, 1736, 1943
BstSCI	CCNGG	6 cut(s)	471, 522, 941, 1714, 2199, 2284
BstSFI	CTRYAG	1 cut(s)	394
BstSLI	GKGCMC	1 cut(s)	1099
BstSNI	TACGTA	1 cut(s)	1242
BstUI	CGCG	2 cut(s)	439, 1085
BstV1I	GCAGC	9 cut(s)	218, 865, 902, 1058, 1179, 1687, 1700, 2042, 2242
BstV2I	GAAGAC	1 cut(s)	1372
BstX2I	RGATCY	2 cut(s)	489, 1828
BstYI	RGATCY	2 cut(s)	489, 1828
Bsu36I	CCTNAGG	2 cut(s)	360, 1188
BsuI	GTATCC	1 cut(s)	1927
BsuRI	GGCC	5 cut(s)	276, 997, 1452, 2184, 2230
BtsCI	GGATG	7 cut(s)	156, 196, 468, 549, 1270, 1924, 2047
BtsIMutI	CAGTG	4 cut(s)	323, 446, 728, 1355
BveI	ACCTGC	1 cut(s)	415
Cac8I	GCNNGC	4 cut(s)	199, 249, 883, 1698
CaiI	CAGNNNCTG	1 cut(s)	629
CciI	TCATGA	1 cut(s)	454
CfoI	GCGC	4 cut(s)	439, 1085, 1172, 1420
Cfr10I	RCCGGY	1 cut(s)	1369
Cfr13I	GGNCC	5 cut(s)	649, 1114, 1312, 2122, 2228
Csp6I	GTAC	3 cut(s)	1243, 2060, 2068
CspAI	ACCGGT	1 cut(s)	1369
CviAII	CATG	9 cut(s)	278, 312, 455, 578, 585, 1733, 1940, 2118, 2186
CviQI	GTAC	3 cut(s)	1243, 2060, 2068
DpnI	GATC	5 cut(s)	491, 761, 1006, 1830, 1905
DpnII	GATC	5 cut(s)	489, 759, 1004, 1828, 1903
DraI	TTTAAA	2 cut(s)	352, 1728
EaeI	YGGCCR	2 cut(s)	995, 2182
Eam1104I	CTCTTC	2 cut(s)	1027, 1104
EarI	CTCTTC	2 cut(s)	1027, 1104
Ecl136II	GAGCTC	2 cut(s)	1458, 1755
Eco105I	TACGTA	1 cut(s)	1242
Eco130I	CCWWGG	3 cut(s)	1390, 1774, 2231
Eco24I	GRGCYC	2 cut(s)	1460, 1757
Eco32I	GATATC	1 cut(s)	1198
Eco47I	GGWCC	4 cut(s)	649, 1114, 1312, 2122
Eco47III	AGCGCT	1 cut(s)	1171
Eco53kI	GAGCTC	2 cut(s)	1458, 1755
Eco57I	CTGAAG	7 cut(s)	849, 1076, 1379, 1730, 1965, 2100, 2265
Eco81I	CCTNAGG	2 cut(s)	360, 1188
EcoICRI	GAGCTC	2 cut(s)	1458, 1755
EcoNI	CCTNNNNNAGG	1 cut(s)	2129
EcoO109I	RGGNCCY	3 cut(s)	649, 1114, 2122
EcoRI	GAATTC	1 cut(s)	511
EcoRII	CCWGG	5 cut(s)	471, 522, 1714, 2199, 2284
EcoRV	GATATC	1 cut(s)	1198
EcoT14I	CCWWGG	3 cut(s)	1390, 1774, 2231
EcoT38I	GRGCYC	2 cut(s)	1460, 1757
ErhI	CCWWGG	3 cut(s)	1390, 1774, 2231
FaeI	CATG	9 cut(s)	281, 315, 458, 581, 588, 1736, 1943, 2121, 2189
FalI	AAGNNNNNCTT	2 cut(s)	968, 1000
FaqI	GGGAC	4 cut(s)	37, 595, 1100, 2135
FatI	CATG	9 cut(s)	277, 311, 454, 577, 584, 1732, 1939, 2117, 2185
FblI	GTMKAC	1 cut(s)	1974
Fnu4HI	GCNGC	9 cut(s)	207, 879, 891, 1047, 1168, 1676, 1689, 2031, 2256
FokI	GGATG	7 cut(s)	143, 203, 455, 536, 1277, 1931, 2054
FriOI	GRGCYC	2 cut(s)	1460, 1757
Fsp4HI	GCNGC	9 cut(s)	207, 879, 891, 1047, 1168, 1676, 1689, 2031, 2256
FspBI	CTAG	4 cut(s)	227, 617, 882, 1775
GlaI	GCGC	4 cut(s)	438, 1084, 1171, 1419
GluI	GCNGC	9 cut(s)	207, 879, 891, 1047, 1168, 1676, 1689, 2031, 2256
GsuI	CTGGAG	1 cut(s)	347
HaeII	RGCGCY	1 cut(s)	1173
HaeIII	GGCC	5 cut(s)	276, 997, 1452, 2184, 2230
HapII	CCGG	2 cut(s)	943, 1370
HhaI	GCGC	4 cut(s)	439, 1085, 1172, 1420
Hin1I	GRCGYC	1 cut(s)	1340
Hin1II	CATG	9 cut(s)	281, 315, 458, 581, 588, 1736, 1943, 2121, 2189
Hin6I	GCGC	4 cut(s)	437, 1083, 1170, 1418
HinP1I	GCGC	4 cut(s)	437, 1083, 1170, 1418
HindIII	AAGCTT	1 cut(s)	1694
HinfI	GANTC	8 cut(s)	101, 281, 451, 626, 632, 713, 989, 2218
HpaII	CCGG	2 cut(s)	943, 1370
HphI	GGTGA	6 cut(s)	650, 761, 782, 865, 1265, 2286
Hpy166II	GTNNAC	4 cut(s)	717, 773, 1842, 1975
Hpy188III	TCNNGA	9 cut(s)	166, 188, 345, 455, 710, 1542, 1898, 2039, 2158
Hpy8I	GTNNAC	4 cut(s)	717, 773, 1842, 1975
Hpy99I	CGWCG	1 cut(s)	1342
HpyAV	CCTTC	8 cut(s)	529, 676, 1124, 1354, 1736, 1771, 2075, 2158
HpyCH4III	ACNGT	8 cut(s)	220, 506, 732, 770, 821, 1410, 1683, 2305
HpyCH4IV	ACGT	6 cut(s)	406, 967, 1013, 1241, 1340, 1592
HpyF10VI	GCNNNNNNNGC	7 cut(s)	203, 253, 887, 1164, 1426, 1697, 2255
HpySE526I	ACGT	6 cut(s)	406, 967, 1013, 1241, 1340, 1592
Hsp92I	GRCGYC	1 cut(s)	1340
Hsp92II	CATG	9 cut(s)	281, 315, 458, 581, 588, 1736, 1943, 2121, 2189
HspAI	GCGC	4 cut(s)	437, 1083, 1170, 1418
Kzo9I	GATC	5 cut(s)	489, 759, 1004, 1828, 1903
LmnI	GCTCC	2 cut(s)	673, 1637
Lsp1109I	GCAGC	9 cut(s)	218, 865, 902, 1058, 1179, 1687, 1700, 2042, 2242
LweI	GCATC	4 cut(s)	350, 1167, 1570, 2042
MaeI	CTAG	4 cut(s)	227, 617, 882, 1775
MaeII	ACGT	6 cut(s)	406, 967, 1013, 1241, 1340, 1592
MaeIII	GTNAC	6 cut(s)	444, 853, 1379, 1720, 2074, 2321
MalI	GATC	5 cut(s)	491, 761, 1006, 1830, 1905
MboI	GATC	5 cut(s)	489, 759, 1004, 1828, 1903
MflI	RGATCY	2 cut(s)	489, 1828
MhlI	GDGCHC	3 cut(s)	1099, 1460, 1757
MlsI	TGGCCA	2 cut(s)	997, 2184
MluNI	TGGCCA	2 cut(s)	997, 2184
MlyI	GAGTC	2 cut(s)	626, 722
MmeI	TCCRAC	2 cut(s)	1005, 1374
Mox20I	TGGCCA	2 cut(s)	997, 2184
MscI	TGGCCA	2 cut(s)	997, 2184
MseI	TTAA	4 cut(s)	213, 351, 1727, 2310
MslI	CAYNNNNRTG	3 cut(s)	459, 1251, 2024
Msp20I	TGGCCA	2 cut(s)	997, 2184
MspA1I	CMGCKG	1 cut(s)	893
MspI	CCGG	2 cut(s)	943, 1370
MspR9I	CCNGG	6 cut(s)	473, 524, 943, 1716, 2201, 2286
Mva1269I	GAATGC	1 cut(s)	2270
MvaI	CCWGG	5 cut(s)	473, 524, 1716, 2201, 2286
MvnI	CGCG	2 cut(s)	439, 1085
MwoI	GCNNNNNNNGC	7 cut(s)	203, 253, 887, 1164, 1426, 1697, 2255
NciI	CCSGG	1 cut(s)	943
NdeII	GATC	5 cut(s)	489, 759, 1004, 1828, 1903
NheI	GCTAGC	1 cut(s)	881
NlaIII	CATG	9 cut(s)	281, 315, 458, 581, 588, 1736, 1943, 2121, 2189
NlaIV	GGNNCC	7 cut(s)	429, 650, 1096, 1116, 1546, 1633, 2123
NmuCI	GTSAC	4 cut(s)	444, 853, 1379, 2321
NspI	RCATGY	3 cut(s)	588, 1736, 1943
OliI	CACNNNNGTG	1 cut(s)	1251
PagI	TCATGA	1 cut(s)	454
PciI	ACATGT	1 cut(s)	584
PctI	GAATGC	1 cut(s)	2270
PfeI	GAWTC	6 cut(s)	101, 281, 451, 626, 989, 2218
PflMI	CCANNNNNTGG	1 cut(s)	2191
PfoI	TCCNGGA	2 cut(s)	471, 522
PinAI	ACCGGT	1 cut(s)	1369
PkrI	GCNGC	9 cut(s)	208, 880, 892, 1048, 1169, 1677, 1690, 2032, 2257
PleI	GAGTC	2 cut(s)	626, 721
PpsI	GAGTC	2 cut(s)	626, 721
Ppu21I	YACGTR	1 cut(s)	1242
PpuMI	RGGWCCY	3 cut(s)	649, 1114, 2122
PscI	ACATGT	1 cut(s)	584
Psp124BI	GAGCTC	2 cut(s)	1460, 1757
Psp5II	RGGWCCY	3 cut(s)	649, 1114, 2122
Psp6I	CCWGG	5 cut(s)	471, 522, 1714, 2199, 2284
PspGI	CCWGG	5 cut(s)	471, 522, 1714, 2199, 2284
PspN4I	GGNNCC	7 cut(s)	429, 650, 1096, 1116, 1546, 1633, 2123
PspPI	GGNCC	5 cut(s)	649, 1114, 1312, 2122, 2228
PspPPI	RGGWCCY	3 cut(s)	649, 1114, 2122
PstI	CTGCAG	1 cut(s)	398
PstNI	CAGNNNCTG	1 cut(s)	629
PsuI	RGATCY	2 cut(s)	489, 1828
PvuII	CAGCTG	1 cut(s)	893
RsaI	GTAC	3 cut(s)	1244, 2061, 2069
RsaNI	GTAC	3 cut(s)	1243, 2060, 2068
RseI	CAYNNNNRTG	3 cut(s)	459, 1251, 2024
SacI	GAGCTC	2 cut(s)	1460, 1757
SaqAI	TTAA	4 cut(s)	213, 351, 1727, 2310
SatI	GCNGC	9 cut(s)	207, 879, 891, 1047, 1168, 1676, 1689, 2031, 2256
Sau3AI	GATC	5 cut(s)	489, 759, 1004, 1828, 1903
Sau96I	GGNCC	5 cut(s)	649, 1114, 1312, 2122, 2228
SchI	GAGTC	2 cut(s)	626, 722
ScrFI	CCNGG	6 cut(s)	473, 524, 943, 1716, 2201, 2286
SduI	GDGCHC	3 cut(s)	1099, 1460, 1757
SfaNI	GCATC	4 cut(s)	350, 1167, 1570, 2042
SfcI	CTRYAG	1 cut(s)	394
SinI	GGWCC	4 cut(s)	649, 1114, 1312, 2122
SmiMI	CAYNNNNRTG	3 cut(s)	459, 1251, 2024
SmlI	CTYRAG	2 cut(s)	1442, 1896
SmoI	CTYRAG	2 cut(s)	1442, 1896
SnaBI	TACGTA	1 cut(s)	1242
SsiI	CCGC	1 cut(s)	1583
SspMI	CTAG	4 cut(s)	227, 617, 882, 1775
SstI	GAGCTC	2 cut(s)	1460, 1757
StyD4I	CCNGG	6 cut(s)	471, 522, 941, 1714, 2199, 2284
StyI	CCWWGG	3 cut(s)	1390, 1774, 2231
TaaI	ACNGT	8 cut(s)	220, 506, 732, 770, 821, 1410, 1683, 2305
TaiI	ACGT	6 cut(s)	409, 970, 1016, 1244, 1343, 1595
TaqI	TCGA	2 cut(s)	382, 987
TaqII	GACCGA	1 cut(s)	836
TatI	WGTACW	1 cut(s)	2067
TfiI	GAWTC	6 cut(s)	101, 281, 451, 626, 989, 2218
Tru1I	TTAA	4 cut(s)	213, 351, 1727, 2310
Tru9I	TTAA	4 cut(s)	213, 351, 1727, 2310
TscAI	CASTG	4 cut(s)	330, 453, 735, 1362
TseFI	GTSAC	4 cut(s)	444, 853, 1379, 2321
TseI	GCWGC	9 cut(s)	206, 878, 890, 1046, 1167, 1675, 1688, 2030, 2255
Tsp45I	GTSAC	4 cut(s)	444, 853, 1379, 2321
TspGWI	ACGGA	2 cut(s)	51, 2161
TspRI	CASTG	4 cut(s)	330, 453, 735, 1362
Van91I	CCANNNNNTGG	1 cut(s)	2191
VpaK11BI	GGWCC	4 cut(s)	649, 1114, 1312, 2122
XagI	CCTNNNNNAGG	1 cut(s)	2129
XapI	RAATTY	8 cut(s)	30, 86, 267, 371, 511, 899, 1205, 1703
XceI	RCATGY	3 cut(s)	588, 1736, 1943
XcmI	CCANNNNNNNNNTGG	1 cut(s)	167
XmaJI	CCTAGG	1 cut(s)	1774
XmiI	GTMKAC	1 cut(s)	1974
XspI	CTAG	4 cut(s)	227, 617, 882, 1775
ZraI	GACGTC	1 cut(s)	1341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.