WRKY transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g47800 FvH4_6g47800 FvH4_6g47800 |
| malus_domestica | MD09G1056600.v1.1 MD17G1054100.v1.1 |
| prunus_persica | Prupe.3G262100_v2.0.a1 |
| pyrus_communis | pycom111g04740 |
| rosa_chinensis | RchiOBHm_Chr2g0166991 |
| rosa_laevigata | RLG00000021687 |
| rosa_multiflora | Rmu_sc0010966.1_g000003 Rmu_sc0010966.1_g000004 Rmu_sc0025421.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00083830 |
| rosa_rugosa | Rorug02G0527200 Rorug02G0527300 Rorug02G0527300 |
| rosa_samantha | Rh2AG594100 Rh2BG605600 Rh2CG576500 Rh2DG617100 |
| rosa_wichuraiana | Rw2G049470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 711 |
| Acc16I | TGCGCA | 1 cut(s) | 1316 |
| Acc36I | ACCTGC | 2 cut(s) | 703, 727 |
| AccII | CGCG | 1 cut(s) | 80 |
| AciI | CCGC | 6 cut(s) | 5, 46, 78, 80, 96, 99 |
| AclWI | GGATC | 1 cut(s) | 109 |
| AcoI | YGGCCR | 1 cut(s) | 47 |
| AcsI | RAATTY | 2 cut(s) | 334, 1496 |
| AcuI | CTGAAG | 1 cut(s) | 1514 |
| AfaI | GTAC | 3 cut(s) | 633, 778, 1294 |
| AflIII | ACRYGT | 2 cut(s) | 466, 889 |
| AgsI | TTSAA | 4 cut(s) | 944, 975, 1190, 1444 |
| AjnI | CCWGG | 2 cut(s) | 115, 373 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 544, 576 |
| AleI | CACNNNNGTG | 1 cut(s) | 1457 |
| Alw26I | GTCTC | 2 cut(s) | 139, 1510 |
| AlwI | GGATC | 1 cut(s) | 109 |
| AoxI | GGCC | 6 cut(s) | 47, 71, 84, 230, 326, 456 |
| ApeKI | GCWGC | 8 cut(s) | 37, 530, 547, 1025, 1334, 1397, 1410, 1463 |
| ApoI | RAATTY | 2 cut(s) | 334, 1496 |
| AspLEI | GCGC | 1 cut(s) | 1317 |
| AspS9I | GGNCC | 3 cut(s) | 85, 119, 177 |
| AsuC2I | CCSGG | 2 cut(s) | 391, 412 |
| AsuHPI | GGTGA | 4 cut(s) | 355, 810, 1076, 1177 |
| AvaII | GGWCC | 2 cut(s) | 119, 177 |
| BanII | GRGCYC | 2 cut(s) | 386, 434 |
| BbsI | GAAGAC | 1 cut(s) | 1062 |
| BbvCI | CCTCAGC | 1 cut(s) | 42 |
| BbvI | GCAGC | 8 cut(s) | 49, 542, 559, 1012, 1321, 1409, 1422, 1475 |
| BccI | CCATC | 4 cut(s) | 334, 893, 1121, 1214 |
| BceAI | ACGGC | 1 cut(s) | 50 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 677, 711 |
| BciT130I | CCWGG | 2 cut(s) | 117, 375 |
| BcnI | CCSGG | 2 cut(s) | 391, 412 |
| BcoDI | GTCTC | 2 cut(s) | 139, 1510 |
| BfaI | CTAG | 3 cut(s) | 479, 527, 1401 |
| BfmI | CTRYAG | 1 cut(s) | 696 |
| BfuAI | ACCTGC | 2 cut(s) | 703, 727 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 46 |
| BlpI | GCTNAGC | 1 cut(s) | 9 |
| Bme1390I | CCNGG | 4 cut(s) | 117, 375, 391, 412 |
| Bme18I | GGWCC | 2 cut(s) | 119, 177 |
| BmgT120I | GGNCC | 3 cut(s) | 85, 119, 177 |
| BmiI | GGNNCC | 1 cut(s) | 109 |
| BmrFI | CCNGG | 4 cut(s) | 117, 375, 391, 412 |
| BmrI | ACTGGG | 1 cut(s) | 254 |
| BmsI | GCATC | 5 cut(s) | 489, 1057, 1145, 1295, 1483 |
| BmuI | ACTGGG | 1 cut(s) | 254 |
| BoxI | GACNNNNGTC | 1 cut(s) | 131 |
| BpiI | GAAGAC | 1 cut(s) | 1062 |
| BpmI | CTGGAG | 2 cut(s) | 126, 219 |
| Bpu10I | CCTNAGC | 2 cut(s) | 42, 936 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 9 |
| BpuEI | CTTGAG | 2 cut(s) | 121, 1005 |
| BpuMI | CCSGG | 2 cut(s) | 391, 412 |
| BsaI | GGTCTC | 2 cut(s) | 139, 1510 |
| BsaJI | CCNNGG | 6 cut(s) | 68, 78, 115, 374, 459, 627 |
| BsaWI | WCCGGW | 1 cut(s) | 1301 |
| Bse118I | RCCGGY | 2 cut(s) | 49, 824 |
| Bse1I | ACTGG | 3 cut(s) | 260, 719, 1520 |
| Bse3DI | GCAATG | 1 cut(s) | 1315 |
| BseBI | CCWGG | 2 cut(s) | 117, 375 |
| BseDI | CCNNGG | 6 cut(s) | 68, 78, 115, 374, 459, 627 |
| BseGI | GGATG | 5 cut(s) | 674, 1096, 1270, 1310, 1474 |
| BseMI | GCAATG | 1 cut(s) | 1315 |
| BseMII | CTCAG | 9 cut(s) | 56, 162, 168, 180, 200, 828, 990, 1131, 1458 |
| BseNI | ACTGG | 3 cut(s) | 260, 719, 1520 |
| BseX3I | CGGCCG | 1 cut(s) | 47 |
| BseXI | GCAGC | 8 cut(s) | 49, 542, 559, 1012, 1321, 1409, 1422, 1475 |
| BsgI | GTGCAG | 2 cut(s) | 459, 1055 |
| Bsh1236I | CGCG | 1 cut(s) | 80 |
| Bsh1285I | CGRYCG | 1 cut(s) | 50 |
| BshFI | GGCC | 6 cut(s) | 49, 73, 86, 232, 328, 458 |
| BsiEI | CGRYCG | 1 cut(s) | 50 |
| BsiSI | CCGG | 5 cut(s) | 50, 390, 411, 825, 1302 |
| BslFI | GGGAC | 1 cut(s) | 353 |
| BsmAI | GTCTC | 2 cut(s) | 139, 1510 |
| BsmFI | GGGAC | 1 cut(s) | 353 |
| BsnI | GGCC | 6 cut(s) | 49, 73, 86, 232, 328, 458 |
| Bso31I | GGTCTC | 2 cut(s) | 139, 1510 |
| Bsp1286I | GDGCHC | 2 cut(s) | 386, 434 |
| Bsp1407I | TGTACA | 2 cut(s) | 776, 1292 |
| Bsp143I | GATC | 3 cut(s) | 101, 703, 1207 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 9 |
| Bsp19I | CCATGG | 1 cut(s) | 627 |
| BspACI | CCGC | 6 cut(s) | 5, 46, 78, 80, 96, 99 |
| BspANI | GGCC | 6 cut(s) | 49, 73, 86, 232, 328, 458 |
| BspCNI | CTCAG | 9 cut(s) | 55, 161, 167, 179, 199, 829, 991, 1132, 1459 |
| BspFNI | CGCG | 1 cut(s) | 80 |
| BspLI | GGNNCC | 1 cut(s) | 109 |
| BspMAI | CTGCAG | 1 cut(s) | 700 |
| BspMI | ACCTGC | 2 cut(s) | 703, 727 |
| BspPI | GGATC | 1 cut(s) | 109 |
| BspQI | GCTCTTC | 1 cut(s) | 1536 |
| BspTNI | GGTCTC | 2 cut(s) | 139, 1510 |
| BsrDI | GCAATG | 1 cut(s) | 1315 |
| BsrFI | RCCGGY | 2 cut(s) | 49, 824 |
| BsrGI | TGTACA | 2 cut(s) | 776, 1292 |
| BsrI | ACTGG | 3 cut(s) | 260, 719, 1520 |
| BssAI | RCCGGY | 2 cut(s) | 49, 824 |
| BssECI | CCNNGG | 6 cut(s) | 68, 78, 115, 374, 459, 627 |
| BssMI | GATC | 3 cut(s) | 101, 703, 1207 |
| BssT1I | CCWWGG | 2 cut(s) | 459, 627 |
| Bst2UI | CCWGG | 2 cut(s) | 117, 375 |
| Bst4CI | ACNGT | 5 cut(s) | 367, 1052, 1165, 1440, 1456 |
| Bst6I | CTCTTC | 3 cut(s) | 296, 955, 1536 |
| BstAUI | TGTACA | 2 cut(s) | 776, 1292 |
| BstC8I | GCNNGC | 5 cut(s) | 112, 408, 456, 504, 1319 |
| BstDSI | CCRYGG | 2 cut(s) | 78, 627 |
| BstF5I | GGATG | 5 cut(s) | 674, 1096, 1270, 1310, 1474 |
| BstFNI | CGCG | 1 cut(s) | 80 |
| BstHHI | GCGC | 1 cut(s) | 1317 |
| BstKTI | GATC | 3 cut(s) | 104, 706, 1210 |
| BstMAI | GTCTC | 2 cut(s) | 139, 1510 |
| BstMBI | GATC | 3 cut(s) | 101, 703, 1207 |
| BstMCI | CGRYCG | 1 cut(s) | 50 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 43, 46, 325, 403, 1314, 1430 |
| BstNI | CCWGG | 2 cut(s) | 117, 375 |
| BstNSI | RCATGY | 2 cut(s) | 470, 1325 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 131 |
| BstSCI | CCNGG | 4 cut(s) | 115, 373, 389, 410 |
| BstSFI | CTRYAG | 1 cut(s) | 696 |
| BstUI | CGCG | 1 cut(s) | 80 |
| BstV1I | GCAGC | 8 cut(s) | 49, 542, 559, 1012, 1321, 1409, 1422, 1475 |
| BstV2I | GAAGAC | 1 cut(s) | 1062 |
| BstX2I | RGATCY | 1 cut(s) | 101 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1459 |
| BstYI | RGATCY | 1 cut(s) | 101 |
| BstZI | CGGCCG | 1 cut(s) | 47 |
| BsuRI | GGCC | 6 cut(s) | 49, 73, 86, 232, 328, 458 |
| BtgI | CCRYGG | 2 cut(s) | 78, 627 |
| BtsCI | GGATG | 5 cut(s) | 674, 1096, 1270, 1310, 1474 |
| BtsI | GCAGTG | 2 cut(s) | 471, 754 |
| BtsIMutI | CAGTG | 3 cut(s) | 471, 754, 1057 |
| BveI | ACCTGC | 2 cut(s) | 703, 727 |
| Cac8I | GCNNGC | 5 cut(s) | 112, 408, 456, 504, 1319 |
| CfoI | GCGC | 1 cut(s) | 1317 |
| Cfr10I | RCCGGY | 2 cut(s) | 49, 824 |
| Cfr13I | GGNCC | 3 cut(s) | 85, 119, 177 |
| Cfr42I | CCGCGG | 1 cut(s) | 81 |
| Csp6I | GTAC | 3 cut(s) | 632, 777, 1293 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 360, 395 |
| CviAII | CATG | 7 cut(s) | 238, 467, 628, 680, 866, 984, 1322 |
| CviQI | GTAC | 3 cut(s) | 632, 777, 1293 |
| DpnI | GATC | 3 cut(s) | 103, 705, 1209 |
| DpnII | GATC | 3 cut(s) | 101, 703, 1207 |
| EaeI | YGGCCR | 1 cut(s) | 47 |
| EagI | CGGCCG | 1 cut(s) | 47 |
| Eam1104I | CTCTTC | 3 cut(s) | 296, 955, 1536 |
| EarI | CTCTTC | 3 cut(s) | 296, 955, 1536 |
| EciI | GGCGGA | 1 cut(s) | 114 |
| EclXI | CGGCCG | 1 cut(s) | 47 |
| Eco130I | CCWWGG | 2 cut(s) | 459, 627 |
| Eco147I | AGGCCT | 4 cut(s) | 73, 232, 328, 458 |
| Eco24I | GRGCYC | 2 cut(s) | 386, 434 |
| Eco31I | GGTCTC | 2 cut(s) | 139, 1510 |
| Eco47I | GGWCC | 2 cut(s) | 119, 177 |
| Eco52I | CGGCCG | 1 cut(s) | 47 |
| Eco57I | CTGAAG | 1 cut(s) | 1514 |
| EcoO109I | RGGNCCY | 2 cut(s) | 85, 177 |
| EcoRII | CCWGG | 2 cut(s) | 115, 373 |
| EcoT14I | CCWWGG | 2 cut(s) | 459, 627 |
| EcoT38I | GRGCYC | 2 cut(s) | 386, 434 |
| ErhI | CCWWGG | 2 cut(s) | 459, 627 |
| FaeI | CATG | 7 cut(s) | 241, 470, 631, 683, 869, 987, 1325 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 544, 576 |
| FaqI | GGGAC | 1 cut(s) | 353 |
| FatI | CATG | 7 cut(s) | 237, 466, 627, 679, 865, 983, 1321 |
| FauNDI | CATATG | 1 cut(s) | 921 |
| FokI | GGATG | 5 cut(s) | 661, 1103, 1257, 1317, 1461 |
| FriOI | GRGCYC | 2 cut(s) | 386, 434 |
| FspBI | CTAG | 3 cut(s) | 479, 527, 1401 |
| FspI | TGCGCA | 1 cut(s) | 1316 |
| GlaI | GCGC | 1 cut(s) | 1316 |
| GsuI | CTGGAG | 2 cut(s) | 126, 219 |
| HaeIII | GGCC | 6 cut(s) | 49, 73, 86, 232, 328, 458 |
| HapII | CCGG | 5 cut(s) | 50, 390, 411, 825, 1302 |
| HhaI | GCGC | 1 cut(s) | 1317 |
| Hin1II | CATG | 7 cut(s) | 241, 470, 631, 683, 869, 987, 1325 |
| Hin6I | GCGC | 1 cut(s) | 1315 |
| HinP1I | GCGC | 1 cut(s) | 1315 |
| HindIII | AAGCTT | 3 cut(s) | 139, 579, 938 |
| HpaII | CCGG | 5 cut(s) | 50, 390, 411, 825, 1302 |
| HphI | GGTGA | 4 cut(s) | 355, 810, 1076, 1177 |
| Hpy166II | GTNNAC | 4 cut(s) | 779, 818, 953, 1293 |
| Hpy188III | TCNNGA | 1 cut(s) | 105 |
| Hpy8I | GTNNAC | 4 cut(s) | 779, 818, 953, 1293 |
| HpyAV | CCTTC | 6 cut(s) | 84, 190, 266, 681, 1079, 1110 |
| HpyCH4III | ACNGT | 5 cut(s) | 367, 1052, 1165, 1440, 1456 |
| HpyCH4IV | ACGT | 1 cut(s) | 889 |
| HpyCH4V | TGCA | 8 cut(s) | 422, 476, 496, 502, 698, 1036, 1070, 1308 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 43, 46, 325, 403, 1314, 1430 |
| HpySE526I | ACGT | 1 cut(s) | 889 |
| Hsp92II | CATG | 7 cut(s) | 241, 470, 631, 683, 869, 987, 1325 |
| HspAI | GCGC | 1 cut(s) | 1315 |
| KspI | CCGCGG | 1 cut(s) | 81 |
| Kzo9I | GATC | 3 cut(s) | 101, 703, 1207 |
| LguI | GCTCTTC | 1 cut(s) | 1536 |
| LmnI | GCTCC | 4 cut(s) | 107, 200, 538, 1033 |
| Lsp1109I | GCAGC | 8 cut(s) | 49, 542, 559, 1012, 1321, 1409, 1422, 1475 |
| LweI | GCATC | 5 cut(s) | 489, 1057, 1145, 1295, 1483 |
| MaeI | CTAG | 3 cut(s) | 479, 527, 1401 |
| MaeII | ACGT | 1 cut(s) | 889 |
| MaeIII | GTNAC | 6 cut(s) | 343, 469, 1038, 1046, 1165, 1223 |
| MalI | GATC | 3 cut(s) | 103, 705, 1209 |
| MboI | GATC | 3 cut(s) | 101, 703, 1207 |
| MboII | GAAGA | 8 cut(s) | 136, 313, 510, 972, 1067, 1094, 1520, 1553 |
| MflI | RGATCY | 1 cut(s) | 101 |
| MhlI | GDGCHC | 2 cut(s) | 386, 434 |
| MluCI | AATT | 4 cut(s) | 334, 490, 1496, 1548 |
| MlyI | GAGTC | 7 cut(s) | 14, 121, 146, 158, 340, 551, 972 |
| MmeI | TCCRAC | 1 cut(s) | 946 |
| MseI | TTAA | 4 cut(s) | 315, 399, 741, 1485 |
| MslI | CAYNNNNRTG | 2 cut(s) | 864, 1457 |
| MspA1I | CMGCKG | 4 cut(s) | 46, 80, 1466, 1534 |
| MspI | CCGG | 5 cut(s) | 50, 390, 411, 825, 1302 |
| MspR9I | CCNGG | 4 cut(s) | 117, 375, 391, 412 |
| MvaI | CCWGG | 2 cut(s) | 117, 375 |
| MvnI | CGCG | 1 cut(s) | 80 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 43, 46, 325, 403, 1314, 1430 |
| NciI | CCSGG | 2 cut(s) | 391, 412 |
| NcoI | CCATGG | 1 cut(s) | 627 |
| NdeI | CATATG | 1 cut(s) | 921 |
| NdeII | GATC | 3 cut(s) | 101, 703, 1207 |
| NlaIII | CATG | 7 cut(s) | 241, 470, 631, 683, 869, 987, 1325 |
| NlaIV | GGNNCC | 1 cut(s) | 109 |
| NmuCI | GTSAC | 4 cut(s) | 343, 469, 1046, 1165 |
| NsbI | TGCGCA | 1 cut(s) | 1316 |
| NspI | RCATGY | 2 cut(s) | 470, 1325 |
| OliI | CACNNNNGTG | 1 cut(s) | 1457 |
| PceI | AGGCCT | 4 cut(s) | 73, 232, 328, 458 |
| PciI | ACATGT | 1 cut(s) | 466 |
| PciSI | GCTCTTC | 1 cut(s) | 1536 |
| PfeI | GAWTC | 3 cut(s) | 926, 971, 1264 |
| PleI | GAGTC | 7 cut(s) | 14, 121, 146, 158, 340, 550, 971 |
| PpsI | GAGTC | 7 cut(s) | 14, 121, 146, 158, 340, 550, 971 |
| PpuMI | RGGWCCY | 1 cut(s) | 177 |
| PscI | ACATGT | 1 cut(s) | 466 |
| PshAI | GACNNNNGTC | 1 cut(s) | 131 |
| PsiI | TTATAA | 1 cut(s) | 711 |
| Psp5II | RGGWCCY | 1 cut(s) | 177 |
| Psp6I | CCWGG | 2 cut(s) | 115, 373 |
| PspGI | CCWGG | 2 cut(s) | 115, 373 |
| PspN4I | GGNNCC | 1 cut(s) | 109 |
| PspPI | GGNCC | 3 cut(s) | 85, 119, 177 |
| PspPPI | RGGWCCY | 1 cut(s) | 177 |
| PstI | CTGCAG | 1 cut(s) | 700 |
| PsuI | RGATCY | 1 cut(s) | 101 |
| PvuII | CAGCTG | 2 cut(s) | 1466, 1534 |
| RsaI | GTAC | 3 cut(s) | 633, 778, 1294 |
| RsaNI | GTAC | 3 cut(s) | 632, 777, 1293 |
| RseI | CAYNNNNRTG | 2 cut(s) | 864, 1457 |
| SacII | CCGCGG | 1 cut(s) | 81 |
| SapI | GCTCTTC | 1 cut(s) | 1536 |
| SaqAI | TTAA | 4 cut(s) | 315, 399, 741, 1485 |
| Sau3AI | GATC | 3 cut(s) | 101, 703, 1207 |
| Sau96I | GGNCC | 3 cut(s) | 85, 119, 177 |
| SchI | GAGTC | 7 cut(s) | 14, 121, 146, 158, 340, 551, 972 |
| ScrFI | CCNGG | 4 cut(s) | 117, 375, 391, 412 |
| SduI | GDGCHC | 2 cut(s) | 386, 434 |
| SfaNI | GCATC | 5 cut(s) | 489, 1057, 1145, 1295, 1483 |
| SfcI | CTRYAG | 1 cut(s) | 696 |
| Sfr303I | CCGCGG | 1 cut(s) | 81 |
| SgrBI | CCGCGG | 1 cut(s) | 81 |
| SinI | GGWCC | 2 cut(s) | 119, 177 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 864, 1457 |
| SmlI | CTYRAG | 2 cut(s) | 136, 1020 |
| SmoI | CTYRAG | 2 cut(s) | 136, 1020 |
| Sse9I | AATT | 4 cut(s) | 334, 490, 1496, 1548 |
| SseBI | AGGCCT | 4 cut(s) | 73, 232, 328, 458 |
| SsiI | CCGC | 6 cut(s) | 5, 46, 78, 80, 96, 99 |
| SspMI | CTAG | 3 cut(s) | 479, 527, 1401 |
| StuI | AGGCCT | 4 cut(s) | 73, 232, 328, 458 |
| StyD4I | CCNGG | 4 cut(s) | 115, 373, 389, 410 |
| StyI | CCWWGG | 2 cut(s) | 459, 627 |
| TaaI | ACNGT | 5 cut(s) | 367, 1052, 1165, 1440, 1456 |
| TaiI | ACGT | 1 cut(s) | 892 |
| TaqI | TCGA | 1 cut(s) | 23 |
| TasI | AATT | 4 cut(s) | 334, 490, 1496, 1548 |
| TatI | WGTACW | 2 cut(s) | 776, 1292 |
| TauI | GCSGC | 3 cut(s) | 8, 49, 99 |
| TfiI | GAWTC | 3 cut(s) | 926, 971, 1264 |
| Tru1I | TTAA | 4 cut(s) | 315, 399, 741, 1485 |
| Tru9I | TTAA | 4 cut(s) | 315, 399, 741, 1485 |
| TscAI | CASTG | 3 cut(s) | 478, 754, 1057 |
| TseFI | GTSAC | 4 cut(s) | 343, 469, 1046, 1165 |
| TseI | GCWGC | 8 cut(s) | 37, 530, 547, 1025, 1334, 1397, 1410, 1463 |
| Tsp45I | GTSAC | 4 cut(s) | 343, 469, 1046, 1165 |
| TspDTI | ATGAA | 6 cut(s) | 285, 347, 510, 591, 663, 1113 |
| TspRI | CASTG | 3 cut(s) | 478, 754, 1057 |
| VpaK11BI | GGWCC | 2 cut(s) | 119, 177 |
| XapI | RAATTY | 2 cut(s) | 334, 1496 |
| XceI | RCATGY | 2 cut(s) | 470, 1325 |
| XspI | CTAG | 3 cut(s) | 479, 527, 1401 |