FvH4_6g31590

FH protein interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0018059
Physical Location & Seq
Reverse (-)
24702228 .. 24705557
3330 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g31590.t1

Sequence Viewer

Length: 2265 bp
ATGCTTTCTGCAATGTTTAGTGGTCGTCATACTTTAAAGAAAGATGAAAAGGGGTATGTTTTGATTGACAGAGATGGTGATTATTTTGGATATGTTCTGAATTGGTTACGAGATGGTGATGTTCCTCCTTTAGACGCTCGTGCACAGTACCATCTCCTGAAAGAGGCAGAGTACTATCAATTACTTGGTTTGATAGATAGAATAAACTCAATGAACACAAGTGCTGCTGAGTTAACACGTGTTGATGTCATAAGATGTATACAATCAAATCAGAAAACGTTTCGAGGTGTAAATCTTTCTGGCCTTGATCTGTCAAACCTGGAGTTAGAAGGTATAAACTTCAGTCATGCATGTCTAACCAATGTGTCATTCCTAGGTGCAAATGTGAGGGGAGCTAATTTTGATGGTGCTACTCTCTCACAAGCTGATTTTACAAAGGCAAACGTTGAAGGTTCTTCGTTTAAAAATGCTGATGCTCGAGGTGTCATCTTTCGTGATTCAGTTTCGGAAGGAAGCGTATTATTTTCTGGGGCCAAACTTGCTGGAGCTAATTTTACAGGTGCAAATCTTAATGGATCAGCTAATTTTGATTGTGCCACTCTCTCACGAGCTGATTTTACGAAGGCAAACGTTGAAGGTTCTTCGTTTAAAACTGCTGATGCTCGGGGTGCCATCTTTAGTGATTCAGTTTCTCAAGGAAGCGTATTTTCTGGGGCCAAACTTGATGGAGCTAGTTTTACAGGTGCAAATCTAAAGAATGCTCGTTTTGATGGTGTCACCACTACTGATCTTTCACGAGCTGATTTTACAAAGGCTAATCTTGAATGGGCTTGTTTAAATCGCGTGTGTGCTGTGGATGCCAACTTTAGTTCGGCTACTTGTACATATTGTGATTTCACTGAGGCGAACTTGCTTGGAGTATCATTTGCTGGCACTGACTTGAATTATGCGAATCTTCGAAGAGCACGTTTGAAAAATTGTATATTCCGCAAGGCCAACTTGAGAAGTGCAAAACTATATGATGCAGATCTTACAAATGCCTCTGCTTTCCCAAGCTTAAAGCTTGATCTCTACTTTCACAATGATGATGAACTATCTGGTGCTGTTTATTCTGACCCTATCGTCAATTTTGATTCTGGTGATACTAGTGAACAGCAAGACCTTCTCGAAGAACATGGCCGTGGGAAGGCTGCTCTACTCGGATTGTACTCCTCCATTGCATTTAAGATGAAAGAATTTAGCCAGAAAATCAGGAACCTCGAATCTGAACTTGAATCCAAGGCAAGAGACATTAGATCTGCAGAAGCCAAGACCATTTCAGTGAGGAAGCAATTTGAAGAATTGGTTCTTGAGCGTGATCGTTTACTTGAGTCATCAGGCACCAGACTCAAACAAATAGAATCTGAACTCGGAACCAAGACGAGAGACATCAATGTTGCAGAAGCCAATGCTACTACTCTAAAGAAACAGCTCGAAGAGCTCCTTCTTGAATATGATGTTTTACTCGAGAGAAACCAAATTTTAGAAAATCGATCCGAGTCATTGCAAAGGGTCAAAGAGCTGGAGTATGAACTCGAGACTAGGACGAAAGATGTTAATGTTGCAGAAGCCAATAACATTACTCTAAGGAAGCAATTTGAAGAGAGCCTCCTTGAGAATGACCGTCTATCTGAATGGAATCAAGTTTTGAACAACCAGCTGCAGTCATCGGGCAAGAGACTGCAGCATCTGGAATCTGAACTTCAGACCAAGAGGAATGAAGCTAATGCTGCAGAAGCCAAAGTTGTTGCTCTATGGAAGGAAAAGCAAGATATAGATATCGAGTTGCAAACAGCCAGCTCCAGTCTTAGACATAAAGAGTATGAACTCAAGATCAAGACAGAACATGTCACTACAACTGAAGCAAGCAATTCAGAATTAAGGAGGCTCTATCTGAATTTGAAGAACCAGTTGGACTCAATGAGCACACTATCTGAAGAAACTTCATCTCTAAGGAATGAAAACCAAAGTTTGAAGAAAAAGTTGCAGTCATCAAGCACAAGACTGAGAGAACTAGAATCTGCAGAAGACAATGATGCTCTAAAGATGGAAATCCAAAGCTTGAAGGACCAATTACAGTCATCAGAAAAAAAAACTCAAGCGAGTAGGATCTGCAGAAGCAACCACTATGGCCCTAAAGAAGGAAATCCAAAGTCTAGAGAAGGAGTTGTTTTCACTGAAAAGAAAACTCAAACAAGTAGAAACTGCAGAAGCCACTTTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB_2 Pentapeptide

Protein Analysis

755

Amino Acids

84.24

Weight (kDa)

5.84

Isoelectric Point (pI)

39.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB_2 PF02214 2 - 64 1.8e-07 BTB/POZ domain
Pentapeptide_4 PF13599 77 - 154 2.9e-08 Pentapeptide repeat region
Pentapeptide_4 PF13599 106 - 168 5.9e-09 Pentapeptide repeat region
Pentapeptide PF00805 126 - 158 4e-07 Pentapeptide repeats (8 copies)
Pentapeptide_3 PF13576 134 - 178 4e-07 Pentapeptide repeats (9 copies)
Pentapeptide_4 PF13599 173 - 246 3.3e-06 Pentapeptide repeat region
Pentapeptide_4 PF13599 200 - 263 4.8e-06 Pentapeptide repeat region
Pentapeptide_4 PF13599 263 - 338 3.2e-07 Pentapeptide repeat region
Pentapeptide_4 PF13599 289 - 347 4.6e-07 Pentapeptide repeat region
Pentapeptide PF00805 313 - 347 6e-08 Pentapeptide repeats (8 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0018059)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g31590
rosa_laevigata RLG00000019750
rosa_multiflora Rmu_ssc0000210.1_g000004
rosa_roxburghii Rroxscaffold_2G00106030
rosa_rugosa Rorug02G0351900
rosa_samantha Rh2AG401200 Rh2BG406400 Rh2CG387300 Rh2CG387400 Rh2DG421500
rosa_wichuraiana Rw2G032620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1121
AccB1I GGYRCC 2 cut(s) 668, 1379
AccI GTMKAC 1 cut(s) 259
AccII CGCG 1 cut(s) 843
AciI CCGC 1 cut(s) 988
AclI AACGTT 3 cut(s) 278, 444, 630
AclWI GGATC 3 cut(s) 583, 1527, 2156
AcoI YGGCCR 1 cut(s) 1177
AcsI RAATTY 3 cut(s) 1235, 1518, 1936
AcuI CTGAAG 4 cut(s) 325, 1727, 1920, 1995
AcvI CACGTG 1 cut(s) 239
AfaI GTAC 4 cut(s) 149, 173, 883, 1208
AfiI CCNNNNNNNGG 3 cut(s) 163, 1186, 2180
AflIII ACRYGT 3 cut(s) 236, 238, 1885
AhlI ACTAGT 1 cut(s) 1145
AjnI CCWGG 1 cut(s) 318
AjuI GAANNNNNNNTTGG 4 cut(s) 353, 385, 1934, 1966
Alw21I GWGCWC 4 cut(s) 145, 967, 1482, 1967
Alw26I GTCTC 4 cut(s) 1281, 1419, 1571, 1711
Alw44I GTGCAC 1 cut(s) 141
AlwI GGATC 3 cut(s) 583, 1527, 2156
AlwNI CAGNNNCTG 1 cut(s) 1729
Ama87I CYCGRG 4 cut(s) 477, 663, 1505, 1574
AoxI GGCC 6 cut(s) 301, 531, 714, 993, 1177, 2170
ApaLI GTGCAC 1 cut(s) 141
ApeKI GCWGC 5 cut(s) 224, 1190, 1699, 1723, 1769
ApoI RAATTY 3 cut(s) 1235, 1518, 1936
Asp700I GAANNNNTTC 1 cut(s) 1344
AspA2I CCTAGG 1 cut(s) 373
AspS9I GGNCC 4 cut(s) 531, 714, 2107, 2171
AsuHPI GGTGA 4 cut(s) 89, 128, 769, 1151
AsuII TTCGAA 1 cut(s) 958
AvaI CYCGRG 4 cut(s) 477, 663, 1505, 1574
AvaII GGWCC 1 cut(s) 2107
AvrII CCTAGG 1 cut(s) 373
BaeGI GKGCMC 1 cut(s) 145
BanI GGYRCC 2 cut(s) 668, 1379
BanII GRGCYC 1 cut(s) 1482
BauI CACGAG 3 cut(s) 138, 606, 795
BbrPI CACGTG 1 cut(s) 239
BbsI GAAGAC 1 cut(s) 2073
Bbv12I GWGCWC 4 cut(s) 145, 967, 1482, 1967
BbvI GCAGC 5 cut(s) 211, 1177, 1686, 1735, 1756
BccI CCATC 8 cut(s) 68, 107, 159, 398, 680, 719, 764, 2080
BceAI ACGGC 1 cut(s) 1164
BciT130I CCWGG 1 cut(s) 320
BcoDI GTCTC 4 cut(s) 1281, 1419, 1571, 1711
BcuI ACTAGT 1 cut(s) 1145
BfaI CTAG 6 cut(s) 374, 732, 1146, 1581, 2054, 2196
BfmI CTRYAG 7 cut(s) 1299, 1700, 1721, 1770, 2061, 2152, 2245
BglII AGATCT 2 cut(s) 1027, 1295
BisI GCNGC 5 cut(s) 225, 1191, 1700, 1724, 1770
BlnI CCTAGG 1 cut(s) 373
BlsI GCNGC 5 cut(s) 226, 1192, 1701, 1725, 1771
BmcAI AGTACT 1 cut(s) 173
Bme1390I CCNGG 1 cut(s) 320
Bme18I GGWCC 1 cut(s) 2107
BmeT110I CYCGRG 4 cut(s) 477, 663, 1505, 1574
BmgT120I GGNCC 4 cut(s) 531, 714, 2107, 2171
BmiI GGNNCC 6 cut(s) 532, 670, 715, 1256, 1381, 1414
BmrFI CCNGG 1 cut(s) 320
BmsI GCATC 6 cut(s) 463, 649, 847, 1012, 1735, 2065
BpiI GAAGAC 1 cut(s) 2073
BpmI CTGGAG 4 cut(s) 341, 564, 1583, 1825
Bpu14I TTCGAA 1 cut(s) 958
BpuEI CTTGAG 7 cut(s) 678, 1021, 1370, 1388, 1673, 1853, 2121
Bsa29I ATCGAT 1 cut(s) 1531
BsaAI YACGTR 1 cut(s) 239
BsaBI GATNNNNATC 2 cut(s) 1026, 2090
BsaJI CCNNGG 3 cut(s) 373, 1180, 1278
Bsc4I CCNNNNNNNGG 3 cut(s) 163, 1186, 2180
Bse1I ACTGG 2 cut(s) 1842, 1948
Bse3DI GCAATG 3 cut(s) 18, 1215, 1541
Bse8I GATNNNNATC 2 cut(s) 1026, 2090
BseBI CCWGG 1 cut(s) 320
BseCI ATCGAT 1 cut(s) 1531
BseDI CCNNGG 3 cut(s) 373, 1180, 1278
BseGI GGATG 1 cut(s) 862
BseJI GATNNNNATC 2 cut(s) 1026, 2090
BseLI CCNNNNNNNGG 3 cut(s) 163, 1186, 2180
BseMI GCAATG 3 cut(s) 18, 1215, 1541
BseMII CTCAG 3 cut(s) 219, 891, 2036
BseNI ACTGG 2 cut(s) 1842, 1948
BseRI GAGGAG 1 cut(s) 1201
BseSI GKGCMC 1 cut(s) 145
BseXI GCAGC 5 cut(s) 211, 1177, 1686, 1735, 1756
Bsh1236I CGCG 1 cut(s) 843
BshFI GGCC 6 cut(s) 303, 533, 716, 995, 1179, 2172
BshNI GGYRCC 2 cut(s) 668, 1379
BshVI ATCGAT 1 cut(s) 1531
BsiHKAI GWGCWC 4 cut(s) 145, 967, 1482, 1967
BsiHKCI CYCGRG 4 cut(s) 477, 663, 1505, 1574
BslI CCNNNNNNNGG 3 cut(s) 163, 1186, 2180
BsmAI GTCTC 4 cut(s) 1281, 1419, 1571, 1711
BsmI GAATGC 1 cut(s) 763
BsnI GGCC 6 cut(s) 303, 533, 716, 995, 1179, 2172
BsoBI CYCGRG 4 cut(s) 477, 663, 1505, 1574
Bsp119I TTCGAA 1 cut(s) 958
Bsp1286I GDGCHC 4 cut(s) 145, 967, 1482, 1967
Bsp1407I TGTACA 1 cut(s) 881
BspACI CCGC 1 cut(s) 988
BspANI GGCC 6 cut(s) 303, 533, 716, 995, 1179, 2172
BspCNI CTCAG 3 cut(s) 220, 892, 2037
BspDI ATCGAT 1 cut(s) 1531
BspFNI CGCG 1 cut(s) 843
BspLI GGNNCC 6 cut(s) 532, 670, 715, 1256, 1381, 1414
BspMAI CTGCAG 7 cut(s) 1303, 1704, 1725, 1774, 2065, 2156, 2249
BspPI GGATC 3 cut(s) 583, 1527, 2156
BspQI GCTCTTC 2 cut(s) 955, 1470
BspT104I TTCGAA 1 cut(s) 958
BspT107I GGYRCC 2 cut(s) 668, 1379
BsrDI GCAATG 3 cut(s) 18, 1215, 1541
BsrGI TGTACA 1 cut(s) 881
BsrI ACTGG 2 cut(s) 1842, 1948
BssECI CCNNGG 3 cut(s) 373, 1180, 1278
BssNAI GTATAC 1 cut(s) 260
BssSI CACGAG 3 cut(s) 138, 606, 795
BssT1I CCWWGG 2 cut(s) 373, 1278
Bst1107I GTATAC 1 cut(s) 260
Bst2BI CACGAG 3 cut(s) 138, 606, 795
Bst2UI CCWGG 1 cut(s) 320
Bst4CI ACNGT 3 cut(s) 147, 1664, 2118
Bst6I CTCTTC 3 cut(s) 955, 1470, 1635
BstAUI TGTACA 1 cut(s) 881
BstBAI YACGTR 1 cut(s) 239
BstBI TTCGAA 1 cut(s) 958
BstC8I GCNNGC 3 cut(s) 931, 1837, 1906
BstDEI CTNAG 6 cut(s) 228, 900, 1625, 1847, 1991, 2045
BstDSI CCRYGG 1 cut(s) 1180
BstENI CCTNNNNNAGG 2 cut(s) 161, 2178
BstF5I GGATG 1 cut(s) 862
BstFNI CGCG 1 cut(s) 843
BstMAI GTCTC 4 cut(s) 1281, 1419, 1571, 1711
BstMWI GCNNNNNNNGC 6 cut(s) 539, 668, 857, 1477, 1769, 1775
BstNI CCWGG 1 cut(s) 320
BstNSI RCATGY 2 cut(s) 354, 1889
BstSCI CCNGG 1 cut(s) 318
BstSFI CTRYAG 7 cut(s) 1299, 1700, 1721, 1770, 2061, 2152, 2245
BstSLI GKGCMC 1 cut(s) 145
BstUI CGCG 1 cut(s) 843
BstV1I GCAGC 5 cut(s) 211, 1177, 1686, 1735, 1756
BstV2I GAAGAC 1 cut(s) 2073
BstX2I RGATCY 3 cut(s) 1027, 1295, 2148
BstYI RGATCY 3 cut(s) 1027, 1295, 2148
BstZ17I GTATAC 1 cut(s) 260
Bsu15I ATCGAT 1 cut(s) 1531
BsuRI GGCC 6 cut(s) 303, 533, 716, 995, 1179, 2172
BsuTUI ATCGAT 1 cut(s) 1531
BtgI CCRYGG 1 cut(s) 1180
BtsCI GGATG 1 cut(s) 862
BtsIMutI CAGTG 4 cut(s) 897, 933, 1326, 2214
Cac8I GCNNGC 3 cut(s) 931, 1837, 1906
CaiI CAGNNNCTG 1 cut(s) 1729
Cfr13I GGNCC 4 cut(s) 531, 714, 2107, 2171
ClaI ATCGAT 1 cut(s) 1531
CseI GACGC 1 cut(s) 143
Csp6I GTAC 4 cut(s) 148, 172, 882, 1207
CviAII CATG 4 cut(s) 347, 351, 1175, 1886
CviQI GTAC 4 cut(s) 148, 172, 882, 1207
DdeI CTNAG 6 cut(s) 228, 900, 1625, 1847, 1991, 2045
DraI TTTAAA 5 cut(s) 36, 463, 649, 837, 2260
DrdI GACNNNNNNGTC 1 cut(s) 1121
DseDI GACNNNNNNGTC 1 cut(s) 1121
EaeI YGGCCR 1 cut(s) 1177
Eam1104I CTCTTC 3 cut(s) 955, 1470, 1635
EarI CTCTTC 3 cut(s) 955, 1470, 1635
Ecl136II GAGCTC 1 cut(s) 1480
Eco130I CCWWGG 2 cut(s) 373, 1278
Eco24I GRGCYC 1 cut(s) 1482
Eco32I GATATC 1 cut(s) 1819
Eco47I GGWCC 1 cut(s) 2107
Eco53kI GAGCTC 1 cut(s) 1480
Eco57I CTGAAG 4 cut(s) 325, 1727, 1920, 1995
Eco72I CACGTG 1 cut(s) 239
Eco88I CYCGRG 4 cut(s) 477, 663, 1505, 1574
EcoICRI GAGCTC 1 cut(s) 1480
EcoNI CCTNNNNNAGG 2 cut(s) 161, 2178
EcoRII CCWGG 1 cut(s) 318
EcoRV GATATC 1 cut(s) 1819
EcoT14I CCWWGG 2 cut(s) 373, 1278
EcoT22I ATGCAT 1 cut(s) 352
EcoT38I GRGCYC 1 cut(s) 1482
ErhI CCWWGG 2 cut(s) 373, 1278
FaeI CATG 4 cut(s) 350, 354, 1178, 1889
FalI AAGNNNNNCTT 4 cut(s) 983, 1015, 1467, 1499
FatI CATG 4 cut(s) 346, 350, 1174, 1885
FblI GTMKAC 1 cut(s) 259
Fnu4HI GCNGC 5 cut(s) 225, 1191, 1700, 1724, 1770
FokI GGATG 1 cut(s) 869
FriOI GRGCYC 1 cut(s) 1482
Fsp4HI GCNGC 5 cut(s) 225, 1191, 1700, 1724, 1770
FspBI CTAG 6 cut(s) 374, 732, 1146, 1581, 2054, 2196
GluI GCNGC 5 cut(s) 225, 1191, 1700, 1724, 1770
GsuI CTGGAG 4 cut(s) 341, 564, 1583, 1825
HaeIII GGCC 6 cut(s) 303, 533, 716, 995, 1179, 2172
HgaI GACGC 1 cut(s) 143
Hin1II CATG 4 cut(s) 350, 354, 1178, 1889
HincII GTYRAC 1 cut(s) 234
HindII GTYRAC 1 cut(s) 234
HindIII AAGCTT 3 cut(s) 1054, 1061, 2098
HpaI GTTAAC 1 cut(s) 234
HphI GGTGA 4 cut(s) 89, 128, 769, 1151
Hpy166II GTNNAC 5 cut(s) 143, 234, 260, 1151, 1364
Hpy8I GTNNAC 5 cut(s) 143, 234, 260, 1151, 1364
HpyCH4III ACNGT 3 cut(s) 147, 1664, 2118
HpyCH4IV ACGT 5 cut(s) 238, 278, 444, 630, 967
HpyF10VI GCNNNNNNNGC 6 cut(s) 539, 668, 857, 1477, 1769, 1775
HpyF3I CTNAG 6 cut(s) 228, 900, 1625, 1847, 1991, 2045
HpySE526I ACGT 5 cut(s) 238, 278, 444, 630, 967
Hsp92II CATG 4 cut(s) 350, 354, 1178, 1889
KspAI GTTAAC 1 cut(s) 234
LguI GCTCTTC 2 cut(s) 955, 1470
LmnI GCTCC 5 cut(s) 392, 545, 728, 1485, 1844
Lsp1109I GCAGC 5 cut(s) 211, 1177, 1686, 1735, 1756
LweI GCATC 6 cut(s) 463, 649, 847, 1012, 1735, 2065
MaeI CTAG 6 cut(s) 374, 732, 1146, 1581, 2054, 2196
MaeII ACGT 5 cut(s) 238, 278, 444, 630, 967
MaeIII GTNAC 3 cut(s) 105, 775, 1888
MflI RGATCY 3 cut(s) 1027, 1295, 2148
MhlI GDGCHC 4 cut(s) 145, 967, 1482, 1967
MlyI GAGTC 4 cut(s) 1379, 1380, 1547, 1949
MmeI TCCRAC 1 cut(s) 1932
Mph1103I ATGCAT 1 cut(s) 352
MroXI GAANNNNTTC 1 cut(s) 1344
MslI CAYNNNNRTG 3 cut(s) 1083, 1179, 1319
MspA1I CMGCKG 1 cut(s) 1699
MspR9I CCNGG 1 cut(s) 320
Mva1269I GAATGC 1 cut(s) 763
MvaI CCWGG 1 cut(s) 320
MvnI CGCG 1 cut(s) 843
MwoI GCNNNNNNNGC 6 cut(s) 539, 668, 857, 1477, 1769, 1775
NlaIII CATG 4 cut(s) 350, 354, 1178, 1889
NlaIV GGNNCC 6 cut(s) 532, 670, 715, 1256, 1381, 1414
NmuCI GTSAC 2 cut(s) 775, 1888
NsiI ATGCAT 1 cut(s) 352
NspI RCATGY 2 cut(s) 354, 1889
NspV TTCGAA 1 cut(s) 958
PaeR7I CTCGAG 3 cut(s) 477, 1505, 1574
PciI ACATGT 1 cut(s) 1885
PciSI GCTCTTC 2 cut(s) 955, 1470
PcsI WCGNNNNNNNCGW 1 cut(s) 964
PctI GAATGC 1 cut(s) 763
PdmI GAANNNNTTC 1 cut(s) 1344
PkrI GCNGC 5 cut(s) 226, 1192, 1701, 1725, 1771
PleI GAGTC 4 cut(s) 1378, 1380, 1546, 1949
PmaCI CACGTG 1 cut(s) 239
PmlI CACGTG 1 cut(s) 239
PpsI GAGTC 4 cut(s) 1378, 1380, 1546, 1949
Ppu21I YACGTR 1 cut(s) 239
PscI ACATGT 1 cut(s) 1885
Psp124BI GAGCTC 1 cut(s) 1482
Psp1406I AACGTT 3 cut(s) 278, 444, 630
Psp6I CCWGG 1 cut(s) 318
PspCI CACGTG 1 cut(s) 239
PspGI CCWGG 1 cut(s) 318
PspN4I GGNNCC 6 cut(s) 532, 670, 715, 1256, 1381, 1414
PspPI GGNCC 4 cut(s) 531, 714, 2107, 2171
PspXI VCTCGAGB 1 cut(s) 477
PstI CTGCAG 7 cut(s) 1303, 1704, 1725, 1774, 2065, 2156, 2249
PstNI CAGNNNCTG 1 cut(s) 1729
PsuI RGATCY 3 cut(s) 1027, 1295, 2148
PvuII CAGCTG 1 cut(s) 1699
RsaI GTAC 4 cut(s) 149, 173, 883, 1208
RsaNI GTAC 4 cut(s) 148, 172, 882, 1207
RseI CAYNNNNRTG 3 cut(s) 1083, 1179, 1319
SacI GAGCTC 1 cut(s) 1482
SapI GCTCTTC 2 cut(s) 955, 1470
SatI GCNGC 5 cut(s) 225, 1191, 1700, 1724, 1770
Sau96I GGNCC 4 cut(s) 531, 714, 2107, 2171
ScaI AGTACT 1 cut(s) 173
SchI GAGTC 4 cut(s) 1379, 1380, 1547, 1949
ScrFI CCNGG 1 cut(s) 320
SduI GDGCHC 4 cut(s) 145, 967, 1482, 1967
SfaNI GCATC 6 cut(s) 463, 649, 847, 1012, 1735, 2065
SfcI CTRYAG 7 cut(s) 1299, 1700, 1721, 1770, 2061, 2152, 2245
Sfr274I CTCGAG 3 cut(s) 477, 1505, 1574
SfuI TTCGAA 1 cut(s) 958
SinI GGWCC 1 cut(s) 2107
SlaI CTCGAG 3 cut(s) 477, 1505, 1574
SmiMI CAYNNNNRTG 3 cut(s) 1083, 1179, 1319
SpeI ACTAGT 1 cut(s) 1145
SsiI CCGC 1 cut(s) 988
SspMI CTAG 6 cut(s) 374, 732, 1146, 1581, 2054, 2196
SstI GAGCTC 1 cut(s) 1482
StyD4I CCNGG 1 cut(s) 318
StyI CCWWGG 2 cut(s) 373, 1278
TaaI ACNGT 3 cut(s) 147, 1664, 2118
TaiI ACGT 5 cut(s) 241, 281, 447, 633, 970
TatI WGTACW 3 cut(s) 171, 881, 1206
TscAI CASTG 4 cut(s) 904, 940, 1326, 2221
TseFI GTSAC 2 cut(s) 775, 1888
TseI GCWGC 5 cut(s) 224, 1190, 1699, 1723, 1769
Tsp45I GTSAC 2 cut(s) 775, 1888
TspDTI ATGAA 9 cut(s) 60, 227, 1104, 1244, 1584, 1773, 1878, 1974, 2013
TspRI CASTG 4 cut(s) 904, 940, 1326, 2221
VneI GTGCAC 1 cut(s) 141
VpaK11BI GGWCC 1 cut(s) 2107
XagI CCTNNNNNAGG 2 cut(s) 161, 2178
XapI RAATTY 3 cut(s) 1235, 1518, 1936
XbaI TCTAGA 1 cut(s) 2195
XceI RCATGY 2 cut(s) 354, 1889
XhoI CTCGAG 3 cut(s) 477, 1505, 1574
XmaJI CCTAGG 1 cut(s) 373
XmiI GTMKAC 1 cut(s) 259
XmnI GAANNNNTTC 1 cut(s) 1344
XspI CTAG 6 cut(s) 374, 732, 1146, 1581, 2054, 2196
ZrmI AGTACT 1 cut(s) 173
Zsp2I ATGCAT 1 cut(s) 352
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.