Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0010588

Physical Location & Seq

Genomic Coordinates Reverse (-)

6424713 .. 6428528

Gene Structure 3816 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00083830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGGCGGCTAAGCACCAGGACTCAATTTCAGCACCGCAACCTCAGCGGCCGGTAATAACACTTCCTCCGAGGCCTTCGGCGGAGGCCCTTTTCGGCGGCGGATCTGGAGCCAGCCCAGGTCCGATGACCCTGGTCTCAAGCTTCTTCTCCGACTCTGGGTATGACTCGGAGTTCAGGTCCTTCTCTCAGCTTCTTGCTGGAGCTATGGGGTCGCCTTTGGGGCAAACCAGGCCAATCATGTTTGGACAGAACCAAAACCCAGTTGGTAAAGAAGGCGGTGGCTCTGAAAATGGAGGTGAGAAGAGTTCTGGGTTTAAGCAGAGTAGGCCTATGAATTTGATGGTGACTCACTCGCCATTGTTTACTGTCCCACCTGGGTTGAGCCCCTCCGGGTTGCTTAACTCGCCTGCGGGGTTCTTTGCACCTCCGAGCCCATTTGGAATATCACACCAGCAGGCCTTGGCACATGTCACTGCACTAGCTCAATCTAATATGCAGATGCAAGCTGATTATCAATCTTCTTTAGTAGCAGCTCCCACAGAGTCGCAGACAAGTAATCCACCCTCAAACCCCAATGAAGCTTCTCAACAGCAGACAGCACCCTCAACATCTGAACTTGGAAGTTCGATGGTGCAATCATTAGAGGCCTCTCATCCTGATAAAAAATACCCTTCATCCCATGCCACTGATAAACCTGCAGATGATCGTTATAACTGGCGAAAATATGGGCAGAAGCAGGTTAAGGGCAGTGAATATCCGCGAAGCTACTATAAATGCACACATCTGAACTGTCCTGTCAAAAAGAAAGTTGAGCGTTCTCCTACTGGTGAAATAACTGAGATTATCTACAAAGGGCAACATGACCATGAGCCACCTCAACCCAATAAACGTGCAAAAGATGGTGGTGGTCAGAATGGACATATGGATTCTCAGACAAAGCTTGAAAATGGTTTACAAAGAAGGGATGGAGATTCAAACAGGTCTTCTGAAGCTGTGCCTGAGAGGGAGTATGAGCATACTCAAGCTGCTCCTGTGCAGTTACCAAGTGACAGTGAAGACTTGGGTGATGGGGAAACCAGAGAAGAAGGGGATGTTGATGAACCTAATCCAAAGAGAAGGAATATTGATGGTGTTGCATCTGAGGTAGCTTTGCCTCACAAGACGGTGACAGAACCTAAAATCATTGTGCAAACAAGGAGTGAAGTTGATCTTCTTGATGATGGTTACAGGTGGAGAAAGTATGGGCAGAAAGTAGTCAAAGGGAATCCTCATCCAAGAAGCTATTACAAGTGCACATACACCGGCTGCAATGTGCGCAAGCATGTTGAGAGAGCTGCTAGTGACCCCAAAGCTGTCATAACCACATACGAGGGCAAACACAACCACGATGTTCCTGCAGCTAGAAACAGTAGCCACAACATAGCCAATAACAATGCCTCACAGTTCAAACCACCCACAGTGGTGGCAGCCGAGAAGCATCCCCTACTTAAAGGGAGAGAATTTGGCAACAATGACCAGAGACCAGTACTTCTTCAGCTGAAAGAAGAACAAATCGCTGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

520

Amino Acids

56.61

Weight (kDa)

7.32

Isoelectric Point (pI)

60.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	234 - 290	1.8e-25	WRKY DNA -binding domain
WRKY	PF03106	406 - 463	1.2e-26	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010588)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g47800 FvH4_6g47800 FvH4_6g47800
malus_domestica	MD09G1056600.v1.1 MD17G1054100.v1.1
prunus_persica	Prupe.3G262100_v2.0.a1
pyrus_communis	pycom111g04740
rosa_chinensis	RchiOBHm_Chr2g0166991
rosa_laevigata	RLG00000021687
rosa_multiflora	Rmu_sc0010966.1_g000003 Rmu_sc0010966.1_g000004 Rmu_sc0025421.1_g000004
rosa_roxburghii	Rroxscaffold_2G00083830
rosa_rugosa	Rorug02G0527200 Rorug02G0527300 Rorug02G0527300
rosa_samantha	Rh2AG594100 Rh2BG605600 Rh2CG576500 Rh2DG617100
rosa_wichuraiana	Rw2G049470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	711
Acc16I	TGCGCA	1 cut(s)	1316
Acc36I	ACCTGC	2 cut(s)	703, 727
AccII	CGCG	1 cut(s)	760
AciI	CCGC	9 cut(s)	5, 35, 46, 80, 96, 99, 276, 410, 758
AclWI	GGATC	1 cut(s)	109
AcoI	YGGCCR	1 cut(s)	47
AcsI	RAATTY	2 cut(s)	334, 1499
AcuI	CTGAAG	2 cut(s)	1008, 1517
AfaI	GTAC	1 cut(s)	1527
AfiI	CCNNNNNNNGG	1 cut(s)	156
AflIII	ACRYGT	1 cut(s)	466
AgsI	TTSAA	3 cut(s)	944, 975, 1447
AjnI	CCWGG	5 cut(s)	15, 115, 129, 227, 373
AleI	CACNNNNGTG	1 cut(s)	1460
Alw21I	GWGCWC	1 cut(s)	1295
Alw26I	GTCTC	2 cut(s)	139, 1513
Alw44I	GTGCAC	1 cut(s)	1291
AlwI	GGATC	1 cut(s)	109
AoxI	GGCC	7 cut(s)	47, 71, 84, 230, 326, 456, 645
ApaLI	GTGCAC	1 cut(s)	1291
ApeKI	GCWGC	6 cut(s)	530, 1025, 1305, 1334, 1397, 1466
ApoI	RAATTY	2 cut(s)	334, 1499
AspLEI	GCGC	1 cut(s)	1317
AspS9I	GGNCC	3 cut(s)	85, 119, 177
AsuC2I	CCSGG	1 cut(s)	391
AsuHPI	GGTGA	5 cut(s)	308, 355, 839, 1076, 1177
AvaII	GGWCC	2 cut(s)	119, 177
BaeGI	GKGCMC	1 cut(s)	1295
BanII	GRGCYC	2 cut(s)	386, 434
BarI	GAAGNNNNNNTAC	2 cut(s)	45, 77
BbsI	GAAGAC	2 cut(s)	975, 1062
Bbv12I	GWGCWC	1 cut(s)	1295
BbvCI	CCTCAGC	1 cut(s)	42
BbvI	GCAGC	6 cut(s)	542, 1012, 1292, 1321, 1409, 1478
BccI	CCATC	7 cut(s)	334, 622, 893, 959, 1061, 1121, 1214
BcgI	CGANNNNNNTGC	2 cut(s)	1376, 1410
BciT130I	CCWGG	5 cut(s)	17, 117, 131, 229, 375
BcnI	CCSGG	1 cut(s)	391
BcoDI	GTCTC	2 cut(s)	139, 1513
BfaI	CTAG	3 cut(s)	479, 1338, 1401
BfmI	CTRYAG	2 cut(s)	696, 1395
BfuAI	ACCTGC	2 cut(s)	703, 727
BglI	GCCNNNNNGGC	1 cut(s)	220
BisI	GCNGC	9 cut(s)	6, 47, 97, 531, 1026, 1306, 1335, 1398, 1467
BlpI	GCTNAGC	1 cut(s)	9
BlsI	GCNGC	9 cut(s)	7, 48, 98, 532, 1027, 1307, 1336, 1399, 1468
BmcAI	AGTACT	1 cut(s)	1527
Bme1390I	CCNGG	6 cut(s)	17, 117, 131, 229, 375, 391
Bme18I	GGWCC	2 cut(s)	119, 177
BmgT120I	GGNCC	3 cut(s)	85, 119, 177
BmiI	GGNNCC	1 cut(s)	109
BmrFI	CCNGG	6 cut(s)	17, 117, 131, 229, 375, 391
BmrI	ACTGGG	1 cut(s)	254
BmsI	GCATC	3 cut(s)	489, 1145, 1486
BmuI	ACTGGG	1 cut(s)	254
BoxI	GACNNNNGTC	1 cut(s)	131
BpiI	GAAGAC	2 cut(s)	975, 1062
BpmI	CTGGAG	2 cut(s)	126, 219
Bpu10I	CCTNAGC	1 cut(s)	42
Bpu1102I	GCTNAGC	1 cut(s)	9
BpuEI	CTTGAG	2 cut(s)	121, 1005
BpuMI	CCSGG	1 cut(s)	391
BsaI	GGTCTC	2 cut(s)	139, 1513
BsaJI	CCNNGG	5 cut(s)	68, 115, 129, 374, 459
BsaXI	ACNNNNNCTCC	4 cut(s)	49, 79, 161, 191
Bsc4I	CCNNNNNNNGG	1 cut(s)	156
Bse118I	RCCGGY	2 cut(s)	49, 1301
Bse1I	ACTGG	4 cut(s)	260, 719, 829, 1523
Bse3DI	GCAATG	1 cut(s)	1315
BseBI	CCWGG	5 cut(s)	17, 117, 131, 229, 375
BseDI	CCNNGG	5 cut(s)	68, 115, 129, 374, 459
BseGI	GGATG	6 cut(s)	652, 674, 970, 1096, 1270, 1477
BseLI	CCNNNNNNNGG	1 cut(s)	156
BseMI	GCAATG	1 cut(s)	1315
BseMII	CTCAG	6 cut(s)	56, 200, 828, 944, 990, 1131
BseNI	ACTGG	4 cut(s)	260, 719, 829, 1523
BseSI	GKGCMC	1 cut(s)	1295
BseX3I	CGGCCG	1 cut(s)	47
BseXI	GCAGC	6 cut(s)	542, 1012, 1292, 1321, 1409, 1478
BsgI	GTGCAG	2 cut(s)	459, 1055
Bsh1236I	CGCG	1 cut(s)	760
Bsh1285I	CGRYCG	1 cut(s)	50
BshFI	GGCC	7 cut(s)	49, 73, 86, 232, 328, 458, 647
BsiEI	CGRYCG	1 cut(s)	50
BsiHKAI	GWGCWC	1 cut(s)	1295
BsiSI	CCGG	3 cut(s)	50, 390, 1302
BslFI	GGGAC	1 cut(s)	353
BslI	CCNNNNNNNGG	1 cut(s)	156
BsmAI	GTCTC	2 cut(s)	139, 1513
BsmFI	GGGAC	1 cut(s)	353
BsnI	GGCC	7 cut(s)	49, 73, 86, 232, 328, 458, 647
Bso31I	GGTCTC	2 cut(s)	139, 1513
Bsp1286I	GDGCHC	3 cut(s)	386, 434, 1295
Bsp143I	GATC	3 cut(s)	101, 703, 1207
Bsp1720I	GCTNAGC	1 cut(s)	9
BspACI	CCGC	9 cut(s)	5, 35, 46, 80, 96, 99, 276, 410, 758
BspANI	GGCC	7 cut(s)	49, 73, 86, 232, 328, 458, 647
BspCNI	CTCAG	6 cut(s)	55, 199, 829, 943, 991, 1132
BspFNI	CGCG	1 cut(s)	760
BspLI	GGNNCC	1 cut(s)	109
BspMAI	CTGCAG	2 cut(s)	700, 1399
BspMI	ACCTGC	2 cut(s)	703, 727
BspPI	GGATC	1 cut(s)	109
BspTNI	GGTCTC	2 cut(s)	139, 1513
BsrDI	GCAATG	1 cut(s)	1315
BsrFI	RCCGGY	2 cut(s)	49, 1301
BsrI	ACTGG	4 cut(s)	260, 719, 829, 1523
BssAI	RCCGGY	2 cut(s)	49, 1301
BssECI	CCNNGG	5 cut(s)	68, 115, 129, 374, 459
BssMI	GATC	3 cut(s)	101, 703, 1207
BssT1I	CCWWGG	1 cut(s)	459
Bst2UI	CCWGG	5 cut(s)	17, 117, 131, 229, 375
Bst4CI	ACNGT	7 cut(s)	367, 791, 1052, 1165, 1409, 1443, 1459
Bst6I	CTCTTC	1 cut(s)	296
BstC8I	GCNNGC	5 cut(s)	112, 408, 456, 504, 1319
BstDEI	CTNAG	7 cut(s)	9, 42, 186, 837, 930, 999, 1140
BstF5I	GGATG	6 cut(s)	652, 674, 970, 1096, 1270, 1477
BstFNI	CGCG	1 cut(s)	760
BstHHI	GCGC	1 cut(s)	1317
BstKTI	GATC	3 cut(s)	104, 706, 1210
BstMAI	GTCTC	2 cut(s)	139, 1513
BstMBI	GATC	3 cut(s)	101, 703, 1207
BstMCI	CGRYCG	1 cut(s)	50
BstMWI	GCNNNNNNNGC	6 cut(s)	43, 220, 229, 325, 403, 1314
BstNI	CCWGG	5 cut(s)	17, 117, 131, 229, 375
BstNSI	RCATGY	2 cut(s)	470, 1325
BstPAI	GACNNNNGTC	1 cut(s)	131
BstSCI	CCNGG	6 cut(s)	15, 115, 129, 227, 373, 389
BstSFI	CTRYAG	2 cut(s)	696, 1395
BstSLI	GKGCMC	1 cut(s)	1295
BstUI	CGCG	1 cut(s)	760
BstV1I	GCAGC	6 cut(s)	542, 1012, 1292, 1321, 1409, 1478
BstV2I	GAAGAC	2 cut(s)	975, 1062
BstX2I	RGATCY	1 cut(s)	101
BstXI	CCANNNNNNTGG	1 cut(s)	1462
BstYI	RGATCY	1 cut(s)	101
BstZI	CGGCCG	1 cut(s)	47
BsuRI	GGCC	7 cut(s)	49, 73, 86, 232, 328, 458, 647
BtsCI	GGATG	6 cut(s)	652, 674, 970, 1096, 1270, 1477
BtsI	GCAGTG	2 cut(s)	471, 754
BtsIMutI	CAGTG	5 cut(s)	471, 684, 754, 1057, 1464
BveI	ACCTGC	2 cut(s)	703, 727
Cac8I	GCNNGC	5 cut(s)	112, 408, 456, 504, 1319
CfoI	GCGC	1 cut(s)	1317
Cfr10I	RCCGGY	2 cut(s)	49, 1301
Cfr13I	GGNCC	3 cut(s)	85, 119, 177
Csp6I	GTAC	1 cut(s)	1526
CspCI	CAANNNNNGTGG	2 cut(s)	360, 395
CviAII	CATG	6 cut(s)	238, 467, 680, 860, 866, 1322
CviQI	GTAC	1 cut(s)	1526
DdeI	CTNAG	7 cut(s)	9, 42, 186, 837, 930, 999, 1140
DpnI	GATC	3 cut(s)	103, 705, 1209
DpnII	GATC	3 cut(s)	101, 703, 1207
EaeI	YGGCCR	1 cut(s)	47
EagI	CGGCCG	1 cut(s)	47
Eam1104I	CTCTTC	1 cut(s)	296
EarI	CTCTTC	1 cut(s)	296
EciI	GGCGGA	2 cut(s)	95, 114
EclXI	CGGCCG	1 cut(s)	47
Eco130I	CCWWGG	1 cut(s)	459
Eco147I	AGGCCT	4 cut(s)	73, 328, 458, 647
Eco24I	GRGCYC	2 cut(s)	386, 434
Eco31I	GGTCTC	2 cut(s)	139, 1513
Eco47I	GGWCC	2 cut(s)	119, 177
Eco52I	CGGCCG	1 cut(s)	47
Eco57I	CTGAAG	2 cut(s)	1008, 1517
EcoO109I	RGGNCCY	2 cut(s)	85, 177
EcoRII	CCWGG	5 cut(s)	15, 115, 129, 227, 373
EcoT14I	CCWWGG	1 cut(s)	459
EcoT38I	GRGCYC	2 cut(s)	386, 434
ErhI	CCWWGG	1 cut(s)	459
FaeI	CATG	6 cut(s)	241, 470, 683, 863, 869, 1325
FalI	AAGNNNNNCTT	2 cut(s)	1194, 1226
FaqI	GGGAC	1 cut(s)	353
FatI	CATG	6 cut(s)	237, 466, 679, 859, 865, 1321
FauI	CCCGC	1 cut(s)	403
FauNDI	CATATG	1 cut(s)	921
Fnu4HI	GCNGC	9 cut(s)	6, 47, 97, 531, 1026, 1306, 1335, 1398, 1467
FokI	GGATG	6 cut(s)	639, 661, 977, 1103, 1257, 1464
FriOI	GRGCYC	2 cut(s)	386, 434
Fsp4HI	GCNGC	9 cut(s)	6, 47, 97, 531, 1026, 1306, 1335, 1398, 1467
FspBI	CTAG	3 cut(s)	479, 1338, 1401
FspI	TGCGCA	1 cut(s)	1316
GlaI	GCGC	1 cut(s)	1316
GluI	GCNGC	9 cut(s)	6, 47, 97, 531, 1026, 1306, 1335, 1398, 1467
GsuI	CTGGAG	2 cut(s)	126, 219
HaeIII	GGCC	7 cut(s)	49, 73, 86, 232, 328, 458, 647
HapII	CCGG	3 cut(s)	50, 390, 1302
HhaI	GCGC	1 cut(s)	1317
Hin1II	CATG	6 cut(s)	241, 470, 683, 863, 869, 1325
Hin6I	GCGC	1 cut(s)	1315
HinP1I	GCGC	1 cut(s)	1315
HindIII	AAGCTT	3 cut(s)	139, 579, 938
HinfI	GANTC	8 cut(s)	20, 152, 164, 346, 542, 926, 971, 1264
HpaII	CCGG	3 cut(s)	50, 390, 1302
HphI	GGTGA	5 cut(s)	308, 355, 839, 1076, 1177
Hpy166II	GTNNAC	3 cut(s)	363, 953, 1293
Hpy188III	TCNNGA	3 cut(s)	105, 656, 1214
Hpy8I	GTNNAC	3 cut(s)	363, 953, 1293
HpyAV	CCTTC	7 cut(s)	84, 190, 266, 681, 954, 1079, 1110
HpyCH4III	ACNGT	7 cut(s)	367, 791, 1052, 1165, 1409, 1443, 1459
HpyCH4IV	ACGT	1 cut(s)	889
HpyF10VI	GCNNNNNNNGC	6 cut(s)	43, 220, 229, 325, 403, 1314
HpyF3I	CTNAG	7 cut(s)	9, 42, 186, 837, 930, 999, 1140
HpySE526I	ACGT	1 cut(s)	889
Hsp92II	CATG	6 cut(s)	241, 470, 683, 863, 869, 1325
HspAI	GCGC	1 cut(s)	1315
Kzo9I	GATC	3 cut(s)	101, 703, 1207
LmnI	GCTCC	4 cut(s)	107, 200, 538, 1033
Lsp1109I	GCAGC	6 cut(s)	542, 1012, 1292, 1321, 1409, 1478
LweI	GCATC	3 cut(s)	489, 1145, 1486
MaeI	CTAG	3 cut(s)	479, 1338, 1401
MaeII	ACGT	1 cut(s)	889
MaeIII	GTNAC	7 cut(s)	343, 469, 1038, 1046, 1165, 1223, 1340
MalI	GATC	3 cut(s)	103, 705, 1209
MboI	GATC	3 cut(s)	101, 703, 1207
MboII	GAAGA	9 cut(s)	136, 313, 510, 975, 1067, 1094, 1202, 1523, 1556
MflI	RGATCY	1 cut(s)	101
MhlI	GDGCHC	3 cut(s)	386, 434, 1295
MluCI	AATT	3 cut(s)	24, 334, 1499
MlyI	GAGTC	5 cut(s)	14, 146, 158, 340, 551
MmeI	TCCRAC	1 cut(s)	174
MseI	TTAA	4 cut(s)	315, 399, 741, 1488
MslI	CAYNNNNRTG	2 cut(s)	864, 1460
MspA1I	CMGCKG	2 cut(s)	46, 1537
MspI	CCGG	3 cut(s)	50, 390, 1302
MspR9I	CCNGG	6 cut(s)	17, 117, 131, 229, 375, 391
MvaI	CCWGG	5 cut(s)	17, 117, 131, 229, 375
MvnI	CGCG	1 cut(s)	760
MwoI	GCNNNNNNNGC	6 cut(s)	43, 220, 229, 325, 403, 1314
NciI	CCSGG	1 cut(s)	391
NdeI	CATATG	1 cut(s)	921
NdeII	GATC	3 cut(s)	101, 703, 1207
NlaIII	CATG	6 cut(s)	241, 470, 683, 863, 869, 1325
NlaIV	GGNNCC	1 cut(s)	109
NmeAIII	GCCGAG	1 cut(s)	1495
NmuCI	GTSAC	5 cut(s)	343, 469, 1046, 1165, 1340
NsbI	TGCGCA	1 cut(s)	1316
NspI	RCATGY	2 cut(s)	470, 1325
OliI	CACNNNNGTG	1 cut(s)	1460
PceI	AGGCCT	4 cut(s)	73, 328, 458, 647
PciI	ACATGT	1 cut(s)	466
PfeI	GAWTC	3 cut(s)	926, 971, 1264
PkrI	GCNGC	9 cut(s)	7, 48, 98, 532, 1027, 1307, 1336, 1399, 1468
PleI	GAGTC	5 cut(s)	14, 146, 158, 340, 550
PpsI	GAGTC	5 cut(s)	14, 146, 158, 340, 550
PpuMI	RGGWCCY	1 cut(s)	177
PscI	ACATGT	1 cut(s)	466
PshAI	GACNNNNGTC	1 cut(s)	131
PsiI	TTATAA	1 cut(s)	711
Psp5II	RGGWCCY	1 cut(s)	177
Psp6I	CCWGG	5 cut(s)	15, 115, 129, 227, 373
PspGI	CCWGG	5 cut(s)	15, 115, 129, 227, 373
PspN4I	GGNNCC	1 cut(s)	109
PspPI	GGNCC	3 cut(s)	85, 119, 177
PspPPI	RGGWCCY	1 cut(s)	177
PstI	CTGCAG	2 cut(s)	700, 1399
PsuI	RGATCY	1 cut(s)	101
PvuII	CAGCTG	1 cut(s)	1537
RsaI	GTAC	1 cut(s)	1527
RsaNI	GTAC	1 cut(s)	1526
RseI	CAYNNNNRTG	2 cut(s)	864, 1460
SaqAI	TTAA	4 cut(s)	315, 399, 741, 1488
SatI	GCNGC	9 cut(s)	6, 47, 97, 531, 1026, 1306, 1335, 1398, 1467
Sau3AI	GATC	3 cut(s)	101, 703, 1207
Sau96I	GGNCC	3 cut(s)	85, 119, 177
ScaI	AGTACT	1 cut(s)	1527
SchI	GAGTC	5 cut(s)	14, 146, 158, 340, 551
ScrFI	CCNGG	6 cut(s)	17, 117, 131, 229, 375, 391
SduI	GDGCHC	3 cut(s)	386, 434, 1295
SfaNI	GCATC	3 cut(s)	489, 1145, 1486
SfcI	CTRYAG	2 cut(s)	696, 1395
SinI	GGWCC	2 cut(s)	119, 177
SmiMI	CAYNNNNRTG	2 cut(s)	864, 1460
SmlI	CTYRAG	2 cut(s)	136, 1020
SmoI	CTYRAG	2 cut(s)	136, 1020
Sse9I	AATT	3 cut(s)	24, 334, 1499
SseBI	AGGCCT	4 cut(s)	73, 328, 458, 647
SsiI	CCGC	9 cut(s)	5, 35, 46, 80, 96, 99, 276, 410, 758
SspI	AATATT	1 cut(s)	1123
SspMI	CTAG	3 cut(s)	479, 1338, 1401
StuI	AGGCCT	4 cut(s)	73, 328, 458, 647
StyD4I	CCNGG	6 cut(s)	15, 115, 129, 227, 373, 389
StyI	CCWWGG	1 cut(s)	459
TaaI	ACNGT	7 cut(s)	367, 791, 1052, 1165, 1409, 1443, 1459
TaiI	ACGT	1 cut(s)	892
TaqI	TCGA	1 cut(s)	626
TasI	AATT	3 cut(s)	24, 334, 1499
TatI	WGTACW	1 cut(s)	1525
TauI	GCSGC	3 cut(s)	8, 49, 99
TfiI	GAWTC	3 cut(s)	926, 971, 1264
Tru1I	TTAA	4 cut(s)	315, 399, 741, 1488
Tru9I	TTAA	4 cut(s)	315, 399, 741, 1488
TscAI	CASTG	5 cut(s)	478, 691, 754, 1057, 1464
TseFI	GTSAC	5 cut(s)	343, 469, 1046, 1165, 1340
TseI	GCWGC	6 cut(s)	530, 1025, 1305, 1334, 1397, 1466
Tsp45I	GTSAC	5 cut(s)	343, 469, 1046, 1165, 1340
TspDTI	ATGAA	4 cut(s)	347, 591, 663, 1113
TspRI	CASTG	5 cut(s)	478, 691, 754, 1057, 1464
VneI	GTGCAC	1 cut(s)	1291
VpaK11BI	GGWCC	2 cut(s)	119, 177
XapI	RAATTY	2 cut(s)	334, 1499
XceI	RCATGY	2 cut(s)	470, 1325
XcmI	CCANNNNNNNNNTGG	1 cut(s)	260
XspI	CTAG	3 cut(s)	479, 1338, 1401
ZrmI	AGTACT	1 cut(s)	1527

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.