Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0005116

Physical Location & Seq

Genomic Coordinates Forward (+)

8049982 .. 8062856

Gene Structure 12875 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1072600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2898 bp

ATGTCTAGCTCTGCAAAAGCTTTGGATCCTGCTTTTCAGGGAGCAGGTCAAAGAGTAGGGACTGAAATTTGGCGGATTGAGGACTTCCAACCAGTTCCTTTGCCAAAATCTGAACATGGAAAATTCTATATGGGGGATTCTTATATTGTCTTGCAGACAACACAAAACAAAGGGGGTGCTTATCTTTATGACATACACTTCTGGATTGGGAAAGATACAAGTCAGGATGAAGCTGGGACAGCAGCTATTAAGACCGTTGAACTAGACGCAGTTCTTGGAGGACGTGCAGTGCAACATAGAGAAATTCAAGGCCATGAATCTGACAAATTTTTGTCATATTTCAAACCTTGTATTATACCATTGGAGGGGGGTGTTGCTTCTGGATTTAAAAAGGCTGAGGAAGAGGAATTTGAAACTCGGTTGTATACCTGCAAAGGAAAACGAGTTGTCAGATTGAAGCAGGTTCCTTTTGCGCGTTCCTCACTGAATCATGATGATGTGTTCATCCTGGACACTCAAAACAAGATCTTTCAGTTCAACGGAGCAAATTCTAATATTCAGGAGAGGGCAAAGGCTTTGGAAGTAATCCAGTTTTTGAAAGAAAAGTATCATGATGGAACCTGTGATGTTGCAATAGTTGATGATGGGAAGCTTGATACAGAGTCCGATTCTGGTGAGTTTTGGGTCCTAATGGGTGGTTTTGCTCCAATTGCAAAGAAGGTAACCACTGAAGATGATGTGGTTCCAGAAGCTACTCCTGCTATACTGTATAGCATAACTGACGGTGAAGTGAAGACTGTAGAAGGTGAACTATCCAAATCCTTGCTTGAAAACAACAAATGCTACTTACTGGACTGTGGTTCAGAGGTATTTGTATGGGTCGGCCGGGTGACACAAGTGGAGGACAGAAAATCTGCAAGCCAAGCAGCTGAGGAATTTCTTGCTAGTCAGAATAGACCAAAGTCAACACGAATAACCCGGGTTATTCAAGGTTATGAGACACATTCATTCAAGTCCAACTTCGATTCTTGGCCATTAGGATCAGCAACTTCTGGTACTGAGGAAGGAAGAGGAAAAGTAGCAGCTTTGCTGAAGCAACAAGGTGTTGGTTTAAAGGGCATTGCAAAAGGTGCTCCCGTAAATGAGGAGGTCCCACCTTTGCTAGAAGGAGGTGGAAAGATGGAGGTATGGTGTATCAATGGTGGTGCCAAGACTCCTTTGTCTAAGGAGGATATTGGTAAATTTTACAGTGGAGATTGCTATATCATTCTCTATACTTACCACTCTGGTGATAGAAAAGAAGATTACTTTTTGTGCTGTTGGTTTGGAAAGGATAGTGTTGAGGAGGACCAGAAAACTGCTGCTCATTTGGCTAGCACAATTTCCAACTCGCTGAAGGGAAGACCAGTGCAGGGTCACATATTTCAAGGTAAAGAGCCACCACAGTTAGTAGCACTTTTCCAGCCTATGGTGGTCCTGAAGGGTGGCTTGAGCTCTGGCTATAAGAAATCGGTTGAGGAGAAAGGTCTGATGGACGAAACGTATACAGCAGATTGTGTGGCACTCTTTCGGTTATCTGGAACTTCTGTTCATAACAATAAAGCAGTGCAAGTTGATGCGGTGGCAACATCGTTGAACTCTACTGAGTGCTTCATTCTGCAATCTGGGTCCTCAATGTTTGCCTGGATTGGAAATCAATGCACCATTGAGCAGCAACAGTTAGCAGCAAAACTTGCAGAGTTTTTGAAGCCAGGAGTTACTTTAAAACATGCTAAAGAGGGAACTGAGAGCTCATCCTTCTGGTTTGCTCTAGGAGGGAAGCAAAGTTACAACAGCAATAAAGTTTCTCAGGAGATTGTCAGAGATCCCCACCTGTTCACATTCTCGTTCAACAGAGGAAAGTTTCAGGTAGAGGAAATTTACAACTTCACTCAAGATGATCTGCTGACAGAGGATATCCTTATACTTGATACGCATGCCGAAGTGTTTGTTTGGGTTGGTCAATGTGTAGACTCGAAAGAAAAGCAAAATGCTTTTGAAATTGGCAAGAAATACATAGCGCTGGCAGCATCTCTGGAGGGGTTGGCTCCTAATGTACCATTATACAAAGTTACTGAAGGAAGTGAACCTCGCTTCTTTACAACATACTTTTCATGGGATCTTTCAAAAGCCACTGTTCAAGGAAACTCATTCCTGAAGAAGGTGTCAATACTCTTTGGAATTGGCCATGCTATGGAGGACAAGCCCACTGGGAATCAAGGAGGACCAAGGCAAAGAGCTGAAGCCTTAGCTGCTTTATCATCTGCCTTCAATCCATCCTCTGGAAAGTCACCCCTAACGGGCCAGGATAAGTCCAATGGATCGAGTGAAGGACCGAGGCAAAGAGCAGAAGCTTTAGCCGCTTTATCTTCTGCATTTAATTCATCCTCTGGAAACAAGCCTTCTCTTCCCAAGCCGTCTGCTTCAGGTCGAGGATCACAAAGAGCTGCAGCAGTTGCTGCGCTTTCAAATGTTCTTACAGCTGAAAAGAGTAGGTTAACACCGGATGCTTCTCCTTTGCAAAGCCCTCCCTCAGAAACTAGTGTTTCTGGTCCTCAGGAACTTCCTGAAGTCAAGGAGACAGGTGAAGCTGCACCTGTTTCCGAAGGCAGTGAGGAGGATTCAGAACAAAAGACACTGCAGGACGAGAGTGATAGTGAACGTAGTTGCAGTACTTTCAGTTATGACCAACTGAGGGCTAAATCCGACAATCCTGTAACCGGCATTGATTTTAAGAGAAGAGAGACCTATCTCTCTGATGAGGAGTTTCAGACCATATTTGGGATGCCGAAAGATGCTTTCTATCGACTGCCAAAGTGGAAGCAAGACATGCAGAAGAGGAAAGCTGATTTATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005884 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009987 GO:0010639 GO:0010817 GO:0015629 GO:0016043 GO:0022607 GO:0030029 GO:0030036 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0031333 GO:0032271 GO:0032272 GO:0032432 GO:0032535 GO:0032879 GO:0032956 GO:0032970 GO:0033043 GO:0040008 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043242 GO:0043244 GO:0043254 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044877 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051014 GO:0051015 GO:0051017 GO:0051049 GO:0051128 GO:0051129 GO:0051493 GO:0051494 GO:0051693 GO:0061572 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:2000012

KEGG Pathways

Metabolic & Signaling

ko04666 ko04810 ko05203 map04666 map04810 map05203

Pfam Domains

Protein Families

Gelsolin VHP

Protein Analysis

966

Amino Acids

105.77

Weight (kDa)

5.43

Isoelectric Point (pI)

42.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gelsolin	PF00626	30 - 111	1.5e-12	Gelsolin repeat
Gelsolin	PF00626	150 - 217	1.7e-11	Gelsolin repeat
Gelsolin	PF00626	266 - 337	9.9e-13	Gelsolin repeat
Gelsolin	PF00626	410 - 482	4.5e-09	Gelsolin repeat
Gelsolin	PF00626	532 - 600	3.1e-07	Gelsolin repeat
VHP	PF02209	930 - 965	1.1e-16	Villin headpiece domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005116)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41740 AT2G41740 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410
fragaria_vesca	FvH4_6g23900 FvH4_6g23900 FvH4_6g23900 FvH4_6g23900
malus_domestica	MD12G1074400.v1.1 MD14G1072600.v1.1
prunus_persica	Prupe.7G059400_v2.0.a1
pyrus_communis	pycom12g06410 pycom14g06250
rosa_chinensis	RchiOBHm_Chr3g0482581
rosa_laevigata	RLG00000023341
rosa_roxburghii	Rroxscaffold_6G00399140
rosa_rugosa	Rorug03G0197000 Rorug03G0197100
rosa_samantha	Rh3AG248500 Rh3BG283600 Rh3DG277400
rosa_wichuraiana	Rw3G022440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1219
Acc36I	ACCTGC	3 cut(s)	35, 437, 451
AccB1I	GGYRCC	1 cut(s)	1205
AccB7I	CCANNNNNTGG	3 cut(s)	1468, 2233, 2321
AccI	GTMKAC	3 cut(s)	425, 1544, 2010
AccII	CGCG	1 cut(s)	475
AciI	CCGC	3 cut(s)	73, 1619, 2400
AclWI	GGATC	7 cut(s)	20, 33, 1048, 1859, 2166, 2368, 2482
AcoI	YGGCCR	3 cut(s)	883, 1031, 2224
AcsI	RAATTY	9 cut(s)	66, 122, 303, 326, 407, 547, 935, 1241, 1917
AcuI	CTGAAG	9 cut(s)	750, 1112, 1415, 1499, 2136, 2216, 2301, 2448, 2628
AfaI	GTAC	3 cut(s)	1057, 2097, 2713
AfeI	AGCGCT	1 cut(s)	2061
AhlI	ACTAGT	1 cut(s)	2579
AjiI	CACGTC	1 cut(s)	284
AjnI	CCWGG	4 cut(s)	507, 1682, 1750, 2343
AleI	CACNNNNGTG	1 cut(s)	1287
AloI	GAACNNNNNNTCC	2 cut(s)	1572, 1604
Alw21I	GWGCWC	3 cut(s)	1135, 1496, 1793
Alw26I	GTCTC	3 cut(s)	992, 2612, 2777
AlwI	GGATC	7 cut(s)	20, 33, 1048, 1859, 2166, 2368, 2482
AlwNI	CAGNNNCTG	1 cut(s)	2498
Ama87I	CYCGRG	1 cut(s)	978
Aor51HI	AGCGCT	1 cut(s)	2061
AoxI	GGCC	5 cut(s)	310, 883, 1031, 2224, 2341
ApoI	RAATTY	9 cut(s)	66, 122, 303, 326, 407, 547, 935, 1241, 1917
AspLEI	GCGC	3 cut(s)	475, 2062, 2503
AspS9I	GGNCC	9 cut(s)	685, 1150, 1348, 1474, 1668, 2264, 2341, 2372, 2591
AsuC2I	CCSGG	3 cut(s)	887, 979, 980
AsuHPI	GGTGA	7 cut(s)	686, 797, 818, 901, 1301, 2322, 2636
AsuNHI	GCTAGC	1 cut(s)	1373
AvaI	CYCGRG	1 cut(s)	978
AvaII	GGWCC	8 cut(s)	685, 1150, 1348, 1474, 1668, 2264, 2372, 2591
AxyI	CCTNAGG	1 cut(s)	2595
BalI	TGGCCA	2 cut(s)	1033, 2226
BamHI	GGATCC	1 cut(s)	25
BanI	GGYRCC	1 cut(s)	1205
BanII	GRGCYC	2 cut(s)	1496, 1793
BarI	GAAGNNNNNNTAC	2 cut(s)	1811, 1843
BbsI	GAAGAC	2 cut(s)	800, 1408
Bbv12I	GWGCWC	3 cut(s)	1135, 1496, 1793
BbvCI	CCTCAGC	2 cut(s)	396, 930
BccI	CCATC	5 cut(s)	608, 638, 1174, 1525, 2323
BceAI	ACGGC	1 cut(s)	2440
BciT130I	CCWGG	4 cut(s)	509, 1684, 1752, 2345
BcnI	CCSGG	3 cut(s)	887, 979, 980
BcoDI	GTCTC	3 cut(s)	992, 2612, 2777
BcuI	ACTAGT	1 cut(s)	2579
BfaI	CTAG	8 cut(s)	6, 263, 945, 1163, 1374, 1811, 2580, 2896
BfmI	CTRYAG	3 cut(s)	798, 2487, 2678
BfoI	RGCGCY	1 cut(s)	2063
BfuAI	ACCTGC	3 cut(s)	35, 437, 451
BglII	AGATCT	1 cut(s)	525
BmcAI	AGTACT	1 cut(s)	2713
Bme1390I	CCNGG	7 cut(s)	509, 887, 979, 980, 1684, 1752, 2345
Bme18I	GGWCC	8 cut(s)	685, 1150, 1348, 1474, 1668, 2264, 2372, 2591
BmeT110I	CYCGRG	1 cut(s)	978
BmgBI	CACGTC	1 cut(s)	284
BmgT120I	GGNCC	9 cut(s)	685, 1150, 1348, 1474, 1668, 2264, 2341, 2372, 2591
BmiI	GGNNCC	9 cut(s)	27, 465, 619, 686, 744, 1152, 1207, 1669, 2088
BmrFI	CCNGG	7 cut(s)	509, 887, 979, 980, 1684, 1752, 2345
BmrI	ACTGGG	1 cut(s)	2259
BmsI	GCATC	5 cut(s)	1606, 2078, 2536, 2814, 2824
BmtI	GCTAGC	1 cut(s)	1377
BmuI	ACTGGG	1 cut(s)	2259
BoxI	GACNNNNGTC	1 cut(s)	961
BpiI	GAAGAC	2 cut(s)	800, 1408
BpmI	CTGGAG	1 cut(s)	2096
Bpu10I	CCTNAGC	3 cut(s)	396, 930, 2287
BpuEI	CTTGAG	2 cut(s)	1510, 1917
BpuMI	CCSGG	3 cut(s)	887, 979, 980
BsaI	GGTCTC	1 cut(s)	2777
BsaJI	CCNNGG	3 cut(s)	978, 2267, 2375
BsaWI	WCCGGW	1 cut(s)	2542
BsaXI	ACNNNNNCTCC	2 cut(s)	1175, 1205
Bse118I	RCCGGY	1 cut(s)	2759
Bse1I	ACTGG	5 cut(s)	92, 589, 855, 1406, 2254
Bse21I	CCTNAGG	1 cut(s)	2595
Bse3DI	GCAATG	1 cut(s)	1119
BseBI	CCWGG	4 cut(s)	509, 1684, 1752, 2345
BseDI	CCNNGG	3 cut(s)	978, 2267, 2375
BseGI	GGATG	7 cut(s)	232, 504, 1793, 2315, 2423, 2551, 2829
BseMI	GCAATG	1 cut(s)	1119
BseMII	CTCAG	9 cut(s)	387, 921, 1050, 1635, 1776, 1862, 2586, 2609, 2723
BseNI	ACTGG	5 cut(s)	92, 589, 855, 1406, 2254
BseRI	GAGGAG	5 cut(s)	1160, 1358, 1532, 2669, 2816
BseX3I	CGGCCG	1 cut(s)	883
BseYI	CCCAGC	1 cut(s)	233
BsgI	GTGCAG	3 cut(s)	306, 1430, 2616
Bsh1236I	CGCG	1 cut(s)	475
Bsh1285I	CGRYCG	1 cut(s)	886
BshFI	GGCC	5 cut(s)	312, 885, 1033, 2226, 2343
BshNI	GGYRCC	1 cut(s)	1205
BsiEI	CGRYCG	1 cut(s)	886
BsiHKAI	GWGCWC	3 cut(s)	1135, 1496, 1793
BsiHKCI	CYCGRG	1 cut(s)	978
BsiSI	CCGG	4 cut(s)	886, 979, 2543, 2760
BslFI	GGGAC	3 cut(s)	73, 250, 1136
BsmAI	GTCTC	3 cut(s)	992, 2612, 2777
BsmFI	GGGAC	3 cut(s)	73, 250, 1136
BsnI	GGCC	5 cut(s)	312, 885, 1033, 2226, 2343
Bso31I	GGTCTC	1 cut(s)	2777
BsoBI	CYCGRG	1 cut(s)	978
Bsp1286I	GDGCHC	3 cut(s)	1135, 1496, 1793
Bsp143I	GATC	8 cut(s)	25, 525, 1040, 1864, 1939, 2158, 2360, 2474
BspACI	CCGC	3 cut(s)	73, 1619, 2400
BspANI	GGCC	5 cut(s)	312, 885, 1033, 2226, 2343
BspCNI	CTCAG	9 cut(s)	388, 922, 1051, 1636, 1777, 1861, 2585, 2608, 2724
BspFNI	CGCG	1 cut(s)	475
BspHI	TCATGA	2 cut(s)	490, 610
BspLI	GGNNCC	9 cut(s)	27, 465, 619, 686, 744, 1152, 1207, 1669, 2088
BspMAI	CTGCAG	2 cut(s)	2491, 2682
BspMI	ACCTGC	3 cut(s)	35, 437, 451
BspOI	GCTAGC	1 cut(s)	1377
BspPI	GGATC	7 cut(s)	20, 33, 1048, 1859, 2166, 2368, 2482
BspT107I	GGYRCC	1 cut(s)	1205
BspTNI	GGTCTC	1 cut(s)	2777
BsrDI	GCAATG	1 cut(s)	1119
BsrFI	RCCGGY	1 cut(s)	2759
BsrI	ACTGG	5 cut(s)	92, 589, 855, 1406, 2254
BssAI	RCCGGY	1 cut(s)	2759
BssECI	CCNNGG	3 cut(s)	978, 2267, 2375
BssMI	GATC	8 cut(s)	25, 525, 1040, 1864, 1939, 2158, 2360, 2474
BssNAI	GTATAC	2 cut(s)	426, 1545
BssT1I	CCWWGG	1 cut(s)	2267
Bst1107I	GTATAC	2 cut(s)	426, 1545
Bst2UI	CCWGG	4 cut(s)	509, 1684, 1752, 2345
Bst4CI	ACNGT	9 cut(s)	256, 768, 785, 799, 857, 1250, 1446, 1719, 2176
Bst6I	CTCTTC	5 cut(s)	396, 1063, 2451, 2773, 2870
BstAPI	GCANNNNNTGC	5 cut(s)	1130, 1733, 2495, 2498, 2869
BstC8I	GCNNGC	4 cut(s)	919, 1375, 1977, 2064
BstEII	GGTNACC	1 cut(s)	721
BstENI	CCTNNNNNAGG	1 cut(s)	2198
BstF5I	GGATG	7 cut(s)	232, 504, 1793, 2315, 2423, 2551, 2829
BstFNI	CGCG	1 cut(s)	475
BstH2I	RGCGCY	1 cut(s)	2063
BstHHI	GCGC	3 cut(s)	475, 2062, 2503
BstKTI	GATC	8 cut(s)	28, 528, 1043, 1867, 1942, 2161, 2363, 2477
BstMAI	GTCTC	3 cut(s)	992, 2612, 2777
BstMBI	GATC	8 cut(s)	25, 525, 1040, 1864, 1939, 2158, 2360, 2474
BstMCI	CGRYCG	1 cut(s)	886
BstNI	CCWGG	4 cut(s)	509, 1684, 1752, 2345
BstNSI	RCATGY	3 cut(s)	1772, 1979, 2872
BstPAI	GACNNNNGTC	1 cut(s)	961
BstPI	GGTNACC	1 cut(s)	721
BstSCI	CCNGG	7 cut(s)	507, 885, 977, 978, 1682, 1750, 2343
BstSFI	CTRYAG	3 cut(s)	798, 2487, 2678
BstUI	CGCG	1 cut(s)	475
BstV2I	GAAGAC	2 cut(s)	800, 1408
BstX2I	RGATCY	4 cut(s)	25, 525, 1864, 2158
BstYI	RGATCY	4 cut(s)	25, 525, 1864, 2158
BstZ17I	GTATAC	2 cut(s)	426, 1545
BstZI	CGGCCG	1 cut(s)	883
Bsu36I	CCTNAGG	1 cut(s)	2595
BsuRI	GGCC	5 cut(s)	312, 885, 1033, 2226, 2343
BtrI	CACGTC	1 cut(s)	284
BtsCI	GGATG	7 cut(s)	232, 504, 1793, 2315, 2423, 2551, 2829
BtsI	GCAGTG	4 cut(s)	294, 1611, 2656, 2675
BveI	ACCTGC	3 cut(s)	35, 437, 451
Cac8I	GCNNGC	4 cut(s)	919, 1375, 1977, 2064
CaiI	CAGNNNCTG	1 cut(s)	2498
CciI	TCATGA	2 cut(s)	490, 610
CfoI	GCGC	3 cut(s)	475, 2062, 2503
Cfr10I	RCCGGY	1 cut(s)	2759
Cfr13I	GGNCC	9 cut(s)	685, 1150, 1348, 1474, 1668, 2264, 2341, 2372, 2591
Cfr9I	CCCGGG	1 cut(s)	978
CseI	GACGC	1 cut(s)	275
Csp6I	GTAC	3 cut(s)	1056, 2096, 2712
CviAII	CATG	9 cut(s)	116, 314, 491, 611, 1769, 1976, 2154, 2228, 2869
CviQI	GTAC	3 cut(s)	1056, 2096, 2712
DpnI	GATC	8 cut(s)	27, 527, 1042, 1866, 1941, 2160, 2362, 2476
DpnII	GATC	8 cut(s)	25, 525, 1040, 1864, 1939, 2158, 2360, 2474
DraI	TTTAAA	3 cut(s)	388, 1113, 1764
DrdI	GACNNNNNNGTC	1 cut(s)	1219
DseDI	GACNNNNNNGTC	1 cut(s)	1219
EaeI	YGGCCR	3 cut(s)	883, 1031, 2224
EagI	CGGCCG	1 cut(s)	883
Eam1104I	CTCTTC	5 cut(s)	396, 1063, 2451, 2773, 2870
EarI	CTCTTC	5 cut(s)	396, 1063, 2451, 2773, 2870
EciI	GGCGGA	1 cut(s)	88
Ecl136II	GAGCTC	2 cut(s)	1494, 1791
EclXI	CGGCCG	1 cut(s)	883
Eco130I	CCWWGG	1 cut(s)	2267
Eco24I	GRGCYC	2 cut(s)	1496, 1793
Eco31I	GGTCTC	1 cut(s)	2777
Eco32I	GATATC	1 cut(s)	1957
Eco47I	GGWCC	8 cut(s)	685, 1150, 1348, 1474, 1668, 2264, 2372, 2591
Eco47III	AGCGCT	1 cut(s)	2061
Eco52I	CGGCCG	1 cut(s)	883
Eco53kI	GAGCTC	2 cut(s)	1494, 1791
Eco57I	CTGAAG	9 cut(s)	750, 1112, 1415, 1499, 2136, 2216, 2301, 2448, 2628
Eco81I	CCTNAGG	1 cut(s)	2595
Eco88I	CYCGRG	1 cut(s)	978
Eco91I	GGTNACC	1 cut(s)	721
EcoICRI	GAGCTC	2 cut(s)	1494, 1791
EcoNI	CCTNNNNNAGG	1 cut(s)	2198
EcoO109I	RGGNCCY	3 cut(s)	685, 1150, 1668
EcoO65I	GGTNACC	1 cut(s)	721
EcoRII	CCWGG	4 cut(s)	507, 1682, 1750, 2343
EcoRV	GATATC	1 cut(s)	1957
EcoT14I	CCWWGG	1 cut(s)	2267
EcoT38I	GRGCYC	2 cut(s)	1496, 1793
ErhI	CCWWGG	1 cut(s)	2267
FaeI	CATG	9 cut(s)	119, 317, 494, 614, 1772, 1979, 2157, 2231, 2872
FalI	AAGNNNNNCTT	4 cut(s)	1004, 1036, 1472, 1504
FaqI	GGGAC	3 cut(s)	73, 250, 1136
FatI	CATG	9 cut(s)	115, 313, 490, 610, 1768, 1975, 2153, 2227, 2868
FblI	GTMKAC	3 cut(s)	425, 1544, 2010
FokI	GGATG	7 cut(s)	239, 491, 1780, 2302, 2410, 2558, 2836
FriOI	GRGCYC	2 cut(s)	1496, 1793
FspBI	CTAG	8 cut(s)	6, 263, 945, 1163, 1374, 1811, 2580, 2896
GlaI	GCGC	3 cut(s)	474, 2061, 2502
GsaI	CCCAGC	1 cut(s)	237
GsuI	CTGGAG	1 cut(s)	2096
HaeII	RGCGCY	1 cut(s)	2063
HaeIII	GGCC	5 cut(s)	312, 885, 1033, 2226, 2343
HapII	CCGG	4 cut(s)	886, 979, 2543, 2760
HgaI	GACGC	1 cut(s)	275
HhaI	GCGC	3 cut(s)	475, 2062, 2503
Hin1II	CATG	9 cut(s)	119, 317, 494, 614, 1772, 1979, 2157, 2231, 2872
Hin6I	GCGC	3 cut(s)	473, 2060, 2501
HinP1I	GCGC	3 cut(s)	473, 2060, 2501
HincII	GTYRAC	2 cut(s)	966, 2538
HindII	GTYRAC	2 cut(s)	966, 2538
HindIII	AAGCTT	3 cut(s)	18, 650, 2391
HpaI	GTTAAC	1 cut(s)	2538
HpaII	CCGG	4 cut(s)	886, 979, 2543, 2760
HphI	GGTGA	7 cut(s)	686, 797, 818, 901, 1301, 2322, 2636
Hpy166II	GTNNAC	9 cut(s)	426, 809, 966, 1545, 1878, 2011, 2126, 2538, 2699
Hpy8I	GTNNAC	9 cut(s)	426, 809, 966, 1545, 1878, 2011, 2126, 2538, 2699
HpyCH4III	ACNGT	9 cut(s)	256, 768, 785, 799, 857, 1250, 1446, 1719, 2176
HpyCH4IV	ACGT	3 cut(s)	283, 1541, 2701
HpySE526I	ACGT	3 cut(s)	283, 1541, 2701
Hsp92II	CATG	9 cut(s)	119, 317, 494, 614, 1772, 1979, 2157, 2231, 2872
HspAI	GCGC	3 cut(s)	473, 2060, 2501
KspAI	GTTAAC	1 cut(s)	2538
Kzo9I	GATC	8 cut(s)	25, 525, 1040, 1864, 1939, 2158, 2360, 2474
LmnI	GCTCC	5 cut(s)	41, 542, 709, 1138, 2092
LweI	GCATC	5 cut(s)	1606, 2078, 2536, 2814, 2824
MaeI	CTAG	8 cut(s)	6, 263, 945, 1163, 1374, 1811, 2580, 2896
MaeII	ACGT	3 cut(s)	283, 1541, 2701
MaeIII	GTNAC	8 cut(s)	721, 889, 1415, 1756, 1826, 2110, 2328, 2755
MalI	GATC	8 cut(s)	27, 527, 1042, 1866, 1941, 2160, 2362, 2476
MboI	GATC	8 cut(s)	25, 525, 1040, 1864, 1939, 2158, 2360, 2474
MfeI	CAATTG	1 cut(s)	708
MflI	RGATCY	4 cut(s)	25, 525, 1864, 2158
MhlI	GDGCHC	3 cut(s)	1135, 1496, 1793
MlsI	TGGCCA	2 cut(s)	1033, 2226
MluNI	TGGCCA	2 cut(s)	1033, 2226
MlyI	GAGTC	3 cut(s)	671, 1207, 2006
MmeI	TCCRAC	4 cut(s)	112, 1041, 1410, 2769
Mox20I	TGGCCA	2 cut(s)	1033, 2226
MscI	TGGCCA	2 cut(s)	1033, 2226
MseI	TTAA	7 cut(s)	249, 387, 1112, 1763, 2418, 2537, 2772
MslI	CAYNNNNRTG	2 cut(s)	495, 1287
Msp20I	TGGCCA	2 cut(s)	1033, 2226
MspA1I	CMGCKG	2 cut(s)	929, 2522
MspI	CCGG	4 cut(s)	886, 979, 2543, 2760
MspR9I	CCNGG	7 cut(s)	509, 887, 979, 980, 1684, 1752, 2345
MunI	CAATTG	1 cut(s)	708
MvaI	CCWGG	4 cut(s)	509, 1684, 1752, 2345
MvnI	CGCG	1 cut(s)	475
NciI	CCSGG	3 cut(s)	887, 979, 980
NdeII	GATC	8 cut(s)	25, 525, 1040, 1864, 1939, 2158, 2360, 2474
NheI	GCTAGC	1 cut(s)	1373
NlaIII	CATG	9 cut(s)	119, 317, 494, 614, 1772, 1979, 2157, 2231, 2872
NlaIV	GGNNCC	9 cut(s)	27, 465, 619, 686, 744, 1152, 1207, 1669, 2088
NmuCI	GTSAC	3 cut(s)	889, 1415, 2328
NspI	RCATGY	3 cut(s)	1772, 1979, 2872
OliI	CACNNNNGTG	1 cut(s)	1287
PaeI	GCATGC	1 cut(s)	1979
PagI	TCATGA	2 cut(s)	490, 610
PfeI	GAWTC	7 cut(s)	137, 317, 487, 668, 1025, 2254, 2660
PflMI	CCANNNNNTGG	3 cut(s)	1468, 2233, 2321
PfoI	TCCNGGA	1 cut(s)	507
PleI	GAGTC	3 cut(s)	670, 1207, 2006
PpsI	GAGTC	3 cut(s)	670, 1207, 2006
PpuMI	RGGWCCY	3 cut(s)	685, 1150, 1668
PshAI	GACNNNNGTC	1 cut(s)	961
Psp124BI	GAGCTC	2 cut(s)	1496, 1793
Psp5II	RGGWCCY	3 cut(s)	685, 1150, 1668
Psp6I	CCWGG	4 cut(s)	507, 1682, 1750, 2343
PspEI	GGTNACC	1 cut(s)	721
PspFI	CCCAGC	1 cut(s)	233
PspGI	CCWGG	4 cut(s)	507, 1682, 1750, 2343
PspN4I	GGNNCC	9 cut(s)	27, 465, 619, 686, 744, 1152, 1207, 1669, 2088
PspPI	GGNCC	9 cut(s)	685, 1150, 1348, 1474, 1668, 2264, 2341, 2372, 2591
PspPPI	RGGWCCY	3 cut(s)	685, 1150, 1668
PstI	CTGCAG	2 cut(s)	2491, 2682
PstNI	CAGNNNCTG	1 cut(s)	2498
PsuI	RGATCY	4 cut(s)	25, 525, 1864, 2158
PvuII	CAGCTG	2 cut(s)	929, 2522
RsaI	GTAC	3 cut(s)	1057, 2097, 2713
RsaNI	GTAC	3 cut(s)	1056, 2096, 2712
RseI	CAYNNNNRTG	2 cut(s)	495, 1287
SacI	GAGCTC	2 cut(s)	1496, 1793
SaqAI	TTAA	7 cut(s)	249, 387, 1112, 1763, 2418, 2537, 2772
Sau3AI	GATC	8 cut(s)	25, 525, 1040, 1864, 1939, 2158, 2360, 2474
Sau96I	GGNCC	9 cut(s)	685, 1150, 1348, 1474, 1668, 2264, 2341, 2372, 2591
ScaI	AGTACT	1 cut(s)	2713
SchI	GAGTC	3 cut(s)	671, 1207, 2006
ScrFI	CCNGG	7 cut(s)	509, 887, 979, 980, 1684, 1752, 2345
SduI	GDGCHC	3 cut(s)	1135, 1496, 1793
SfaNI	GCATC	5 cut(s)	1606, 2078, 2536, 2814, 2824
SfcI	CTRYAG	3 cut(s)	798, 2487, 2678
SinI	GGWCC	8 cut(s)	685, 1150, 1348, 1474, 1668, 2264, 2372, 2591
SmaI	CCCGGG	1 cut(s)	980
SmiMI	CAYNNNNRTG	2 cut(s)	495, 1287
SmlI	CTYRAG	2 cut(s)	1489, 1932
SmoI	CTYRAG	2 cut(s)	1489, 1932
SpeI	ACTAGT	1 cut(s)	2579
SphI	GCATGC	1 cut(s)	1979
SsiI	CCGC	3 cut(s)	73, 1619, 2400
SspI	AATATT	1 cut(s)	556
SspMI	CTAG	8 cut(s)	6, 263, 945, 1163, 1374, 1811, 2580, 2896
SstI	GAGCTC	2 cut(s)	1496, 1793
StyD4I	CCNGG	7 cut(s)	507, 885, 977, 978, 1682, 1750, 2343
StyI	CCWWGG	1 cut(s)	2267
TaaI	ACNGT	9 cut(s)	256, 768, 785, 799, 857, 1250, 1446, 1719, 2176
TaiI	ACGT	3 cut(s)	286, 1544, 2704
TaqI	TCGA	5 cut(s)	1023, 2015, 2363, 2470, 2845
TaqII	GACCGA	1 cut(s)	2389
TatI	WGTACW	1 cut(s)	2711
TauI	GCSGC	1 cut(s)	2402
TfiI	GAWTC	7 cut(s)	137, 317, 487, 668, 1025, 2254, 2660
Tru1I	TTAA	7 cut(s)	249, 387, 1112, 1763, 2418, 2537, 2772
Tru9I	TTAA	7 cut(s)	249, 387, 1112, 1763, 2418, 2537, 2772
TseFI	GTSAC	3 cut(s)	889, 1415, 2328
Tsp45I	GTSAC	3 cut(s)	889, 1415, 2328
TspDTI	ATGAA	8 cut(s)	243, 330, 493, 996, 1580, 1642, 2142, 2412
TspGWI	ACGGA	1 cut(s)	555
TspMI	CCCGGG	1 cut(s)	978
Van91I	CCANNNNNTGG	3 cut(s)	1468, 2233, 2321
VpaK11BI	GGWCC	8 cut(s)	685, 1150, 1348, 1474, 1668, 2264, 2372, 2591
XagI	CCTNNNNNAGG	1 cut(s)	2198
XapI	RAATTY	9 cut(s)	66, 122, 303, 326, 407, 547, 935, 1241, 1917
XceI	RCATGY	3 cut(s)	1772, 1979, 2872
XmaI	CCCGGG	1 cut(s)	978
XmiI	GTMKAC	3 cut(s)	425, 1544, 2010
XspI	CTAG	8 cut(s)	6, 263, 945, 1163, 1374, 1811, 2580, 2896
ZrmI	AGTACT	1 cut(s)	2713

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.