FvH4_6g26480

DNA excision repair protein ERCC-6-like 2

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
20238635 .. 20245500
6866 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g26480.t1

Sequence Viewer

Length: 2550 bp
ATGTCTCTCCGAGCCTTCAAAGAAAGCCTGAAACCGTGCCAGAACTCATCACTCCCGGCCTCCACCCAAACACAGTCGTCGTCGCAAATCCCTAGAAAGCCCCCCAAGTCGTCTCTGGCTCAGCAGCTCCTCAGGCTGCAGGACCCTGTCTCTCGTCCCCCACCGCCACCGCCACTGCCGCCAGTAGAGAAGGACGATGACGAGGACGAGCCTGAACCACTGGGATGTTCCGGGACTGGTAAAGTATTTGACAACACAGGACCCTATGAGCCCTTGCTCCTGTCCTCCCCCGGTGAACTTCCTGTAATCCAGGTTCCTGCATCCATTAACTGCAGGTTGCTTCTACATCAGAGAGAGGGAGTAAAGTTTCTTTACAGAATATACAAGAACAACCATGGAGGGGTTCTTGGAGATGATATGGGACTAGGCAAAACCATTCAAACAATTGCGTTCTTGGCTGCTGTGTTTGGAAAAGATGGCGATCGCATTGATTCCACAATTTCAAAGAAAAGTGACATAGCAGAGCGAAACCCTGTTCTCATAGTTTGCCCCAGTTCAGTTATTCACAACTGGGAGAGCGAATTTTCTAAGTGGTCTAACTTTAGTGTTGCTGTTTACCATGGTGCAAATCGTGATTTGATTTATGATAAACTCGAAGCTCGCGGAGTTGAGATACTTATCACGAGCTTTGACACATACAGAATTTGTGGCAGCCAGTTATCAGGTGTTAATTGGGAGGTTGTTGTTGTGGATGAGGCACATCGTCTTAAGAATGAAAAATCAAAGCTCTACCTAGCATGTCTAGAATTTAGAACGTTGAAACGAATTGGTCTCACTGGAACTATGATGCAGAACAAAATCATGGAATTGTTTAATCTCTTTGACTGGGTTGCACCTGGATCCTTGGGAACACGGGAGCATTTTCGGGAGTTTTATGATGAACCTCTCAAACATGGCCAAAGATCAACTGCTCCGGAAAGATTTGTCCGCATTGCTGATGAGCGAAAACAGCATCTAGTGGTGGTTCTTAATAAATATATGTTGAGGAGAACAAAAGAGGAAACTATTGGTCATCTTATGATGGGGAAGGAAGATAATGTCATCTTTTGTTCCATGAGCGAATTGCAAAAGCGGGTGTATAGGCGAATGTTGCAGCTACCAGACATCCAATGCCTGATAAATAAGGACCTTCCATGTAGTTGCGGATCTCCTCTTTCCCAAGTTGAGTGCTGCAAAAGGACTGTACCAGATGGAAAAATTTGGCCGTACCTTCATAGGGATAACCCTGATGGTTGTGATTCATGCCCATTTTGTATTGTCCTTCCTTGCCTCGTCAAGCTCCAACAGGATGACCCAGAAAAACAAAAGAAAGATGCAGAGTTTGCATCCGCTGTTTTTGGCCCAGATATTGATTTGGTGGGAGGCAACACTCAAAACGAGAGTTTTATGGGCTTGAGTGATGTTAAACAGTGTGGGAAAATGCGAGCACTTGAAAAGTTTATGTTCTCTTGGATGGCACAGGGTGATAAAGTCCTTCTGTTCAGTTACTCTGTCAGGATGCTGGACATACTGGAAAAATTTCTAATACGCAAAGGTTATTGCTTCTCAAGACTTGATGGTTCTACACCTACCAACTTGCGCCAGTCTCTTGTTGACAACTTTAATTCAAGTCCAAGCAAACAGGTGTTCCTTATATCAACTCGAGCTGGTGGGCTTGGACTGAATCTTGTCAGTGCAAATCGTGTTGTAATATTTGATCCAAGCTGGAATCCTGCTCAAGATTTACAGGCCCAAGACAGGTCATTTCGGTTCGGGCAGAAACGGCATGTTGTGGTTTTCCGCCTACTTTCTGCTGGTTCCCTTGATGAACTTGTTTATTCACGTCAGGTGTACAAACAGCAGCTATCAAACATTGCTGTTTCTGGAAAAATGGAGAAAAGATATTTTGAAGGTGTCCAGGATTGCAAAGAGTTTCAAGGGGAGCTTTTTGGAATTTGCAATTTATTTCGTGACCTTTCAGATAAGGTTTTTACCAGCGAAATATTTGAGATGCATGAAAAGCAAGGACAAAAAGAAGGGGATTGTCATGGTAGGGAACAAGAACCAACCAACATTACTTGCGTAAAAGAAGTGGGTCTGACATCTTCATCCGTGTCTGAGACCACTGATTCTGAGAAGGCTTTAGCAAGTCAACCTGTGCTCAAAGATGTGGGTGTTGTCTATGCACATCGTAATGAAGACATTGTGAATAATCGACCTGGAATGAAAGGGACGATGGAAATAGTTGGTGGTTGTAACAATAGCCTCAAACAGCTTTGCACTGGTGTTGCTAGGAGAAAACAACAAGATAGTGCTGGTGGAAAGGAGAATGTATATGTATCCACAGATCGCAAAAGGATTCAGTTTAGTCTTCTTGGCAAGTTCATGGGTATGGGAGAGCTTGAATTTAGCAAGTGGGTAGTATCTGCTACTCCCCTGGAGAGGGAGAAAGTTATTCAGGACTTCAAGAAGAGAAACAAGAAGAAACTCGACAGTGTTGATTTGTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

850

Amino Acids

95.65

Weight (kDa)

8.42

Isoelectric Point (pI)

45.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNF2-rel_dom PF00176 116 - 389 1.6e-65 SNF2-related domain
ResIII PF04851 116 - 282 1.7e-07 Type III restriction enzyme, res subunit
Helicase_C PF00271 493 - 605 2.1e-23 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013205)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2548
Acc36I ACCTGC 1 cut(s) 324
AccII CGCG 1 cut(s) 663
AccIII TCCGGA 1 cut(s) 973
AciI CCGC 9 cut(s) 164, 170, 179, 663, 988, 1132, 1203, 1389, 1840
AclI AACGTT 1 cut(s) 815
AclWI GGATC 4 cut(s) 894, 907, 1213, 1751
AcoI YGGCCR 2 cut(s) 955, 1262
AcsI RAATTY 7 cut(s) 581, 702, 806, 1257, 1577, 1992, 2444
AdeI CACNNNGTG 1 cut(s) 1523
AfaI GTAC 3 cut(s) 1245, 1268, 1892
AfiI CCNNNNNNNGG 5 cut(s) 400, 1276, 1797, 2481, 2482
AflII CTTAAG 1 cut(s) 767
AjiI CACGTC 1 cut(s) 1883
AjnI CCWGG 5 cut(s) 309, 895, 1956, 2257, 2475
Alw21I GWGCWC 2 cut(s) 1489, 2202
Alw26I GTCTC 6 cut(s) 9, 117, 154, 836, 1650, 2153
AlwI GGATC 4 cut(s) 894, 907, 1213, 1751
Ama87I CYCGRG 1 cut(s) 1701
Aor13HI TCCGGA 1 cut(s) 973
AoxI GGCC 5 cut(s) 57, 955, 1262, 1399, 1788
ApeKI GCWGC 7 cut(s) 124, 136, 458, 711, 1153, 1230, 1900
ApoI RAATTY 7 cut(s) 581, 702, 806, 1257, 1577, 1992, 2444
AsiSI GCGATCGC 1 cut(s) 484
Asp700I GAANNNNTTC 1 cut(s) 1578
AspLEI GCGC 1 cut(s) 1641
AspS9I GGNCC 5 cut(s) 142, 260, 1186, 1400, 1789
AsuC2I CCSGG 3 cut(s) 56, 232, 291
AsuHPI GGTGA 2 cut(s) 305, 1535
AvaI CYCGRG 1 cut(s) 1701
AvaII GGWCC 3 cut(s) 142, 260, 1186
AxyI CCTNAGG 1 cut(s) 131
BalI TGGCCA 1 cut(s) 957
BamHI GGATCC 1 cut(s) 899
BanII GRGCYC 1 cut(s) 273
BauI CACGAG 1 cut(s) 682
BbsI GAAGAC 2 cut(s) 2244, 2402
Bbv12I GWGCWC 2 cut(s) 1489, 2202
BbvI GCAGC 7 cut(s) 123, 136, 445, 723, 1165, 1217, 1912
BccI CCATC 7 cut(s) 470, 1075, 1244, 1283, 1507, 1610, 2269
BceAI ACGGC 2 cut(s) 1249, 1838
BciT130I CCWGG 5 cut(s) 311, 897, 1958, 2259, 2477
BciVI GTATCC 1 cut(s) 2389
BcnI CCSGG 3 cut(s) 56, 232, 291
BcoDI GTCTC 6 cut(s) 9, 117, 154, 836, 1650, 2153
BfaI CTAG 6 cut(s) 93, 425, 794, 803, 1016, 2331
BfmI CTRYAG 2 cut(s) 137, 331
BfrI CTTAAG 1 cut(s) 767
BfuAI ACCTGC 1 cut(s) 324
BfuI GTATCC 1 cut(s) 2389
BisI GCNGC 8 cut(s) 125, 137, 179, 459, 712, 1154, 1231, 1901
BlpI GCTNAGC 1 cut(s) 120
BlsI GCNGC 8 cut(s) 126, 138, 180, 460, 713, 1155, 1232, 1902
Bme1390I CCNGG 8 cut(s) 56, 232, 291, 311, 897, 1958, 2259, 2477
Bme18I GGWCC 3 cut(s) 142, 260, 1186
BmeT110I CYCGRG 1 cut(s) 1701
BmgBI CACGTC 1 cut(s) 1883
BmgT120I GGNCC 5 cut(s) 142, 260, 1186, 1400, 1789
BmiI GGNNCC 5 cut(s) 144, 262, 315, 901, 1858
BmrFI CCNGG 8 cut(s) 56, 232, 291, 311, 897, 1958, 2259, 2477
BmrI ACTGGG 4 cut(s) 230, 546, 580, 895
BmsI GCATC 7 cut(s) 329, 837, 1021, 1363, 1394, 1548, 2040
BmuI ACTGGG 4 cut(s) 230, 546, 580, 895
BpiI GAAGAC 2 cut(s) 2244, 2402
BpmI CTGGAG 1 cut(s) 2498
Bpu1102I GCTNAGC 1 cut(s) 120
BpuEI CTTGAG 3 cut(s) 1474, 1591, 1761
BpuMI CCSGG 3 cut(s) 56, 232, 291
BsaBI GATNNNNATC 2 cut(s) 480, 677
BsaI GGTCTC 2 cut(s) 836, 2153
BsaJI CCNNGG 5 cut(s) 289, 394, 619, 903, 2475
BsaWI WCCGGW 1 cut(s) 973
Bsc4I CCNNNNNNNGG 5 cut(s) 400, 1276, 1797, 2481, 2482
Bse21I CCTNAGG 1 cut(s) 131
Bse3DI GCAATG 2 cut(s) 990, 1911
Bse8I GATNNNNATC 2 cut(s) 480, 677
BseAI TCCGGA 1 cut(s) 973
BseBI CCWGG 5 cut(s) 311, 897, 1958, 2259, 2477
BseDI CCNNGG 5 cut(s) 289, 394, 619, 903, 2475
BseGI GGATG 9 cut(s) 230, 320, 757, 1164, 1354, 1385, 1518, 1563, 2147
BseJI GATNNNNATC 2 cut(s) 480, 677
BseLI CCNNNNNNNGG 5 cut(s) 400, 1276, 1797, 2481, 2482
BseMI GCAATG 2 cut(s) 990, 1911
BseMII CTCAG 4 cut(s) 134, 145, 2148, 2163
BseRI GAGGAG 3 cut(s) 119, 1060, 1200
BseXI GCAGC 7 cut(s) 123, 136, 445, 723, 1165, 1217, 1912
Bsh1236I CGCG 1 cut(s) 663
Bsh1285I CGRYCG 1 cut(s) 484
BshFI GGCC 5 cut(s) 59, 957, 1264, 1401, 1790
BsiEI CGRYCG 1 cut(s) 484
BsiHKAI GWGCWC 2 cut(s) 1489, 2202
BsiHKCI CYCGRG 1 cut(s) 1701
BsiSI CCGG 4 cut(s) 56, 231, 291, 974
BslFI GGGAC 4 cut(s) 141, 247, 435, 2284
BslI CCNNNNNNNGG 5 cut(s) 400, 1276, 1797, 2481, 2482
BsmAI GTCTC 6 cut(s) 9, 117, 154, 836, 1650, 2153
BsmBI CGTCTC 1 cut(s) 117
BsmFI GGGAC 4 cut(s) 141, 247, 435, 2284
BsnI GGCC 5 cut(s) 59, 957, 1264, 1401, 1790
Bso31I GGTCTC 2 cut(s) 836, 2153
BsoBI CYCGRG 1 cut(s) 1701
Bsp1286I GDGCHC 3 cut(s) 273, 1489, 2202
Bsp13I TCCGGA 1 cut(s) 973
Bsp1407I TGTACA 1 cut(s) 1890
Bsp143I GATC 6 cut(s) 481, 899, 962, 1205, 1756, 2386
Bsp1720I GCTNAGC 1 cut(s) 120
Bsp19I CCATGG 2 cut(s) 394, 619
BspACI CCGC 9 cut(s) 164, 170, 179, 663, 988, 1132, 1203, 1389, 1840
BspANI GGCC 5 cut(s) 59, 957, 1264, 1401, 1790
BspCNI CTCAG 4 cut(s) 133, 144, 2149, 2164
BspEI TCCGGA 1 cut(s) 973
BspFNI CGCG 1 cut(s) 663
BspLI GGNNCC 5 cut(s) 144, 262, 315, 901, 1858
BspMAI CTGCAG 2 cut(s) 141, 335
BspMI ACCTGC 1 cut(s) 324
BspPI GGATC 4 cut(s) 894, 907, 1213, 1751
BspTI CTTAAG 1 cut(s) 767
BspTNI GGTCTC 2 cut(s) 836, 2153
BsrDI GCAATG 2 cut(s) 990, 1911
BsrGI TGTACA 1 cut(s) 1890
BssECI CCNNGG 5 cut(s) 289, 394, 619, 903, 2475
BssMI GATC 6 cut(s) 481, 899, 962, 1205, 1756, 2386
BssSI CACGAG 1 cut(s) 682
BssT1I CCWWGG 3 cut(s) 394, 619, 903
Bst2BI CACGAG 1 cut(s) 682
Bst2UI CCWGG 5 cut(s) 311, 897, 1958, 2259, 2477
Bst4CI ACNGT 5 cut(s) 36, 75, 1243, 1470, 2534
Bst6I CTCTTC 1 cut(s) 2504
BstAFI CTTAAG 1 cut(s) 767
BstAPI GCANNNNNTGC 1 cut(s) 1382
BstAUI TGTACA 1 cut(s) 1890
BstC8I GCNNGC 2 cut(s) 661, 1485
BstDEI CTNAG 5 cut(s) 120, 131, 588, 2157, 2172
BstDSI CCRYGG 2 cut(s) 394, 619
BstF5I GGATG 9 cut(s) 230, 320, 757, 1164, 1354, 1385, 1518, 1563, 2147
BstFNI CGCG 1 cut(s) 663
BstHHI GCGC 1 cut(s) 1641
BstKTI GATC 6 cut(s) 484, 902, 965, 1208, 1759, 2389
BstMAI GTCTC 6 cut(s) 9, 117, 154, 836, 1650, 2153
BstMBI GATC 6 cut(s) 481, 899, 962, 1205, 1756, 2386
BstMCI CGRYCG 1 cut(s) 484
BstMWI GCNNNNNNNGC 8 cut(s) 133, 178, 455, 1009, 1150, 1382, 1822, 2059
BstNI CCWGG 5 cut(s) 311, 897, 1958, 2259, 2477
BstNSI RCATGY 2 cut(s) 801, 1829
BstSCI CCNGG 8 cut(s) 54, 230, 289, 309, 895, 1956, 2257, 2475
BstSFI CTRYAG 2 cut(s) 137, 331
BstUI CGCG 1 cut(s) 663
BstV1I GCAGC 7 cut(s) 123, 136, 445, 723, 1165, 1217, 1912
BstV2I GAAGAC 2 cut(s) 2244, 2402
BstX2I RGATCY 2 cut(s) 899, 1205
BstYI RGATCY 2 cut(s) 899, 1205
Bsu36I CCTNAGG 1 cut(s) 131
BsuI GTATCC 1 cut(s) 2389
BsuRI GGCC 5 cut(s) 59, 957, 1264, 1401, 1790
BtgI CCRYGG 2 cut(s) 394, 619
BtrI CACGTC 1 cut(s) 1883
BtsCI GGATG 9 cut(s) 230, 320, 757, 1164, 1354, 1385, 1518, 1563, 2147
BtsI GCAGTG 1 cut(s) 173
BtsIMutI CAGTG 8 cut(s) 173, 218, 834, 1475, 1738, 2163, 2319, 2539
BveI ACCTGC 1 cut(s) 324
Cac8I GCNNGC 2 cut(s) 661, 1485
CfoI GCGC 1 cut(s) 1641
Cfr13I GGNCC 5 cut(s) 142, 260, 1186, 1400, 1789
Csp6I GTAC 3 cut(s) 1244, 1267, 1891
CviQI GTAC 3 cut(s) 1244, 1267, 1891
DdeI CTNAG 5 cut(s) 120, 131, 588, 2157, 2172
DpnI GATC 6 cut(s) 483, 901, 964, 1207, 1758, 2388
DpnII GATC 6 cut(s) 481, 899, 962, 1205, 1756, 2386
DraIII CACNNNGTG 1 cut(s) 1523
EaeI YGGCCR 2 cut(s) 955, 1262
Eam1104I CTCTTC 1 cut(s) 2504
EarI CTCTTC 1 cut(s) 2504
EciI GGCGGA 1 cut(s) 1829
Eco130I CCWWGG 3 cut(s) 394, 619, 903
Eco24I GRGCYC 1 cut(s) 273
Eco31I GGTCTC 2 cut(s) 836, 2153
Eco47I GGWCC 3 cut(s) 142, 260, 1186
Eco81I CCTNAGG 1 cut(s) 131
Eco88I CYCGRG 1 cut(s) 1701
EcoO109I RGGNCCY 3 cut(s) 142, 260, 1186
EcoRII CCWGG 5 cut(s) 309, 895, 1956, 2257, 2475
EcoT14I CCWWGG 3 cut(s) 394, 619, 903
EcoT22I ATGCAT 1 cut(s) 2055
EcoT38I GRGCYC 1 cut(s) 273
ErhI CCWWGG 3 cut(s) 394, 619, 903
Esp3I CGTCTC 1 cut(s) 117
FalI AAGNNNNNCTT 2 cut(s) 1968, 2000
FaqI GGGAC 4 cut(s) 141, 247, 435, 2284
FauI CCCGC 1 cut(s) 1125
Fnu4HI GCNGC 8 cut(s) 125, 137, 179, 459, 712, 1154, 1231, 1901
FokI GGATG 9 cut(s) 237, 307, 764, 1151, 1361, 1372, 1525, 1570, 2134
FriOI GRGCYC 1 cut(s) 273
Fsp4HI GCNGC 8 cut(s) 125, 137, 179, 459, 712, 1154, 1231, 1901
FspBI CTAG 6 cut(s) 93, 425, 794, 803, 1016, 2331
GlaI GCGC 1 cut(s) 1640
GluI GCNGC 8 cut(s) 125, 137, 179, 459, 712, 1154, 1231, 1901
GsuI CTGGAG 1 cut(s) 2498
HaeIII GGCC 5 cut(s) 59, 957, 1264, 1401, 1790
HapII CCGG 4 cut(s) 56, 231, 291, 974
HhaI GCGC 1 cut(s) 1641
Hin6I GCGC 1 cut(s) 1639
HinP1I GCGC 1 cut(s) 1639
HincII GTYRAC 2 cut(s) 1654, 2192
HindII GTYRAC 2 cut(s) 1654, 2192
HinfI GANTC 6 cut(s) 491, 1298, 1723, 1768, 2168, 2398
HpaII CCGG 4 cut(s) 56, 231, 291, 974
HphI GGTGA 2 cut(s) 305, 1535
Hpy166II GTNNAC 5 cut(s) 296, 616, 1654, 1891, 2192
Hpy188I TCNGA 6 cut(s) 11, 351, 2020, 2139, 2158, 2173
Hpy8I GTNNAC 5 cut(s) 296, 616, 1654, 1891, 2192
Hpy99I CGWCG 2 cut(s) 82, 85
HpyCH4III ACNGT 5 cut(s) 36, 75, 1243, 1470, 2534
HpyCH4IV ACGT 2 cut(s) 815, 1882
HpyF10VI GCNNNNNNNGC 8 cut(s) 133, 178, 455, 1009, 1150, 1382, 1822, 2059
HpyF3I CTNAG 5 cut(s) 120, 131, 588, 2157, 2172
HpySE526I ACGT 2 cut(s) 815, 1882
HspAI GCGC 1 cut(s) 1639
Kpn2I TCCGGA 1 cut(s) 973
Kzo9I GATC 6 cut(s) 481, 899, 962, 1205, 1756, 2386
LmnI GCTCC 6 cut(s) 132, 282, 916, 976, 1344, 1981
Lsp1109I GCAGC 7 cut(s) 123, 136, 445, 723, 1165, 1217, 1912
LweI GCATC 7 cut(s) 329, 837, 1021, 1363, 1394, 1548, 2040
MaeI CTAG 6 cut(s) 93, 425, 794, 803, 1016, 2331
MaeII ACGT 2 cut(s) 815, 1882
MaeIII GTNAC 4 cut(s) 512, 1544, 2009, 2294
MalI GATC 6 cut(s) 483, 901, 964, 1207, 1758, 2388
MboI GATC 6 cut(s) 481, 899, 962, 1205, 1756, 2386
MboII GAAGA 6 cut(s) 1103, 2136, 2249, 2402, 2521, 2533
MfeI CAATTG 1 cut(s) 444
MflI RGATCY 2 cut(s) 899, 1205
MhlI GDGCHC 3 cut(s) 273, 1489, 2202
MlsI TGGCCA 1 cut(s) 957
MluNI TGGCCA 1 cut(s) 957
MmeI TCCRAC 1 cut(s) 1366
Mox20I TGGCCA 1 cut(s) 957
Mph1103I ATGCAT 1 cut(s) 2055
MroI TCCGGA 1 cut(s) 973
MroXI GAANNNNTTC 1 cut(s) 1578
MscI TGGCCA 1 cut(s) 957
MseI TTAA 7 cut(s) 327, 729, 768, 873, 1029, 1464, 1662
MslI CAYNNNNRTG 3 cut(s) 223, 2232, 2429
Msp20I TGGCCA 1 cut(s) 957
MspA1I CMGCKG 1 cut(s) 1391
MspCI CTTAAG 1 cut(s) 767
MspI CCGG 4 cut(s) 56, 231, 291, 974
MspR9I CCNGG 8 cut(s) 56, 232, 291, 311, 897, 1958, 2259, 2477
MunI CAATTG 1 cut(s) 444
MvaI CCWGG 5 cut(s) 311, 897, 1958, 2259, 2477
MvnI CGCG 1 cut(s) 663
MwoI GCNNNNNNNGC 8 cut(s) 133, 178, 455, 1009, 1150, 1382, 1822, 2059
NciI CCSGG 3 cut(s) 56, 232, 291
NcoI CCATGG 2 cut(s) 394, 619
NdeII GATC 6 cut(s) 481, 899, 962, 1205, 1756, 2386
NlaIV GGNNCC 5 cut(s) 144, 262, 315, 901, 1858
NmuCI GTSAC 2 cut(s) 512, 2009
NsiI ATGCAT 1 cut(s) 2055
NspI RCATGY 2 cut(s) 801, 1829
PaeR7I CTCGAG 1 cut(s) 1701
PdmI GAANNNNTTC 1 cut(s) 1578
PfeI GAWTC 6 cut(s) 491, 1298, 1723, 1768, 2168, 2398
PflFI GACNNNGTC 1 cut(s) 146
PfoI TCCNGGA 2 cut(s) 230, 1956
PkrI GCNGC 8 cut(s) 126, 138, 180, 460, 713, 1155, 1232, 1902
Ple19I CGATCG 1 cut(s) 484
PpuMI RGGWCCY 3 cut(s) 142, 260, 1186
PsiI TTATAA 1 cut(s) 2548
Psp1406I AACGTT 1 cut(s) 815
Psp5II RGGWCCY 3 cut(s) 142, 260, 1186
Psp6I CCWGG 5 cut(s) 309, 895, 1956, 2257, 2475
PspGI CCWGG 5 cut(s) 309, 895, 1956, 2257, 2475
PspN4I GGNNCC 5 cut(s) 144, 262, 315, 901, 1858
PspPI GGNCC 5 cut(s) 142, 260, 1186, 1400, 1789
PspPPI RGGWCCY 3 cut(s) 142, 260, 1186
PspXI VCTCGAGB 1 cut(s) 1701
PsrI GAACNNNNNNTAC 2 cut(s) 297, 329
PstI CTGCAG 2 cut(s) 141, 335
PsuI RGATCY 2 cut(s) 899, 1205
PsyI GACNNNGTC 1 cut(s) 146
PvuI CGATCG 1 cut(s) 484
RgaI GCGATCGC 1 cut(s) 484
RsaI GTAC 3 cut(s) 1245, 1268, 1892
RsaNI GTAC 3 cut(s) 1244, 1267, 1891
RseI CAYNNNNRTG 3 cut(s) 223, 2232, 2429
SaqAI TTAA 7 cut(s) 327, 729, 768, 873, 1029, 1464, 1662
SatI GCNGC 8 cut(s) 125, 137, 179, 459, 712, 1154, 1231, 1901
Sau3AI GATC 6 cut(s) 481, 899, 962, 1205, 1756, 2386
Sau96I GGNCC 5 cut(s) 142, 260, 1186, 1400, 1789
ScrFI CCNGG 8 cut(s) 56, 232, 291, 311, 897, 1958, 2259, 2477
SduI GDGCHC 3 cut(s) 273, 1489, 2202
SfaAI GCGATCGC 1 cut(s) 484
SfaNI GCATC 7 cut(s) 329, 837, 1021, 1363, 1394, 1548, 2040
SfcI CTRYAG 2 cut(s) 137, 331
Sfr274I CTCGAG 1 cut(s) 1701
SgfI GCGATCGC 1 cut(s) 484
SinI GGWCC 3 cut(s) 142, 260, 1186
SlaI CTCGAG 1 cut(s) 1701
SmiMI CAYNNNNRTG 3 cut(s) 223, 2232, 2429
SmlI CTYRAG 5 cut(s) 767, 1453, 1606, 1701, 1776
SmoI CTYRAG 5 cut(s) 767, 1453, 1606, 1701, 1776
SsiI CCGC 9 cut(s) 164, 170, 179, 663, 988, 1132, 1203, 1389, 1840
SspI AATATT 2 cut(s) 1752, 2043
SspMI CTAG 6 cut(s) 93, 425, 794, 803, 1016, 2331
StyD4I CCNGG 8 cut(s) 54, 230, 289, 309, 895, 1956, 2257, 2475
StyI CCWWGG 3 cut(s) 394, 619, 903
TaaI ACNGT 5 cut(s) 36, 75, 1243, 1470, 2534
TaiI ACGT 2 cut(s) 818, 1885
TaqI TCGA 4 cut(s) 654, 1702, 2254, 2529
TatI WGTACW 1 cut(s) 1890
TauI GCSGC 1 cut(s) 181
TfiI GAWTC 6 cut(s) 491, 1298, 1723, 1768, 2168, 2398
Tru1I TTAA 7 cut(s) 327, 729, 768, 873, 1029, 1464, 1662
Tru9I TTAA 7 cut(s) 327, 729, 768, 873, 1029, 1464, 1662
TscAI CASTG 8 cut(s) 180, 225, 841, 1475, 1738, 2170, 2326, 2539
TseFI GTSAC 2 cut(s) 512, 2009
TseI GCWGC 7 cut(s) 124, 136, 458, 711, 1153, 1230, 1900
Tsp45I GTSAC 2 cut(s) 512, 2009
TspGWI ACGGA 1 cut(s) 2140
TspRI CASTG 8 cut(s) 180, 225, 841, 1475, 1738, 2170, 2326, 2539
Tth111I GACNNNGTC 1 cut(s) 146
Vha464I CTTAAG 1 cut(s) 767
VpaK11BI GGWCC 3 cut(s) 142, 260, 1186
XapI RAATTY 7 cut(s) 581, 702, 806, 1257, 1577, 1992, 2444
XbaI TCTAGA 1 cut(s) 802
XceI RCATGY 2 cut(s) 801, 1829
XcmI CCANNNNNNNNNTGG 1 cut(s) 112
XhoI CTCGAG 1 cut(s) 1701
XmnI GAANNNNTTC 1 cut(s) 1578
XspI CTAG 6 cut(s) 93, 425, 794, 803, 1016, 2331
Zsp2I ATGCAT 1 cut(s) 2055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.