Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0006499

Physical Location & Seq

Genomic Coordinates Reverse (-)

27968942 .. 27976871

Gene Structure 7930 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g35480.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGAATTCAGAGAAAGAGCTGCCGAATCGGGTCGACCAAGAACCCGAACCCGCCAGTCCTTGCTTTCTGCAGAAGTTCAAGCTCTACGAGACTCGCTCGAATTTTTATATGATAGGAAGAGACAAAAGCAGAACCTTATGGAAGGTGTTAAAGATTGATAGGTTGGATCCATCTGAGCTCAACATTCTTGAAGATTCTGCAACATACACAGATATTGAGTGCTATGACCTTCTGAAACGGATACATGAAGGAAACAAGTCAATGGGTGGACTTAAGTTCATCACCATTTGTTATGGAATTATTGGGTTCGTGAAGTTTCTTGGACCTTATTACATGCTTATTATTACAAAAAGAAGGAAGATTGGAGCAATTTGTGGCCATACCATCTACGGGATTAGCAAGAGCGAAATGATTCCAGTTCCAAATTCTTCTGTGCGGTCAAAATTGGCTTATTCTAGAAATGAGAACAGATACAAGAAGCTCTTATGCACAGTGGACCTGACAAGGGACTTCTTTTTCAGCTACTCATACAATATAATGTGTAGTCTTCAAAAGAACTTATGCGACAGTAAAACAGGACCATTCCTTTACGAAACAATGTTCGTTTGGAATGAGTATTTGACTCGTGGAATCCGAAATTGTCTGAAGAATACTCACTGGACAGTTGCCTTGGTGTATGGATTCTTCAAACAGGTCAATCTTTCCGTATCAGGCAGGGATTTCAAGTTGACTGTCATTGCCAGGCGTTCTCGTCACTTTGCTGGCACCAGATATTTGAAAAGAGGTATAAATGAGAAAGGTAGTGTTGCTAACGATGTTGAGACAGAGCAGGTTGTGATTGAAGATGCTCCTGAAGGATGCCCAGTACAAATAAGTTCAGTAGTGCAGAACCGAGGCTCAATTCCTCTTTTCTGGTCCCAAGAAACCTCACGGATAAATATCAAACCCGACATAATATTATCAAGGAAGGATAAAAATTATGAGGCCACAAGACTTCATTTTGAAAATCTAGTCAAGAGATATGGAAATCCGATTATTATTTTGAATCTGATTAAGACATGTGAGAAGAAGCCTCGAGAAACAATTCTCCGTGCAGAGTTTGCAAATGCTATCCGATCTATCAATAGGAGTTTGTCAAAGGAGAGCCGCCTAAGGTTTCTTCATTGGGATCTGCATAAACATGCCAGAAGCAAAACAACCAATGTATTGGCTCATCTTGGAAAAGTGGCTACATATGCATTGAGCTTAACCGGAATCTTCTATTGTCGAGTAACATCGAATTTAACGCCGGAGGGTTCATACCACGGCTCCTGGTTTGAGAAAAGTGATGATGGTGGTGACGGCTTTTCACACTGTTCCAGTAAAGATGAGGATCTTGATAGCGTAGAAACAGAAATTAGCAATGCAAGTGGTGGTGACGATATGAACAAGAATCACAATGTCAAACCCCCAATGTTTCAGAAAGGGGTCTTGAGGACCAATTGCATAGACTGTTTAGATCGCACAAATGTAGCCCAGTATGCTTATGGGCTAGTTGCTCTTGGACAGCAGATGTACGCTTTAGGATTTATAGAATCCTCAGATATTGATCTGGATAACCCTCTGGCAGAAGATTTGATGAGAATTTATGAGGCAATGGGCGACACTCTTGCATTACAGTATGGTGGTTCTGCAGCTCACAACAAGATATTTTCTGAGAAAAGAGGTCAATGGAAGGCAGCAACTCAGTCCCAAGAGTTGCTTAGAACCCTTCAACGATATTTCAGTAACGCCTACGTGGATGCTGAGAAACAGGATGCTATTAATGTATTCCTAGGGCATTTTCAACCACTACAGGGTAAACCAGCATTGTGGGAGTTGGACTCATACCAGCATTACCATGTTGGAAGGCGTAATCCTAATTTTTCCGATGACAATGGCAGTTCATTTATGAAAAGATCACTATCAGATGGCAACATAATCTGTGAAAGTGAACCGCCTATCTGTGAAAGTGAACTGCCTATGGAAAATATGGATGTTGGACACAATCAGCCTTTATCTGACATTTCACAAGGAAGTAGCAAGGGTATTTCTGAGTCTGCCCCAGCAATCTCAACTTGTGAAAGTGCAATATCTTATCACAGGATTACTCCCCCAATGCCTAGCAAGCAGCTGTTTGATGGAATGCAGGATCAATGCCTTAACAGCGATCACATTTATTATGATGAGCATGATGATGACTGTAACTTCTCAAATTTTCTAGATGCGGACTGGTTGTCTTCATCTGGAAATTCTTGTGAAGAAGAAATGTCTGCAAGGTCCATTGCTAGCCTTTCATCAGAGAATCTTGTGAATGCACCAAAATTTGAAACGAGCACATCTGCTAGTGAATCTGGATCCACAAAAAAGGGAAGAGGGCAGAGTGAATCTGATCTCGCATGTGATAATATGCCACCTGAGTACTCCAACAGCTTCATGAACTGGGTAGCTCACGGGGAGTTACTGTTTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005770 GO:0005794 GO:0005811 GO:0006629 GO:0006644 GO:0006650 GO:0006661 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009987 GO:0010008 GO:0012505 GO:0016020 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0031090 GO:0031410 GO:0031901 GO:0031902 GO:0031982 GO:0031984 GO:0034593 GO:0034595 GO:0036092 GO:0042578 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043813 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046474 GO:0046486 GO:0046488 GO:0052866 GO:0071704 GO:0090407 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:0106018 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Syja_N

Protein Analysis

831

Amino Acids

93.94

Weight (kDa)

6.2

Isoelectric Point (pI)

49.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Syja_N	PF02383	98 - 395	3.4e-83	SacI homology domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006499)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14205 AT3G14205
fragaria_vesca	FvH4_6g35480 FvH4_6g35480 FvH4_6g35480
malus_domestica	MD09G1175500.v1.1 MD17G1151300.v1.1
prunus_persica	Prupe.3G034500_v2.0.a1
pyrus_communis	pycom09g09320 pycom17g14460
rosa_chinensis	RchiOBHm_Chr2g0147031
rosa_laevigata	RLG00000020240
rosa_multiflora	Rmu_co8447827.1_g000001 Rmu_sc0001880.1_g000033 Rmu_sc0036715.1_g000001
rosa_roxburghii	Rroxscaffold_2G00099750
rosa_rugosa	Rorug02G0398100 Rorug02G0398100 Rorug02G0398200
rosa_samantha	Rh2AG455200 Rh2BG467600 Rh2CG442600 Rh2DG476800 Rh2DG476900
rosa_wichuraiana	Rw2G037140 Rw2G037240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	820
AccB1I	GGYRCC	1 cut(s)	764
AccI	GTMKAC	1 cut(s)	33
AciI	CCGC	5 cut(s)	51, 436, 1147, 1976, 2246
AclWI	GGATC	7 cut(s)	161, 174, 1176, 1380, 2178, 2370, 2383
AcoI	YGGCCR	1 cut(s)	376
AcsI	RAATTY	8 cut(s)	4, 100, 424, 1279, 1623, 2233, 2269, 2342
AcuI	CTGAAG	2 cut(s)	665, 873
AfaI	GTAC	3 cut(s)	867, 1556, 2441
AfiI	CCNNNNNNNGG	3 cut(s)	390, 505, 1835
AflII	CTTAAG	1 cut(s)	272
AflIII	ACRYGT	1 cut(s)	1058
AhdI	GACNNNNNGTC	1 cut(s)	2254
AjnI	CCWGG	2 cut(s)	740, 1310
Alw21I	GWGCWC	2 cut(s)	180, 2357
Alw26I	GTCTC	3 cut(s)	83, 114, 815
AlwI	GGATC	7 cut(s)	161, 174, 1176, 1380, 2178, 2370, 2383
Ama87I	CYCGRG	1 cut(s)	1074
AoxI	GGCC	2 cut(s)	376, 984
ApeKI	GCWGC	4 cut(s)	19, 1673, 1718, 2149
ApoI	RAATTY	8 cut(s)	4, 100, 424, 1279, 1623, 2233, 2269, 2342
AseI	ATTAAT	1 cut(s)	1803
Asp700I	GAANNNNTTC	2 cut(s)	411, 1083
AspA2I	CCTAGG	1 cut(s)	1813
AspS9I	GGNCC	6 cut(s)	323, 496, 578, 915, 1476, 2298
AsuHPI	GGTGA	3 cut(s)	274, 1349, 1427
AsuNHI	GCTAGC	1 cut(s)	2306
AvaI	CYCGRG	1 cut(s)	1074
AvaII	GGWCC	6 cut(s)	323, 496, 578, 915, 1476, 2298
AvrII	CCTAGG	1 cut(s)	1813
AxyI	CCTNAGG	1 cut(s)	1151
BalI	TGGCCA	1 cut(s)	378
BamHI	GGATCC	2 cut(s)	166, 2375
BanI	GGYRCC	1 cut(s)	764
BanII	GRGCYC	1 cut(s)	180
BarI	GAAGNNNNNNTAC	2 cut(s)	668, 700
BauI	CACGAG	1 cut(s)	624
BbsI	GAAGAC	2 cut(s)	539, 2250
Bbv12I	GWGCWC	2 cut(s)	180, 2357
BbvI	GCAGC	4 cut(s)	6, 1685, 1730, 2161
BccI	CCATC	5 cut(s)	178, 392, 1325, 1943, 2153
BceAI	ACGGC	2 cut(s)	1321, 1357
BcgI	CGANNNNNNTGC	2 cut(s)	1631, 1665
BciT130I	CCWGG	2 cut(s)	742, 1312
BciVI	GTATCC	1 cut(s)	234
BcoDI	GTCTC	3 cut(s)	83, 114, 815
BfaI	CTAG	8 cut(s)	456, 1010, 1532, 1814, 2142, 2240, 2307, 2364
BfmI	CTRYAG	3 cut(s)	68, 1671, 1832
BfrI	CTTAAG	1 cut(s)	272
BfuAI	ACCTGC	1 cut(s)	820
BfuI	GTATCC	1 cut(s)	234
BisI	GCNGC	5 cut(s)	20, 1147, 1674, 1719, 2150
BlnI	CCTAGG	1 cut(s)	1813
BlsI	GCNGC	5 cut(s)	21, 1148, 1675, 1720, 2151
BmcAI	AGTACT	1 cut(s)	2441
Bme1390I	CCNGG	2 cut(s)	742, 1312
Bme18I	GGWCC	6 cut(s)	323, 496, 578, 915, 1476, 2298
BmeRI	GACNNNNNGTC	1 cut(s)	2254
BmeT110I	CYCGRG	1 cut(s)	1074
BmgT120I	GGNCC	6 cut(s)	323, 496, 578, 915, 1476, 2298
BmiI	GGNNCC	5 cut(s)	168, 766, 917, 1309, 2377
BmrFI	CCNGG	2 cut(s)	742, 1312
BmrI	ACTGGG	3 cut(s)	857, 1510, 2470
BmsI	GCATC	5 cut(s)	835, 848, 1771, 1786, 2233
BmtI	GCTAGC	1 cut(s)	2310
BmuI	ACTGGG	3 cut(s)	857, 1510, 2470
BpiI	GAAGAC	2 cut(s)	539, 2250
BplI	GAGNNNNNCTC	4 cut(s)	80, 112, 1847, 1879
BpuEI	CTTGAG	1 cut(s)	1492
BsaAI	YACGTR	1 cut(s)	1777
BsaBI	GATNNNNATC	4 cut(s)	938, 1371, 1587, 1942
BsaJI	CCNNGG	4 cut(s)	669, 892, 1303, 1813
BsaWI	WCCGGW	1 cut(s)	1250
BsaXI	ACNNNNNCTCC	3 cut(s)	1292, 1322, 2468
Bsc4I	CCNNNNNNNGG	3 cut(s)	390, 505, 1835
Bse1I	ACTGG	8 cut(s)	54, 416, 662, 863, 1359, 1516, 2255, 2465
Bse21I	CCTNAGG	1 cut(s)	1151
Bse3DI	GCAATG	4 cut(s)	735, 1408, 1641, 2301
Bse8I	GATNNNNATC	4 cut(s)	938, 1371, 1587, 1942
BseBI	CCWGG	2 cut(s)	742, 1312
BseDI	CCNNGG	4 cut(s)	669, 892, 1303, 1813
BseGI	GGATG	4 cut(s)	863, 1786, 1801, 2020
BseJI	GATNNNNATC	4 cut(s)	938, 1371, 1587, 1942
BseLI	CCNNNNNNNGG	3 cut(s)	390, 505, 1835
BseMI	GCAATG	4 cut(s)	735, 1408, 1641, 2301
BseMII	CTCAG	7 cut(s)	165, 1593, 1686, 1739, 1776, 2064, 2427
BseNI	ACTGG	8 cut(s)	54, 416, 662, 863, 1359, 1516, 2255, 2465
BseXI	GCAGC	4 cut(s)	6, 1685, 1730, 2161
BseYI	CCCAGC	1 cut(s)	2083
BsgI	GTGCAG	2 cut(s)	905, 1113
BshFI	GGCC	2 cut(s)	378, 986
BshNI	GGYRCC	1 cut(s)	764
BsiHKAI	GWGCWC	2 cut(s)	180, 2357
BsiHKCI	CYCGRG	1 cut(s)	1074
BsiSI	CCGG	2 cut(s)	1251, 1289
BslFI	GGGAC	3 cut(s)	521, 901, 1714
BslI	CCNNNNNNNGG	3 cut(s)	390, 505, 1835
BsmAI	GTCTC	3 cut(s)	83, 114, 815
BsmFI	GGGAC	3 cut(s)	521, 901, 1714
BsmI	GAATGC	2 cut(s)	2169, 2338
BsnI	GGCC	2 cut(s)	378, 986
BsoBI	CYCGRG	1 cut(s)	1074
Bsp1286I	GDGCHC	2 cut(s)	180, 2357
BspACI	CCGC	5 cut(s)	51, 436, 1147, 1976, 2246
BspANI	GGCC	2 cut(s)	378, 986
BspCNI	CTCAG	7 cut(s)	166, 1592, 1687, 1738, 1777, 2065, 2428
BspHI	TCATGA	1 cut(s)	2454
BspLI	GGNNCC	5 cut(s)	168, 766, 917, 1309, 2377
BspMAI	CTGCAG	2 cut(s)	72, 1675
BspMI	ACCTGC	1 cut(s)	820
BspOI	GCTAGC	1 cut(s)	2310
BspPI	GGATC	7 cut(s)	161, 174, 1176, 1380, 2178, 2370, 2383
BspT107I	GGYRCC	1 cut(s)	764
BspTI	CTTAAG	1 cut(s)	272
BsrDI	GCAATG	4 cut(s)	735, 1408, 1641, 2301
BsrI	ACTGG	8 cut(s)	54, 416, 662, 863, 1359, 1516, 2255, 2465
BssECI	CCNNGG	4 cut(s)	669, 892, 1303, 1813
BssSI	CACGAG	1 cut(s)	624
BssT1I	CCWWGG	2 cut(s)	669, 1813
Bst2BI	CACGAG	1 cut(s)	624
Bst2UI	CCWGG	2 cut(s)	742, 1312
Bst4CI	ACNGT	9 cut(s)	493, 569, 664, 733, 1355, 1493, 1659, 2222, 2484
Bst6I	CTCTTC	2 cut(s)	112, 2386
BstAFI	CTTAAG	1 cut(s)	272
BstAPI	GCANNNNNTGC	1 cut(s)	1100
BstBAI	YACGTR	1 cut(s)	1777
BstC8I	GCNNGC	3 cut(s)	763, 2147, 2308
BstDEI	CTNAG	9 cut(s)	174, 1151, 1579, 1695, 1725, 1742, 1785, 2073, 2436
BstDSI	CCRYGG	1 cut(s)	1303
BstF5I	GGATG	4 cut(s)	863, 1786, 1801, 2020
BstMAI	GTCTC	3 cut(s)	83, 114, 815
BstMWI	GCNNNNNNNGC	5 cut(s)	1100, 1235, 1520, 2146, 2184
BstNI	CCWGG	2 cut(s)	742, 1312
BstNSI	RCATGY	4 cut(s)	337, 1062, 1184, 2421
BstSCI	CCNGG	2 cut(s)	740, 1310
BstSFI	CTRYAG	3 cut(s)	68, 1671, 1832
BstV1I	GCAGC	4 cut(s)	6, 1685, 1730, 2161
BstV2I	GAAGAC	2 cut(s)	539, 2250
BstX2I	RGATCY	4 cut(s)	166, 1168, 1372, 2375
BstXI	CCANNNNNNTGG	2 cut(s)	1207, 1851
BstYI	RGATCY	4 cut(s)	166, 1168, 1372, 2375
Bsu36I	CCTNAGG	1 cut(s)	1151
BsuI	GTATCC	1 cut(s)	234
BsuRI	GGCC	2 cut(s)	378, 986
BtgI	CCRYGG	1 cut(s)	1303
BtsCI	GGATG	4 cut(s)	863, 1786, 1801, 2020
BtsIMutI	CAGTG	3 cut(s)	498, 655, 1351
BveI	ACCTGC	1 cut(s)	820
Cac8I	GCNNGC	3 cut(s)	763, 2147, 2308
CciI	TCATGA	1 cut(s)	2454
Cfr13I	GGNCC	6 cut(s)	323, 496, 578, 915, 1476, 2298
Csp6I	GTAC	3 cut(s)	866, 1555, 2440
CspCI	CAANNNNNGTGG	2 cut(s)	1390, 1425
CviAII	CATG	8 cut(s)	245, 334, 1059, 1181, 1880, 2210, 2418, 2455
CviQI	GTAC	3 cut(s)	866, 1555, 2440
DdeI	CTNAG	9 cut(s)	174, 1151, 1579, 1695, 1725, 1742, 1785, 2073, 2436
DriI	GACNNNNNGTC	1 cut(s)	2254
EaeI	YGGCCR	1 cut(s)	376
Eam1104I	CTCTTC	2 cut(s)	112, 2386
Eam1105I	GACNNNNNGTC	1 cut(s)	2254
EarI	CTCTTC	2 cut(s)	112, 2386
Ecl136II	GAGCTC	1 cut(s)	178
Eco130I	CCWWGG	2 cut(s)	669, 1813
Eco24I	GRGCYC	1 cut(s)	180
Eco47I	GGWCC	6 cut(s)	323, 496, 578, 915, 1476, 2298
Eco53kI	GAGCTC	1 cut(s)	178
Eco57I	CTGAAG	2 cut(s)	665, 873
Eco81I	CCTNAGG	1 cut(s)	1151
Eco88I	CYCGRG	1 cut(s)	1074
EcoICRI	GAGCTC	1 cut(s)	178
EcoRI	GAATTC	1 cut(s)	4
EcoRII	CCWGG	2 cut(s)	740, 1310
EcoT14I	CCWWGG	2 cut(s)	669, 1813
EcoT22I	ATGCAT	1 cut(s)	1240
EcoT38I	GRGCYC	1 cut(s)	180
ErhI	CCWWGG	2 cut(s)	669, 1813
FaeI	CATG	8 cut(s)	248, 337, 1062, 1184, 1883, 2213, 2421, 2458
FalI	AAGNNNNNCTT	4 cut(s)	467, 499, 1725, 1757
FaqI	GGGAC	3 cut(s)	521, 901, 1714
FatI	CATG	8 cut(s)	244, 333, 1058, 1180, 1879, 2209, 2417, 2454
FauI	CCCGC	1 cut(s)	58
FauNDI	CATATG	1 cut(s)	1234
FblI	GTMKAC	1 cut(s)	33
Fnu4HI	GCNGC	5 cut(s)	20, 1147, 1674, 1719, 2150
FokI	GGATG	4 cut(s)	870, 1793, 1808, 2027
FriOI	GRGCYC	1 cut(s)	180
Fsp4HI	GCNGC	5 cut(s)	20, 1147, 1674, 1719, 2150
FspBI	CTAG	8 cut(s)	456, 1010, 1532, 1814, 2142, 2240, 2307, 2364
GluI	GCNGC	5 cut(s)	20, 1147, 1674, 1719, 2150
GsaI	CCCAGC	1 cut(s)	2087
HaeIII	GGCC	2 cut(s)	378, 986
HapII	CCGG	2 cut(s)	1251, 1289
Hin1II	CATG	8 cut(s)	248, 337, 1062, 1184, 1883, 2213, 2421, 2458
HincII	GTYRAC	2 cut(s)	34, 729
HindII	GTYRAC	2 cut(s)	34, 729
HpaII	CCGG	2 cut(s)	1251, 1289
HphI	GGTGA	3 cut(s)	274, 1349, 1427
Hpy166II	GTNNAC	7 cut(s)	34, 269, 496, 729, 1841, 1973, 1994
Hpy8I	GTNNAC	7 cut(s)	34, 269, 496, 729, 1841, 1973, 1994
HpyAV	CCTTC	9 cut(s)	136, 239, 242, 348, 848, 961, 1708, 1760, 1881
HpyCH4III	ACNGT	9 cut(s)	493, 569, 664, 733, 1355, 1493, 1659, 2222, 2484
HpyCH4IV	ACGT	1 cut(s)	1776
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1100, 1235, 1520, 2146, 2184
HpyF3I	CTNAG	9 cut(s)	174, 1151, 1579, 1695, 1725, 1742, 1785, 2073, 2436
HpySE526I	ACGT	1 cut(s)	1776
Hsp92II	CATG	8 cut(s)	248, 337, 1062, 1184, 1883, 2213, 2421, 2458
LmnI	GCTCC	3 cut(s)	365, 853, 1313
Lsp1109I	GCAGC	4 cut(s)	6, 1685, 1730, 2161
LweI	GCATC	5 cut(s)	835, 848, 1771, 1786, 2233
MaeI	CTAG	8 cut(s)	456, 1010, 1532, 1814, 2142, 2240, 2307, 2364
MaeII	ACGT	1 cut(s)	1776
MaeIII	GTNAC	7 cut(s)	752, 1270, 1337, 1415, 1766, 2222, 2478
MfeI	CAATTG	1 cut(s)	1480
MflI	RGATCY	4 cut(s)	166, 1168, 1372, 2375
MhlI	GDGCHC	2 cut(s)	180, 2357
MlsI	TGGCCA	1 cut(s)	378
MluNI	TGGCCA	1 cut(s)	378
MlyI	GAGTC	4 cut(s)	85, 616, 1856, 2084
MmeI	TCCRAC	5 cut(s)	144, 1839, 1864, 1999, 2469
Mox20I	TGGCCA	1 cut(s)	378
Mph1103I	ATGCAT	1 cut(s)	1240
MroXI	GAANNNNTTC	2 cut(s)	411, 1083
MscI	TGGCCA	1 cut(s)	378
MseI	TTAA	7 cut(s)	149, 273, 1053, 1247, 1283, 1803, 2181
MslI	CAYNNNNRTG	3 cut(s)	1179, 1878, 2214
Msp20I	TGGCCA	1 cut(s)	378
MspA1I	CMGCKG	1 cut(s)	2152
MspCI	CTTAAG	1 cut(s)	272
MspI	CCGG	2 cut(s)	1251, 1289
MspR9I	CCNGG	2 cut(s)	742, 1312
MunI	CAATTG	1 cut(s)	1480
Mva1269I	GAATGC	2 cut(s)	2169, 2338
MvaI	CCWGG	2 cut(s)	742, 1312
MwoI	GCNNNNNNNGC	5 cut(s)	1100, 1235, 1520, 2146, 2184
NdeI	CATATG	1 cut(s)	1234
NheI	GCTAGC	1 cut(s)	2306
NlaIII	CATG	8 cut(s)	248, 337, 1062, 1184, 1883, 2213, 2421, 2458
NlaIV	GGNNCC	5 cut(s)	168, 766, 917, 1309, 2377
NmuCI	GTSAC	3 cut(s)	752, 1337, 1415
NsiI	ATGCAT	1 cut(s)	1240
NspI	RCATGY	4 cut(s)	337, 1062, 1184, 2421
PaeR7I	CTCGAG	1 cut(s)	1074
PagI	TCATGA	1 cut(s)	2454
PciI	ACATGT	1 cut(s)	1058
PcsI	WCGNNNNNNNCGW	1 cut(s)	631
PctI	GAATGC	2 cut(s)	2169, 2338
PdmI	GAANNNNTTC	2 cut(s)	411, 1083
PkrI	GCNGC	5 cut(s)	21, 1148, 1675, 1720, 2151
PleI	GAGTC	4 cut(s)	85, 616, 1856, 2083
PpsI	GAGTC	4 cut(s)	85, 616, 1856, 2083
Ppu21I	YACGTR	1 cut(s)	1777
PscI	ACATGT	1 cut(s)	1058
PshBI	ATTAAT	1 cut(s)	1803
Psp124BI	GAGCTC	1 cut(s)	180
Psp6I	CCWGG	2 cut(s)	740, 1310
PspFI	CCCAGC	1 cut(s)	2083
PspGI	CCWGG	2 cut(s)	740, 1310
PspN4I	GGNNCC	5 cut(s)	168, 766, 917, 1309, 2377
PspPI	GGNCC	6 cut(s)	323, 496, 578, 915, 1476, 2298
PstI	CTGCAG	2 cut(s)	72, 1675
PsuI	RGATCY	4 cut(s)	166, 1168, 1372, 2375
PvuII	CAGCTG	1 cut(s)	2152
RsaI	GTAC	3 cut(s)	867, 1556, 2441
RsaNI	GTAC	3 cut(s)	866, 1555, 2440
RseI	CAYNNNNRTG	3 cut(s)	1179, 1878, 2214
SacI	GAGCTC	1 cut(s)	180
SalI	GTCGAC	1 cut(s)	32
SaqAI	TTAA	7 cut(s)	149, 273, 1053, 1247, 1283, 1803, 2181
SatI	GCNGC	5 cut(s)	20, 1147, 1674, 1719, 2150
Sau96I	GGNCC	6 cut(s)	323, 496, 578, 915, 1476, 2298
ScaI	AGTACT	1 cut(s)	2441
SchI	GAGTC	4 cut(s)	85, 616, 1856, 2084
ScrFI	CCNGG	2 cut(s)	742, 1312
SduI	GDGCHC	2 cut(s)	180, 2357
SfaNI	GCATC	5 cut(s)	835, 848, 1771, 1786, 2233
SfcI	CTRYAG	3 cut(s)	68, 1671, 1832
Sfr274I	CTCGAG	1 cut(s)	1074
SinI	GGWCC	6 cut(s)	323, 496, 578, 915, 1476, 2298
SlaI	CTCGAG	1 cut(s)	1074
SmiMI	CAYNNNNRTG	3 cut(s)	1179, 1878, 2214
SmlI	CTYRAG	3 cut(s)	272, 1074, 1471
SmoI	CTYRAG	3 cut(s)	272, 1074, 1471
SsiI	CCGC	5 cut(s)	51, 436, 1147, 1976, 2246
SspI	AATATT	1 cut(s)	957
SspMI	CTAG	8 cut(s)	456, 1010, 1532, 1814, 2142, 2240, 2307, 2364
SstI	GAGCTC	1 cut(s)	180
StyD4I	CCNGG	2 cut(s)	740, 1310
StyI	CCWWGG	2 cut(s)	669, 1813
TaaI	ACNGT	9 cut(s)	493, 569, 664, 733, 1355, 1493, 1659, 2222, 2484
TaiI	ACGT	1 cut(s)	1779
TaqI	TCGA	5 cut(s)	33, 98, 1075, 1267, 1277
TatI	WGTACW	2 cut(s)	865, 2439
TauI	GCSGC	1 cut(s)	1149
Tru1I	TTAA	7 cut(s)	149, 273, 1053, 1247, 1283, 1803, 2181
Tru9I	TTAA	7 cut(s)	149, 273, 1053, 1247, 1283, 1803, 2181
TscAI	CASTG	3 cut(s)	498, 662, 1358
TseFI	GTSAC	3 cut(s)	752, 1337, 1415
TseI	GCWGC	4 cut(s)	19, 1673, 1718, 2149
Tsp45I	GTSAC	3 cut(s)	752, 1337, 1415
TspGWI	ACGGA	4 cut(s)	253, 694, 946, 1079
TspRI	CASTG	3 cut(s)	498, 662, 1358
Vha464I	CTTAAG	1 cut(s)	272
VpaK11BI	GGWCC	6 cut(s)	323, 496, 578, 915, 1476, 2298
VspI	ATTAAT	1 cut(s)	1803
XapI	RAATTY	8 cut(s)	4, 100, 424, 1279, 1623, 2233, 2269, 2342
XbaI	TCTAGA	2 cut(s)	455, 2239
XceI	RCATGY	4 cut(s)	337, 1062, 1184, 2421
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1523
XhoI	CTCGAG	1 cut(s)	1074
XmaJI	CCTAGG	1 cut(s)	1813
XmiI	GTMKAC	1 cut(s)	33
XmnI	GAANNNNTTC	2 cut(s)	411, 1083
XspI	CTAG	8 cut(s)	456, 1010, 1532, 1814, 2142, 2240, 2307, 2364
ZrmI	AGTACT	1 cut(s)	2441
Zsp2I	ATGCAT	1 cut(s)	1240

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.