Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0010176

Physical Location & Seq

Genomic Coordinates Reverse (-)

43429257 .. 43433696

Gene Structure 4440 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0346900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGGAGCCTCACTTTGCCTTTTCTGATGGAAATGACAAAACAAAGCCAAACTCAGATGTGACCCTTCACTGGGAGACACTTCACTGGGATCGGAACTGCTCCCATCTTCTATCCTTTGCGGCCTACAGTGGCCGTGATGTTGCTTATAGAAAGGTGTATCCTGTTTGGAAATGGTATGAGAAGCAAGATGGGATTCGATCTCTGCAGAAAAATAGTAAAGATCCAGCTCCAGAATTTTACAACTTTTATCTTGAAAGGCCCAAGGGTGATGCTGATGGGTATGATTTAGTTGTTGTTGATGCCATGCATAAAGCAACCTATGCAAGTAGAATTTGTCACTTGTGCCGACCTAATTGTGAAGCAAAAGTTACTGCTGTAGATGGTCGTTACCAGATTGGAATCTACACTGTACGTAAAATTCAATACGGTGAAGAGATCACATTGGACTACAACACTATTAAGGAGAGTAAGGAAGAATATGAAGCATCAGATTGTTTGTGCGGCAGTCAAGTTTGCTGGGGAGGTTACCTGAATTTGATAGGCGAAGGATCATTCCTGGAGGTGCTGAAGGATTGTCATAAAATTCTGAATTGTCATCGTCTAATGCTGGAAGCTTGCGAGTTAAATTCAGTATCTGAGCTTGTTTGGTATCCCTCCTGCTGCCTAATTCGCTCAGTTTTAATTTTGAAATCAACCGTCATTTATTTTGCTGTTGCTATTGTTTTGCTTGAAGGGGAGGTAAAGCACAACTTAAAAGAAAAGAACAATTATTGCTCAGATACATGTCGTGAGGTTGAGAAGAGTGATGCGGAGGCTGACGGTGTGTTCAAACAAAGGGTTCAGAGTTTGGCTGTTACTCTTGACAAGGTGAAGTATGTTATGTGCTCTGTATTTGGCAACCCAAAGAATGCTCCACCTCCACTGGAGAGGTTAAGTCCAGAAGAGGCTGTTGGCTTTCTATGGGAGGGAGAAGGATCATTTGTTGAGGAAGTCCTTGAGAGCATTGCTCCTAATGTGGAGGAACAATTGCTAAATGATCTCAAGTCCCAAATGCCTACTCATGATCCGTCGGGTTCAGATGACATTCGGAAAGAACTTGAGGGTTTGTTACTATGGTTGAGAGATGAGGTCAGGAATCTTCCAAGTACATGCACGTCTAAGCTTAACGCTGCTGCTGACTTGATCAATATTTATGCATGCAGAAGGAACTACATTAGAATACGGGAATACAAACCAGTGAATTCACTGCCGGTATACATTAGTCCGCTTGACTTGGGGCCCAAGTACACTGACAAATCGGGGGCAGGTTTTCAGGAGTATTGCAAGACTTTTGGGGAGAATTATTGTTTATGGCAGCTAATTTTTTGCTATAATCAGCCTAATGCAGAGTCAGATTGTAGTATTGCTAGAGCAAGTAGGGATTGCTTATCATTACCTGATAACGATTCCTCCTATGCCGAGATTTCAGAACCTTCATGGCCGCTTGTGTATGGTCCAAAGGCTGTCAAATGTATGCTTTCGAGGGTGGATGTGTCAAATACCAAGGACGGAAAGGCACAGATGAAGGATGAAATTGGAGAAGGGACAGAAGTTGAGGTTTCCAGTGATGAAGATGGATTTCAAGGCTCATGGTTTGCAGCCATTGTTGTCCAGGTATTGGGGAAGGTCAAATTTGTTGTTCAGTATAAGTGCTTAAAAACAGATGATGGTAAAGAGTTCTTGACAGAAGAGATTGATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

580

Amino Acids

65.64

Weight (kDa)

5.0

Isoelectric Point (pI)

40.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SET	PF00856	74 - 151	1.9e-10	SET domain
SDG2_C	PF19633	162 - 516	1.1e-126	Protein SET DOMAIN GROUP 2 C-terminal
Agenet	PF05641	528 - 580	1e-14	Agenet domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010176)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16010
fragaria_vesca	FvH4_6g31160
malus_domestica	MD17G1195500.v1.1
prunus_persica	Prupe.3G071400_v2.0.a1
pyrus_communis	pycom17g20110
rosa_chinensis	RchiOBHm_Chr2g0137841
rosa_laevigata	RLG00000019680
rosa_multiflora	Rmu_co8002616.1_g000001 Rmu_sc0002170.1_g000007 Rmu_sc0007548.1_g000006
rosa_roxburghii	Rroxscaffold_2G00106770
rosa_rugosa	Rorug02G0346600 Rorug02G0346700 Rorug02G0346800 Rorug02G0346900 Rorug02G0347000
rosa_samantha	Rh2AG393400 Rh2BG400900 Rh2CG380100 Rh2DG415900
rosa_wichuraiana	Rw2G032220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1295
AccB7I	CCANNNNNTGG	1 cut(s)	1657
AccI	GTMKAC	1 cut(s)	1254
AciI	CCGC	5 cut(s)	119, 501, 809, 1265, 1481
AclWI	GGATC	5 cut(s)	96, 215, 556, 982, 1058
AcoI	YGGCCR	2 cut(s)	130, 1478
AcsI	RAATTY	8 cut(s)	233, 330, 417, 532, 582, 625, 1240, 1670
AcuI	CTGAAG	1 cut(s)	587
AfaI	GTAC	3 cut(s)	411, 1147, 1286
AfiI	CCNNNNNNNGG	3 cut(s)	69, 70, 1657
AflIII	ACRYGT	1 cut(s)	782
AgsI	TTSAA	6 cut(s)	254, 422, 688, 731, 829, 1622
AjiI	CACGTC	1 cut(s)	1155
AjnI	CCWGG	2 cut(s)	555, 1650
AjuI	GAANNNNNNNTTGG	2 cut(s)	933, 965
AluBI	AGCT	5 cut(s)	227, 614, 640, 1162, 1357
AluI	AGCT	5 cut(s)	227, 614, 640, 1162, 1357
Alw21I	GWGCWC	1 cut(s)	887
Alw26I	GTCTC	1 cut(s)	68
AlwI	GGATC	5 cut(s)	96, 215, 556, 982, 1058
AlwNI	CAGNNNCTG	1 cut(s)	635
AoxI	GGCC	5 cut(s)	120, 130, 257, 1277, 1478
ApaI	GGGCCC	1 cut(s)	1281
ApeKI	GCWGC	5 cut(s)	660, 1169, 1172, 1354, 1637
ApoI	RAATTY	8 cut(s)	233, 330, 417, 532, 582, 625, 1240, 1670
AspS9I	GGNCC	4 cut(s)	258, 1277, 1278, 1493
AsuHPI	GGTGA	3 cut(s)	278, 440, 880
AvaII	GGWCC	1 cut(s)	1493
BaeGI	GKGCMC	1 cut(s)	1281
BanII	GRGCYC	1 cut(s)	1281
Bbv12I	GWGCWC	1 cut(s)	887
BbvI	GCAGC	5 cut(s)	647, 1156, 1159, 1366, 1649
BccI	CCATC	7 cut(s)	20, 111, 182, 269, 374, 1607, 1700
BceAI	ACGGC	1 cut(s)	117
BciT130I	CCWGG	2 cut(s)	557, 1652
BciVI	GTATCC	2 cut(s)	168, 660
BclI	TGATCA	1 cut(s)	1182
BcoDI	GTCTC	1 cut(s)	68
BfaI	CTAG	1 cut(s)	1407
BfmI	CTRYAG	3 cut(s)	124, 203, 375
BfuAI	ACCTGC	1 cut(s)	1295
BfuI	GTATCC	2 cut(s)	168, 660
BisI	GCNGC	8 cut(s)	120, 502, 661, 1170, 1173, 1355, 1481, 1638
BlsI	GCNGC	8 cut(s)	121, 503, 662, 1171, 1174, 1356, 1482, 1639
Bme1390I	CCNGG	2 cut(s)	557, 1652
Bme18I	GGWCC	1 cut(s)	1493
BmgBI	CACGTC	1 cut(s)	1155
BmgT120I	GGNCC	4 cut(s)	258, 1277, 1278, 1493
BmiI	GGNNCC	3 cut(s)	6, 1278, 1279
BmrFI	CCNGG	2 cut(s)	557, 1652
BmrI	ACTGGG	2 cut(s)	79, 94
BmsI	GCATC	5 cut(s)	259, 289, 494, 796, 1726
BmuI	ACTGGG	2 cut(s)	79, 94
BplI	GAGNNNNNCTC	2 cut(s)	991, 1023
BpmI	CTGGAG	3 cut(s)	213, 578, 944
BpuEI	CTTGAG	3 cut(s)	1016, 1025, 1118
BsaAI	YACGTR	1 cut(s)	413
BsaBI	GATNNNNATC	1 cut(s)	398
BsaJI	CCNNGG	2 cut(s)	261, 1542
BsaXI	ACNNNNNCTCC	2 cut(s)	1433, 1463
Bsc4I	CCNNNNNNNGG	3 cut(s)	69, 70, 1657
Bse118I	RCCGGY	1 cut(s)	1249
Bse1I	ACTGG	5 cut(s)	74, 89, 927, 1235, 1602
Bse3DI	GCAATG	1 cut(s)	1002
Bse8I	GATNNNNATC	1 cut(s)	398
BseBI	CCWGG	2 cut(s)	557, 1652
BseDI	CCNNGG	2 cut(s)	261, 1542
BseGI	GGATG	2 cut(s)	1534, 1573
BseJI	GATNNNNATC	1 cut(s)	398
BseLI	CCNNNNNNNGG	3 cut(s)	69, 70, 1657
BseMI	GCAATG	1 cut(s)	1002
BseMII	CTCAG	4 cut(s)	66, 627, 687, 789
BseNI	ACTGG	5 cut(s)	74, 89, 927, 1235, 1602
BseSI	GKGCMC	1 cut(s)	1281
BseXI	GCAGC	5 cut(s)	647, 1156, 1159, 1366, 1649
BseYI	CCCAGC	1 cut(s)	516
BshFI	GGCC	5 cut(s)	122, 132, 259, 1279, 1480
BsiHKAI	GWGCWC	1 cut(s)	887
BsiSI	CCGG	1 cut(s)	1250
BslFI	GGGAC	2 cut(s)	1030, 1597
BslI	CCNNNNNNNGG	3 cut(s)	69, 70, 1657
BsmAI	GTCTC	1 cut(s)	68
BsmFI	GGGAC	2 cut(s)	1030, 1597
BsmI	GAATGC	1 cut(s)	913
BsnI	GGCC	5 cut(s)	122, 132, 259, 1279, 1480
Bsp120I	GGGCCC	1 cut(s)	1277
Bsp1286I	GDGCHC	2 cut(s)	887, 1281
Bsp143I	GATC	9 cut(s)	88, 197, 220, 435, 548, 974, 1036, 1063, 1182
BspACI	CCGC	5 cut(s)	119, 501, 809, 1265, 1481
BspANI	GGCC	5 cut(s)	122, 132, 259, 1279, 1480
BspCNI	CTCAG	4 cut(s)	65, 628, 686, 788
BspHI	TCATGA	1 cut(s)	1060
BspLI	GGNNCC	3 cut(s)	6, 1278, 1279
BspMAI	CTGCAG	1 cut(s)	207
BspMI	ACCTGC	1 cut(s)	1295
BspPI	GGATC	5 cut(s)	96, 215, 556, 982, 1058
BsrDI	GCAATG	1 cut(s)	1002
BsrFI	RCCGGY	1 cut(s)	1249
BsrI	ACTGG	5 cut(s)	74, 89, 927, 1235, 1602
BssAI	RCCGGY	1 cut(s)	1249
BssECI	CCNNGG	2 cut(s)	261, 1542
BssMI	GATC	9 cut(s)	88, 197, 220, 435, 548, 974, 1036, 1063, 1182
BssNAI	GTATAC	1 cut(s)	1255
BssT1I	CCWWGG	2 cut(s)	261, 1542
Bst1107I	GTATAC	1 cut(s)	1255
Bst2UI	CCWGG	2 cut(s)	557, 1652
Bst4CI	ACNGT	5 cut(s)	128, 409, 428, 697, 821
Bst6I	CTCTTC	4 cut(s)	426, 794, 936, 1722
BstAPI	GCANNNNNTGC	1 cut(s)	320
BstBAI	YACGTR	1 cut(s)	413
BstC8I	GCNNGC	2 cut(s)	616, 1198
BstDEI	CTNAG	5 cut(s)	52, 636, 673, 775, 1158
BstEII	GGTNACC	1 cut(s)	524
BstF5I	GGATG	2 cut(s)	1534, 1573
BstKTI	GATC	9 cut(s)	91, 200, 223, 438, 551, 977, 1039, 1066, 1185
BstMAI	GTCTC	1 cut(s)	68
BstMBI	GATC	9 cut(s)	88, 197, 220, 435, 548, 974, 1036, 1063, 1182
BstMWI	GCNNNNNNNGC	2 cut(s)	320, 669
BstNI	CCWGG	2 cut(s)	557, 1652
BstNSI	RCATGY	3 cut(s)	786, 1152, 1200
BstPI	GGTNACC	1 cut(s)	524
BstSCI	CCNGG	2 cut(s)	555, 1650
BstSFI	CTRYAG	3 cut(s)	124, 203, 375
BstSLI	GKGCMC	1 cut(s)	1281
BstSNI	TACGTA	1 cut(s)	413
BstV1I	GCAGC	5 cut(s)	647, 1156, 1159, 1366, 1649
BstX2I	RGATCY	1 cut(s)	220
BstYI	RGATCY	1 cut(s)	220
BstZ17I	GTATAC	1 cut(s)	1255
BsuI	GTATCC	2 cut(s)	168, 660
BsuRI	GGCC	5 cut(s)	122, 132, 259, 1279, 1480
BtrI	CACGTC	1 cut(s)	1155
BtsCI	GGATG	2 cut(s)	1534, 1573
BtsI	GCAGTG	1 cut(s)	1244
BtsIMutI	CAGTG	9 cut(s)	67, 82, 133, 405, 920, 1242, 1244, 1287, 1609
BveI	ACCTGC	1 cut(s)	1295
Cac8I	GCNNGC	2 cut(s)	616, 1198
CaiI	CAGNNNCTG	1 cut(s)	635
CciI	TCATGA	1 cut(s)	1060
Cfr10I	RCCGGY	1 cut(s)	1249
Cfr13I	GGNCC	4 cut(s)	258, 1277, 1278, 1493
Csp6I	GTAC	3 cut(s)	410, 1146, 1285
CviAII	CATG	7 cut(s)	304, 783, 1061, 1149, 1197, 1476, 1629
CviQI	GTAC	3 cut(s)	410, 1146, 1285
DdeI	CTNAG	5 cut(s)	52, 636, 673, 775, 1158
DpnI	GATC	9 cut(s)	90, 199, 222, 437, 550, 976, 1038, 1065, 1184
DpnII	GATC	9 cut(s)	88, 197, 220, 435, 548, 974, 1036, 1063, 1182
EaeI	YGGCCR	2 cut(s)	130, 1478
Eam1104I	CTCTTC	4 cut(s)	426, 794, 936, 1722
EarI	CTCTTC	4 cut(s)	426, 794, 936, 1722
Eco105I	TACGTA	1 cut(s)	413
Eco130I	CCWWGG	2 cut(s)	261, 1542
Eco24I	GRGCYC	1 cut(s)	1281
Eco47I	GGWCC	1 cut(s)	1493
Eco57I	CTGAAG	1 cut(s)	587
Eco91I	GGTNACC	1 cut(s)	524
EcoO109I	RGGNCCY	1 cut(s)	1277
EcoO65I	GGTNACC	1 cut(s)	524
EcoRI	GAATTC	1 cut(s)	1240
EcoRII	CCWGG	2 cut(s)	555, 1650
EcoT14I	CCWWGG	2 cut(s)	261, 1542
EcoT22I	ATGCAT	3 cut(s)	309, 1198, 1741
EcoT38I	GRGCYC	1 cut(s)	1281
ErhI	CCWWGG	2 cut(s)	261, 1542
FaeI	CATG	7 cut(s)	307, 786, 1064, 1152, 1200, 1479, 1632
FalI	AAGNNNNNCTT	2 cut(s)	734, 766
FaqI	GGGAC	2 cut(s)	1030, 1597
FatI	CATG	7 cut(s)	303, 782, 1060, 1148, 1196, 1475, 1628
FbaI	TGATCA	1 cut(s)	1182
FblI	GTMKAC	1 cut(s)	1254
Fnu4HI	GCNGC	8 cut(s)	120, 502, 661, 1170, 1173, 1355, 1481, 1638
FokI	GGATG	2 cut(s)	1541, 1580
FriOI	GRGCYC	1 cut(s)	1281
Fsp4HI	GCNGC	8 cut(s)	120, 502, 661, 1170, 1173, 1355, 1481, 1638
FspBI	CTAG	1 cut(s)	1407
GluI	GCNGC	8 cut(s)	120, 502, 661, 1170, 1173, 1355, 1481, 1638
GsaI	CCCAGC	1 cut(s)	520
GsuI	CTGGAG	3 cut(s)	213, 578, 944
HaeIII	GGCC	5 cut(s)	122, 132, 259, 1279, 1480
HapII	CCGG	1 cut(s)	1250
Hin1II	CATG	7 cut(s)	307, 786, 1064, 1152, 1200, 1479, 1632
HindIII	AAGCTT	2 cut(s)	612, 1160
HinfI	GANTC	5 cut(s)	193, 399, 1135, 1388, 1445
HpaII	CCGG	1 cut(s)	1250
HphI	GGTGA	3 cut(s)	278, 440, 880
Hpy166II	GTNNAC	2 cut(s)	1255, 1287
Hpy188III	TCNNGA	9 cut(s)	230, 251, 788, 860, 938, 1061, 1132, 1313, 1720
Hpy8I	GTNNAC	2 cut(s)	1255, 1287
Hpy99I	CGWCG	1 cut(s)	1072
HpyCH4III	ACNGT	5 cut(s)	128, 409, 428, 697, 821
HpyCH4IV	ACGT	2 cut(s)	412, 1154
HpyF10VI	GCNNNNNNNGC	2 cut(s)	320, 669
HpyF3I	CTNAG	5 cut(s)	52, 636, 673, 775, 1158
HpySE526I	ACGT	2 cut(s)	412, 1154
Hsp92II	CATG	7 cut(s)	307, 786, 1064, 1152, 1200, 1479, 1632
Ksp22I	TGATCA	1 cut(s)	1182
Kzo9I	GATC	9 cut(s)	88, 197, 220, 435, 548, 974, 1036, 1063, 1182
LmnI	GCTCC	5 cut(s)	4, 104, 232, 916, 1012
Lsp1109I	GCAGC	5 cut(s)	647, 1156, 1159, 1366, 1649
LweI	GCATC	5 cut(s)	259, 289, 494, 796, 1726
MaeI	CTAG	1 cut(s)	1407
MaeII	ACGT	2 cut(s)	412, 1154
MaeIII	GTNAC	7 cut(s)	58, 335, 367, 386, 524, 853, 1107
MalI	GATC	9 cut(s)	90, 199, 222, 437, 550, 976, 1038, 1065, 1184
MboI	GATC	9 cut(s)	88, 197, 220, 435, 548, 974, 1036, 1063, 1182
MboII	GAAGA	8 cut(s)	98, 443, 485, 811, 953, 1130, 1622, 1739
MfeI	CAATTG	1 cut(s)	1025
MflI	RGATCY	1 cut(s)	220
MhlI	GDGCHC	2 cut(s)	887, 1281
MlyI	GAGTC	1 cut(s)	1397
Mph1103I	ATGCAT	3 cut(s)	309, 1198, 1741
MseI	TTAA	7 cut(s)	459, 623, 680, 752, 932, 1164, 1694
MspI	CCGG	1 cut(s)	1250
MspR9I	CCNGG	2 cut(s)	557, 1652
MunI	CAATTG	1 cut(s)	1025
Mva1269I	GAATGC	1 cut(s)	913
MvaI	CCWGG	2 cut(s)	557, 1652
MwoI	GCNNNNNNNGC	2 cut(s)	320, 669
NdeII	GATC	9 cut(s)	88, 197, 220, 435, 548, 974, 1036, 1063, 1182
NlaIII	CATG	7 cut(s)	307, 786, 1064, 1152, 1200, 1479, 1632
NlaIV	GGNNCC	3 cut(s)	6, 1278, 1279
NmeAIII	GCCGAG	1 cut(s)	1483
NmuCI	GTSAC	2 cut(s)	58, 335
NsiI	ATGCAT	3 cut(s)	309, 1198, 1741
NspI	RCATGY	3 cut(s)	786, 1152, 1200
PaeI	GCATGC	1 cut(s)	1200
PagI	TCATGA	1 cut(s)	1060
PciI	ACATGT	1 cut(s)	782
PctI	GAATGC	1 cut(s)	913
PfeI	GAWTC	4 cut(s)	193, 399, 1135, 1445
PflMI	CCANNNNNTGG	1 cut(s)	1657
PfoI	TCCNGGA	1 cut(s)	555
PkrI	GCNGC	8 cut(s)	121, 503, 662, 1171, 1174, 1356, 1482, 1639
PleI	GAGTC	1 cut(s)	1396
PpsI	GAGTC	1 cut(s)	1396
Ppu21I	YACGTR	1 cut(s)	413
PscI	ACATGT	1 cut(s)	782
Psp6I	CCWGG	2 cut(s)	555, 1650
PspEI	GGTNACC	1 cut(s)	524
PspFI	CCCAGC	1 cut(s)	516
PspGI	CCWGG	2 cut(s)	555, 1650
PspN4I	GGNNCC	3 cut(s)	6, 1278, 1279
PspOMI	GGGCCC	1 cut(s)	1277
PspPI	GGNCC	4 cut(s)	258, 1277, 1278, 1493
PstI	CTGCAG	1 cut(s)	207
PstNI	CAGNNNCTG	1 cut(s)	635
PsuI	RGATCY	1 cut(s)	220
RsaI	GTAC	3 cut(s)	411, 1147, 1286
RsaNI	GTAC	3 cut(s)	410, 1146, 1285
SaqAI	TTAA	7 cut(s)	459, 623, 680, 752, 932, 1164, 1694
SatI	GCNGC	8 cut(s)	120, 502, 661, 1170, 1173, 1355, 1481, 1638
Sau3AI	GATC	9 cut(s)	88, 197, 220, 435, 548, 974, 1036, 1063, 1182
Sau96I	GGNCC	4 cut(s)	258, 1277, 1278, 1493
SchI	GAGTC	1 cut(s)	1397
ScrFI	CCNGG	2 cut(s)	557, 1652
SduI	GDGCHC	2 cut(s)	887, 1281
SfaNI	GCATC	5 cut(s)	259, 289, 494, 796, 1726
SfcI	CTRYAG	3 cut(s)	124, 203, 375
SinI	GGWCC	1 cut(s)	1493
SmlI	CTYRAG	3 cut(s)	995, 1040, 1097
SmoI	CTYRAG	3 cut(s)	995, 1040, 1097
SnaBI	TACGTA	1 cut(s)	413
SphI	GCATGC	1 cut(s)	1200
SsiI	CCGC	5 cut(s)	119, 501, 809, 1265, 1481
SspI	AATATT	1 cut(s)	1189
SspMI	CTAG	1 cut(s)	1407
StyD4I	CCNGG	2 cut(s)	555, 1650
StyI	CCWWGG	2 cut(s)	261, 1542
TaaI	ACNGT	5 cut(s)	128, 409, 428, 697, 821
TaiI	ACGT	2 cut(s)	415, 1157
TaqI	TCGA	2 cut(s)	196, 1520
TatI	WGTACW	2 cut(s)	1145, 1284
TauI	GCSGC	3 cut(s)	122, 504, 1483
TfiI	GAWTC	4 cut(s)	193, 399, 1135, 1445
Tru1I	TTAA	7 cut(s)	459, 623, 680, 752, 932, 1164, 1694
Tru9I	TTAA	7 cut(s)	459, 623, 680, 752, 932, 1164, 1694
TscAI	CASTG	9 cut(s)	74, 89, 133, 412, 927, 1242, 1251, 1294, 1609
TseFI	GTSAC	2 cut(s)	58, 335
TseI	GCWGC	5 cut(s)	660, 1169, 1172, 1354, 1637
Tsp45I	GTSAC	2 cut(s)	58, 335
TspDTI	ATGAA	5 cut(s)	495, 1464, 1577, 1584, 1623
TspGWI	ACGGA	2 cut(s)	1056, 1563
TspRI	CASTG	9 cut(s)	74, 89, 133, 412, 927, 1242, 1251, 1294, 1609
Van91I	CCANNNNNTGG	1 cut(s)	1657
VpaK11BI	GGWCC	1 cut(s)	1493
XapI	RAATTY	8 cut(s)	233, 330, 417, 532, 582, 625, 1240, 1670
XceI	RCATGY	3 cut(s)	786, 1152, 1200
XmiI	GTMKAC	1 cut(s)	1254
XspI	CTAG	1 cut(s)	1407
Zsp2I	ATGCAT	3 cut(s)	309, 1198, 1741

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.