pycom17g24160

DNA excision repair protein ERCC-6-like 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0013205
Physical Location & Seq
Reverse (-)
22431089 .. 22437623
6535 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g24160.2

Sequence Viewer

Length: 2652 bp
ATGTCCCTCCAGTCCTTCAAAGAAGCCCTTAAACCCTGCAGAAACTCGTCATCCTTAACAACCCAATCACAATCCTCAATCTCCCAACCCGTAGAAGAACCTACAATCCCAAGACGTCCCCCCAAATCGTCTCTGTCTCAGCAGCTTCTGAGACTGCAAGACCCATTGTCTCTGCCGCCAATTCAAACCAAACAAATCCAGGACCAGAATGGTAGTGAGGATGAGGTTGATGAAGAAGAAGAAGACGACCCAGAACCAGTGGCCTGTGGGAGCCCTAAAGTGGGTTTCTTTGAGTTTGATCACACAGGACCATATGAGCCCTTGGTCTTGTCCTGTGAGGGAGAATTTCCGCTTGTACAGGTTCCTGCATCCGTTAACTGCAGGTTGCTTGAACATCAGAGAGAGGGAGTGAAGTTTCTTTATACTCTGTACAAGAACAATCATGGAGGTATTCTTGGTGACGACATGGGACTAGGAAAAACCATCCAAACAATTGCATTCTTGGCTGCTGTGTTTGGGAAAGATGGGGATTGCATTGACTCCACAGTACTGAAGAAATACCAAACAGCTGAAAGAGCCCCTGTTCTCATAGTTTGCCCTACTTCAGTTATCCACAATTGGGAGAATGAATTCTCTAAGTGGTCTAACTTTAGTGTTGCTGTTTACCATGGTGCAAATCGTGATTTGATTTATGATAAATTAGGATCACATGAAGTTGAGATACTTATCACAAGCTTTGACACTTACAGAATATGTGGCAGCCAGTTGTCAAAGGTGAATTGGGAGATCGTGATTGTTGATGAAGCACATCGGCTTAAAAATGAAAAATCAAAGCTCTATATAGCATGTTTAGAATTTAAAACCTTAAAGCGTATTGGTCTCACTGGAACCATAATGCAGAACAAAATCATGGAACTTTTTAATCTCTTTGACTGGGTTGCACCTGGATCCTTGGGAACACGTGAACATTTTCGCGAGTTTTATGATGAACCCCTCAAGCATGGCCAAAGGTCAACTGCCCCTGAAAGATTTGTTCGTGTTGCTGATAAGCGAAAACAACACCTAGCAGCAGTTCTTCATAAATATATGTTAAGAAGGACGAAAGAGGAAACTATTGGGCATCTTATGATGGGGAAGGAAGATAATGTCATATTCTGTGCTATGAGTGAATTGCAAAAACGGGTGTATAGGAGAATGTTACAGCTACCGGATATCCATTGCCTAATAAATAAGGACAACCCATGTAGTTGTGGAAGCCCTCTTACTCAAGCTGAGTGCTGTAAAAGGACTATGCCGCATGGAAAGCTTTGGCCATACTTTCACACGGATAACCCTGACGGTTGTGATTCATGCCCCTTCTGCATTGTCCTTCCTTGCCTTGTCAAGCTCCAACAGATAAGTAATCACTTGGAGCTGATTAAGCCTAATCCAAAGGATGACCCAGATAAGCAAAAGAAAGATGCAGAGTTTGCCACAGCTGTGTTTGGCGAAGATGCTGAATTGGTGGGAGGGAACACCCAGAATGAGAGTTTTATGGGCCTGAGTGATGTTAAACATTGTGGCAAAATGCGAGCACTTGAAAAGTTCTTGTTCTCATGGATTTCACGGGGTGACAAAGTTCTTTTGTTCAGTTACTCTGTCAGGATGCTGGACATACTGGAAAAGTTTCTCATACGCAAAGGCTATTGCTTCTCAAGACTTGATGGTTCAACACCAACCAACTTGCGTCAGTCTCTTGTTGATGACTTTAATTCAAGTCCTAGCAAACAGGTGTTCCTTATATCAACTCGAGCTGGTGGGCTTGGGTTGAATCTGGTCAGCGCAAATCGTGTGGTAATATTTGATCCAAGCTGGAACCCTGCCCAAGACTTACAGGCCCAGGACCGGTCATTTCGTTTCGGACAGAAGAGACATGTTGTGGTTTTCCGTTTTCTTTCTGCTGGTTCCCTTGATGAGCTTGTTTACTCACGTCAGGTGTACAAACAGCAGCTATCCAACATTGCTGTTTCTGGAAAAATGGAGAAAAGATATTTTGAAGGTGTCCAGGATTGCAAAGAATTTCAAGGGGAACTTTTCGGAATCTGCAATTTATTTCGTGACCTTTCAGATAAGCTCTTTACCAGTGAAATCTTCGAGTTGAATGAGAAGCAAACGCAAAAAGAATTGTATAGGACAAAACAAGAATCAACCAAAGTTGGTAGCGATCATGTTTCATTAAAAGAAGTGGATGTCGCCTCTTCATCAGTGTCTGAGGCCAGATCAACCAATGATTCTGAGAAGCGTTTAACAAGTCAACCTGTGCTCAAAGAAGTCGGTATTGTGTATGCACATCGTAATGAAGACATTGTGAATTATGGACCTGGAACTCAAGGGACGACAGAATTGACCATCCCTAATGGTAGCCTCGTGGACCCAGGCATTCATGTCTCGCGGAAGAAGAAACTAGATGGTATCGGTGGGAAGGAAAATTTTCCTTCACCCATGGATCAGAAAAGGATCCAGTACAGCCGCCTTTCTAAGTTCATGGGTTTGGGAGAGCTTGAATTTAGCAAGTGGGTAATATCTGCCACACCAATGGAGAGGGAGAGAGTGCTCGGGGACTTCAGGAAGAGAAAGAAGAAGACGATTGAAAACATTATTTTCGAAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

884

Amino Acids

100.17

Weight (kDa)

7.26

Isoelectric Point (pI)

43.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013205)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03750
fragaria_vesca FvH4_6g26480 FvH4_6g26480 FvH4_6g26480 FvH4_6g26480
malus_domestica MD17G1236900.v1.1
prunus_persica Prupe.3G139100_v2.0.a1
pyrus_communis pycom17g24160
rosa_chinensis RchiOBHm_Chr2g0127761
rosa_laevigata RLG00000018935
rosa_multiflora Rmu_sc0001829.1_g000008 Rmu_sc0004240.1_g000009
rosa_roxburghii Rroxscaffold_2G00116780
rosa_rugosa Rorug02G0271200
rosa_samantha Rh2AG323300 Rh2BG332500 Rh2CG311100
rosa_wichuraiana Rw2G026240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 118
Acc36I ACCTGC 1 cut(s) 372
AccII CGCG 2 cut(s) 975, 2431
AciI CCGC 5 cut(s) 176, 350, 1295, 2431, 2509
AclWI GGATC 7 cut(s) 712, 942, 955, 1838, 2491, 2493, 2504
AcoI YGGCCR 2 cut(s) 1003, 1310
AcsI RAATTY 6 cut(s) 344, 629, 854, 2057, 2467, 2543
AcuI CTGAAG 3 cut(s) 572, 588, 2587
AcvI CACGTG 1 cut(s) 962
AcyI GRCGYC 1 cut(s) 115
AdeI CACNNNGTG 1 cut(s) 1610
AfaI GTAC 5 cut(s) 357, 431, 549, 1979, 2504
AfiI CCNNNNNNNGG 4 cut(s) 280, 281, 619, 1884
AflIII ACRYGT 2 cut(s) 959, 1912
AgeI ACCGGT 1 cut(s) 1884
AhdI GACNNNNNGTC 1 cut(s) 166
AjiI CACGTC 1 cut(s) 1970
AjnI CCWGG 6 cut(s) 198, 943, 1878, 2043, 2359, 2413
AleI CACNNNNGTG 1 cut(s) 1478
AloI GAACNNNNNNTCC 2 cut(s) 90, 122
Alw21I GWGCWC 3 cut(s) 1576, 2304, 2595
Alw26I GTCTC 8 cut(s) 135, 141, 145, 174, 884, 1737, 1903, 2431
AlwI GGATC 7 cut(s) 712, 942, 955, 1838, 2491, 2493, 2504
AlwNI CAGNNNCTG 2 cut(s) 148, 2249
Ama87I CYCGRG 2 cut(s) 1788, 2594
AoxI GGCC 6 cut(s) 261, 1003, 1310, 1537, 1875, 2253
ApeKI GCWGC 5 cut(s) 142, 506, 759, 1067, 1987
ApoI RAATTY 6 cut(s) 344, 629, 854, 2057, 2467, 2543
AsiGI ACCGGT 1 cut(s) 1884
Asp700I GAANNNNTTC 4 cut(s) 629, 969, 1665, 2469
AspLEI GCGC 1 cut(s) 1823
AspS9I GGNCC 7 cut(s) 202, 308, 1537, 1876, 1882, 2357, 2410
AsuHPI GGTGA 4 cut(s) 470, 787, 1622, 2469
AsuII TTCGAA 1 cut(s) 2643
AvaI CYCGRG 2 cut(s) 1788, 2594
AvaII GGWCC 5 cut(s) 202, 308, 1882, 2357, 2410
BalI TGGCCA 2 cut(s) 1005, 1312
BamHI GGATCC 2 cut(s) 947, 2496
BanII GRGCYC 3 cut(s) 275, 321, 580
BarI GAAGNNNNNNTAC 4 cut(s) 705, 737, 1246, 1278
BauI CACGAG 1 cut(s) 2405
BbrPI CACGTG 1 cut(s) 962
BbsI GAAGAC 3 cut(s) 249, 2346, 2627
Bbv12I GWGCWC 3 cut(s) 1576, 2304, 2595
BbvI GCAGC 5 cut(s) 154, 493, 771, 1079, 1999
BccI CCATC 6 cut(s) 491, 518, 1123, 1697, 2396, 2441
BciT130I CCWGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
BclI TGATCA 1 cut(s) 298
BcoDI GTCTC 8 cut(s) 135, 141, 145, 174, 884, 1737, 1903, 2431
BfaI CTAG 4 cut(s) 473, 1064, 1761, 2444
BfmI CTRYAG 2 cut(s) 37, 379
BfuAI ACCTGC 1 cut(s) 372
BisI GCNGC 8 cut(s) 143, 176, 507, 760, 1068, 1295, 1988, 2509
BlsI GCNGC 8 cut(s) 144, 177, 508, 761, 1069, 1296, 1989, 2510
BmcAI AGTACT 1 cut(s) 549
Bme1390I CCNGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
Bme18I GGWCC 5 cut(s) 202, 308, 1882, 2357, 2410
BmeRI GACNNNNNGTC 1 cut(s) 166
BmeT110I CYCGRG 2 cut(s) 1788, 2594
BmgBI CACGTC 1 cut(s) 1970
BmgT120I GGNCC 7 cut(s) 202, 308, 1537, 1876, 1882, 2357, 2410
BmiI GGNNCC 8 cut(s) 272, 363, 889, 949, 1856, 1945, 2412, 2498
BmrFI CCNGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
BmrI ACTGGG 1 cut(s) 943
BmsI GCATC 5 cut(s) 377, 1129, 1450, 1483, 1635
BmuI ACTGGG 1 cut(s) 943
BpiI GAAGAC 3 cut(s) 249, 2346, 2627
Bpu14I TTCGAA 1 cut(s) 2643
BpuEI CTTGAG 4 cut(s) 980, 1251, 1678, 2352
BsaAI YACGTR 1 cut(s) 962
BsaBI GATNNNNATC 1 cut(s) 725
BsaHI GRCGYC 1 cut(s) 115
BsaI GGTCTC 1 cut(s) 884
BsaJI CCNNGG 6 cut(s) 321, 667, 951, 1878, 2413, 2481
BsaWI WCCGGW 2 cut(s) 1207, 1884
Bsc4I CCNNNNNNNGG 4 cut(s) 280, 281, 619, 1884
Bse118I RCCGGY 1 cut(s) 1884
Bse1I ACTGG 8 cut(s) 10, 257, 763, 889, 938, 1662, 2121, 2500
Bse3DI GCAATG 2 cut(s) 1216, 1998
Bse8I GATNNNNATC 1 cut(s) 725
BseBI CCWGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
BseDI CCNNGG 6 cut(s) 321, 667, 951, 1878, 2413, 2481
BseGI GGATG 8 cut(s) 50, 226, 368, 483, 1441, 1650, 2233, 2388
BseJI GATNNNNATC 1 cut(s) 725
BseLI CCNNNNNNNGG 4 cut(s) 280, 281, 619, 1884
BseMI GCAATG 2 cut(s) 1216, 1998
BseMII CTCAG 6 cut(s) 140, 152, 1263, 1532, 2241, 2265
BseNI ACTGG 8 cut(s) 10, 257, 763, 889, 938, 1662, 2121, 2500
BseXI GCAGC 5 cut(s) 154, 493, 771, 1079, 1999
Bsh1236I CGCG 2 cut(s) 975, 2431
BshFI GGCC 6 cut(s) 263, 1005, 1312, 1539, 1877, 2255
BshTI ACCGGT 1 cut(s) 1884
BsiHKAI GWGCWC 3 cut(s) 1576, 2304, 2595
BsiHKCI CYCGRG 2 cut(s) 1788, 2594
BsiSI CCGG 2 cut(s) 1208, 1885
BslFI GGGAC 4 cut(s) 102, 483, 2386, 2612
BslI CCNNNNNNNGG 4 cut(s) 280, 281, 619, 1884
BsmAI GTCTC 8 cut(s) 135, 141, 145, 174, 884, 1737, 1903, 2431
BsmBI CGTCTC 1 cut(s) 135
BsmFI GGGAC 4 cut(s) 102, 483, 2386, 2612
BsmI GAATGC 2 cut(s) 497, 2418
BsnI GGCC 6 cut(s) 263, 1005, 1312, 1539, 1877, 2255
Bso31I GGTCTC 1 cut(s) 884
BsoBI CYCGRG 2 cut(s) 1788, 2594
Bsp119I TTCGAA 1 cut(s) 2643
Bsp1286I GDGCHC 6 cut(s) 275, 321, 580, 1576, 2304, 2595
Bsp1407I TGTACA 3 cut(s) 355, 429, 1977
Bsp143I GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
Bsp19I CCATGG 2 cut(s) 667, 2481
Bsp68I TCGCGA 1 cut(s) 975
BspACI CCGC 5 cut(s) 176, 350, 1295, 2431, 2509
BspANI GGCC 6 cut(s) 263, 1005, 1312, 1539, 1877, 2255
BspCNI CTCAG 6 cut(s) 141, 151, 1264, 1533, 2242, 2266
BspFNI CGCG 2 cut(s) 975, 2431
BspLI GGNNCC 8 cut(s) 272, 363, 889, 949, 1856, 1945, 2412, 2498
BspMAI CTGCAG 2 cut(s) 41, 383
BspMI ACCTGC 1 cut(s) 372
BspPI GGATC 7 cut(s) 712, 942, 955, 1838, 2491, 2493, 2504
BspT104I TTCGAA 1 cut(s) 2643
BspTNI GGTCTC 1 cut(s) 884
BsrDI GCAATG 2 cut(s) 1216, 1998
BsrFI RCCGGY 1 cut(s) 1884
BsrGI TGTACA 3 cut(s) 355, 429, 1977
BsrI ACTGG 8 cut(s) 10, 257, 763, 889, 938, 1662, 2121, 2500
BssAI RCCGGY 1 cut(s) 1884
BssECI CCNNGG 6 cut(s) 321, 667, 951, 1878, 2413, 2481
BssMI GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
BssNI GRCGYC 1 cut(s) 115
BssSI CACGAG 1 cut(s) 2405
BssT1I CCWWGG 4 cut(s) 321, 667, 951, 2481
Bst2BI CACGAG 1 cut(s) 2405
Bst2UI CCWGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
Bst4CI ACNGT 2 cut(s) 547, 1340
Bst6I CTCTTC 3 cut(s) 1901, 2242, 2603
BstACI GRCGYC 1 cut(s) 115
BstAPI GCANNNNNTGC 1 cut(s) 1469
BstAUI TGTACA 3 cut(s) 355, 429, 1977
BstBAI YACGTR 1 cut(s) 962
BstBI TTCGAA 1 cut(s) 2643
BstC8I GCNNGC 1 cut(s) 1572
BstDEI CTNAG 8 cut(s) 138, 149, 636, 1272, 1541, 2250, 2274, 2517
BstDSI CCRYGG 2 cut(s) 667, 2481
BstF5I GGATG 8 cut(s) 50, 226, 368, 483, 1441, 1650, 2233, 2388
BstFNI CGCG 2 cut(s) 975, 2431
BstHHI GCGC 1 cut(s) 1823
BstKTI GATC 9 cut(s) 301, 707, 789, 950, 1846, 2206, 2261, 2488, 2499
BstMAI GTCTC 8 cut(s) 135, 141, 145, 174, 884, 1737, 1903, 2431
BstMBI GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
BstMWI GCNNNNNNNGC 6 cut(s) 503, 575, 1303, 1359, 1420, 1469
BstNI CCWGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
BstNSI RCATGY 2 cut(s) 849, 1916
BstSCI CCNGG 6 cut(s) 198, 943, 1878, 2043, 2359, 2413
BstSFI CTRYAG 2 cut(s) 37, 379
BstUI CGCG 2 cut(s) 975, 2431
BstV1I GCAGC 5 cut(s) 154, 493, 771, 1079, 1999
BstV2I GAAGAC 3 cut(s) 249, 2346, 2627
BstX2I RGATCY 2 cut(s) 947, 2496
BstXI CCANNNNNNTGG 1 cut(s) 2575
BstYI RGATCY 2 cut(s) 947, 2496
BsuRI GGCC 6 cut(s) 263, 1005, 1312, 1539, 1877, 2255
BtgI CCRYGG 2 cut(s) 667, 2481
BtrI CACGTC 1 cut(s) 1970
BtsCI GGATG 8 cut(s) 50, 226, 368, 483, 1441, 1650, 2233, 2388
BtsIMutI CAGTG 4 cut(s) 264, 882, 2128, 2250
BtuMI TCGCGA 1 cut(s) 975
BveI ACCTGC 1 cut(s) 372
Cac8I GCNNGC 1 cut(s) 1572
CaiI CAGNNNCTG 2 cut(s) 148, 2249
CfoI GCGC 1 cut(s) 1823
Cfr10I RCCGGY 1 cut(s) 1884
Cfr13I GGNCC 7 cut(s) 202, 308, 1537, 1876, 1882, 2357, 2410
CseI GACGC 1 cut(s) 1715
Csp6I GTAC 5 cut(s) 356, 430, 548, 1978, 2503
CspAI ACCGGT 1 cut(s) 1884
CspCI CAANNNNNGTGG 2 cut(s) 1812, 1847
CviQI GTAC 5 cut(s) 356, 430, 548, 1978, 2503
DdeI CTNAG 8 cut(s) 138, 149, 636, 1272, 1541, 2250, 2274, 2517
DpnI GATC 9 cut(s) 300, 706, 788, 949, 1845, 2205, 2260, 2487, 2498
DpnII GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
DraI TTTAAA 1 cut(s) 859
DraIII CACNNNGTG 1 cut(s) 1610
DriI GACNNNNNGTC 1 cut(s) 166
EaeI YGGCCR 2 cut(s) 1003, 1310
Eam1104I CTCTTC 3 cut(s) 1901, 2242, 2603
Eam1105I GACNNNNNGTC 1 cut(s) 166
EarI CTCTTC 3 cut(s) 1901, 2242, 2603
Eco130I CCWWGG 4 cut(s) 321, 667, 951, 2481
Eco24I GRGCYC 3 cut(s) 275, 321, 580
Eco31I GGTCTC 1 cut(s) 884
Eco32I GATATC 1 cut(s) 1213
Eco47I GGWCC 5 cut(s) 202, 308, 1882, 2357, 2410
Eco57I CTGAAG 3 cut(s) 572, 588, 2587
Eco72I CACGTG 1 cut(s) 962
Eco88I CYCGRG 2 cut(s) 1788, 2594
EcoRI GAATTC 1 cut(s) 629
EcoRII CCWGG 6 cut(s) 198, 943, 1878, 2043, 2359, 2413
EcoRV GATATC 1 cut(s) 1213
EcoT14I CCWWGG 4 cut(s) 321, 667, 951, 2481
EcoT38I GRGCYC 3 cut(s) 275, 321, 580
ErhI CCWWGG 4 cut(s) 321, 667, 951, 2481
Esp3I CGTCTC 1 cut(s) 135
FalI AAGNNNNNCTT 4 cut(s) 12, 44, 2055, 2087
FaqI GGGAC 4 cut(s) 102, 483, 2386, 2612
FauNDI CATATG 1 cut(s) 313
FbaI TGATCA 1 cut(s) 298
Fnu4HI GCNGC 8 cut(s) 143, 176, 507, 760, 1068, 1295, 1988, 2509
FokI GGATG 8 cut(s) 37, 233, 355, 470, 1448, 1657, 2240, 2375
FriOI GRGCYC 3 cut(s) 275, 321, 580
Fsp4HI GCNGC 8 cut(s) 143, 176, 507, 760, 1068, 1295, 1988, 2509
FspBI CTAG 4 cut(s) 473, 1064, 1761, 2444
GlaI GCGC 1 cut(s) 1822
GluI GCNGC 8 cut(s) 143, 176, 507, 760, 1068, 1295, 1988, 2509
HaeIII GGCC 6 cut(s) 263, 1005, 1312, 1539, 1877, 2255
HapII CCGG 2 cut(s) 1208, 1885
HgaI GACGC 1 cut(s) 1715
HhaI GCGC 1 cut(s) 1823
Hin1I GRCGYC 1 cut(s) 115
Hin6I GCGC 1 cut(s) 1821
HinP1I GCGC 1 cut(s) 1821
HincII GTYRAC 3 cut(s) 376, 1014, 2294
HindII GTYRAC 3 cut(s) 376, 1014, 2294
HindIII AAGCTT 2 cut(s) 733, 1304
HinfI GANTC 6 cut(s) 539, 1346, 1810, 2079, 2183, 2270
HpaI GTTAAC 1 cut(s) 376
HpaII CCGG 2 cut(s) 1208, 1885
HphI GGTGA 4 cut(s) 470, 787, 1622, 2469
Hpy166II GTNNAC 8 cut(s) 376, 664, 965, 1014, 1963, 1978, 2294, 2410
Hpy188I TCNGA 8 cut(s) 150, 399, 1901, 2078, 2107, 2251, 2275, 2490
Hpy188III TCNNGA 8 cut(s) 680, 790, 974, 1642, 1695, 2010, 2096, 2605
Hpy8I GTNNAC 8 cut(s) 376, 664, 965, 1014, 1963, 1978, 2294, 2410
HpyAV CCTTC 8 cut(s) 25, 1089, 1129, 1366, 1379, 2030, 2455, 2484
HpyCH4III ACNGT 2 cut(s) 547, 1340
HpyCH4IV ACGT 3 cut(s) 115, 961, 1969
HpyF10VI GCNNNNNNNGC 6 cut(s) 503, 575, 1303, 1359, 1420, 1469
HpyF3I CTNAG 8 cut(s) 138, 149, 636, 1272, 1541, 2250, 2274, 2517
HpySE526I ACGT 3 cut(s) 115, 961, 1969
Hsp92I GRCGYC 1 cut(s) 115
HspAI GCGC 1 cut(s) 1821
Ksp22I TGATCA 1 cut(s) 298
KspAI GTTAAC 1 cut(s) 376
Kzo9I GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
LmnI GCTCC 3 cut(s) 270, 1392, 1411
Lsp1109I GCAGC 5 cut(s) 154, 493, 771, 1079, 1999
LweI GCATC 5 cut(s) 377, 1129, 1450, 1483, 1635
MaeI CTAG 4 cut(s) 473, 1064, 1761, 2444
MaeII ACGT 3 cut(s) 115, 961, 1969
MaeIII GTNAC 5 cut(s) 458, 1197, 1610, 1631, 2096
MalI GATC 9 cut(s) 300, 706, 788, 949, 1845, 2205, 2260, 2487, 2498
MboI GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
MfeI CAATTG 2 cut(s) 492, 616
MflI RGATCY 2 cut(s) 947, 2496
MhlI GDGCHC 6 cut(s) 275, 321, 580, 1576, 2304, 2595
MlsI TGGCCA 2 cut(s) 1005, 1312
MluNI TGGCCA 2 cut(s) 1005, 1312
MlyI GAGTC 1 cut(s) 533
MmeI TCCRAC 2 cut(s) 1414, 2019
Mox20I TGGCCA 2 cut(s) 1005, 1312
MroXI GAANNNNTTC 4 cut(s) 629, 969, 1665, 2469
MscI TGGCCA 2 cut(s) 1005, 1312
MslI CAYNNNNRTG 3 cut(s) 1478, 2334, 2573
Msp20I TGGCCA 2 cut(s) 1005, 1312
MspA1I CMGCKG 2 cut(s) 569, 1478
MspI CCGG 2 cut(s) 1208, 1885
MspR9I CCNGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
MunI CAATTG 2 cut(s) 492, 616
Mva1269I GAATGC 2 cut(s) 497, 2418
MvaI CCWGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
MvnI CGCG 2 cut(s) 975, 2431
MwoI GCNNNNNNNGC 6 cut(s) 503, 575, 1303, 1359, 1420, 1469
NcoI CCATGG 2 cut(s) 667, 2481
NdeI CATATG 1 cut(s) 313
NdeII GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
NlaIV GGNNCC 8 cut(s) 272, 363, 889, 949, 1856, 1945, 2412, 2498
NmuCI GTSAC 3 cut(s) 458, 1610, 2096
NruI TCGCGA 1 cut(s) 975
NspI RCATGY 2 cut(s) 849, 1916
NspV TTCGAA 1 cut(s) 2643
OliI CACNNNNGTG 1 cut(s) 1478
PaeR7I CTCGAG 1 cut(s) 1788
PciI ACATGT 1 cut(s) 1912
PctI GAATGC 2 cut(s) 497, 2418
PdmI GAANNNNTTC 4 cut(s) 629, 969, 1665, 2469
PfeI GAWTC 5 cut(s) 1346, 1810, 2079, 2183, 2270
PfoI TCCNGGA 2 cut(s) 198, 2043
PinAI ACCGGT 1 cut(s) 1884
PkrI GCNGC 8 cut(s) 144, 177, 508, 761, 1069, 1296, 1989, 2510
PleI GAGTC 1 cut(s) 533
PmaCI CACGTG 1 cut(s) 962
PmlI CACGTG 1 cut(s) 962
PpsI GAGTC 1 cut(s) 533
Ppu21I YACGTR 1 cut(s) 962
PscI ACATGT 1 cut(s) 1912
Psp6I CCWGG 6 cut(s) 198, 943, 1878, 2043, 2359, 2413
PspCI CACGTG 1 cut(s) 962
PspGI CCWGG 6 cut(s) 198, 943, 1878, 2043, 2359, 2413
PspN4I GGNNCC 8 cut(s) 272, 363, 889, 949, 1856, 1945, 2412, 2498
PspPI GGNCC 7 cut(s) 202, 308, 1537, 1876, 1882, 2357, 2410
PspXI VCTCGAGB 1 cut(s) 1788
PstI CTGCAG 2 cut(s) 41, 383
PstNI CAGNNNCTG 2 cut(s) 148, 2249
PsuI RGATCY 2 cut(s) 947, 2496
PvuII CAGCTG 2 cut(s) 569, 1478
RruI TCGCGA 1 cut(s) 975
RsaI GTAC 5 cut(s) 357, 431, 549, 1979, 2504
RsaNI GTAC 5 cut(s) 356, 430, 548, 1978, 2503
RseI CAYNNNNRTG 3 cut(s) 1478, 2334, 2573
SatI GCNGC 8 cut(s) 143, 176, 507, 760, 1068, 1295, 1988, 2509
Sau3AI GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
Sau96I GGNCC 7 cut(s) 202, 308, 1537, 1876, 1882, 2357, 2410
ScaI AGTACT 1 cut(s) 549
SchI GAGTC 1 cut(s) 533
ScrFI CCNGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
SduI GDGCHC 6 cut(s) 275, 321, 580, 1576, 2304, 2595
SfaNI GCATC 5 cut(s) 377, 1129, 1450, 1483, 1635
SfcI CTRYAG 2 cut(s) 37, 379
Sfr274I CTCGAG 1 cut(s) 1788
SfuI TTCGAA 1 cut(s) 2643
SinI GGWCC 5 cut(s) 202, 308, 1882, 2357, 2410
SlaI CTCGAG 1 cut(s) 1788
SmiMI CAYNNNNRTG 3 cut(s) 1478, 2334, 2573
SmlI CTYRAG 5 cut(s) 995, 1266, 1693, 1788, 2367
SmoI CTYRAG 5 cut(s) 995, 1266, 1693, 1788, 2367
SsiI CCGC 5 cut(s) 176, 350, 1295, 2431, 2509
SspI AATATT 1 cut(s) 1839
SspMI CTAG 4 cut(s) 473, 1064, 1761, 2444
StyD4I CCNGG 6 cut(s) 198, 943, 1878, 2043, 2359, 2413
StyI CCWWGG 4 cut(s) 321, 667, 951, 2481
TaaI ACNGT 2 cut(s) 547, 1340
TaiI ACGT 3 cut(s) 118, 964, 1972
TaqI TCGA 3 cut(s) 1789, 2133, 2643
TatI WGTACW 5 cut(s) 355, 429, 547, 1977, 2502
TauI GCSGC 3 cut(s) 178, 1297, 2511
TfiI GAWTC 5 cut(s) 1346, 1810, 2079, 2183, 2270
TscAI CASTG 4 cut(s) 264, 889, 2128, 2250
TseFI GTSAC 3 cut(s) 458, 1610, 2096
TseI GCWGC 5 cut(s) 142, 506, 759, 1067, 1987
Tsp45I GTSAC 3 cut(s) 458, 1610, 2096
TspGWI ACGGA 3 cut(s) 361, 1340, 1916
TspRI CASTG 4 cut(s) 264, 889, 2128, 2250
VpaK11BI GGWCC 5 cut(s) 202, 308, 1882, 2357, 2410
XapI RAATTY 6 cut(s) 344, 629, 854, 2057, 2467, 2543
XceI RCATGY 2 cut(s) 849, 1916
XcmI CCANNNNNNNNNTGG 1 cut(s) 206
XhoI CTCGAG 1 cut(s) 1788
XmnI GAANNNNTTC 4 cut(s) 629, 969, 1665, 2469
XspI CTAG 4 cut(s) 473, 1064, 1761, 2444
ZraI GACGTC 1 cut(s) 116
ZrmI AGTACT 1 cut(s) 549
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.