RLG00000022009

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
79955461 .. 79958895
3435 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022009

Sequence Viewer

Length: 1146 bp
ATGAAGGAGAAGAACGACACCGGCGGCGGCGGTGCGTATGTGAGGGCGGACCAAATAGATCTGAAGAGCTTGGACGAGCAGCTTCAGAAGCATCTGAGCAGGGCATGGACTATGGAGAAGAACAAGAACAGAGACCAGCAGGAGCAACAAGAACAAGAAGAGGAAGCGGAAGCAGCAGCTAGGGTGGTGGGGCCCACCAGGAGGCAAGAGTGGGAGATTGATCCTTCCAAGCTCATAGTCAAGGGTGCTATTGCCAGAGGAACCTTCGGCACCGTCCACCGTGGCATTTACGACGGCATAGACGTCGCCGTTAAACTTCTAGATTGGGGAGAAGAGGGCCATAGAACTGACGCTGAAATAGCTTCTCTAAGAGCAGCTTTTACTCAAGAAGTTGCTGTGTGGCATAAGCTTGACCATCCTAATGTAACCAAGTTTATAGGGGCGACAATGGGAACATCAGAGCTGAACATACAAACAGATAATGGCCAGGTTGGCATGCCAAGTAATGTTTGTTGCGTTGTTGTCGAGTATTGTCCTGGTGGTGCACTGAAATCTTACCTCATAAAGAACCGCAGAAAGAAGCTGGCTTTCAAAGTAGTTGTCCAATTGGCACTAGATCTTGCACGAGGTTTATGCTATCTCCATTCACAGAAGATTGTTCACAGAGATGTTAAAACAGAAAACATGCTTCTGGACAAGACACGTACTGTAAAAATAGCTGACTTTGGGGTTGCTCGTGTGGAGGCCTCAAATCCTCATGACATGACAGGGGAGACTGGAACCCTTGGTTACATGGCTCCAGAGGTTCTCAACGGCAATCCATATAACAGGAAATGTGATGTGTACAGTTTTGGCATATGCTTGTGGGAAATATACTGCTGTGACATGCCGTATCCTGATCTTAGTTTCTCAGAGGTGACTTCTGCTGTTGTCCGTCAGAATCTGAGGCCCGAGATACCTCGTTGTTGCCCAAGTTCTCTTGCAAATGTTATGAAGCGATGTTGGGATGCTAACCCCGATAAGCGGCCCGAGATGGATGAGGTGGTGGCCATGTTGGAGGCTGTCGACACAACTAAAGGCGGAGGTATGCTCCCTCATGATCATCCTCAGGGTTGTCTCTGCTTCCGTAGGTATCGAGGACCTTGA

Protein Analysis

382

Amino Acids

42.61

Weight (kDa)

6.39

Isoelectric Point (pI)

35.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 81 - 350 2.8e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 82 - 352 9.5e-62 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 189 - 298 4.7e-06 Kinase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011710)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 306
AccB1I GGYRCC 1 cut(s) 269
AccI GTMKAC 1 cut(s) 1065
AciI CCGC 8 cut(s) 24, 27, 30, 47, 167, 571, 1024, 1080
AclWI GGATC 1 cut(s) 215
AcoI YGGCCR 2 cut(s) 484, 1047
AcuI CTGAAG 2 cut(s) 68, 83
AcyI GRCGYC 1 cut(s) 303
AfaI GTAC 2 cut(s) 706, 845
AfiI CCNNNNNNNGG 2 cut(s) 201, 1023
AflIII ACRYGT 1 cut(s) 701
AgsI TTSAA 1 cut(s) 592
AjnI CCWGG 3 cut(s) 197, 486, 535
Alw21I GWGCWC 1 cut(s) 547
Alw26I GTCTC 3 cut(s) 126, 767, 1121
Alw44I GTGCAC 1 cut(s) 543
AlwI GGATC 1 cut(s) 215
AlwNI CAGNNNCTG 1 cut(s) 943
Ama87I CYCGRG 2 cut(s) 950, 1028
AoxI GGCC 7 cut(s) 191, 337, 484, 744, 947, 1025, 1047
ApaI GGGCCC 1 cut(s) 195
ApaLI GTGCAC 1 cut(s) 543
ApeKI GCWGC 4 cut(s) 79, 173, 176, 374
ArsI GACNNNNNNTTYG 2 cut(s) 585, 617
AspS9I GGNCC 7 cut(s) 49, 191, 192, 337, 948, 1026, 1139
AsuHPI GGTGA 1 cut(s) 928
AvaI CYCGRG 2 cut(s) 950, 1028
AvaII GGWCC 2 cut(s) 49, 1139
AxyI CCTNAGG 1 cut(s) 1107
BaeGI GKGCMC 2 cut(s) 195, 547
BalI TGGCCA 2 cut(s) 486, 1049
BanI GGYRCC 1 cut(s) 269
BanII GRGCYC 1 cut(s) 195
BauI CACGAG 2 cut(s) 624, 735
Bbv12I GWGCWC 1 cut(s) 547
BbvI GCAGC 4 cut(s) 91, 185, 188, 386
BccI CCATC 2 cut(s) 423, 1027
BceAI ACGGC 4 cut(s) 293, 310, 829, 874
BcgI CGANNNNNNTGC 4 cut(s) 286, 320, 615, 649
BciT130I CCWGG 3 cut(s) 199, 488, 537
BciVI GTATCC 1 cut(s) 903
BclI TGATCA 1 cut(s) 1099
BcoDI GTCTC 3 cut(s) 126, 767, 1121
BfaI CTAG 3 cut(s) 180, 320, 614
BfuI GTATCC 1 cut(s) 903
BglI GCCNNNNNGGC 1 cut(s) 492
BglII AGATCT 2 cut(s) 58, 616
BisI GCNGC 7 cut(s) 25, 28, 80, 174, 177, 375, 1025
BlsI GCNGC 7 cut(s) 26, 29, 81, 175, 178, 376, 1026
Bme1390I CCNGG 3 cut(s) 199, 488, 537
Bme18I GGWCC 2 cut(s) 49, 1139
BmeT110I CYCGRG 2 cut(s) 950, 1028
BmgT120I GGNCC 7 cut(s) 49, 191, 192, 337, 948, 1026, 1139
BmiI GGNNCC 6 cut(s) 192, 193, 262, 271, 781, 798
BmrFI CCNGG 3 cut(s) 199, 488, 537
BmsI GCATC 2 cut(s) 100, 997
BplI GAGNNNNNCTC 2 cut(s) 1074, 1106
BpmI CTGGAG 1 cut(s) 783
BpuEI CTTGAG 1 cut(s) 369
BsaAI YACGTR 1 cut(s) 704
BsaHI GRCGYC 1 cut(s) 303
BsaI GGTCTC 1 cut(s) 126
BsaJI CCNNGG 2 cut(s) 280, 784
Bsc4I CCNNNNNNNGG 2 cut(s) 201, 1023
Bse118I RCCGGY 1 cut(s) 20
Bse1I ACTGG 1 cut(s) 781
Bse21I CCTNAGG 1 cut(s) 1107
BseBI CCWGG 3 cut(s) 199, 488, 537
BseDI CCNNGG 2 cut(s) 280, 784
BseGI GGATG 4 cut(s) 415, 1012, 1042, 1102
BseLI CCNNNNNNNGG 2 cut(s) 201, 1023
BseMII CTCAG 4 cut(s) 86, 924, 935, 1121
BseNI ACTGG 1 cut(s) 781
BseSI GKGCMC 2 cut(s) 195, 547
BseXI GCAGC 4 cut(s) 91, 185, 188, 386
BshFI GGCC 7 cut(s) 193, 339, 486, 746, 949, 1027, 1049
BshNI GGYRCC 1 cut(s) 269
BsiHKAI GWGCWC 1 cut(s) 547
BsiHKCI CYCGRG 2 cut(s) 950, 1028
BsiSI CCGG 1 cut(s) 21
BslI CCNNNNNNNGG 2 cut(s) 201, 1023
BsmAI GTCTC 3 cut(s) 126, 767, 1121
BsnI GGCC 7 cut(s) 193, 339, 486, 746, 949, 1027, 1049
Bso31I GGTCTC 1 cut(s) 126
BsoBI CYCGRG 2 cut(s) 950, 1028
Bsp120I GGGCCC 1 cut(s) 191
Bsp1286I GDGCHC 2 cut(s) 195, 547
Bsp1407I TGTACA 1 cut(s) 843
Bsp143I GATC 5 cut(s) 58, 220, 616, 898, 1099
BspACI CCGC 8 cut(s) 24, 27, 30, 47, 167, 571, 1024, 1080
BspANI GGCC 7 cut(s) 193, 339, 486, 746, 949, 1027, 1049
BspCNI CTCAG 4 cut(s) 87, 923, 936, 1120
BspHI TCATGA 2 cut(s) 757, 1096
BspLI GGNNCC 6 cut(s) 192, 193, 262, 271, 781, 798
BspPI GGATC 1 cut(s) 215
BspQI GCTCTTC 1 cut(s) 59
BspT107I GGYRCC 1 cut(s) 269
BspTNI GGTCTC 1 cut(s) 126
BsrFI RCCGGY 1 cut(s) 20
BsrGI TGTACA 1 cut(s) 843
BsrI ACTGG 1 cut(s) 781
BssAI RCCGGY 1 cut(s) 20
BssECI CCNNGG 2 cut(s) 280, 784
BssMI GATC 5 cut(s) 58, 220, 616, 898, 1099
BssNI GRCGYC 1 cut(s) 303
BssSI CACGAG 2 cut(s) 624, 735
BssT1I CCWWGG 1 cut(s) 784
Bst2BI CACGAG 2 cut(s) 624, 735
Bst2UI CCWGG 3 cut(s) 199, 488, 537
Bst4CI ACNGT 4 cut(s) 274, 281, 709, 848
Bst6I CTCTTC 3 cut(s) 59, 153, 327
BstACI GRCGYC 1 cut(s) 303
BstAUI TGTACA 1 cut(s) 843
BstBAI YACGTR 1 cut(s) 704
BstC8I GCNNGC 2 cut(s) 497, 585
BstDEI CTNAG 6 cut(s) 95, 368, 902, 910, 944, 1107
BstDSI CCRYGG 1 cut(s) 280
BstF5I GGATG 4 cut(s) 415, 1012, 1042, 1102
BstKTI GATC 5 cut(s) 61, 223, 619, 901, 1102
BstMAI GTCTC 3 cut(s) 126, 767, 1121
BstMBI GATC 5 cut(s) 58, 220, 616, 898, 1099
BstMWI GCNNNNNNNGC 4 cut(s) 88, 173, 359, 492
BstNI CCWGG 3 cut(s) 199, 488, 537
BstNSI RCATGY 3 cut(s) 499, 688, 889
BstSCI CCNGG 3 cut(s) 197, 486, 535
BstSLI GKGCMC 2 cut(s) 195, 547
BstV1I GCAGC 4 cut(s) 91, 185, 188, 386
BstX2I RGATCY 2 cut(s) 58, 616
BstYI RGATCY 2 cut(s) 58, 616
Bsu36I CCTNAGG 1 cut(s) 1107
BsuI GTATCC 1 cut(s) 903
BsuRI GGCC 7 cut(s) 193, 339, 486, 746, 949, 1027, 1049
BtgI CCRYGG 1 cut(s) 280
BtgZI GCGATG 1 cut(s) 1012
BtsCI GGATG 4 cut(s) 415, 1012, 1042, 1102
BtsIMutI CAGTG 1 cut(s) 545
Cac8I GCNNGC 2 cut(s) 497, 585
CaiI CAGNNNCTG 1 cut(s) 943
CciI TCATGA 2 cut(s) 757, 1096
Cfr10I RCCGGY 1 cut(s) 20
Cfr13I GGNCC 7 cut(s) 49, 191, 192, 337, 948, 1026, 1139
CseI GACGC 1 cut(s) 359
Csp6I GTAC 2 cut(s) 705, 844
CviAII CATG 9 cut(s) 105, 496, 685, 758, 763, 793, 886, 1051, 1097
CviQI GTAC 2 cut(s) 705, 844
DdeI CTNAG 6 cut(s) 95, 368, 902, 910, 944, 1107
DpnI GATC 5 cut(s) 60, 222, 618, 900, 1101
DpnII GATC 5 cut(s) 58, 220, 616, 898, 1099
EaeI YGGCCR 2 cut(s) 484, 1047
Eam1104I CTCTTC 3 cut(s) 59, 153, 327
EarI CTCTTC 3 cut(s) 59, 153, 327
EciI GGCGGA 2 cut(s) 62, 1095
Eco130I CCWWGG 1 cut(s) 784
Eco147I AGGCCT 1 cut(s) 746
Eco24I GRGCYC 1 cut(s) 195
Eco31I GGTCTC 1 cut(s) 126
Eco47I GGWCC 2 cut(s) 49, 1139
Eco57I CTGAAG 2 cut(s) 68, 83
Eco81I CCTNAGG 1 cut(s) 1107
Eco88I CYCGRG 2 cut(s) 950, 1028
EcoO109I RGGNCCY 2 cut(s) 191, 1139
EcoRII CCWGG 3 cut(s) 197, 486, 535
EcoT14I CCWWGG 1 cut(s) 784
EcoT38I GRGCYC 1 cut(s) 195
ErhI CCWWGG 1 cut(s) 784
FaeI CATG 9 cut(s) 108, 499, 688, 761, 766, 796, 889, 1054, 1100
FalI AAGNNNNNCTT 2 cut(s) 361, 393
FatI CATG 9 cut(s) 104, 495, 684, 757, 762, 792, 885, 1050, 1096
FauNDI CATATG 1 cut(s) 857
FbaI TGATCA 1 cut(s) 1099
FblI GTMKAC 1 cut(s) 1065
Fnu4HI GCNGC 7 cut(s) 25, 28, 80, 174, 177, 375, 1025
FokI GGATG 4 cut(s) 402, 1019, 1049, 1089
FriOI GRGCYC 1 cut(s) 195
Fsp4HI GCNGC 7 cut(s) 25, 28, 80, 174, 177, 375, 1025
FspBI CTAG 3 cut(s) 180, 320, 614
GluI GCNGC 7 cut(s) 25, 28, 80, 174, 177, 375, 1025
GsuI CTGGAG 1 cut(s) 783
HaeIII GGCC 7 cut(s) 193, 339, 486, 746, 949, 1027, 1049
HapII CCGG 1 cut(s) 21
HgaI GACGC 1 cut(s) 359
Hin1I GRCGYC 1 cut(s) 303
Hin1II CATG 9 cut(s) 108, 499, 688, 761, 766, 796, 889, 1054, 1100
HincII GTYRAC 1 cut(s) 1066
HindII GTYRAC 1 cut(s) 1066
HindIII AAGCTT 1 cut(s) 407
HinfI GANTC 1 cut(s) 940
HpaII CCGG 1 cut(s) 21
HphI GGTGA 1 cut(s) 928
Hpy166II GTNNAC 5 cut(s) 277, 545, 661, 844, 1066
Hpy188I TCNGA 7 cut(s) 63, 87, 96, 460, 913, 939, 945
Hpy188III TCNNGA 7 cut(s) 320, 386, 692, 758, 800, 896, 1097
Hpy8I GTNNAC 5 cut(s) 277, 545, 661, 844, 1066
Hpy99I CGWCG 2 cut(s) 296, 308
HpyAV CCTTC 2 cut(s) 234, 274
HpyCH4III ACNGT 4 cut(s) 274, 281, 709, 848
HpyCH4IV ACGT 2 cut(s) 303, 703
HpyCH4V TGCA 3 cut(s) 545, 623, 983
HpyF10VI GCNNNNNNNGC 4 cut(s) 88, 173, 359, 492
HpyF3I CTNAG 6 cut(s) 95, 368, 902, 910, 944, 1107
HpySE526I ACGT 2 cut(s) 303, 703
Hsp92I GRCGYC 1 cut(s) 303
Hsp92II CATG 9 cut(s) 108, 499, 688, 761, 766, 796, 889, 1054, 1100
Ksp22I TGATCA 1 cut(s) 1099
Kzo9I GATC 5 cut(s) 58, 220, 616, 898, 1099
LguI GCTCTTC 1 cut(s) 59
LmnI GCTCC 3 cut(s) 142, 802, 1095
Lsp1109I GCAGC 4 cut(s) 91, 185, 188, 386
LweI GCATC 2 cut(s) 100, 997
MaeI CTAG 3 cut(s) 180, 320, 614
MaeII ACGT 2 cut(s) 303, 703
MaeIII GTNAC 4 cut(s) 424, 788, 881, 916
MalI GATC 5 cut(s) 60, 222, 618, 900, 1101
MboI GATC 5 cut(s) 58, 220, 616, 898, 1099
MboII GAAGA 6 cut(s) 22, 76, 130, 170, 344, 664
MfeI CAATTG 1 cut(s) 605
MflI RGATCY 2 cut(s) 58, 616
MhlI GDGCHC 2 cut(s) 195, 547
MlsI TGGCCA 2 cut(s) 486, 1049
MluCI AATT 1 cut(s) 605
MluNI TGGCCA 2 cut(s) 486, 1049
MmeI TCCRAC 1 cut(s) 1035
Mox20I TGGCCA 2 cut(s) 486, 1049
MscI TGGCCA 2 cut(s) 486, 1049
MseI TTAA 2 cut(s) 312, 672
MslI CAYNNNNRTG 2 cut(s) 420, 666
Msp20I TGGCCA 2 cut(s) 486, 1049
MspI CCGG 1 cut(s) 21
MspR9I CCNGG 3 cut(s) 199, 488, 537
MunI CAATTG 1 cut(s) 605
MvaI CCWGG 3 cut(s) 199, 488, 537
MwoI GCNNNNNNNGC 4 cut(s) 88, 173, 359, 492
NdeI CATATG 1 cut(s) 857
NdeII GATC 5 cut(s) 58, 220, 616, 898, 1099
NlaIII CATG 9 cut(s) 108, 499, 688, 761, 766, 796, 889, 1054, 1100
NlaIV GGNNCC 6 cut(s) 192, 193, 262, 271, 781, 798
NmuCI GTSAC 2 cut(s) 881, 916
NspI RCATGY 3 cut(s) 499, 688, 889
PaeI GCATGC 1 cut(s) 499
PagI TCATGA 2 cut(s) 757, 1096
PceI AGGCCT 1 cut(s) 746
PciSI GCTCTTC 1 cut(s) 59
PcsI WCGNNNNNNNCGW 1 cut(s) 300
PfeI GAWTC 1 cut(s) 940
PkrI GCNGC 7 cut(s) 26, 29, 81, 175, 178, 376, 1026
Ppu21I YACGTR 1 cut(s) 704
PpuMI RGGWCCY 1 cut(s) 1139
Psp5II RGGWCCY 1 cut(s) 1139
Psp6I CCWGG 3 cut(s) 197, 486, 535
PspGI CCWGG 3 cut(s) 197, 486, 535
PspN4I GGNNCC 6 cut(s) 192, 193, 262, 271, 781, 798
PspOMI GGGCCC 1 cut(s) 191
PspPI GGNCC 7 cut(s) 49, 191, 192, 337, 948, 1026, 1139
PspPPI RGGWCCY 1 cut(s) 1139
PstNI CAGNNNCTG 1 cut(s) 943
PsuI RGATCY 2 cut(s) 58, 616
RsaI GTAC 2 cut(s) 706, 845
RsaNI GTAC 2 cut(s) 705, 844
RseI CAYNNNNRTG 2 cut(s) 420, 666
SalI GTCGAC 1 cut(s) 1064
SapI GCTCTTC 1 cut(s) 59
SaqAI TTAA 2 cut(s) 312, 672
SatI GCNGC 7 cut(s) 25, 28, 80, 174, 177, 375, 1025
Sau3AI GATC 5 cut(s) 58, 220, 616, 898, 1099
Sau96I GGNCC 7 cut(s) 49, 191, 192, 337, 948, 1026, 1139
ScrFI CCNGG 3 cut(s) 199, 488, 537
SduI GDGCHC 2 cut(s) 195, 547
SfaNI GCATC 2 cut(s) 100, 997
SgrAI CRCCGGYG 1 cut(s) 20
SinI GGWCC 2 cut(s) 49, 1139
SmiMI CAYNNNNRTG 2 cut(s) 420, 666
SmlI CTYRAG 1 cut(s) 384
SmoI CTYRAG 1 cut(s) 384
SphI GCATGC 1 cut(s) 499
Sse9I AATT 1 cut(s) 605
SseBI AGGCCT 1 cut(s) 746
SsiI CCGC 8 cut(s) 24, 27, 30, 47, 167, 571, 1024, 1080
SspMI CTAG 3 cut(s) 180, 320, 614
StuI AGGCCT 1 cut(s) 746
StyD4I CCNGG 3 cut(s) 197, 486, 535
StyI CCWWGG 1 cut(s) 784
TaaI ACNGT 4 cut(s) 274, 281, 709, 848
TaiI ACGT 2 cut(s) 306, 706
TaqI TCGA 3 cut(s) 525, 1065, 1135
TasI AATT 1 cut(s) 605
TatI WGTACW 1 cut(s) 843
TauI GCSGC 3 cut(s) 27, 30, 1027
TfiI GAWTC 1 cut(s) 940
Tru1I TTAA 2 cut(s) 312, 672
Tru9I TTAA 2 cut(s) 312, 672
TscAI CASTG 1 cut(s) 552
TseFI GTSAC 2 cut(s) 881, 916
TseI GCWGC 4 cut(s) 79, 173, 176, 374
Tsp45I GTSAC 2 cut(s) 881, 916
TspDTI ATGAA 2 cut(s) 17, 1007
TspGWI ACGGA 2 cut(s) 923, 1115
TspRI CASTG 1 cut(s) 552
VneI GTGCAC 1 cut(s) 543
VpaK11BI GGWCC 2 cut(s) 49, 1139
XbaI TCTAGA 1 cut(s) 319
XceI RCATGY 3 cut(s) 499, 688, 889
XmiI GTMKAC 1 cut(s) 1065
XspI CTAG 3 cut(s) 180, 320, 614
ZraI GACGTC 1 cut(s) 304
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.