Rw2G052020

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
79835407 .. 79839468
4062 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G052020.1

Sequence Viewer

Length: 1149 bp
ATGAAGGAGAAGAACGACACCGGCGGCGGCGGTGCGTATGTGAGGGCGGACCAGATAGATCTGAAGAGCTTGGACGAGCAGCTTCAGAAGCATCTGAGCAGGGCATGGACTATGGAGAAGAACAAGAACAGAGACCAGCAGGAGCAACAAGAACAAGAAGCGGAAGCGGAAGCAGCAGCAGCTAGGGTGGTGGGGCCCACCAGGAGGCAAGAGTGGGAGATTGATCCTTCCAAGCTCATAGTCAAGGGTGCTATTGCCAGAGGAACCTTCGGCACGGTCCACCGTGGCATTTACGACGGCATAGACGTCGCCGTTAAACTTCTAGATTGGGGAGAAGAGGGCCATAGAACTGACGCTGAAATAGCTTCTCTAAGAGCAGCTTTTACTCAAGAAGTTGCTGTGTGGCATAAGCTTGACCATCCTAATGTAACCAAGTTTATAGGGGCGACAATGGGAACATCAGAGCTGAACATACAAACAGATAATGGCCAGGTTGGCATGCCAAGTAATGTTTGTTGCGTTGTTGTCGAGTATTGTCCTGGTGGTGCACTGAAATCTTACCTCATAAAGAACCGCAGAAAGAAGCTGGCTTTCAAAGTAGTTGTCCAATTGGCACTAGATCTTGCACGAGGTTTATGCTATCTCCATTCACAGAAGATTGTTCACAGAGATGTTAAAACAGAAAACATGCTTCTGGACAAGACACGTACTGTAAAAATAGCTGACTTTGGGGTTGCTCGTGTGGAGGCCTCAAATCCTCATGACATGACAGGGGAGACTGGAACCCTTGGTTACATGGCTCCAGAGGTTCTCAACGGCAATCCATATAACAGGAAATGTGATGTGTACAGTTTTGGCATATGCTTGTGGGAAATATACTGCTGTGACATGCCGTATCCCGATCTTAGTTTCTCAGAGGTGACATCAGCTGTTGTCCGTCAGAATCTGAGGCCCGAGATACCTCGTTGTTGCCCAAGTTCTCTTGCAAATGTTATGAAGCGGTGTTGGGATGCTAACCCCGATAAGCGGCCTGAGATGGATGAGGTGGTGGCCATGTTGGAGGCTGTCGACACAACTAAAGGCGGAGGTATGCTCCCTCATGATCATCCTCAGGGTTGTCTCTGCTTCCGTAGGTATCGAGGACCTTGA

Protein Analysis

382

Amino Acids

42.63

Weight (kDa)

6.57

Isoelectric Point (pI)

33.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 82 - 351 2.8e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 83 - 353 9.5e-62 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 190 - 299 4.8e-06 Kinase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011710)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 309
AccI GTMKAC 1 cut(s) 1068
AclWI GGATC 1 cut(s) 218
AcoI YGGCCR 2 cut(s) 487, 1050
AcuI CTGAAG 2 cut(s) 68, 83
AcyI GRCGYC 1 cut(s) 306
AfaI GTAC 2 cut(s) 709, 848
AfiI CCNNNNNNNGG 2 cut(s) 204, 1026
AflIII ACRYGT 1 cut(s) 704
AgsI TTSAA 1 cut(s) 595
AjnI CCWGG 3 cut(s) 200, 489, 538
Alw21I GWGCWC 1 cut(s) 550
Alw26I GTCTC 3 cut(s) 126, 770, 1124
Alw44I GTGCAC 1 cut(s) 546
AlwI GGATC 1 cut(s) 218
AlwNI CAGNNNCTG 1 cut(s) 946
Ama87I CYCGRG 1 cut(s) 953
AoxI GGCC 7 cut(s) 194, 340, 487, 747, 950, 1028, 1050
ApaI GGGCCC 1 cut(s) 198
ApaLI GTGCAC 1 cut(s) 546
ApeKI GCWGC 5 cut(s) 79, 173, 176, 179, 377
ArsI GACNNNNNNTTYG 2 cut(s) 588, 620
AspS9I GGNCC 7 cut(s) 49, 194, 195, 277, 340, 951, 1142
AsuHPI GGTGA 1 cut(s) 931
AvaI CYCGRG 1 cut(s) 953
AvaII GGWCC 3 cut(s) 49, 277, 1142
AxyI CCTNAGG 1 cut(s) 1110
BaeGI GKGCMC 2 cut(s) 198, 550
BalI TGGCCA 2 cut(s) 489, 1052
BanII GRGCYC 1 cut(s) 198
BauI CACGAG 2 cut(s) 627, 738
Bbv12I GWGCWC 1 cut(s) 550
BbvI GCAGC 5 cut(s) 91, 185, 188, 191, 389
BccI CCATC 2 cut(s) 426, 1030
BceAI ACGGC 4 cut(s) 296, 313, 832, 877
BcgI CGANNNNNNTGC 4 cut(s) 289, 323, 618, 652
BciT130I CCWGG 3 cut(s) 202, 491, 540
BciVI GTATCC 1 cut(s) 906
BclI TGATCA 1 cut(s) 1102
BcoDI GTCTC 3 cut(s) 126, 770, 1124
BfaI CTAG 3 cut(s) 183, 323, 617
BfuI GTATCC 1 cut(s) 906
BglI GCCNNNNNGGC 1 cut(s) 495
BglII AGATCT 2 cut(s) 58, 619
BisI GCNGC 8 cut(s) 25, 28, 80, 174, 177, 180, 378, 1028
BlsI GCNGC 8 cut(s) 26, 29, 81, 175, 178, 181, 379, 1029
Bme1390I CCNGG 3 cut(s) 202, 491, 540
Bme18I GGWCC 3 cut(s) 49, 277, 1142
BmeT110I CYCGRG 1 cut(s) 953
BmgT120I GGNCC 7 cut(s) 49, 194, 195, 277, 340, 951, 1142
BmiI GGNNCC 5 cut(s) 195, 196, 265, 784, 801
BmrFI CCNGG 3 cut(s) 202, 491, 540
BmsI GCATC 2 cut(s) 100, 1000
BplI GAGNNNNNCTC 2 cut(s) 1077, 1109
BpmI CTGGAG 1 cut(s) 786
BpuEI CTTGAG 1 cut(s) 372
BsaAI YACGTR 1 cut(s) 707
BsaHI GRCGYC 1 cut(s) 306
BsaI GGTCTC 1 cut(s) 126
BsaJI CCNNGG 2 cut(s) 283, 787
Bsc4I CCNNNNNNNGG 2 cut(s) 204, 1026
Bse118I RCCGGY 1 cut(s) 20
Bse1I ACTGG 1 cut(s) 784
Bse21I CCTNAGG 1 cut(s) 1110
BseBI CCWGG 3 cut(s) 202, 491, 540
BseDI CCNNGG 2 cut(s) 283, 787
BseGI GGATG 4 cut(s) 418, 1015, 1045, 1105
BseLI CCNNNNNNNGG 2 cut(s) 204, 1026
BseMII CTCAG 5 cut(s) 86, 927, 938, 1023, 1124
BseNI ACTGG 1 cut(s) 784
BseSI GKGCMC 2 cut(s) 198, 550
BseXI GCAGC 5 cut(s) 91, 185, 188, 191, 389
BshFI GGCC 7 cut(s) 196, 342, 489, 749, 952, 1030, 1052
BsiHKAI GWGCWC 1 cut(s) 550
BsiHKCI CYCGRG 1 cut(s) 953
BsiSI CCGG 1 cut(s) 21
BslI CCNNNNNNNGG 2 cut(s) 204, 1026
BsmAI GTCTC 3 cut(s) 126, 770, 1124
BsnI GGCC 7 cut(s) 196, 342, 489, 749, 952, 1030, 1052
Bso31I GGTCTC 1 cut(s) 126
BsoBI CYCGRG 1 cut(s) 953
Bsp120I GGGCCC 1 cut(s) 194
Bsp1286I GDGCHC 2 cut(s) 198, 550
Bsp1407I TGTACA 1 cut(s) 846
Bsp143I GATC 5 cut(s) 58, 223, 619, 901, 1102
BspANI GGCC 7 cut(s) 196, 342, 489, 749, 952, 1030, 1052
BspCNI CTCAG 5 cut(s) 87, 926, 939, 1024, 1123
BspHI TCATGA 2 cut(s) 760, 1099
BspLI GGNNCC 5 cut(s) 195, 196, 265, 784, 801
BspPI GGATC 1 cut(s) 218
BspQI GCTCTTC 1 cut(s) 59
BspTNI GGTCTC 1 cut(s) 126
BsrFI RCCGGY 1 cut(s) 20
BsrGI TGTACA 1 cut(s) 846
BsrI ACTGG 1 cut(s) 784
BssAI RCCGGY 1 cut(s) 20
BssECI CCNNGG 2 cut(s) 283, 787
BssMI GATC 5 cut(s) 58, 223, 619, 901, 1102
BssNI GRCGYC 1 cut(s) 306
BssSI CACGAG 2 cut(s) 627, 738
BssT1I CCWWGG 1 cut(s) 787
Bst2BI CACGAG 2 cut(s) 627, 738
Bst2UI CCWGG 3 cut(s) 202, 491, 540
Bst4CI ACNGT 4 cut(s) 277, 284, 712, 851
Bst6I CTCTTC 2 cut(s) 59, 330
BstACI GRCGYC 1 cut(s) 306
BstAUI TGTACA 1 cut(s) 846
BstBAI YACGTR 1 cut(s) 707
BstC8I GCNNGC 2 cut(s) 500, 588
BstDEI CTNAG 7 cut(s) 95, 371, 905, 913, 947, 1032, 1110
BstDSI CCRYGG 1 cut(s) 283
BstF5I GGATG 4 cut(s) 418, 1015, 1045, 1105
BstKTI GATC 5 cut(s) 61, 226, 622, 904, 1105
BstMAI GTCTC 3 cut(s) 126, 770, 1124
BstMBI GATC 5 cut(s) 58, 223, 619, 901, 1102
BstMWI GCNNNNNNNGC 5 cut(s) 88, 173, 179, 362, 495
BstNI CCWGG 3 cut(s) 202, 491, 540
BstNSI RCATGY 3 cut(s) 502, 691, 892
BstSCI CCNGG 3 cut(s) 200, 489, 538
BstSLI GKGCMC 2 cut(s) 198, 550
BstV1I GCAGC 5 cut(s) 91, 185, 188, 191, 389
BstX2I RGATCY 2 cut(s) 58, 619
BstYI RGATCY 2 cut(s) 58, 619
Bsu36I CCTNAGG 1 cut(s) 1110
BsuI GTATCC 1 cut(s) 906
BsuRI GGCC 7 cut(s) 196, 342, 489, 749, 952, 1030, 1052
BtgI CCRYGG 1 cut(s) 283
BtsCI GGATG 4 cut(s) 418, 1015, 1045, 1105
BtsIMutI CAGTG 1 cut(s) 548
Cac8I GCNNGC 2 cut(s) 500, 588
CaiI CAGNNNCTG 1 cut(s) 946
CciI TCATGA 2 cut(s) 760, 1099
Cfr10I RCCGGY 1 cut(s) 20
Cfr13I GGNCC 7 cut(s) 49, 194, 195, 277, 340, 951, 1142
CseI GACGC 1 cut(s) 362
Csp6I GTAC 2 cut(s) 708, 847
CviAII CATG 9 cut(s) 105, 499, 688, 761, 766, 796, 889, 1054, 1100
CviQI GTAC 2 cut(s) 708, 847
DdeI CTNAG 7 cut(s) 95, 371, 905, 913, 947, 1032, 1110
DpnI GATC 5 cut(s) 60, 225, 621, 903, 1104
DpnII GATC 5 cut(s) 58, 223, 619, 901, 1102
EaeI YGGCCR 2 cut(s) 487, 1050
Eam1104I CTCTTC 2 cut(s) 59, 330
EarI CTCTTC 2 cut(s) 59, 330
EciI GGCGGA 2 cut(s) 62, 1098
Eco130I CCWWGG 1 cut(s) 787
Eco147I AGGCCT 1 cut(s) 749
Eco24I GRGCYC 1 cut(s) 198
Eco31I GGTCTC 1 cut(s) 126
Eco47I GGWCC 3 cut(s) 49, 277, 1142
Eco57I CTGAAG 2 cut(s) 68, 83
Eco81I CCTNAGG 1 cut(s) 1110
Eco88I CYCGRG 1 cut(s) 953
EcoO109I RGGNCCY 2 cut(s) 194, 1142
EcoRII CCWGG 3 cut(s) 200, 489, 538
EcoT14I CCWWGG 1 cut(s) 787
EcoT38I GRGCYC 1 cut(s) 198
ErhI CCWWGG 1 cut(s) 787
FaeI CATG 9 cut(s) 108, 502, 691, 764, 769, 799, 892, 1057, 1103
FalI AAGNNNNNCTT 2 cut(s) 364, 396
FatI CATG 9 cut(s) 104, 498, 687, 760, 765, 795, 888, 1053, 1099
FauNDI CATATG 1 cut(s) 860
FbaI TGATCA 1 cut(s) 1102
FblI GTMKAC 1 cut(s) 1068
Fnu4HI GCNGC 8 cut(s) 25, 28, 80, 174, 177, 180, 378, 1028
FokI GGATG 4 cut(s) 405, 1022, 1052, 1092
FriOI GRGCYC 1 cut(s) 198
Fsp4HI GCNGC 8 cut(s) 25, 28, 80, 174, 177, 180, 378, 1028
FspBI CTAG 3 cut(s) 183, 323, 617
GluI GCNGC 8 cut(s) 25, 28, 80, 174, 177, 180, 378, 1028
GsuI CTGGAG 1 cut(s) 786
HaeIII GGCC 7 cut(s) 196, 342, 489, 749, 952, 1030, 1052
HapII CCGG 1 cut(s) 21
HgaI GACGC 1 cut(s) 362
Hin1I GRCGYC 1 cut(s) 306
Hin1II CATG 9 cut(s) 108, 502, 691, 764, 769, 799, 892, 1057, 1103
HincII GTYRAC 1 cut(s) 1069
HindII GTYRAC 1 cut(s) 1069
HindIII AAGCTT 1 cut(s) 410
HinfI GANTC 1 cut(s) 943
HpaII CCGG 1 cut(s) 21
HphI GGTGA 1 cut(s) 931
Hpy166II GTNNAC 5 cut(s) 280, 548, 664, 847, 1069
Hpy188I TCNGA 7 cut(s) 63, 87, 96, 463, 916, 942, 948
Hpy188III TCNNGA 7 cut(s) 323, 389, 695, 761, 803, 899, 1100
Hpy8I GTNNAC 5 cut(s) 280, 548, 664, 847, 1069
Hpy99I CGWCG 2 cut(s) 299, 311
HpyAV CCTTC 2 cut(s) 237, 277
HpyCH4III ACNGT 4 cut(s) 277, 284, 712, 851
HpyCH4IV ACGT 2 cut(s) 306, 706
HpyCH4V TGCA 3 cut(s) 548, 626, 986
HpyF10VI GCNNNNNNNGC 5 cut(s) 88, 173, 179, 362, 495
HpyF3I CTNAG 7 cut(s) 95, 371, 905, 913, 947, 1032, 1110
HpySE526I ACGT 2 cut(s) 306, 706
Hsp92I GRCGYC 1 cut(s) 306
Hsp92II CATG 9 cut(s) 108, 502, 691, 764, 769, 799, 892, 1057, 1103
Ksp22I TGATCA 1 cut(s) 1102
Kzo9I GATC 5 cut(s) 58, 223, 619, 901, 1102
LguI GCTCTTC 1 cut(s) 59
LmnI GCTCC 3 cut(s) 142, 805, 1098
Lsp1109I GCAGC 5 cut(s) 91, 185, 188, 191, 389
LweI GCATC 2 cut(s) 100, 1000
MaeI CTAG 3 cut(s) 183, 323, 617
MaeII ACGT 2 cut(s) 306, 706
MaeIII GTNAC 4 cut(s) 427, 791, 884, 919
MalI GATC 5 cut(s) 60, 225, 621, 903, 1104
MboI GATC 5 cut(s) 58, 223, 619, 901, 1102
MboII GAAGA 5 cut(s) 22, 76, 130, 347, 667
MfeI CAATTG 1 cut(s) 608
MflI RGATCY 2 cut(s) 58, 619
MhlI GDGCHC 2 cut(s) 198, 550
MlsI TGGCCA 2 cut(s) 489, 1052
MluCI AATT 1 cut(s) 608
MluNI TGGCCA 2 cut(s) 489, 1052
MmeI TCCRAC 1 cut(s) 1038
Mox20I TGGCCA 2 cut(s) 489, 1052
MscI TGGCCA 2 cut(s) 489, 1052
MseI TTAA 2 cut(s) 315, 675
MslI CAYNNNNRTG 2 cut(s) 423, 669
Msp20I TGGCCA 2 cut(s) 489, 1052
MspA1I CMGCKG 1 cut(s) 929
MspI CCGG 1 cut(s) 21
MspR9I CCNGG 3 cut(s) 202, 491, 540
MunI CAATTG 1 cut(s) 608
MvaI CCWGG 3 cut(s) 202, 491, 540
MwoI GCNNNNNNNGC 5 cut(s) 88, 173, 179, 362, 495
NdeI CATATG 1 cut(s) 860
NdeII GATC 5 cut(s) 58, 223, 619, 901, 1102
NlaIII CATG 9 cut(s) 108, 502, 691, 764, 769, 799, 892, 1057, 1103
NlaIV GGNNCC 5 cut(s) 195, 196, 265, 784, 801
NmuCI GTSAC 2 cut(s) 884, 919
NspI RCATGY 3 cut(s) 502, 691, 892
PaeI GCATGC 1 cut(s) 502
PagI TCATGA 2 cut(s) 760, 1099
PceI AGGCCT 1 cut(s) 749
PciSI GCTCTTC 1 cut(s) 59
PcsI WCGNNNNNNNCGW 1 cut(s) 303
PfeI GAWTC 1 cut(s) 943
PkrI GCNGC 8 cut(s) 26, 29, 81, 175, 178, 181, 379, 1029
Ppu21I YACGTR 1 cut(s) 707
PpuMI RGGWCCY 1 cut(s) 1142
Psp5II RGGWCCY 1 cut(s) 1142
Psp6I CCWGG 3 cut(s) 200, 489, 538
PspGI CCWGG 3 cut(s) 200, 489, 538
PspN4I GGNNCC 5 cut(s) 195, 196, 265, 784, 801
PspOMI GGGCCC 1 cut(s) 194
PspPI GGNCC 7 cut(s) 49, 194, 195, 277, 340, 951, 1142
PspPPI RGGWCCY 1 cut(s) 1142
PstNI CAGNNNCTG 1 cut(s) 946
PsuI RGATCY 2 cut(s) 58, 619
PvuII CAGCTG 1 cut(s) 929
RsaI GTAC 2 cut(s) 709, 848
RsaNI GTAC 2 cut(s) 708, 847
RseI CAYNNNNRTG 2 cut(s) 423, 669
SalI GTCGAC 1 cut(s) 1067
SapI GCTCTTC 1 cut(s) 59
SaqAI TTAA 2 cut(s) 315, 675
SatI GCNGC 8 cut(s) 25, 28, 80, 174, 177, 180, 378, 1028
Sau3AI GATC 5 cut(s) 58, 223, 619, 901, 1102
Sau96I GGNCC 7 cut(s) 49, 194, 195, 277, 340, 951, 1142
ScrFI CCNGG 3 cut(s) 202, 491, 540
SduI GDGCHC 2 cut(s) 198, 550
SfaNI GCATC 2 cut(s) 100, 1000
SgrAI CRCCGGYG 1 cut(s) 20
SinI GGWCC 3 cut(s) 49, 277, 1142
SmiMI CAYNNNNRTG 2 cut(s) 423, 669
SmlI CTYRAG 1 cut(s) 387
SmoI CTYRAG 1 cut(s) 387
SphI GCATGC 1 cut(s) 502
Sse9I AATT 1 cut(s) 608
SseBI AGGCCT 1 cut(s) 749
SspMI CTAG 3 cut(s) 183, 323, 617
StuI AGGCCT 1 cut(s) 749
StyD4I CCNGG 3 cut(s) 200, 489, 538
StyI CCWWGG 1 cut(s) 787
TaaI ACNGT 4 cut(s) 277, 284, 712, 851
TaiI ACGT 2 cut(s) 309, 709
TaqI TCGA 3 cut(s) 528, 1068, 1138
TasI AATT 1 cut(s) 608
TatI WGTACW 1 cut(s) 846
TauI GCSGC 3 cut(s) 27, 30, 1030
TfiI GAWTC 1 cut(s) 943
Tru1I TTAA 2 cut(s) 315, 675
Tru9I TTAA 2 cut(s) 315, 675
TscAI CASTG 1 cut(s) 555
TseFI GTSAC 2 cut(s) 884, 919
TseI GCWGC 5 cut(s) 79, 173, 176, 179, 377
Tsp45I GTSAC 2 cut(s) 884, 919
TspDTI ATGAA 2 cut(s) 17, 1010
TspGWI ACGGA 2 cut(s) 926, 1118
TspRI CASTG 1 cut(s) 555
VneI GTGCAC 1 cut(s) 546
VpaK11BI GGWCC 3 cut(s) 49, 277, 1142
XbaI TCTAGA 1 cut(s) 322
XceI RCATGY 3 cut(s) 502, 691, 892
XmiI GTMKAC 1 cut(s) 1068
XspI CTAG 3 cut(s) 183, 323, 617
ZraI GACGTC 1 cut(s) 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.