Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0006499

Physical Location & Seq

Genomic Coordinates Reverse (-)

13937324 .. 13944684

Gene Structure 7361 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1151300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2436 bp

ATGAACTCCGAGACAGGGCAGCTCCCACCTAACCGGGTCGACCCGGAACAACCCAATTCTTGCTTTTTACAGAAGTTCAAGCTCTATGAAACTCGCTCGAATTTTTATTTGATAGGAAGGGACAAAAGCAGAACCTTTTGGAGGATTTTAAAGATTGACAGATTGGATCAATCGGAGTTAAACATTCTTGAAGATCCTGCAACATACTCGGATAATGAGTGCTATGACCTCCTGAAACGGATACATGAAGGAAACAAGCCGATGGGTGGACTTAAATTTATCACTGTTTGTTACGGAATCGTTGGGTTCGTGAAATTTTTGGGACCTTATTACATGATACTTATTACAAAAAGAAGGAAAATTGGTGCAATTTGTGGCCATACGATCTATGCAATTTCCAAGAGCGAGATGATTCCAGTTCCAAACCCTGCCGTGCGGTCAAAATTGGCCAATTCTAAGAATGATGAGAACAGATACAAGAAGCTCCTATGCTCGGTGGACCTCACAAAGGACTTCTTTTTCAGCTATTCATACAATGTTATGTCTAGTCTACAAAAGAACTTATGTGATAATCAGACAGGACCTCCCCTTTATGAAACAATGTTTGTTTGGAATGAGTATTTGACGCGTGGAATCCGATATTGTCTGAAGAATACTCTATGGACAGTTGCCTTAGTGTATGGATTCTTTAAACAGGTCGATCTTTCTGTATCTGGCAGGGATTTCAAGTTGACCCTCATTGCCAGACGTTCACGTCACTTTGCTGGCACCAGATATCTAAAGCGAGGTGTAAATGAGAAAGGTAGAGTAGCTAATGATGTTGAGACAGAACAGCTTGTTATTGAAGATGCTCCTGAAGGATGCCCAGTGCGAATAAGTTCTGTTGTGCAGCACCGAGGCTCAATTCCCCTTTTCTGGTCTCAGGAAACCTCTCGACTAAATATCAAACCTGATATAATATTATCAAGGAAGGATCATAATTACGAGGCCACAAGACTTCATTTTGAAAATCTTGTCCAGAGATATGGAGACCCAATAATTATTGTGAATCTGATTAAGACAAATGAGAAGAAGCCTCGAGAAACTATTCTCCGTGCAGAGTTTTCACATGCTATCAGATTTATTAATAGGAGTTTACCAAAAGAGAGCCGCCTGAGGTTTCTCCATTGGGATCTGCACCATCATGCCAGAAGCAAAGCTACCAATGTATTGGGACACCTCGGAAAAGTGGCTACTTATGCGTTGGGATTGACTGGAATCTTCTACTGTCAAGTAACCCCCAATTTAAGGCCTGTGGGATTATCTGGCTTTGAGAAAAATGATGATGTCGATGACTGCTTGTCGCATAGCTGTTCAAGTAAAGATGAGGATGCTGATAGTCGAGAAACAGAGATTAGCAATGGCAGTGATGGGGATGATGCAAGCATGAATTGCAATGTCACACCCATGATGTTTCAGAAAGGAGTCCTGAGAACCAATTGCATAGACTGTTTAGATCGCACAAACGTTGCCCAATATTGTTTTGGGCTAGTTGCTCTTGGACATCAGCTTCATGCTTTAGGATTTATAGAATCTCCGGATATTGATCTGGATAACCCTCTGGCTGAGGACTTGATGAGAGTTTATGAGACAATGGGAGACGTACTTGCACTACAATATGGCGGCTCTGCAGCTCATAACAAGATATTCTCTGAGACTAGAGGCCAGTGGAAGGCAGCAACTCAGTCCCAGGAGTTCTTTAGAACTCTACAGCGGTTTTACAGTAATGCCTACGTGGATAGTGTGAAACAAGATGCTATTAATGTATTCCTAGGGTACTTTCAACCACAACCTGGTAAACCACAACTGTGGGAATTGAATTCGGATCAACACAACAATGTTGGGAGGTCGTTTATCAAAAGGTCACTATCCGAGGGCCATATTCTCGGTGAAAGTGATTCCCCTATGACAAGTACAGAAGTTGTGCAAAGTCAACCTTTGTCTGAAATTGCACAAGGAAGTAACAGAGCGATTTCAGAGTCCGCACCAGTAATCTCAACTTGTGAAAGTGATATATCCGCTTGCAGGTTTACTCCCTCAATGCCTCGCAAGCAGATTTTCTGTGGGTTGCAAGAAGACGAATGCCTCCAGAGTGATCATATCATTTATGATGAACATGACGATGATTGCAACTTGTCAAATATTCTGGATGTGGACTGGTTGTCCTCATCAGGAAATTCTTGTGAAGAAATATGTGGAAGGTCTATGACCAGCCTTTCATCGGAGAATCTTGTGAACGGACCAAGGGTTGAAACAAGAACATCTGCAAGTGAATCTGGATCCATGAGAAAGGGAAAGGAGCAATGTGAAGCGGAGGTCACTCGTGATAATATGACAACTCCGTATTCAGCGGGCTTCATGAACTGGGTAGCTAATGGGGAGTTGCTGTTTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005770 GO:0005794 GO:0005811 GO:0006629 GO:0006644 GO:0006650 GO:0006661 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009987 GO:0010008 GO:0012505 GO:0016020 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0031090 GO:0031410 GO:0031901 GO:0031902 GO:0031982 GO:0031984 GO:0034593 GO:0034595 GO:0036092 GO:0042578 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043813 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046474 GO:0046486 GO:0046488 GO:0052866 GO:0071704 GO:0090407 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:0106018 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Syja_N

Protein Analysis

812

Amino Acids

91.85

Weight (kDa)

6.17

Isoelectric Point (pI)

46.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Syja_N	PF02383	98 - 396	2.8e-83	SacI homology domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006499)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14205 AT3G14205
fragaria_vesca	FvH4_6g35480 FvH4_6g35480 FvH4_6g35480
malus_domestica	MD09G1175500.v1.1 MD17G1151300.v1.1
prunus_persica	Prupe.3G034500_v2.0.a1
pyrus_communis	pycom09g09320 pycom17g14460
rosa_chinensis	RchiOBHm_Chr2g0147031
rosa_laevigata	RLG00000020240
rosa_multiflora	Rmu_co8447827.1_g000001 Rmu_sc0001880.1_g000033 Rmu_sc0036715.1_g000001
rosa_roxburghii	Rroxscaffold_2G00099750
rosa_rugosa	Rorug02G0398100 Rorug02G0398100 Rorug02G0398200
rosa_samantha	Rh2AG455200 Rh2BG467600 Rh2CG442600 Rh2DG476800 Rh2DG476900
rosa_wichuraiana	Rw2G037140 Rw2G037240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	753
Acc36I	ACCTGC	1 cut(s)	2055
AccB1I	GGYRCC	1 cut(s)	767
AccB7I	CCANNNNNTGG	1 cut(s)	1832
AccI	GTMKAC	2 cut(s)	39, 550
AccII	CGCG	1 cut(s)	628
AccIII	TCCGGA	1 cut(s)	1576
AciI	CCGC	8 cut(s)	436, 1150, 1662, 1753, 2022, 2058, 2351, 2390
AclI	AACGTT	1 cut(s)	1506
AclWI	GGATC	7 cut(s)	174, 188, 981, 1179, 1872, 2313, 2326
AcoI	YGGCCR	2 cut(s)	376, 447
AcsI	RAATTY	5 cut(s)	100, 275, 314, 1858, 2215
AcuI	CTGAAG	2 cut(s)	668, 876
AfaI	GTAC	3 cut(s)	1644, 1817, 1954
AflIII	ACRYGT	1 cut(s)	626
AgsI	TTSAA	9 cut(s)	79, 191, 727, 845, 1007, 1356, 1823, 1858, 2291
AhdI	GACNNNNNGTC	2 cut(s)	1339, 2200
AjiI	CACGTC	1 cut(s)	755
AjnI	CCWGG	2 cut(s)	1728, 1831
AleI	CACNNNNGTG	1 cut(s)	1846
Alw26I	GTCTC	7 cut(s)	5, 818, 924, 1023, 1622, 1632, 1688
AlwI	GGATC	7 cut(s)	174, 188, 981, 1179, 1872, 2313, 2326
Ama87I	CYCGRG	1 cut(s)	1077
Aor13HI	TCCGGA	1 cut(s)	1576
AoxI	GGCC	6 cut(s)	376, 447, 987, 1289, 1702, 1915
ApeKI	GCWGC	4 cut(s)	19, 889, 1670, 1715
ApoI	RAATTY	5 cut(s)	100, 275, 314, 1858, 2215
AseI	ATTAAT	2 cut(s)	1125, 1800
Asp700I	GAANNNNTTC	2 cut(s)	877, 1086
AspA2I	CCTAGG	1 cut(s)	1810
AspS9I	GGNCC	5 cut(s)	323, 499, 581, 1915, 2279
AsuC2I	CCSGG	2 cut(s)	35, 44
AsuHPI	GGTGA	1 cut(s)	1940
AvaI	CYCGRG	1 cut(s)	1077
AvaII	GGWCC	4 cut(s)	323, 499, 581, 2279
AvrII	CCTAGG	1 cut(s)	1810
AxyI	CCTNAGG	1 cut(s)	1154
BalI	TGGCCA	2 cut(s)	378, 449
BamHI	GGATCC	1 cut(s)	2318
BanI	GGYRCC	1 cut(s)	767
BarI	GAAGNNNNNNTAC	2 cut(s)	1183, 1215
BauI	CACGAG	1 cut(s)	2361
BbsI	GAAGAC	1 cut(s)	2121
BbvCI	CCTCAGC	1 cut(s)	1605
BbvI	GCAGC	4 cut(s)	31, 901, 1682, 1727
BccI	CCATC	3 cut(s)	256, 1188, 1403
BceAI	ACGGC	1 cut(s)	416
BcgI	CGANNNNNNTGC	2 cut(s)	189, 223
BciT130I	CCWGG	2 cut(s)	1730, 1833
BciVI	GTATCC	1 cut(s)	234
BclI	TGATCA	1 cut(s)	2134
BcnI	CCSGG	2 cut(s)	35, 44
BcoDI	GTCTC	7 cut(s)	5, 818, 924, 1023, 1622, 1632, 1688
BfaI	CTAG	4 cut(s)	546, 1529, 1698, 1811
BfmI	CTRYAG	2 cut(s)	1668, 1748
BfuAI	ACCTGC	1 cut(s)	2055
BfuI	GTATCC	1 cut(s)	234
BisI	GCNGC	6 cut(s)	20, 890, 1150, 1663, 1671, 1716
BlnI	CCTAGG	1 cut(s)	1810
BlsI	GCNGC	6 cut(s)	21, 891, 1151, 1664, 1672, 1717
Bme1390I	CCNGG	4 cut(s)	35, 44, 1730, 1833
Bme18I	GGWCC	4 cut(s)	323, 499, 581, 2279
BmeRI	GACNNNNNGTC	2 cut(s)	1339, 2200
BmeT110I	CYCGRG	1 cut(s)	1077
BmgBI	CACGTC	1 cut(s)	755
BmgT120I	GGNCC	5 cut(s)	323, 499, 581, 1915, 2279
BmiI	GGNNCC	3 cut(s)	324, 769, 2320
BmrFI	CCNGG	4 cut(s)	35, 44, 1730, 1833
BmrI	ACTGGG	2 cut(s)	860, 2413
BmsI	GCATC	5 cut(s)	838, 851, 1360, 1408, 1783
BmuI	ACTGGG	2 cut(s)	860, 2413
BpiI	GAAGAC	1 cut(s)	2121
BpmI	CTGGAG	1 cut(s)	2111
Bpu10I	CCTNAGC	1 cut(s)	1605
BpuMI	CCSGG	2 cut(s)	35, 44
BsaAI	YACGTR	1 cut(s)	1774
BsaBI	GATNNNNATC	1 cut(s)	1584
BsaI	GGTCTC	2 cut(s)	924, 1023
BsaJI	CCNNGG	6 cut(s)	895, 1219, 1728, 1810, 1911, 2282
BsaWI	WCCGGW	1 cut(s)	1576
BsaXI	ACNNNNNCTCC	3 cut(s)	568, 598, 2411
Bse1I	ACTGG	7 cut(s)	416, 866, 1258, 1705, 2027, 2201, 2408
Bse21I	CCTNAGG	1 cut(s)	1154
Bse3DI	GCAATG	4 cut(s)	738, 1405, 1441, 2348
Bse8I	GATNNNNATC	1 cut(s)	1584
BseAI	TCCGGA	1 cut(s)	1576
BseBI	CCWGG	2 cut(s)	1730, 1833
BseDI	CCNNGG	6 cut(s)	895, 1219, 1728, 1810, 1911, 2282
BseGI	GGATG	4 cut(s)	866, 1375, 1420, 2194
BseJI	GATNNNNATC	1 cut(s)	1584
BseMI	GCAATG	4 cut(s)	738, 1405, 1441, 2348
BseMII	CTCAG	6 cut(s)	935, 1145, 1460, 1596, 1683, 1736
BseNI	ACTGG	7 cut(s)	416, 866, 1258, 1705, 2027, 2201, 2408
BseXI	GCAGC	4 cut(s)	31, 901, 1682, 1727
BsgI	GTGCAG	3 cut(s)	908, 1116, 1160
Bsh1236I	CGCG	1 cut(s)	628
BshFI	GGCC	6 cut(s)	378, 449, 989, 1291, 1704, 1917
BshNI	GGYRCC	1 cut(s)	767
BsiHKCI	CYCGRG	1 cut(s)	1077
BsiSI	CCGG	3 cut(s)	34, 44, 1577
BslFI	GGGAC	4 cut(s)	134, 336, 1227, 1711
BsmAI	GTCTC	7 cut(s)	5, 818, 924, 1023, 1622, 1632, 1688
BsmBI	CGTCTC	1 cut(s)	1632
BsmFI	GGGAC	4 cut(s)	134, 336, 1227, 1711
BsmI	GAATGC	1 cut(s)	2126
BsnI	GGCC	6 cut(s)	378, 449, 989, 1291, 1704, 1917
Bso31I	GGTCTC	2 cut(s)	924, 1023
BsoBI	CYCGRG	1 cut(s)	1077
Bsp13I	TCCGGA	1 cut(s)	1576
BspACI	CCGC	8 cut(s)	436, 1150, 1662, 1753, 2022, 2058, 2351, 2390
BspANI	GGCC	6 cut(s)	378, 449, 989, 1291, 1704, 1917
BspCNI	CTCAG	6 cut(s)	934, 1146, 1461, 1597, 1684, 1735
BspEI	TCCGGA	1 cut(s)	1576
BspFNI	CGCG	1 cut(s)	628
BspHI	TCATGA	1 cut(s)	2397
BspLI	GGNNCC	3 cut(s)	324, 769, 2320
BspMAI	CTGCAG	1 cut(s)	1672
BspMI	ACCTGC	1 cut(s)	2055
BspPI	GGATC	7 cut(s)	174, 188, 981, 1179, 1872, 2313, 2326
BspT107I	GGYRCC	1 cut(s)	767
BspTNI	GGTCTC	2 cut(s)	924, 1023
BsrDI	GCAATG	4 cut(s)	738, 1405, 1441, 2348
BsrI	ACTGG	7 cut(s)	416, 866, 1258, 1705, 2027, 2201, 2408
BssECI	CCNNGG	6 cut(s)	895, 1219, 1728, 1810, 1911, 2282
BssSI	CACGAG	1 cut(s)	2361
BssT1I	CCWWGG	2 cut(s)	1810, 2282
Bst2BI	CACGAG	1 cut(s)	2361
Bst2UI	CCWGG	2 cut(s)	1730, 1833
Bst4CI	ACNGT	6 cut(s)	286, 667, 1268, 1490, 1763, 1848
BstAPI	GCANNNNNTGC	1 cut(s)	1431
BstBAI	YACGTR	1 cut(s)	1774
BstC8I	GCNNGC	5 cut(s)	766, 1423, 2062, 2090, 2392
BstDEI	CTNAG	8 cut(s)	456, 673, 921, 1154, 1469, 1605, 1692, 1722
BstENI	CCTNNNNNAGG	2 cut(s)	139, 506
BstF5I	GGATG	4 cut(s)	866, 1375, 1420, 2194
BstFNI	CGCG	1 cut(s)	628
BstMAI	GTCTC	7 cut(s)	5, 818, 924, 1023, 1622, 1632, 1688
BstMWI	GCNNNNNNNGC	3 cut(s)	1238, 1431, 2089
BstNI	CCWGG	2 cut(s)	1730, 1833
BstNSI	RCATGY	1 cut(s)	1112
BstSCI	CCNGG	4 cut(s)	33, 42, 1728, 1831
BstSFI	CTRYAG	2 cut(s)	1668, 1748
BstUI	CGCG	1 cut(s)	628
BstV1I	GCAGC	4 cut(s)	31, 901, 1682, 1727
BstV2I	GAAGAC	1 cut(s)	2121
BstX2I	RGATCY	3 cut(s)	193, 1171, 2318
BstXI	CCANNNNNNTGG	3 cut(s)	1025, 1210, 1848
BstYI	RGATCY	3 cut(s)	193, 1171, 2318
Bsu36I	CCTNAGG	1 cut(s)	1154
BsuI	GTATCC	1 cut(s)	234
BsuRI	GGCC	6 cut(s)	378, 449, 989, 1291, 1704, 1917
BtrI	CACGTC	1 cut(s)	755
BtsCI	GGATG	4 cut(s)	866, 1375, 1420, 2194
BtsI	GCAGTG	1 cut(s)	1411
BtsIMutI	CAGTG	4 cut(s)	282, 873, 1411, 1712
BveI	ACCTGC	1 cut(s)	2055
Cac8I	GCNNGC	5 cut(s)	766, 1423, 2062, 2090, 2392
CciI	TCATGA	1 cut(s)	2397
Cfr13I	GGNCC	5 cut(s)	323, 499, 581, 1915, 2279
CseI	GACGC	1 cut(s)	634
CsiI	ACCWGGT	1 cut(s)	1831
Csp6I	GTAC	3 cut(s)	1643, 1816, 1953
CviQI	GTAC	3 cut(s)	1643, 1816, 1953
DdeI	CTNAG	8 cut(s)	456, 673, 921, 1154, 1469, 1605, 1692, 1722
DraI	TTTAAA	2 cut(s)	150, 691
DrdI	GACNNNNNNGTC	1 cut(s)	753
DriI	GACNNNNNGTC	2 cut(s)	1339, 2200
DseDI	GACNNNNNNGTC	1 cut(s)	753
EaeI	YGGCCR	2 cut(s)	376, 447
Eam1105I	GACNNNNNGTC	2 cut(s)	1339, 2200
Eco130I	CCWWGG	2 cut(s)	1810, 2282
Eco147I	AGGCCT	1 cut(s)	1291
Eco31I	GGTCTC	2 cut(s)	924, 1023
Eco32I	GATATC	1 cut(s)	776
Eco47I	GGWCC	4 cut(s)	323, 499, 581, 2279
Eco57I	CTGAAG	2 cut(s)	668, 876
Eco81I	CCTNAGG	1 cut(s)	1154
Eco88I	CYCGRG	1 cut(s)	1077
EcoNI	CCTNNNNNAGG	2 cut(s)	139, 506
EcoO109I	RGGNCCY	2 cut(s)	323, 581
EcoRI	GAATTC	1 cut(s)	1858
EcoRII	CCWGG	2 cut(s)	1728, 1831
EcoRV	GATATC	1 cut(s)	776
EcoT14I	CCWWGG	2 cut(s)	1810, 2282
ErhI	CCWWGG	2 cut(s)	1810, 2282
Esp3I	CGTCTC	1 cut(s)	1632
FalI	AAGNNNNNCTT	4 cut(s)	500, 532, 1960, 1992
FaqI	GGGAC	4 cut(s)	134, 336, 1227, 1711
FauI	CCCGC	1 cut(s)	2383
FbaI	TGATCA	1 cut(s)	2134
FblI	GTMKAC	2 cut(s)	39, 550
Fnu4HI	GCNGC	6 cut(s)	20, 890, 1150, 1663, 1671, 1716
FokI	GGATG	4 cut(s)	873, 1382, 1427, 2201
Fsp4HI	GCNGC	6 cut(s)	20, 890, 1150, 1663, 1671, 1716
FspBI	CTAG	4 cut(s)	546, 1529, 1698, 1811
GluI	GCNGC	6 cut(s)	20, 890, 1150, 1663, 1671, 1716
GsuI	CTGGAG	1 cut(s)	2111
HaeIII	GGCC	6 cut(s)	378, 449, 989, 1291, 1704, 1917
HapII	CCGG	3 cut(s)	34, 44, 1577
HgaI	GACGC	1 cut(s)	634
HincII	GTYRAC	3 cut(s)	40, 732, 1973
HindII	GTYRAC	3 cut(s)	40, 732, 1973
HpaII	CCGG	3 cut(s)	34, 44, 1577
HphI	GGTGA	1 cut(s)	1940
HpyAV	CCTTC	7 cut(s)	111, 242, 348, 851, 964, 1705, 2232
HpyCH4III	ACNGT	6 cut(s)	286, 667, 1268, 1490, 1763, 1848
HpyCH4IV	ACGT	5 cut(s)	748, 754, 1506, 1641, 1773
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1238, 1431, 2089
HpyF3I	CTNAG	8 cut(s)	456, 673, 921, 1154, 1469, 1605, 1692, 1722
HpySE526I	ACGT	5 cut(s)	748, 754, 1506, 1641, 1773
Kpn2I	TCCGGA	1 cut(s)	1576
Ksp22I	TGATCA	1 cut(s)	2134
LmnI	GCTCC	4 cut(s)	27, 489, 856, 2338
Lsp1109I	GCAGC	4 cut(s)	31, 901, 1682, 1727
LweI	GCATC	5 cut(s)	838, 851, 1360, 1408, 1783
MabI	ACCWGGT	1 cut(s)	1831
MaeI	CTAG	4 cut(s)	546, 1529, 1698, 1811
MaeII	ACGT	5 cut(s)	748, 754, 1506, 1641, 1773
MaeIII	GTNAC	7 cut(s)	290, 755, 1273, 1438, 1902, 2000, 2356
MboII	GAAGA	7 cut(s)	203, 661, 857, 1081, 1252, 2126, 2237
MfeI	CAATTG	1 cut(s)	1477
MflI	RGATCY	3 cut(s)	193, 1171, 2318
MlsI	TGGCCA	2 cut(s)	378, 449
MluI	ACGCGT	1 cut(s)	626
MluNI	TGGCCA	2 cut(s)	378, 449
MlyI	GAGTC	2 cut(s)	1473, 2027
Mox20I	TGGCCA	2 cut(s)	378, 449
MroI	TCCGGA	1 cut(s)	1576
MroXI	GAANNNNTTC	2 cut(s)	877, 1086
MscI	TGGCCA	2 cut(s)	378, 449
MseI	TTAA	8 cut(s)	149, 179, 273, 690, 1056, 1125, 1286, 1800
MslI	CAYNNNNRTG	5 cut(s)	1182, 1445, 1846, 1875, 2160
Msp20I	TGGCCA	2 cut(s)	378, 449
MspA1I	CMGCKG	2 cut(s)	1753, 2390
MspI	CCGG	3 cut(s)	34, 44, 1577
MspR9I	CCNGG	4 cut(s)	35, 44, 1730, 1833
MunI	CAATTG	1 cut(s)	1477
Mva1269I	GAATGC	1 cut(s)	2126
MvaI	CCWGG	2 cut(s)	1730, 1833
MvnI	CGCG	1 cut(s)	628
MwoI	GCNNNNNNNGC	3 cut(s)	1238, 1431, 2089
NciI	CCSGG	2 cut(s)	35, 44
NlaIV	GGNNCC	3 cut(s)	324, 769, 2320
NmuCI	GTSAC	4 cut(s)	755, 1438, 1902, 2356
NspI	RCATGY	1 cut(s)	1112
OliI	CACNNNNGTG	1 cut(s)	1846
PaeR7I	CTCGAG	1 cut(s)	1077
PagI	TCATGA	1 cut(s)	2397
PceI	AGGCCT	1 cut(s)	1291
PcsI	WCGNNNNNNNCGW	1 cut(s)	306
PctI	GAATGC	1 cut(s)	2126
PdmI	GAANNNNTTC	2 cut(s)	877, 1086
PflMI	CCANNNNNTGG	1 cut(s)	1832
PkrI	GCNGC	6 cut(s)	21, 891, 1151, 1664, 1672, 1717
PleI	GAGTC	2 cut(s)	1472, 2026
PpsI	GAGTC	2 cut(s)	1472, 2026
Ppu21I	YACGTR	1 cut(s)	1774
PpuMI	RGGWCCY	2 cut(s)	323, 581
PshBI	ATTAAT	2 cut(s)	1125, 1800
Psp1406I	AACGTT	1 cut(s)	1506
Psp5II	RGGWCCY	2 cut(s)	323, 581
Psp6I	CCWGG	2 cut(s)	1728, 1831
PspGI	CCWGG	2 cut(s)	1728, 1831
PspN4I	GGNNCC	3 cut(s)	324, 769, 2320
PspPI	GGNCC	5 cut(s)	323, 499, 581, 1915, 2279
PspPPI	RGGWCCY	2 cut(s)	323, 581
PstI	CTGCAG	1 cut(s)	1672
PsuI	RGATCY	3 cut(s)	193, 1171, 2318
RsaI	GTAC	3 cut(s)	1644, 1817, 1954
RsaNI	GTAC	3 cut(s)	1643, 1816, 1953
RseI	CAYNNNNRTG	5 cut(s)	1182, 1445, 1846, 1875, 2160
SalI	GTCGAC	1 cut(s)	38
SaqAI	TTAA	8 cut(s)	149, 179, 273, 690, 1056, 1125, 1286, 1800
SatI	GCNGC	6 cut(s)	20, 890, 1150, 1663, 1671, 1716
Sau96I	GGNCC	5 cut(s)	323, 499, 581, 1915, 2279
SchI	GAGTC	2 cut(s)	1473, 2027
ScrFI	CCNGG	4 cut(s)	35, 44, 1730, 1833
SexAI	ACCWGGT	1 cut(s)	1831
SfaNI	GCATC	5 cut(s)	838, 851, 1360, 1408, 1783
SfcI	CTRYAG	2 cut(s)	1668, 1748
Sfr274I	CTCGAG	1 cut(s)	1077
SinI	GGWCC	4 cut(s)	323, 499, 581, 2279
SlaI	CTCGAG	1 cut(s)	1077
SmiMI	CAYNNNNRTG	5 cut(s)	1182, 1445, 1846, 1875, 2160
SmlI	CTYRAG	1 cut(s)	1077
SmoI	CTYRAG	1 cut(s)	1077
SseBI	AGGCCT	1 cut(s)	1291
SsiI	CCGC	8 cut(s)	436, 1150, 1662, 1753, 2022, 2058, 2351, 2390
SspI	AATATT	3 cut(s)	960, 1517, 2182
SspMI	CTAG	4 cut(s)	546, 1529, 1698, 1811
StuI	AGGCCT	1 cut(s)	1291
StyD4I	CCNGG	4 cut(s)	33, 42, 1728, 1831
StyI	CCWWGG	2 cut(s)	1810, 2282
TaaI	ACNGT	6 cut(s)	286, 667, 1268, 1490, 1763, 1848
TaiI	ACGT	5 cut(s)	751, 757, 1509, 1644, 1776
TaqI	TCGA	7 cut(s)	39, 98, 699, 934, 1078, 1329, 1381
TatI	WGTACW	1 cut(s)	1952
TauI	GCSGC	2 cut(s)	1152, 1665
Tru1I	TTAA	8 cut(s)	149, 179, 273, 690, 1056, 1125, 1286, 1800
Tru9I	TTAA	8 cut(s)	149, 179, 273, 690, 1056, 1125, 1286, 1800
TscAI	CASTG	4 cut(s)	289, 873, 1411, 1712
TseFI	GTSAC	4 cut(s)	755, 1438, 1902, 2356
TseI	GCWGC	4 cut(s)	19, 889, 1670, 1715
Tsp45I	GTSAC	4 cut(s)	755, 1438, 1902, 2356
TspGWI	ACGGA	5 cut(s)	253, 309, 1082, 2292, 2370
TspRI	CASTG	4 cut(s)	289, 873, 1411, 1712
Van91I	CCANNNNNTGG	1 cut(s)	1832
VpaK11BI	GGWCC	4 cut(s)	323, 499, 581, 2279
VspI	ATTAAT	2 cut(s)	1125, 1800
XagI	CCTNNNNNAGG	2 cut(s)	139, 506
XapI	RAATTY	5 cut(s)	100, 275, 314, 1858, 2215
XceI	RCATGY	1 cut(s)	1112
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1520
XhoI	CTCGAG	1 cut(s)	1077
XmaJI	CCTAGG	1 cut(s)	1810
XmiI	GTMKAC	2 cut(s)	39, 550
XmnI	GAANNNNTTC	2 cut(s)	877, 1086
XspI	CTAG	4 cut(s)	546, 1529, 1698, 1811

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.