FvH4_6g31160

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0010176
Physical Location & Seq
Reverse (-)
24325280 .. 24331690
6411 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g31160.t1

Sequence Viewer

Length: 2019 bp
ATGGCGAAATTGATTGCCAAATCGTTTGCTACAACGCGATCCATATCAACCTCCACTCATCTCTCTCAAAGACTTAATCAAACAGAAAATGAGATAGTTAACATGTTTCGGTTGCCTAATGCATCCGACCAAACGCACAGCTTTCCCATGAGTAGAAATATGCCTAGGAAGGACCCTTCAGTGAGGACATTGGATGACAGGTTCACAAAGATTTTGAAAATTTTCAAGTGGGGACCCGATGCCGAAAAGGCCTTGGAAGTGCTCAAGCTGAGAGTGGATCATAGGTTGGTTCTTGCTGTTCTCAAGATTGATGTCGAGGCAGTTGTTAAGGTTAAGTTTTTCAAGTGGGCTAGCAAGAGAAGGAATTTTCAGCATAACTCAACCACGTATATGGCGTTGATCCGTTGCTTGGATGAGGCCGGTATGGTTGGGGAAATGTGGAAAACCATTCAAGAGATGGTTCGTAGTGTACGTGTTATTGATCCAGCTGAGTTGTCTGAGATTATGAGAATCTTGGGAAGGGCTAAGATGGTTGACAAGGCAGTGTCTGTCTTCTACCAAATCAAAGGCCACAAGTGCTTGCCAACAGCTCATAGTTACAACTCATTGATCTTAATGCTGATGCAAGAAGGTCATCAGGAAAAGGTCCATGAGCTCTATAATGAGATGTGTAACGAGAGTAACTGTTCCCCGGACACAGTGACATACAGTGCACTAATATCTGCATTTGGAAAATTGGGCCGTGATGATTCTGCAATTAGGTTGTTTGATGAGATGAAGGATAATGGTTTACATCCAACTGCAAAGATTTATACTACCCTATTGGCGATCTTTTTCAAGTTGGGCAAGGTTGAGAAAGCTTTGAGTCTAGTTCAGGAGATGAAAGAGAATGGGTGTCCGCCTACTGTTTATACATACACTGAATTGATAAAGGGGCTAGGGAAGGCTGGGAGGGTTGAAGATGCTTATGCCATATACAAAAACATGCTGAAGGAGGGTTGTAAGCCTGATGTTGTGCTCATGAACAATCTGATAAACATTTTGGGAAAGGAAGGTCGCATAGAAACTGCTATTAAACTTTTCGATGAGATGGACATTTTGCGTTGCACGCCTAACGTGGTGACTTATAACACGATAATTAAAGCTTTATTTGATTCCAAAGCTCCAGCTGTGGTTGCAGCTTCATGGTTTGAGAAGATGAAAGTGAATGGTGTTATTCCGAGCTCTTTTACCTATTCAATTATGATAGATGGGTTTTGTAAAACAAATAGAGTTGAGAAAGCTTTGTTGCTTCTTGAAGAGATGGATGAAAAGGGGTTTCCTCCTTGTCCAGCTGCGTACTGCAGCCTGATCAACAGTCTTGGAAAAGCAAAGCGGTATGAAGCTGCAAATGAGTTATTTCAAGAATTGAAAGAAAACTGTGGACGTGCAAGTGCTAGAGTATATGCCGTGATGATTAAACATTTAGGAAAATGTGGGCGTCTAGATGAAGCTCTGGATCTTTTTCACGAGATGAAGAAACTTGGATGCAATCCAGACATATATACATATAATGCACTCATGTCAGGGATGGTTAGAGCTGGTATGATAGATGAAGCATTTACCTTGCTTAAAACCATGGGAGAAAGAGGCTGTGTTGCAGACATAAACTCACAGAACATTATTTTAAATGGCTTGGCTAGGGCAGGTGGCCCAACGAGGGCGTTAGAAATGTTTTCAAAGATGAAGCATTCCAAGATTCAACCAGATGCGGTTTCTTATAACACTATTCTTGGTTGTCTCAGTCGAGCTGGGTTGCTAGAAGAGGCTGCAAAGCTGATGAAAGAGATGACTTCAAAAGGTTTTCAATATGATCTCATCACATACTCATCAATACTTGAGGCAGTTGGCAAGGTTGATGAAGTTCATACGACTTCCTTAAAGGGATCTGGAAACATGCTCTCTAAAATCCAGTGGCATGGCATCTGTCCTGATCGACAACCTAGTAACCTTTCAATTAGATCAAAACCAGAACGCTGA

Protein Analysis

673

Amino Acids

75.44

Weight (kDa)

9.0

Isoelectric Point (pI)

27.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 177 - 286 4.7e-07 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 195 - 245 1.4e-11 PPR repeat family
PPR_3 PF13812 224 - 277 7.3e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 228 - 260 3.8e-10 PPR repeat
PPR_2 PF13041 231 - 268 9.4e-09 PPR repeat family
PPR PF01535 234 - 264 6.3e-08 PPR repeat
PPR_long PF17177 251 - 353 1.2e-07 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 254 - 315 8.5e-12 Pentatricopeptide repeat domain
PPR_2 PF13041 266 - 315 1.6e-14 PPR repeat family
PPR PF01535 270 - 299 1.4e-06 PPR repeat
TPR_24 PF23276 271 - 363 4.1e-06 Fungal tetratrico peptide repeats
PPR_1 PF12854 297 - 329 2.8e-08 PPR repeat
PPR_3 PF13812 303 - 350 2.8e-06 Pentatricopeptide repeat domain
PPR PF01535 304 - 334 8e-06 PPR repeat
PPR_2 PF13041 306 - 339 2.1e-07 PPR repeat family
PPR_3 PF13812 325 - 383 1.8e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 333 - 364 8.5e-08 PPR repeat
PPR_2 PF13041 336 - 384 2.4e-15 PPR repeat family
PPR_3 PF13812 359 - 417 1.5e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 393 - 421 4.3e-08 PPR repeat family
TPR_24 PF23276 393 - 504 2e-08 Fungal tetratrico peptide repeats
PPR_1 PF12854 403 - 435 1.2e-10 PPR repeat
PPR PF01535 410 - 440 1.3e-08 PPR repeat
PPR_2 PF13041 415 - 454 7e-07 PPR repeat family
PPR PF01535 481 - 510 3.8e-07 PPR repeat
PPR_2 PF13041 481 - 524 8.1e-15 PPR repeat family
PPR_3 PF13812 501 - 545 3.7e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 509 - 540 4.3e-09 PPR repeat
PPR_2 PF13041 514 - 561 8.4e-11 PPR repeat family
PPR PF01535 515 - 545 3.4e-07 PPR repeat
PPR_3 PF13812 536 - 593 1.1e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 549 - 595 1.6e-09 PPR repeat family
PPR_1 PF12854 580 - 611 1.7e-07 PPR repeat
PPR_2 PF13041 582 - 628 8.7e-12 PPR repeat family
PPR PF01535 585 - 615 4.5e-07 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1128, 1761
AarI CACCTGC 1 cut(s) 1676
Acc36I ACCTGC 1 cut(s) 1676
AccII CGCG 1 cut(s) 37
AciI CCGC 3 cut(s) 899, 1375, 1751
AclWI GGATC 6 cut(s) 33, 285, 394, 476, 1506, 1933
AcsI RAATTY 2 cut(s) 219, 364
AcuI CTGAAG 2 cut(s) 162, 1010
AcyI GRCGYC 1 cut(s) 1480
AfaI GTAC 2 cut(s) 471, 1340
AfiI CCNNNNNNNGG 2 cut(s) 409, 1699
AflIII ACRYGT 2 cut(s) 102, 472
AjiI CACGTC 1 cut(s) 1427
AloI GAACNNNNNNTCC 2 cut(s) 185, 217
Alw21I GWGCWC 5 cut(s) 264, 657, 715, 1020, 1226
Alw26I GTCTC 1 cut(s) 1784
Alw44I GTGCAC 1 cut(s) 711
AlwI GGATC 6 cut(s) 33, 285, 394, 476, 1506, 1933
AlwNI CAGNNNCTG 1 cut(s) 548
AoxI GGCC 5 cut(s) 249, 417, 568, 739, 1690
ApaLI GTGCAC 1 cut(s) 711
ApeKI GCWGC 5 cut(s) 1178, 1334, 1344, 1385, 1808
ApoI RAATTY 2 cut(s) 219, 364
Asp700I GAANNNNTTC 1 cut(s) 221
AspA2I CCTAGG 1 cut(s) 164
AspS9I GGNCC 5 cut(s) 172, 233, 646, 739, 1691
AsuC2I CCSGG 1 cut(s) 692
AsuHPI GGTGA 1 cut(s) 1132
AsuNHI GCTAGC 1 cut(s) 350
AvaII GGWCC 3 cut(s) 172, 233, 646
AvrII CCTAGG 1 cut(s) 164
BaeGI GKGCMC 1 cut(s) 715
BanII GRGCYC 2 cut(s) 657, 1226
BauI CACGAG 1 cut(s) 1508
BbsI GAAGAC 1 cut(s) 544
Bbv12I GWGCWC 5 cut(s) 264, 657, 715, 1020, 1226
BbvI GCAGC 5 cut(s) 1190, 1321, 1356, 1372, 1795
BccI CCATC 6 cut(s) 451, 523, 1084, 1244, 1297, 1564
BceAI ACGGC 2 cut(s) 726, 1433
BclI TGATCA 1 cut(s) 1350
BcnI CCSGG 1 cut(s) 692
BcoDI GTCTC 1 cut(s) 1784
BfaI CTAG 9 cut(s) 165, 351, 869, 938, 1437, 1484, 1680, 1799, 1983
BfmI CTRYAG 1 cut(s) 1342
BfuAI ACCTGC 1 cut(s) 1676
BglI GCCNNNNNGGC 1 cut(s) 248
BisI GCNGC 5 cut(s) 1179, 1335, 1345, 1386, 1809
BlnI CCTAGG 1 cut(s) 164
BlsI GCNGC 5 cut(s) 1180, 1336, 1346, 1387, 1810
Bme1390I CCNGG 1 cut(s) 692
Bme18I GGWCC 3 cut(s) 172, 233, 646
BmgBI CACGTC 1 cut(s) 1427
BmgT120I GGNCC 5 cut(s) 172, 233, 646, 739, 1691
BmiI GGNNCC 3 cut(s) 174, 234, 235
BmrFI CCNGG 1 cut(s) 692
BmsI GCATC 7 cut(s) 131, 229, 612, 952, 1517, 1738, 1971
BmtI GCTAGC 1 cut(s) 354
BpiI GAAGAC 1 cut(s) 544
BpmI CTGGAG 1 cut(s) 1149
BpuEI CTTGAG 3 cut(s) 248, 287, 1898
BpuMI CCSGG 1 cut(s) 692
BsaAI YACGTR 2 cut(s) 387, 473
BsaBI GATNNNNATC 1 cut(s) 43
BsaHI GRCGYC 1 cut(s) 1480
BsaJI CCNNGG 4 cut(s) 164, 252, 690, 1617
Bsc4I CCNNNNNNNGG 2 cut(s) 409, 1699
Bse118I RCCGGY 1 cut(s) 419
Bse1I ACTGG 1 cut(s) 1951
Bse8I GATNNNNATC 1 cut(s) 43
BseDI CCNNGG 4 cut(s) 164, 252, 690, 1617
BseGI GGATG 7 cut(s) 122, 199, 418, 793, 1312, 1532, 1575
BseJI GATNNNNATC 1 cut(s) 43
BseLI CCNNNNNNNGG 2 cut(s) 409, 1699
BseMII CTCAG 4 cut(s) 260, 480, 489, 1795
BseNI ACTGG 1 cut(s) 1951
BseSI GKGCMC 1 cut(s) 715
BseXI GCAGC 5 cut(s) 1190, 1321, 1356, 1372, 1795
BseYI CCCAGC 2 cut(s) 947, 1790
Bsh1236I CGCG 1 cut(s) 37
BshFI GGCC 5 cut(s) 251, 419, 570, 741, 1692
BsiHKAI GWGCWC 5 cut(s) 264, 657, 715, 1020, 1226
BsiSI CCGG 2 cut(s) 420, 692
BslFI GGGAC 1 cut(s) 246
BslI CCNNNNNNNGG 2 cut(s) 409, 1699
BsmAI GTCTC 1 cut(s) 1784
BsmFI GGGAC 1 cut(s) 246
BsmI GAATGC 1 cut(s) 1729
BsnI GGCC 5 cut(s) 251, 419, 570, 741, 1692
Bsp1286I GDGCHC 5 cut(s) 264, 657, 715, 1020, 1226
Bsp19I CCATGG 1 cut(s) 1617
BspACI CCGC 3 cut(s) 899, 1375, 1751
BspANI GGCC 5 cut(s) 251, 419, 570, 741, 1692
BspCNI CTCAG 4 cut(s) 261, 481, 490, 1794
BspFNI CGCG 1 cut(s) 37
BspHI TCATGA 1 cut(s) 1020
BspLI GGNNCC 3 cut(s) 174, 234, 235
BspMAI CTGCAG 1 cut(s) 1346
BspMI ACCTGC 1 cut(s) 1676
BspOI GCTAGC 1 cut(s) 354
BspPI GGATC 6 cut(s) 33, 285, 394, 476, 1506, 1933
BsrFI RCCGGY 1 cut(s) 419
BsrI ACTGG 1 cut(s) 1951
BssAI RCCGGY 1 cut(s) 419
BssECI CCNNGG 4 cut(s) 164, 252, 690, 1617
BssNI GRCGYC 1 cut(s) 1480
BssSI CACGAG 1 cut(s) 1508
BssT1I CCWWGG 3 cut(s) 164, 252, 1617
Bst2BI CACGAG 1 cut(s) 1508
Bst4CI ACNGT 6 cut(s) 686, 700, 710, 907, 1358, 1421
Bst6I CTCTTC 2 cut(s) 1293, 1797
BstACI GRCGYC 1 cut(s) 1480
BstBAI YACGTR 2 cut(s) 387, 473
BstC8I GCNNGC 3 cut(s) 352, 581, 1109
BstDEI CTNAG 5 cut(s) 269, 489, 498, 525, 1781
BstDSI CCRYGG 1 cut(s) 1617
BstF5I GGATG 7 cut(s) 122, 199, 418, 793, 1312, 1532, 1575
BstFNI CGCG 1 cut(s) 37
BstMAI GTCTC 1 cut(s) 1784
BstMWI GCNNNNNNNGC 4 cut(s) 248, 576, 1108, 1175
BstNSI RCATGY 3 cut(s) 106, 988, 1939
BstSCI CCNGG 1 cut(s) 690
BstSFI CTRYAG 1 cut(s) 1342
BstSLI GKGCMC 1 cut(s) 715
BstUI CGCG 1 cut(s) 37
BstV1I GCAGC 5 cut(s) 1190, 1321, 1356, 1372, 1795
BstV2I GAAGAC 1 cut(s) 544
BstX2I RGATCY 2 cut(s) 1498, 1925
BstXI CCANNNNNNTGG 2 cut(s) 391, 1958
BstYI RGATCY 2 cut(s) 1498, 1925
BsuRI GGCC 5 cut(s) 251, 419, 570, 741, 1692
BtgI CCRYGG 1 cut(s) 1617
BtrI CACGTC 1 cut(s) 1427
BtsCI GGATG 7 cut(s) 122, 199, 418, 793, 1312, 1532, 1575
BtsI GCAGTG 1 cut(s) 549
BtsIMutI CAGTG 6 cut(s) 186, 549, 705, 715, 918, 1958
BveI ACCTGC 1 cut(s) 1676
Cac8I GCNNGC 3 cut(s) 352, 581, 1109
CaiI CAGNNNCTG 1 cut(s) 548
CciI TCATGA 1 cut(s) 1020
Cfr10I RCCGGY 1 cut(s) 419
Cfr13I GGNCC 5 cut(s) 172, 233, 646, 739, 1691
CseI GACGC 1 cut(s) 1469
Csp6I GTAC 2 cut(s) 470, 1339
CviQI GTAC 2 cut(s) 470, 1339
DdeI CTNAG 5 cut(s) 269, 489, 498, 525, 1781
DraI TTTAAA 1 cut(s) 1668
Eam1104I CTCTTC 2 cut(s) 1293, 1797
EarI CTCTTC 2 cut(s) 1293, 1797
EciI GGCGGA 1 cut(s) 888
Ecl136II GAGCTC 2 cut(s) 655, 1224
Eco130I CCWWGG 3 cut(s) 164, 252, 1617
Eco147I AGGCCT 1 cut(s) 251
Eco24I GRGCYC 2 cut(s) 657, 1226
Eco47I GGWCC 3 cut(s) 172, 233, 646
Eco53kI GAGCTC 2 cut(s) 655, 1224
Eco57I CTGAAG 2 cut(s) 162, 1010
EcoICRI GAGCTC 2 cut(s) 655, 1224
EcoO109I RGGNCCY 2 cut(s) 172, 233
EcoT14I CCWWGG 3 cut(s) 164, 252, 1617
EcoT22I ATGCAT 1 cut(s) 124
EcoT38I GRGCYC 2 cut(s) 657, 1226
ErhI CCWWGG 3 cut(s) 164, 252, 1617
FaqI GGGAC 1 cut(s) 246
FbaI TGATCA 1 cut(s) 1350
Fnu4HI GCNGC 5 cut(s) 1179, 1335, 1345, 1386, 1809
FokI GGATG 7 cut(s) 109, 206, 425, 780, 1319, 1539, 1582
FriOI GRGCYC 2 cut(s) 657, 1226
Fsp4HI GCNGC 5 cut(s) 1179, 1335, 1345, 1386, 1809
FspBI CTAG 9 cut(s) 165, 351, 869, 938, 1437, 1484, 1680, 1799, 1983
GluI GCNGC 5 cut(s) 1179, 1335, 1345, 1386, 1809
GsaI CCCAGC 2 cut(s) 951, 1794
GsuI CTGGAG 1 cut(s) 1149
HaeIII GGCC 5 cut(s) 251, 419, 570, 741, 1692
HapII CCGG 2 cut(s) 420, 692
HgaI GACGC 1 cut(s) 1469
Hin1I GRCGYC 1 cut(s) 1480
HincII GTYRAC 2 cut(s) 100, 535
HindII GTYRAC 2 cut(s) 100, 535
HindIII AAGCTT 3 cut(s) 858, 1143, 1281
HinfI GANTC 5 cut(s) 510, 749, 865, 1154, 1738
HpaI GTTAAC 1 cut(s) 100
HpaII CCGG 2 cut(s) 420, 692
HphI GGTGA 1 cut(s) 1132
Hpy166II GTNNAC 7 cut(s) 100, 204, 470, 535, 713, 791, 1424
Hpy188I TCNGA 4 cut(s) 127, 499, 1032, 1221
Hpy8I GTNNAC 7 cut(s) 100, 204, 470, 535, 713, 791, 1424
HpyAV CCTTC 9 cut(s) 163, 186, 354, 513, 623, 772, 937, 985, 1046
HpyCH4III ACNGT 6 cut(s) 686, 700, 710, 907, 1358, 1421
HpyCH4IV ACGT 4 cut(s) 386, 472, 1116, 1426
HpyF10VI GCNNNNNNNGC 4 cut(s) 248, 576, 1108, 1175
HpyF3I CTNAG 5 cut(s) 269, 489, 498, 525, 1781
HpySE526I ACGT 4 cut(s) 386, 472, 1116, 1426
Hsp92I GRCGYC 1 cut(s) 1480
KflI GGGWCCC 1 cut(s) 233
Ksp22I TGATCA 1 cut(s) 1350
KspAI GTTAAC 1 cut(s) 100
LmnI GCTCC 1 cut(s) 1168
Lsp1109I GCAGC 5 cut(s) 1190, 1321, 1356, 1372, 1795
LweI GCATC 7 cut(s) 131, 229, 612, 952, 1517, 1738, 1971
MaeI CTAG 9 cut(s) 165, 351, 869, 938, 1437, 1484, 1680, 1799, 1983
MaeII ACGT 4 cut(s) 386, 472, 1116, 1426
MaeIII GTNAC 6 cut(s) 596, 671, 680, 700, 1120, 1985
MboII GAAGA 6 cut(s) 544, 971, 1207, 1310, 1528, 1814
MflI RGATCY 2 cut(s) 1498, 1925
MhlI GDGCHC 5 cut(s) 264, 657, 715, 1020, 1226
MlyI GAGTC 1 cut(s) 874
MmeI TCCRAC 2 cut(s) 150, 821
Mph1103I ATGCAT 1 cut(s) 124
MroXI GAANNNNTTC 1 cut(s) 221
MslI CAYNNNNRTG 1 cut(s) 389
MspA1I CMGCKG 3 cut(s) 488, 1169, 1334
MspI CCGG 2 cut(s) 420, 692
MspR9I CCNGG 1 cut(s) 692
Mva1269I GAATGC 1 cut(s) 1729
MvnI CGCG 1 cut(s) 37
MwoI GCNNNNNNNGC 4 cut(s) 248, 576, 1108, 1175
NciI CCSGG 1 cut(s) 692
NcoI CCATGG 1 cut(s) 1617
NheI GCTAGC 1 cut(s) 350
NlaIV GGNNCC 3 cut(s) 174, 234, 235
NmuCI GTSAC 2 cut(s) 700, 1120
NsiI ATGCAT 1 cut(s) 124
NspI RCATGY 3 cut(s) 106, 988, 1939
PagI TCATGA 1 cut(s) 1020
PaqCI CACCTGC 1 cut(s) 1676
PceI AGGCCT 1 cut(s) 251
PciI ACATGT 1 cut(s) 102
PcsI WCGNNNNNNNCGW 2 cut(s) 392, 469
PctI GAATGC 1 cut(s) 1729
PdmI GAANNNNTTC 1 cut(s) 221
PfeI GAWTC 4 cut(s) 510, 749, 1154, 1738
PkrI GCNGC 5 cut(s) 1180, 1336, 1346, 1387, 1810
PleI GAGTC 1 cut(s) 873
PpsI GAGTC 1 cut(s) 873
Ppu21I YACGTR 2 cut(s) 387, 473
PpuMI RGGWCCY 2 cut(s) 172, 233
PscI ACATGT 1 cut(s) 102
PsiI TTATAA 2 cut(s) 1128, 1761
Psp124BI GAGCTC 2 cut(s) 657, 1226
Psp5II RGGWCCY 2 cut(s) 172, 233
PspFI CCCAGC 2 cut(s) 947, 1790
PspN4I GGNNCC 3 cut(s) 174, 234, 235
PspPI GGNCC 5 cut(s) 172, 233, 646, 739, 1691
PspPPI RGGWCCY 2 cut(s) 172, 233
PstI CTGCAG 1 cut(s) 1346
PstNI CAGNNNCTG 1 cut(s) 548
PsuI RGATCY 2 cut(s) 1498, 1925
PvuII CAGCTG 3 cut(s) 488, 1169, 1334
RsaI GTAC 2 cut(s) 471, 1340
RsaNI GTAC 2 cut(s) 470, 1339
RseI CAYNNNNRTG 1 cut(s) 389
SacI GAGCTC 2 cut(s) 657, 1226
SatI GCNGC 5 cut(s) 1179, 1335, 1345, 1386, 1809
Sau96I GGNCC 5 cut(s) 172, 233, 646, 739, 1691
SchI GAGTC 1 cut(s) 874
ScrFI CCNGG 1 cut(s) 692
SduI GDGCHC 5 cut(s) 264, 657, 715, 1020, 1226
SfaNI GCATC 7 cut(s) 131, 229, 612, 952, 1517, 1738, 1971
SfcI CTRYAG 1 cut(s) 1342
SinI GGWCC 3 cut(s) 172, 233, 646
SmiMI CAYNNNNRTG 1 cut(s) 389
SmlI CTYRAG 3 cut(s) 263, 302, 1877
SmoI CTYRAG 3 cut(s) 263, 302, 1877
SseBI AGGCCT 1 cut(s) 251
SsiI CCGC 3 cut(s) 899, 1375, 1751
SspMI CTAG 9 cut(s) 165, 351, 869, 938, 1437, 1484, 1680, 1799, 1983
SstI GAGCTC 2 cut(s) 657, 1226
StuI AGGCCT 1 cut(s) 251
StyD4I CCNGG 1 cut(s) 690
StyI CCWWGG 3 cut(s) 164, 252, 1617
TaaI ACNGT 6 cut(s) 686, 700, 710, 907, 1358, 1421
TaiI ACGT 4 cut(s) 389, 475, 1119, 1429
TaqI TCGA 4 cut(s) 315, 1083, 1786, 1975
TfiI GAWTC 4 cut(s) 510, 749, 1154, 1738
TscAI CASTG 6 cut(s) 186, 549, 705, 715, 925, 1958
TseFI GTSAC 2 cut(s) 700, 1120
TseI GCWGC 5 cut(s) 1178, 1334, 1344, 1385, 1808
Tsp45I GTSAC 2 cut(s) 700, 1120
TspGWI ACGGA 1 cut(s) 392
TspRI CASTG 6 cut(s) 186, 549, 705, 715, 925, 1958
VneI GTGCAC 1 cut(s) 711
VpaK11BI GGWCC 3 cut(s) 172, 233, 646
XapI RAATTY 2 cut(s) 219, 364
XbaI TCTAGA 1 cut(s) 1483
XceI RCATGY 3 cut(s) 106, 988, 1939
XcmI CCANNNNNNNNNTGG 1 cut(s) 454
XmaJI CCTAGG 1 cut(s) 164
XmnI GAANNNNTTC 1 cut(s) 221
XspI CTAG 9 cut(s) 165, 351, 869, 938, 1437, 1484, 1680, 1799, 1983
Zsp2I ATGCAT 1 cut(s) 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.