regulation of actin filament depolymerization
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G41740 AT2G41740 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 |
| fragaria_vesca | FvH4_6g23900 FvH4_6g23900 FvH4_6g23900 FvH4_6g23900 |
| malus_domestica | MD12G1074400.v1.1 MD14G1072600.v1.1 |
| prunus_persica | Prupe.7G059400_v2.0.a1 |
| pyrus_communis | pycom12g06410 pycom14g06250 |
| rosa_chinensis | RchiOBHm_Chr3g0482581 |
| rosa_laevigata | RLG00000023341 |
| rosa_roxburghii | Rroxscaffold_6G00399140 |
| rosa_rugosa | Rorug03G0197000 Rorug03G0197100 |
| rosa_samantha | Rh3AG248500 Rh3BG283600 Rh3DG277400 |
| rosa_wichuraiana | Rw3G022440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2662 |
| Acc36I | ACCTGC | 2 cut(s) | 466, 2662 |
| AccB1I | GGYRCC | 1 cut(s) | 1220 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2248 |
| AccBSI | CCGCTC | 1 cut(s) | 59 |
| AccI | GTMKAC | 1 cut(s) | 2025 |
| AccII | CGCG | 1 cut(s) | 490 |
| AccIII | TCCGGA | 1 cut(s) | 2336 |
| AciI | CCGC | 4 cut(s) | 59, 711, 1634, 2081 |
| AclWI | GGATC | 7 cut(s) | 35, 48, 1063, 1874, 2181, 2383, 2500 |
| AcoI | YGGCCR | 3 cut(s) | 898, 1046, 2239 |
| AcuI | CTGAAG | 8 cut(s) | 765, 1127, 1430, 1514, 2016, 2151, 2316, 2649 |
| AfaI | GTAC | 5 cut(s) | 780, 1072, 1295, 2112, 2737 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 380, 580, 1427, 2215, 2248, 2336, 2758, 2783, 2844 |
| AflIII | ACRYGT | 2 cut(s) | 1290, 1525 |
| AhlI | ACTAGT | 1 cut(s) | 2597 |
| AjiI | CACGTC | 1 cut(s) | 299 |
| AjnI | CCWGG | 4 cut(s) | 522, 573, 1765, 2358 |
| AleI | CACNNNNGTG | 1 cut(s) | 1302 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1407, 1439, 1587, 1619 |
| Alw21I | GWGCWC | 3 cut(s) | 1150, 1511, 1808 |
| Alw26I | GTCTC | 4 cut(s) | 1007, 1547, 2633, 2690 |
| AlwI | GGATC | 7 cut(s) | 35, 48, 1063, 1874, 2181, 2383, 2500 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2516 |
| Ama87I | CYCGRG | 2 cut(s) | 993, 2090 |
| Aor13HI | TCCGGA | 1 cut(s) | 2336 |
| AoxI | GGCC | 6 cut(s) | 325, 765, 898, 1046, 2239, 2356 |
| AspLEI | GCGC | 2 cut(s) | 490, 2521 |
| AspS9I | GGNCC | 8 cut(s) | 633, 700, 1165, 1363, 1489, 2279, 2356, 2390 |
| AsuC2I | CCSGG | 3 cut(s) | 902, 994, 995 |
| AsuHPI | GGTGA | 6 cut(s) | 701, 812, 833, 916, 1316, 2657 |
| AvaI | CYCGRG | 2 cut(s) | 993, 2090 |
| AvaII | GGWCC | 7 cut(s) | 633, 700, 1165, 1363, 1489, 2279, 2390 |
| AxyI | CCTNAGG | 1 cut(s) | 1239 |
| BalI | TGGCCA | 2 cut(s) | 1048, 2241 |
| BamHI | GGATCC | 1 cut(s) | 40 |
| BanI | GGYRCC | 1 cut(s) | 1220 |
| BanII | GRGCYC | 2 cut(s) | 1511, 1808 |
| BbsI | GAAGAC | 1 cut(s) | 1423 |
| Bbv12I | GWGCWC | 3 cut(s) | 1150, 1511, 1808 |
| BbvCI | CCTCAGC | 1 cut(s) | 945 |
| BccI | CCATC | 7 cut(s) | 623, 653, 1057, 1189, 2071, 2338, 2603 |
| BciT130I | CCWGG | 4 cut(s) | 524, 575, 1767, 2360 |
| BcnI | CCSGG | 3 cut(s) | 902, 994, 995 |
| BcoDI | GTCTC | 4 cut(s) | 1007, 1547, 2633, 2690 |
| BcuI | ACTAGT | 1 cut(s) | 2597 |
| BfaI | CTAG | 6 cut(s) | 21, 278, 668, 960, 1826, 2598 |
| BfmI | CTRYAG | 2 cut(s) | 813, 2505 |
| BfuAI | ACCTGC | 2 cut(s) | 466, 2662 |
| BlpI | GCTNAGC | 1 cut(s) | 1807 |
| BmcAI | AGTACT | 1 cut(s) | 2737 |
| Bme1390I | CCNGG | 7 cut(s) | 524, 575, 902, 994, 995, 1767, 2360 |
| Bme18I | GGWCC | 7 cut(s) | 633, 700, 1165, 1363, 1489, 2279, 2390 |
| BmeT110I | CYCGRG | 2 cut(s) | 993, 2090 |
| BmgBI | CACGTC | 1 cut(s) | 299 |
| BmgT120I | GGNCC | 8 cut(s) | 633, 700, 1165, 1363, 1489, 2279, 2356, 2390 |
| BmiI | GGNNCC | 8 cut(s) | 42, 480, 634, 701, 1167, 1222, 1684, 2452 |
| BmrFI | CCNGG | 7 cut(s) | 524, 575, 902, 994, 995, 1767, 2360 |
| BmsI | GCATC | 8 cut(s) | 271, 401, 1621, 1652, 2093, 2554, 2666, 2848 |
| BpiI | GAAGAC | 1 cut(s) | 1423 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 668, 700 |
| Bpu10I | CCTNAGC | 2 cut(s) | 945, 2302 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1807 |
| BpuEI | CTTGAG | 2 cut(s) | 1525, 1932 |
| BpuMI | CCSGG | 3 cut(s) | 902, 994, 995 |
| BsaAI | YACGTR | 1 cut(s) | 1293 |
| BsaJI | CCNNGG | 3 cut(s) | 993, 2282, 2393 |
| BsaWI | WCCGGW | 1 cut(s) | 2336 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1190, 1220, 2243, 2273 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 380, 580, 1427, 2215, 2248, 2336, 2758, 2783, 2844 |
| Bse118I | RCCGGY | 1 cut(s) | 2783 |
| Bse1I | ACTGG | 9 cut(s) | 107, 604, 799, 870, 1421, 1848, 2262, 2647, 2777 |
| Bse21I | CCTNAGG | 1 cut(s) | 1239 |
| Bse3DI | GCAATG | 3 cut(s) | 21, 1134, 2674 |
| BseAI | TCCGGA | 1 cut(s) | 2336 |
| BseBI | CCWGG | 4 cut(s) | 524, 575, 1767, 2360 |
| BseDI | CCNNGG | 3 cut(s) | 993, 2282, 2393 |
| BseGI | GGATG | 9 cut(s) | 247, 519, 1555, 2330, 2345, 2441, 2680, 2713, 2853 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 380, 580, 1427, 2215, 2248, 2336, 2758, 2783, 2844 |
| BseMI | GCAATG | 3 cut(s) | 21, 1134, 2674 |
| BseNI | ACTGG | 9 cut(s) | 107, 604, 799, 870, 1421, 1848, 2262, 2647, 2777 |
| BseRI | GAGGAG | 7 cut(s) | 762, 1091, 1175, 1373, 1547, 1675, 2840 |
| BseYI | CCCAGC | 1 cut(s) | 248 |
| BsgI | GTGCAG | 2 cut(s) | 321, 2723 |
| Bsh1236I | CGCG | 1 cut(s) | 490 |
| BshFI | GGCC | 6 cut(s) | 327, 767, 900, 1048, 2241, 2358 |
| BshNI | GGYRCC | 1 cut(s) | 1220 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1150, 1511, 1808 |
| BsiHKCI | CYCGRG | 2 cut(s) | 993, 2090 |
| BsiSI | CCGG | 4 cut(s) | 901, 994, 2337, 2784 |
| BslFI | GGGAC | 4 cut(s) | 88, 265, 646, 1151 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 380, 580, 1427, 2215, 2248, 2336, 2758, 2783, 2844 |
| BsmAI | GTCTC | 4 cut(s) | 1007, 1547, 2633, 2690 |
| BsmFI | GGGAC | 4 cut(s) | 88, 265, 646, 1151 |
| BsmI | GAATGC | 2 cut(s) | 2321, 2861 |
| BsnI | GGCC | 6 cut(s) | 327, 767, 900, 1048, 2241, 2358 |
| BsoBI | CYCGRG | 2 cut(s) | 993, 2090 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1150, 1511, 1808 |
| Bsp13I | TCCGGA | 1 cut(s) | 2336 |
| Bsp143I | GATC | 7 cut(s) | 40, 1055, 1879, 1954, 2173, 2375, 2492 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1807 |
| BspACI | CCGC | 4 cut(s) | 59, 711, 1634, 2081 |
| BspANI | GGCC | 6 cut(s) | 327, 767, 900, 1048, 2241, 2358 |
| BspEI | TCCGGA | 1 cut(s) | 2336 |
| BspFNI | CGCG | 1 cut(s) | 490 |
| BspHI | TCATGA | 1 cut(s) | 505 |
| BspLI | GGNNCC | 8 cut(s) | 42, 480, 634, 701, 1167, 1222, 1684, 2452 |
| BspMAI | CTGCAG | 1 cut(s) | 2509 |
| BspMI | ACCTGC | 2 cut(s) | 466, 2662 |
| BspPI | GGATC | 7 cut(s) | 35, 48, 1063, 1874, 2181, 2383, 2500 |
| BspT107I | GGYRCC | 1 cut(s) | 1220 |
| BsrBI | CCGCTC | 1 cut(s) | 59 |
| BsrDI | GCAATG | 3 cut(s) | 21, 1134, 2674 |
| BsrFI | RCCGGY | 1 cut(s) | 2783 |
| BsrI | ACTGG | 9 cut(s) | 107, 604, 799, 870, 1421, 1848, 2262, 2647, 2777 |
| BssAI | RCCGGY | 1 cut(s) | 2783 |
| BssECI | CCNNGG | 3 cut(s) | 993, 2282, 2393 |
| BssMI | GATC | 7 cut(s) | 40, 1055, 1879, 1954, 2173, 2375, 2492 |
| BssT1I | CCWWGG | 2 cut(s) | 2282, 2393 |
| Bst2UI | CCWGG | 4 cut(s) | 524, 575, 1767, 2360 |
| Bst4CI | ACNGT | 8 cut(s) | 271, 828, 872, 1352, 1461, 1621, 2191, 2701 |
| Bst6I | CTCTTC | 3 cut(s) | 1078, 2469, 2797 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 1145, 2513, 2516, 2893 |
| BstBAI | YACGTR | 1 cut(s) | 1293 |
| BstC8I | GCNNGC | 1 cut(s) | 1992 |
| BstEII | GGTNACC | 1 cut(s) | 736 |
| BstF5I | GGATG | 9 cut(s) | 247, 519, 1555, 2330, 2345, 2441, 2680, 2713, 2853 |
| BstFNI | CGCG | 1 cut(s) | 490 |
| BstHHI | GCGC | 2 cut(s) | 490, 2521 |
| BstKTI | GATC | 7 cut(s) | 43, 1058, 1882, 1957, 2176, 2378, 2495 |
| BstMAI | GTCTC | 4 cut(s) | 1007, 1547, 2633, 2690 |
| BstMBI | GATC | 7 cut(s) | 40, 1055, 1879, 1954, 2173, 2375, 2492 |
| BstNI | CCWGG | 4 cut(s) | 524, 575, 1767, 2360 |
| BstNSI | RCATGY | 4 cut(s) | 1529, 1787, 1994, 2896 |
| BstPI | GGTNACC | 1 cut(s) | 736 |
| BstSCI | CCNGG | 7 cut(s) | 522, 573, 900, 992, 993, 1765, 2358 |
| BstSFI | CTRYAG | 2 cut(s) | 813, 2505 |
| BstUI | CGCG | 1 cut(s) | 490 |
| BstV2I | GAAGAC | 1 cut(s) | 1423 |
| BstX2I | RGATCY | 2 cut(s) | 40, 1879 |
| BstYI | RGATCY | 2 cut(s) | 40, 1879 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1239 |
| BsuRI | GGCC | 6 cut(s) | 327, 767, 900, 1048, 2241, 2358 |
| BtgZI | GCGATG | 1 cut(s) | 2090 |
| BtrI | CACGTC | 1 cut(s) | 299 |
| BtsCI | GGATG | 9 cut(s) | 247, 519, 1555, 2330, 2345, 2441, 2680, 2713, 2853 |
| BtsI | GCAGTG | 1 cut(s) | 309 |
| BtsIMutI | CAGTG | 9 cut(s) | 309, 497, 528, 741, 1406, 1626, 2187, 2269, 2706 |
| BveI | ACCTGC | 2 cut(s) | 466, 2662 |
| Cac8I | GCNNGC | 1 cut(s) | 1992 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2516 |
| CciI | TCATGA | 1 cut(s) | 505 |
| CfoI | GCGC | 2 cut(s) | 490, 2521 |
| Cfr10I | RCCGGY | 1 cut(s) | 2783 |
| Cfr13I | GGNCC | 8 cut(s) | 633, 700, 1165, 1363, 1489, 2279, 2356, 2390 |
| Cfr9I | CCCGGG | 1 cut(s) | 993 |
| Csp6I | GTAC | 5 cut(s) | 779, 1071, 1294, 2111, 2736 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2245, 2280 |
| CviQI | GTAC | 5 cut(s) | 779, 1071, 1294, 2111, 2736 |
| DpnI | GATC | 7 cut(s) | 42, 1057, 1881, 1956, 2175, 2377, 2494 |
| DpnII | GATC | 7 cut(s) | 40, 1055, 1879, 1954, 2173, 2375, 2492 |
| DraI | TTTAAA | 1 cut(s) | 1779 |
| EaeI | YGGCCR | 3 cut(s) | 898, 1046, 2239 |
| Eam1104I | CTCTTC | 3 cut(s) | 1078, 2469, 2797 |
| EarI | CTCTTC | 3 cut(s) | 1078, 2469, 2797 |
| Ecl136II | GAGCTC | 2 cut(s) | 1509, 1806 |
| Eco130I | CCWWGG | 2 cut(s) | 2282, 2393 |
| Eco24I | GRGCYC | 2 cut(s) | 1511, 1808 |
| Eco32I | GATATC | 1 cut(s) | 1972 |
| Eco47I | GGWCC | 7 cut(s) | 633, 700, 1165, 1363, 1489, 2279, 2390 |
| Eco53kI | GAGCTC | 2 cut(s) | 1509, 1806 |
| Eco57I | CTGAAG | 8 cut(s) | 765, 1127, 1430, 1514, 2016, 2151, 2316, 2649 |
| Eco81I | CCTNAGG | 1 cut(s) | 1239 |
| Eco88I | CYCGRG | 2 cut(s) | 993, 2090 |
| Eco91I | GGTNACC | 1 cut(s) | 736 |
| EcoICRI | GAGCTC | 2 cut(s) | 1509, 1806 |
| EcoO109I | RGGNCCY | 3 cut(s) | 633, 700, 1165 |
| EcoO65I | GGTNACC | 1 cut(s) | 736 |
| EcoRI | GAATTC | 1 cut(s) | 1651 |
| EcoRII | CCWGG | 4 cut(s) | 522, 573, 1765, 2358 |
| EcoRV | GATATC | 1 cut(s) | 1972 |
| EcoT14I | CCWWGG | 2 cut(s) | 2282, 2393 |
| EcoT22I | ATGCAT | 1 cut(s) | 2863 |
| EcoT38I | GRGCYC | 2 cut(s) | 1511, 1808 |
| ErhI | CCWWGG | 2 cut(s) | 2282, 2393 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1019, 1051, 1487, 1519, 2794, 2826 |
| FaqI | GGGAC | 4 cut(s) | 88, 265, 646, 1151 |
| FauI | CCCGC | 1 cut(s) | 52 |
| FblI | GTMKAC | 1 cut(s) | 2025 |
| FokI | GGATG | 9 cut(s) | 254, 506, 1562, 2317, 2332, 2428, 2687, 2720, 2860 |
| FriOI | GRGCYC | 2 cut(s) | 1511, 1808 |
| FspBI | CTAG | 6 cut(s) | 21, 278, 668, 960, 1826, 2598 |
| GlaI | GCGC | 2 cut(s) | 489, 2520 |
| GsaI | CCCAGC | 1 cut(s) | 252 |
| HaeIII | GGCC | 6 cut(s) | 327, 767, 900, 1048, 2241, 2358 |
| HapII | CCGG | 4 cut(s) | 901, 994, 2337, 2784 |
| HhaI | GCGC | 2 cut(s) | 490, 2521 |
| Hin6I | GCGC | 2 cut(s) | 488, 2519 |
| HinP1I | GCGC | 2 cut(s) | 488, 2519 |
| HincII | GTYRAC | 1 cut(s) | 1962 |
| HindII | GTYRAC | 1 cut(s) | 1962 |
| HindIII | AAGCTT | 2 cut(s) | 33, 2409 |
| HinfI | GANTC | 9 cut(s) | 152, 332, 502, 677, 683, 1040, 1770, 2269, 2678 |
| HpaII | CCGG | 4 cut(s) | 901, 994, 2337, 2784 |
| HphI | GGTGA | 6 cut(s) | 701, 812, 833, 916, 1316, 2657 |
| Hpy166II | GTNNAC | 3 cut(s) | 824, 1962, 2026 |
| Hpy8I | GTNNAC | 3 cut(s) | 824, 1962, 2026 |
| HpyCH4III | ACNGT | 8 cut(s) | 271, 828, 872, 1352, 1461, 1621, 2191, 2701 |
| HpyCH4IV | ACGT | 2 cut(s) | 298, 1292 |
| HpySE526I | ACGT | 2 cut(s) | 298, 1292 |
| HspAI | GCGC | 2 cut(s) | 488, 2519 |
| Kpn2I | TCCGGA | 1 cut(s) | 2336 |
| Kzo9I | GATC | 7 cut(s) | 40, 1055, 1879, 1954, 2173, 2375, 2492 |
| LmnI | GCTCC | 5 cut(s) | 56, 557, 724, 1153, 1688 |
| LweI | GCATC | 8 cut(s) | 271, 401, 1621, 1652, 2093, 2554, 2666, 2848 |
| MaeI | CTAG | 6 cut(s) | 21, 278, 668, 960, 1826, 2598 |
| MaeII | ACGT | 2 cut(s) | 298, 1292 |
| MaeIII | GTNAC | 8 cut(s) | 736, 904, 1153, 1430, 1771, 1841, 2125, 2779 |
| MalI | GATC | 7 cut(s) | 42, 1057, 1881, 1956, 2175, 2377, 2494 |
| MbiI | CCGCTC | 1 cut(s) | 59 |
| MboI | GATC | 7 cut(s) | 40, 1055, 1879, 1954, 2173, 2375, 2492 |
| MflI | RGATCY | 2 cut(s) | 40, 1879 |
| MhlI | GDGCHC | 3 cut(s) | 1150, 1511, 1808 |
| MlsI | TGGCCA | 2 cut(s) | 1048, 2241 |
| MluNI | TGGCCA | 2 cut(s) | 1048, 2241 |
| MlyI | GAGTC | 3 cut(s) | 677, 686, 1779 |
| MmeI | TCCRAC | 3 cut(s) | 705, 1056, 1425 |
| Mox20I | TGGCCA | 2 cut(s) | 1048, 2241 |
| Mph1103I | ATGCAT | 1 cut(s) | 2863 |
| MroI | TCCGGA | 1 cut(s) | 2336 |
| MscI | TGGCCA | 2 cut(s) | 1048, 2241 |
| MseI | TTAA | 4 cut(s) | 264, 1778, 2535, 2796 |
| MslI | CAYNNNNRTG | 3 cut(s) | 510, 1302, 2075 |
| Msp20I | TGGCCA | 2 cut(s) | 1048, 2241 |
| MspA1I | CMGCKG | 1 cut(s) | 944 |
| MspI | CCGG | 4 cut(s) | 901, 994, 2337, 2784 |
| MspR9I | CCNGG | 7 cut(s) | 524, 575, 902, 994, 995, 1767, 2360 |
| Mva1269I | GAATGC | 2 cut(s) | 2321, 2861 |
| MvaI | CCWGG | 4 cut(s) | 524, 575, 1767, 2360 |
| MvnI | CGCG | 1 cut(s) | 490 |
| NciI | CCSGG | 3 cut(s) | 902, 994, 995 |
| NdeII | GATC | 7 cut(s) | 40, 1055, 1879, 1954, 2173, 2375, 2492 |
| NlaIV | GGNNCC | 8 cut(s) | 42, 480, 634, 701, 1167, 1222, 1684, 2452 |
| NmuCI | GTSAC | 3 cut(s) | 904, 1430, 1771 |
| NsiI | ATGCAT | 1 cut(s) | 2863 |
| NspI | RCATGY | 4 cut(s) | 1529, 1787, 1994, 2896 |
| OliI | CACNNNNGTG | 1 cut(s) | 1302 |
| PaeI | GCATGC | 1 cut(s) | 1994 |
| PaeR7I | CTCGAG | 1 cut(s) | 2090 |
| PagI | TCATGA | 1 cut(s) | 505 |
| PaqCI | CACCTGC | 1 cut(s) | 2662 |
| PciI | ACATGT | 1 cut(s) | 1525 |
| PctI | GAATGC | 2 cut(s) | 2321, 2861 |
| PfeI | GAWTC | 6 cut(s) | 152, 332, 502, 1040, 2269, 2678 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2248 |
| PfoI | TCCNGGA | 2 cut(s) | 522, 573 |
| PleI | GAGTC | 3 cut(s) | 677, 685, 1778 |
| PpsI | GAGTC | 3 cut(s) | 677, 685, 1778 |
| Ppu21I | YACGTR | 1 cut(s) | 1293 |
| PpuMI | RGGWCCY | 3 cut(s) | 633, 700, 1165 |
| PscI | ACATGT | 1 cut(s) | 1525 |
| Psp124BI | GAGCTC | 2 cut(s) | 1511, 1808 |
| Psp5II | RGGWCCY | 3 cut(s) | 633, 700, 1165 |
| Psp6I | CCWGG | 4 cut(s) | 522, 573, 1765, 2358 |
| PspEI | GGTNACC | 1 cut(s) | 736 |
| PspFI | CCCAGC | 1 cut(s) | 248 |
| PspGI | CCWGG | 4 cut(s) | 522, 573, 1765, 2358 |
| PspN4I | GGNNCC | 8 cut(s) | 42, 480, 634, 701, 1167, 1222, 1684, 2452 |
| PspPI | GGNCC | 8 cut(s) | 633, 700, 1165, 1363, 1489, 2279, 2356, 2390 |
| PspPPI | RGGWCCY | 3 cut(s) | 633, 700, 1165 |
| PstI | CTGCAG | 1 cut(s) | 2509 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2516 |
| PsuI | RGATCY | 2 cut(s) | 40, 1879 |
| PvuII | CAGCTG | 1 cut(s) | 944 |
| RsaI | GTAC | 5 cut(s) | 780, 1072, 1295, 2112, 2737 |
| RsaNI | GTAC | 5 cut(s) | 779, 1071, 1294, 2111, 2736 |
| RseI | CAYNNNNRTG | 3 cut(s) | 510, 1302, 2075 |
| SacI | GAGCTC | 2 cut(s) | 1511, 1808 |
| SaqAI | TTAA | 4 cut(s) | 264, 1778, 2535, 2796 |
| Sau3AI | GATC | 7 cut(s) | 40, 1055, 1879, 1954, 2173, 2375, 2492 |
| Sau96I | GGNCC | 8 cut(s) | 633, 700, 1165, 1363, 1489, 2279, 2356, 2390 |
| ScaI | AGTACT | 1 cut(s) | 2737 |
| SchI | GAGTC | 3 cut(s) | 677, 686, 1779 |
| ScrFI | CCNGG | 7 cut(s) | 524, 575, 902, 994, 995, 1767, 2360 |
| SduI | GDGCHC | 3 cut(s) | 1150, 1511, 1808 |
| SfaNI | GCATC | 8 cut(s) | 271, 401, 1621, 1652, 2093, 2554, 2666, 2848 |
| SfcI | CTRYAG | 2 cut(s) | 813, 2505 |
| Sfr274I | CTCGAG | 1 cut(s) | 2090 |
| SinI | GGWCC | 7 cut(s) | 633, 700, 1165, 1363, 1489, 2279, 2390 |
| SlaI | CTCGAG | 1 cut(s) | 2090 |
| SmaI | CCCGGG | 1 cut(s) | 995 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 510, 1302, 2075 |
| SmlI | CTYRAG | 3 cut(s) | 1504, 1947, 2090 |
| SmoI | CTYRAG | 3 cut(s) | 1504, 1947, 2090 |
| SpeI | ACTAGT | 1 cut(s) | 2597 |
| SphI | GCATGC | 1 cut(s) | 1994 |
| SsiI | CCGC | 4 cut(s) | 59, 711, 1634, 2081 |
| SspMI | CTAG | 6 cut(s) | 21, 278, 668, 960, 1826, 2598 |
| SstI | GAGCTC | 2 cut(s) | 1511, 1808 |
| StyD4I | CCNGG | 7 cut(s) | 522, 573, 900, 992, 993, 1765, 2358 |
| StyI | CCWWGG | 2 cut(s) | 2282, 2393 |
| TaaI | ACNGT | 8 cut(s) | 271, 828, 872, 1352, 1461, 1621, 2191, 2701 |
| TaiI | ACGT | 2 cut(s) | 301, 1295 |
| TaqI | TCGA | 5 cut(s) | 433, 1038, 2091, 2378, 2869 |
| TatI | WGTACW | 2 cut(s) | 778, 2735 |
| TauI | GCSGC | 1 cut(s) | 2084 |
| TfiI | GAWTC | 6 cut(s) | 152, 332, 502, 1040, 2269, 2678 |
| Tru1I | TTAA | 4 cut(s) | 264, 1778, 2535, 2796 |
| Tru9I | TTAA | 4 cut(s) | 264, 1778, 2535, 2796 |
| TscAI | CASTG | 9 cut(s) | 309, 504, 535, 748, 1413, 1626, 2194, 2269, 2706 |
| TseFI | GTSAC | 3 cut(s) | 904, 1430, 1771 |
| Tsp45I | GTSAC | 3 cut(s) | 904, 1430, 1771 |
| TspDTI | ATGAA | 8 cut(s) | 258, 345, 485, 508, 1011, 1595, 2154, 2430 |
| TspGWI | ACGGA | 2 cut(s) | 1562, 1591 |
| TspMI | CCCGGG | 1 cut(s) | 993 |
| TspRI | CASTG | 9 cut(s) | 309, 504, 535, 748, 1413, 1626, 2194, 2269, 2706 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2248 |
| VpaK11BI | GGWCC | 7 cut(s) | 633, 700, 1165, 1363, 1489, 2279, 2390 |
| XceI | RCATGY | 4 cut(s) | 1529, 1787, 1994, 2896 |
| XhoI | CTCGAG | 1 cut(s) | 2090 |
| XmaI | CCCGGG | 1 cut(s) | 993 |
| XmiI | GTMKAC | 1 cut(s) | 2025 |
| XspI | CTAG | 6 cut(s) | 21, 278, 668, 960, 1826, 2598 |
| ZrmI | AGTACT | 1 cut(s) | 2737 |
| Zsp2I | ATGCAT | 1 cut(s) | 2863 |