FvH4_6g50600

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
37635111 .. 37639105
3995 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g50600.t2

Sequence Viewer

Length: 1155 bp
ATGAAGGAGAAGAACGACACCGGCGGCGGAGGAGGCGGAGGTGCGTATGTGAGGGCGGACCAGATAGATCTGAAGAGCTTGGACGAGCAGCTGCAGAAGCATCTGGGCAGGGCTTGGACTATGGAGAAGAACAAGAACAGAGAAGAGCAAGAACAGGAACAAGAACGGGAAACAGAAGCAGCTAGGAGGGTGACGGTGGGGCCCACCAGGAGGCAGGAGTGGGAGATTGATCCTTCCAAGCTCACCGTCAAGGGAGCTATAGCCAGAGGCACTTTCGGCACCGTCCACCGCGGCATTTACGACGGCTTAGACGTCGCCGTTAAACTTCTGGATTGGGGAGAAGAGGGCCATAGATCTGATGCTGAAATAGCTTCTCTAAGAGCAGCTTTTACTCAAGAAGTTGCTGTCTGGCATAAGCTTGATCATCCTAATGTAACCAAGTTTATAGGAGCGACAATGGGAACATCAGAGCTCAACATACAAACAGACAATGGCCAGGTTGGCATGCCAAGTAATGTTTGTTGTGTTGTTGTCGAGTATTGTCCTGGTGGTGCACTGAAATCTTACCTCATAAAGAACCGCAGAAAGAAGTTGGCTTTCAAAGTAGTTGTCCAACTGGCACTAGATCTTGCACGAGGTTTAGGCTATCTTCATTCACAGAAGATTGTTCACAGAGATGTTAAAACAGAAAACATGCTTCTGGACAAGACACGTACTGTGAAAATAGCTGACTTTGGGGTTGCTCGTGTGGAGGCCTCAAATCCTAATGACATGACAGGCGAGACTGGAACCCTTGGTTACATGGCTCCTGAGGTTCTCAATGGCAACCCATATAATAGGAAATGCGATGTGTACAGTTTTGGCATATGCTTGTGGGAAATATACTGCTGCGACATGCCGTATCCTGATCTTAGTTTCTCGGAGGTGACATCAGCTGTTGTCCGCCAGAATCTGAGGCCCGAGATACCTCGTTGTTGCCCAAGCGCTCTTGCGAATGTTATGAAGCGATGTTGGGATGCTAACCCTGACAAGCGGCCCGAGATGGATGAGGTGGTAGTAATGTTGGAGGCAGTCGACACAACTAAAGGTGGAGGTATGCTCCCTCATGATCATCCTCAGGGTTGTCTCTGCTTCCGCAGGTACCGAGGACCCTGA

Protein Analysis

385

Amino Acids

42.8

Weight (kDa)

6.76

Isoelectric Point (pI)

36.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 82 - 214 2.5e-13 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 83 - 214 2.3e-07 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011710)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 315
Acc36I ACCTGC 1 cut(s) 1128
Acc65I GGTACC 1 cut(s) 1140
AccB1I GGYRCC 2 cut(s) 278, 1140
AccI GTMKAC 1 cut(s) 1074
AccII CGCG 1 cut(s) 291
AclWI GGATC 1 cut(s) 224
AcoI YGGCCR 1 cut(s) 493
AcuI CTGAAG 1 cut(s) 92
AcyI GRCGYC 1 cut(s) 312
AfaI GTAC 3 cut(s) 715, 854, 1142
AfeI AGCGCT 1 cut(s) 985
AfiI CCNNNNNNNGG 1 cut(s) 210
AflIII ACRYGT 1 cut(s) 710
AgsI TTSAA 1 cut(s) 601
AjnI CCWGG 3 cut(s) 206, 495, 544
Alw21I GWGCWC 2 cut(s) 474, 556
Alw26I GTCTC 2 cut(s) 776, 1130
Alw44I GTGCAC 1 cut(s) 552
AlwI GGATC 1 cut(s) 224
AlwNI CAGNNNCTG 1 cut(s) 952
Ama87I CYCGRG 2 cut(s) 959, 1037
Aor51HI AGCGCT 1 cut(s) 985
AoxI GGCC 6 cut(s) 200, 346, 493, 753, 956, 1034
ApaI GGGCCC 1 cut(s) 204
ApaLI GTGCAC 1 cut(s) 552
ApeKI GCWGC 5 cut(s) 88, 91, 179, 383, 888
ArsI GACNNNNNNTTYG 2 cut(s) 594, 626
Asp718I GGTACC 1 cut(s) 1140
AspLEI GCGC 1 cut(s) 986
AspS9I GGNCC 7 cut(s) 58, 200, 201, 346, 957, 1035, 1148
AsuHPI GGTGA 3 cut(s) 202, 235, 937
AvaI CYCGRG 2 cut(s) 959, 1037
AvaII GGWCC 2 cut(s) 58, 1148
AxyI CCTNAGG 2 cut(s) 810, 1116
BaeGI GKGCMC 2 cut(s) 204, 556
BalI TGGCCA 1 cut(s) 495
BanI GGYRCC 2 cut(s) 278, 1140
BanII GRGCYC 2 cut(s) 204, 474
BauI CACGAG 2 cut(s) 633, 744
Bbv12I GWGCWC 2 cut(s) 474, 556
BbvI GCAGC 5 cut(s) 78, 100, 191, 395, 875
BccI CCATC 1 cut(s) 1036
BceAI ACGGC 3 cut(s) 302, 319, 883
BciT130I CCWGG 3 cut(s) 208, 497, 546
BciVI GTATCC 1 cut(s) 912
BclI TGATCA 2 cut(s) 421, 1108
BcoDI GTCTC 2 cut(s) 776, 1130
BfaI CTAG 2 cut(s) 183, 623
BfmI CTRYAG 2 cut(s) 92, 258
BfoI RGCGCY 1 cut(s) 987
BfuAI ACCTGC 1 cut(s) 1128
BfuI GTATCC 1 cut(s) 912
BglI GCCNNNNNGGC 1 cut(s) 501
BglII AGATCT 3 cut(s) 67, 353, 625
BisI GCNGC 8 cut(s) 25, 89, 92, 180, 292, 384, 889, 1034
BlsI GCNGC 8 cut(s) 26, 90, 93, 181, 293, 385, 890, 1035
Bme1390I CCNGG 3 cut(s) 208, 497, 546
Bme18I GGWCC 2 cut(s) 58, 1148
BmeT110I CYCGRG 2 cut(s) 959, 1037
BmgT120I GGNCC 7 cut(s) 58, 200, 201, 346, 957, 1035, 1148
BmiI GGNNCC 7 cut(s) 201, 202, 280, 790, 807, 1142, 1150
BmrFI CCNGG 3 cut(s) 208, 497, 546
BmsI GCATC 3 cut(s) 109, 349, 1006
BplI GAGNNNNNCTC 2 cut(s) 1083, 1115
BpuEI CTTGAG 1 cut(s) 378
BsaAI YACGTR 1 cut(s) 713
BsaHI GRCGYC 1 cut(s) 312
BsaJI CCNNGG 3 cut(s) 289, 793, 1144
Bsc4I CCNNNNNNNGG 1 cut(s) 210
Bse118I RCCGGY 1 cut(s) 20
Bse1I ACTGG 2 cut(s) 621, 790
Bse21I CCTNAGG 2 cut(s) 810, 1116
BseBI CCWGG 3 cut(s) 208, 497, 546
BseDI CCNNGG 3 cut(s) 289, 793, 1144
BseGI GGATG 4 cut(s) 424, 1021, 1051, 1111
BseLI CCNNNNNNNGG 1 cut(s) 210
BseMII CTCAG 3 cut(s) 801, 944, 1130
BseNI ACTGG 2 cut(s) 621, 790
BseRI GAGGAG 1 cut(s) 45
BseSI GKGCMC 2 cut(s) 204, 556
BseXI GCAGC 5 cut(s) 78, 100, 191, 395, 875
Bsh1236I CGCG 1 cut(s) 291
BshFI GGCC 6 cut(s) 202, 348, 495, 755, 958, 1036
BshNI GGYRCC 2 cut(s) 278, 1140
BsiHKAI GWGCWC 2 cut(s) 474, 556
BsiHKCI CYCGRG 2 cut(s) 959, 1037
BsiSI CCGG 1 cut(s) 21
BslI CCNNNNNNNGG 1 cut(s) 210
BsmAI GTCTC 2 cut(s) 776, 1130
BsnI GGCC 6 cut(s) 202, 348, 495, 755, 958, 1036
BsoBI CYCGRG 2 cut(s) 959, 1037
Bsp120I GGGCCC 1 cut(s) 200
Bsp1286I GDGCHC 3 cut(s) 204, 474, 556
Bsp1407I TGTACA 1 cut(s) 852
Bsp143I GATC 7 cut(s) 67, 229, 353, 421, 625, 907, 1108
BspANI GGCC 6 cut(s) 202, 348, 495, 755, 958, 1036
BspCNI CTCAG 3 cut(s) 802, 945, 1129
BspFNI CGCG 1 cut(s) 291
BspHI TCATGA 1 cut(s) 1105
BspLI GGNNCC 7 cut(s) 201, 202, 280, 790, 807, 1142, 1150
BspMAI CTGCAG 1 cut(s) 96
BspMI ACCTGC 1 cut(s) 1128
BspPI GGATC 1 cut(s) 224
BspQI GCTCTTC 2 cut(s) 68, 138
BspT107I GGYRCC 2 cut(s) 278, 1140
BsrFI RCCGGY 1 cut(s) 20
BsrGI TGTACA 1 cut(s) 852
BsrI ACTGG 2 cut(s) 621, 790
BssAI RCCGGY 1 cut(s) 20
BssECI CCNNGG 3 cut(s) 289, 793, 1144
BssMI GATC 7 cut(s) 67, 229, 353, 421, 625, 907, 1108
BssNI GRCGYC 1 cut(s) 312
BssSI CACGAG 2 cut(s) 633, 744
BssT1I CCWWGG 1 cut(s) 793
Bst2BI CACGAG 2 cut(s) 633, 744
Bst2UI CCWGG 3 cut(s) 208, 497, 546
Bst4CI ACNGT 5 cut(s) 196, 247, 283, 718, 857
Bst6I CTCTTC 3 cut(s) 68, 138, 336
BstACI GRCGYC 1 cut(s) 312
BstAUI TGTACA 1 cut(s) 852
BstBAI YACGTR 1 cut(s) 713
BstC8I GCNNGC 1 cut(s) 506
BstDEI CTNAG 6 cut(s) 307, 377, 810, 911, 953, 1116
BstDSI CCRYGG 1 cut(s) 289
BstF5I GGATG 4 cut(s) 424, 1021, 1051, 1111
BstFNI CGCG 1 cut(s) 291
BstH2I RGCGCY 1 cut(s) 987
BstHHI GCGC 1 cut(s) 986
BstKTI GATC 7 cut(s) 70, 232, 356, 424, 628, 910, 1111
BstMAI GTCTC 2 cut(s) 776, 1130
BstMBI GATC 7 cut(s) 67, 229, 353, 421, 625, 907, 1108
BstMWI GCNNNNNNNGC 5 cut(s) 33, 97, 276, 368, 501
BstNI CCWGG 3 cut(s) 208, 497, 546
BstNSI RCATGY 3 cut(s) 508, 697, 898
BstSCI CCNGG 3 cut(s) 206, 495, 544
BstSFI CTRYAG 2 cut(s) 92, 258
BstSLI GKGCMC 2 cut(s) 204, 556
BstUI CGCG 1 cut(s) 291
BstV1I GCAGC 5 cut(s) 78, 100, 191, 395, 875
BstX2I RGATCY 3 cut(s) 67, 353, 625
BstYI RGATCY 3 cut(s) 67, 353, 625
Bsu36I CCTNAGG 2 cut(s) 810, 1116
BsuI GTATCC 1 cut(s) 912
BsuRI GGCC 6 cut(s) 202, 348, 495, 755, 958, 1036
BtgI CCRYGG 1 cut(s) 289
BtgZI GCGATG 2 cut(s) 861, 1021
BtsCI GGATG 4 cut(s) 424, 1021, 1051, 1111
BtsIMutI CAGTG 1 cut(s) 554
BveI ACCTGC 1 cut(s) 1128
Cac8I GCNNGC 1 cut(s) 506
CaiI CAGNNNCTG 1 cut(s) 952
CciI TCATGA 1 cut(s) 1105
CfoI GCGC 1 cut(s) 986
Cfr10I RCCGGY 1 cut(s) 20
Cfr13I GGNCC 7 cut(s) 58, 200, 201, 346, 957, 1035, 1148
Cfr42I CCGCGG 1 cut(s) 292
Csp6I GTAC 3 cut(s) 714, 853, 1141
CviAII CATG 6 cut(s) 505, 694, 772, 802, 895, 1106
CviQI GTAC 3 cut(s) 714, 853, 1141
DdeI CTNAG 6 cut(s) 307, 377, 810, 911, 953, 1116
DpnI GATC 7 cut(s) 69, 231, 355, 423, 627, 909, 1110
DpnII GATC 7 cut(s) 67, 229, 353, 421, 625, 907, 1108
EaeI YGGCCR 1 cut(s) 493
Eam1104I CTCTTC 3 cut(s) 68, 138, 336
EarI CTCTTC 3 cut(s) 68, 138, 336
EciI GGCGGA 4 cut(s) 42, 51, 71, 932
Ecl136II GAGCTC 1 cut(s) 472
Eco130I CCWWGG 1 cut(s) 793
Eco147I AGGCCT 1 cut(s) 755
Eco24I GRGCYC 2 cut(s) 204, 474
Eco47I GGWCC 2 cut(s) 58, 1148
Eco47III AGCGCT 1 cut(s) 985
Eco53kI GAGCTC 1 cut(s) 472
Eco57I CTGAAG 1 cut(s) 92
Eco81I CCTNAGG 2 cut(s) 810, 1116
Eco88I CYCGRG 2 cut(s) 959, 1037
EcoICRI GAGCTC 1 cut(s) 472
EcoO109I RGGNCCY 2 cut(s) 200, 1148
EcoRII CCWGG 3 cut(s) 206, 495, 544
EcoT14I CCWWGG 1 cut(s) 793
EcoT38I GRGCYC 2 cut(s) 204, 474
ErhI CCWWGG 1 cut(s) 793
FaeI CATG 6 cut(s) 508, 697, 775, 805, 898, 1109
FalI AAGNNNNNCTT 2 cut(s) 370, 402
FatI CATG 6 cut(s) 504, 693, 771, 801, 894, 1105
FauNDI CATATG 1 cut(s) 866
FbaI TGATCA 2 cut(s) 421, 1108
FblI GTMKAC 1 cut(s) 1074
Fnu4HI GCNGC 8 cut(s) 25, 89, 92, 180, 292, 384, 889, 1034
FokI GGATG 4 cut(s) 411, 1028, 1058, 1098
FriOI GRGCYC 2 cut(s) 204, 474
Fsp4HI GCNGC 8 cut(s) 25, 89, 92, 180, 292, 384, 889, 1034
FspBI CTAG 2 cut(s) 183, 623
GlaI GCGC 1 cut(s) 985
GluI GCNGC 8 cut(s) 25, 89, 92, 180, 292, 384, 889, 1034
HaeII RGCGCY 1 cut(s) 987
HaeIII GGCC 6 cut(s) 202, 348, 495, 755, 958, 1036
HapII CCGG 1 cut(s) 21
HhaI GCGC 1 cut(s) 986
Hin1I GRCGYC 1 cut(s) 312
Hin1II CATG 6 cut(s) 508, 697, 775, 805, 898, 1109
Hin6I GCGC 1 cut(s) 984
HinP1I GCGC 1 cut(s) 984
HincII GTYRAC 1 cut(s) 1075
HindII GTYRAC 1 cut(s) 1075
HindIII AAGCTT 1 cut(s) 416
HinfI GANTC 1 cut(s) 949
HpaII CCGG 1 cut(s) 21
HphI GGTGA 3 cut(s) 202, 235, 937
Hpy166II GTNNAC 5 cut(s) 286, 554, 670, 853, 1075
Hpy188I TCNGA 5 cut(s) 72, 358, 469, 922, 954
Hpy188III TCNNGA 6 cut(s) 329, 395, 701, 809, 905, 1106
Hpy8I GTNNAC 5 cut(s) 286, 554, 670, 853, 1075
Hpy99I CGWCG 2 cut(s) 305, 317
HpyAV CCTTC 1 cut(s) 243
HpyCH4III ACNGT 5 cut(s) 196, 247, 283, 718, 857
HpyCH4IV ACGT 2 cut(s) 312, 712
HpyCH4V TGCA 3 cut(s) 94, 554, 632
HpyF10VI GCNNNNNNNGC 5 cut(s) 33, 97, 276, 368, 501
HpyF3I CTNAG 6 cut(s) 307, 377, 810, 911, 953, 1116
HpySE526I ACGT 2 cut(s) 312, 712
Hsp92I GRCGYC 1 cut(s) 312
Hsp92II CATG 6 cut(s) 508, 697, 775, 805, 898, 1109
HspAI GCGC 1 cut(s) 984
KpnI GGTACC 1 cut(s) 1144
Ksp22I TGATCA 2 cut(s) 421, 1108
KspI CCGCGG 1 cut(s) 292
Kzo9I GATC 7 cut(s) 67, 229, 353, 421, 625, 907, 1108
LguI GCTCTTC 2 cut(s) 68, 138
LmnI GCTCC 4 cut(s) 254, 449, 811, 1104
Lsp1109I GCAGC 5 cut(s) 78, 100, 191, 395, 875
LweI GCATC 3 cut(s) 109, 349, 1006
MaeI CTAG 2 cut(s) 183, 623
MaeII ACGT 2 cut(s) 312, 712
MaeIII GTNAC 4 cut(s) 190, 433, 797, 925
MalI GATC 7 cut(s) 69, 231, 355, 423, 627, 909, 1110
MboI GATC 7 cut(s) 67, 229, 353, 421, 625, 907, 1108
MboII GAAGA 7 cut(s) 22, 85, 139, 155, 353, 641, 673
MflI RGATCY 3 cut(s) 67, 353, 625
MhlI GDGCHC 3 cut(s) 204, 474, 556
MlsI TGGCCA 1 cut(s) 495
MluNI TGGCCA 1 cut(s) 495
MmeI TCCRAC 2 cut(s) 637, 1044
Mox20I TGGCCA 1 cut(s) 495
MscI TGGCCA 1 cut(s) 495
MseI TTAA 2 cut(s) 321, 681
MslI CAYNNNNRTG 2 cut(s) 429, 675
Msp20I TGGCCA 1 cut(s) 495
MspA1I CMGCKG 3 cut(s) 91, 291, 935
MspI CCGG 1 cut(s) 21
MspR9I CCNGG 3 cut(s) 208, 497, 546
MvaI CCWGG 3 cut(s) 208, 497, 546
MvnI CGCG 1 cut(s) 291
MwoI GCNNNNNNNGC 5 cut(s) 33, 97, 276, 368, 501
NdeI CATATG 1 cut(s) 866
NdeII GATC 7 cut(s) 67, 229, 353, 421, 625, 907, 1108
NlaIII CATG 6 cut(s) 508, 697, 775, 805, 898, 1109
NlaIV GGNNCC 7 cut(s) 201, 202, 280, 790, 807, 1142, 1150
NmuCI GTSAC 2 cut(s) 190, 925
NspI RCATGY 3 cut(s) 508, 697, 898
PaeI GCATGC 1 cut(s) 508
PagI TCATGA 1 cut(s) 1105
PceI AGGCCT 1 cut(s) 755
PciSI GCTCTTC 2 cut(s) 68, 138
PcsI WCGNNNNNNNCGW 1 cut(s) 309
PfeI GAWTC 1 cut(s) 949
PkrI GCNGC 8 cut(s) 26, 90, 93, 181, 293, 385, 890, 1035
Ppu21I YACGTR 1 cut(s) 713
PpuMI RGGWCCY 1 cut(s) 1148
Psp124BI GAGCTC 1 cut(s) 474
Psp5II RGGWCCY 1 cut(s) 1148
Psp6I CCWGG 3 cut(s) 206, 495, 544
PspGI CCWGG 3 cut(s) 206, 495, 544
PspN4I GGNNCC 7 cut(s) 201, 202, 280, 790, 807, 1142, 1150
PspOMI GGGCCC 1 cut(s) 200
PspPI GGNCC 7 cut(s) 58, 200, 201, 346, 957, 1035, 1148
PspPPI RGGWCCY 1 cut(s) 1148
PstI CTGCAG 1 cut(s) 96
PstNI CAGNNNCTG 1 cut(s) 952
PsuI RGATCY 3 cut(s) 67, 353, 625
PvuII CAGCTG 2 cut(s) 91, 935
RsaI GTAC 3 cut(s) 715, 854, 1142
RsaNI GTAC 3 cut(s) 714, 853, 1141
RseI CAYNNNNRTG 2 cut(s) 429, 675
SacI GAGCTC 1 cut(s) 474
SacII CCGCGG 1 cut(s) 292
SalI GTCGAC 1 cut(s) 1073
SapI GCTCTTC 2 cut(s) 68, 138
SaqAI TTAA 2 cut(s) 321, 681
SatI GCNGC 8 cut(s) 25, 89, 92, 180, 292, 384, 889, 1034
Sau3AI GATC 7 cut(s) 67, 229, 353, 421, 625, 907, 1108
Sau96I GGNCC 7 cut(s) 58, 200, 201, 346, 957, 1035, 1148
ScrFI CCNGG 3 cut(s) 208, 497, 546
SduI GDGCHC 3 cut(s) 204, 474, 556
SfaNI GCATC 3 cut(s) 109, 349, 1006
SfcI CTRYAG 2 cut(s) 92, 258
Sfr303I CCGCGG 1 cut(s) 292
SgrAI CRCCGGYG 1 cut(s) 20
SgrBI CCGCGG 1 cut(s) 292
SinI GGWCC 2 cut(s) 58, 1148
SmiMI CAYNNNNRTG 2 cut(s) 429, 675
SmlI CTYRAG 1 cut(s) 393
SmoI CTYRAG 1 cut(s) 393
SphI GCATGC 1 cut(s) 508
SseBI AGGCCT 1 cut(s) 755
SspMI CTAG 2 cut(s) 183, 623
SstI GAGCTC 1 cut(s) 474
StuI AGGCCT 1 cut(s) 755
StyD4I CCNGG 3 cut(s) 206, 495, 544
StyI CCWWGG 1 cut(s) 793
TaaI ACNGT 5 cut(s) 196, 247, 283, 718, 857
TaiI ACGT 2 cut(s) 315, 715
TaqI TCGA 2 cut(s) 534, 1074
TatI WGTACW 1 cut(s) 852
TauI GCSGC 3 cut(s) 27, 294, 1036
TfiI GAWTC 1 cut(s) 949
Tru1I TTAA 2 cut(s) 321, 681
Tru9I TTAA 2 cut(s) 321, 681
TscAI CASTG 1 cut(s) 561
TseFI GTSAC 2 cut(s) 190, 925
TseI GCWGC 5 cut(s) 88, 91, 179, 383, 888
Tsp45I GTSAC 2 cut(s) 190, 925
TspDTI ATGAA 3 cut(s) 17, 641, 1016
TspRI CASTG 1 cut(s) 561
VneI GTGCAC 1 cut(s) 552
VpaK11BI GGWCC 2 cut(s) 58, 1148
XceI RCATGY 3 cut(s) 508, 697, 898
XmiI GTMKAC 1 cut(s) 1074
XspI CTAG 2 cut(s) 183, 623
ZraI GACGTC 1 cut(s) 313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.