Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0011710

Physical Location & Seq

Genomic Coordinates Reverse (-)

25757353 .. 25762118

Gene Structure 4766 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G283600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1125 bp

ATGAAGGAGAAGAGTGAGAGTGGCGGTGGGTATGTGAGAGCGGATCAGATAGATCTGAAGAGTTTGGACGAACAGCTCCAGAGGCACCTGAACAGAGCATGGACTATGGAGAAGAACAAGACGAGAGAGGAAGAGGAAGAGGAAGAGGAAGAAGCAGCATCAAGGCAGACTGCTGCCACAAGGCAAGACTGGGAGATTGATCCCTCCAAACTCACCGTCAAGGGTGCCATAGCTCGAGGCTCTTTTGGTACTGTTCACCGTGGCATTTATGATGGCCAAGATGTTGCTGTTAAACTTCTAGATTGGGGAGAAGAGGGACATAGATCAGACGCTGAAATAGCTTCTCTAAGAGCAGCTTTTACTCAAGAAGTTGCTGTCTGGCATAAGCTTGACCACCCTAATGTGACCAAGTTTATAGGGGCTACAATGGGAACATCAGAGCTACACATACAAACAGATAATGGCCAAGTTGGCATGCCAAGTAACGTTTGTTGTGTTGTTGTTGAATATTGTCCTGGTGGCGCACTGAAATCTTACCTCATAAAGAACCGCAGAAAGAAGCTTGCATTCAAACTAGTCGTCCAACTGGCACTAGATCTTGCACGAGGTTTGTGCTATCTTCATTCGAAGAAGATTGTTCACAGAGATGTTAAAACGGAAAACATGCTTCTAGACAAGACACGAACAGTAAAGATAGCGGACTTTGGGGTTGCTCGTGTTGAGGCTTCAAATCCTAATGACATGACTGGCGAGACTGGAACCCTTGGTTACATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTGTACAGTTTTGGTATCTGCTTGTGGGAAATATACTGCTGTGACATGCCGTATCCTGATCTTAGCTTCTCGGAAGTGACATCAGCCGTTGTCCGCCAGAATCTGAGGCCTGAGATGCCTCGTTGTTGCCCAAGCTCTCTTGCAAATGTAATGAAGCGATGTTGGGATGCAAACCCTGACAAGCGGCCGGAGATGGATGAGGTGGTGGCCATGTTGGAGGCTATTGACACATCTAAAGGTGGAGGTATGATCCCTGGGGATCAGCCTCAGGGCTGTTTCTGTTTCCGCAGGTACCGAGGACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

375

Amino Acids

41.88

Weight (kDa)

5.99

Isoelectric Point (pI)

40.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011710)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01490 AT3G01490
fragaria_vesca	FvH4_6g50600 FvH4_6g50600
malus_domestica	MD09G1034900.v1.1
prunus_persica	Prupe.3G283600_v2.0.a1 Prupe.3G283600_v2.0.a1
pyrus_communis	pycom111g02780
rosa_chinensis	RchiOBHm_Chr2g0171391
rosa_laevigata	RLG00000022009
rosa_multiflora	Rmu_sc0007646.1_g000009
rosa_roxburghii	Rroxscaffold_2G00080700
rosa_rugosa	Rorug02G0553600 Rorug02G0553700
rosa_samantha	Rh2AG628100 Rh2BG638500 Rh2DG649500 Rh2DG655600
rosa_wichuraiana	Rw2G052020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1098
Acc65I	GGTACC	1 cut(s)	1110
AccB1I	GGYRCC	3 cut(s)	84, 224, 1110
AccBSI	CCGCTC	1 cut(s)	41
AciI	CCGC	7 cut(s)	24, 41, 550, 698, 913, 1003, 1105
AclI	AACGTT	1 cut(s)	486
AclWI	GGATC	4 cut(s)	51, 194, 1063, 1086
AcoI	YGGCCR	4 cut(s)	274, 463, 1004, 1026
AcuI	CTGAAG	1 cut(s)	77
AfaI	GTAC	3 cut(s)	250, 824, 1112
AgsI	TTSAA	3 cut(s)	506, 571, 729
AhlI	ACTAGT	1 cut(s)	574
AjnI	CCWGG	2 cut(s)	514, 1072
AluBI	AGCT	9 cut(s)	76, 233, 341, 356, 388, 442, 562, 885, 954
AluI	AGCT	9 cut(s)	76, 233, 341, 356, 388, 442, 562, 885, 954
Alw26I	GTCTC	1 cut(s)	746
AlwI	GGATC	4 cut(s)	51, 194, 1063, 1086
AlwNI	CAGNNNCTG	2 cut(s)	332, 922
Ama87I	CYCGRG	1 cut(s)	234
AoxI	GGCC	5 cut(s)	274, 463, 926, 1004, 1026
ApeKI	GCWGC	3 cut(s)	155, 173, 353
ArsI	GACNNNNNNTTYG	4 cut(s)	201, 233, 564, 596
Asp718I	GGTACC	1 cut(s)	1110
AspLEI	GCGC	1 cut(s)	524
AspS9I	GGNCC	1 cut(s)	1118
AsuHPI	GGTGA	2 cut(s)	205, 248
AsuII	TTCGAA	1 cut(s)	626
AvaI	CYCGRG	1 cut(s)	234
AvaII	GGWCC	1 cut(s)	1118
AxyI	CCTNAGG	1 cut(s)	1086
BalI	TGGCCA	3 cut(s)	276, 465, 1028
BanI	GGYRCC	3 cut(s)	84, 224, 1110
BauI	CACGAG	2 cut(s)	603, 714
BbvI	GCAGC	3 cut(s)	160, 167, 365
BccI	CCATC	2 cut(s)	266, 1006
BceAI	ACGGC	2 cut(s)	853, 890
BcgI	CGANNNNNNTGC	2 cut(s)	594, 628
BciT130I	CCWGG	2 cut(s)	516, 1074
BciVI	GTATCC	1 cut(s)	882
BcoDI	GTCTC	1 cut(s)	746
BcuI	ACTAGT	1 cut(s)	574
BfaI	CTAG	4 cut(s)	299, 575, 593, 671
BfuAI	ACCTGC	1 cut(s)	1098
BfuI	GTATCC	1 cut(s)	882
BglI	GCCNNNNNGGC	1 cut(s)	471
BglII	AGATCT	2 cut(s)	52, 595
BisI	GCNGC	4 cut(s)	156, 174, 354, 1004
BlsI	GCNGC	4 cut(s)	157, 175, 355, 1005
Bme1390I	CCNGG	2 cut(s)	516, 1074
Bme18I	GGWCC	1 cut(s)	1118
BmeT110I	CYCGRG	1 cut(s)	234
BmgT120I	GGNCC	1 cut(s)	1118
BmiI	GGNNCC	5 cut(s)	86, 226, 760, 777, 1112
BmrFI	CCNGG	2 cut(s)	516, 1074
BmrI	ACTGGG	1 cut(s)	199
BmsI	GCATC	3 cut(s)	167, 924, 976
BmuI	ACTGGG	1 cut(s)	199
BpmI	CTGGAG	2 cut(s)	62, 762
Bpu14I	TTCGAA	1 cut(s)	626
BpuEI	CTTGAG	1 cut(s)	348
BsaJI	CCNNGG	5 cut(s)	259, 763, 1072, 1073, 1114
Bse1I	ACTGG	4 cut(s)	194, 591, 751, 760
Bse21I	CCTNAGG	1 cut(s)	1086
BseBI	CCWGG	2 cut(s)	516, 1074
BseDI	CCNNGG	5 cut(s)	259, 763, 1072, 1073, 1114
BseGI	GGATG	2 cut(s)	991, 1021
BseMII	CTCAG	3 cut(s)	914, 921, 1100
BseNI	ACTGG	4 cut(s)	194, 591, 751, 760
BseX3I	CGGCCG	1 cut(s)	1004
BseXI	GCAGC	3 cut(s)	160, 167, 365
Bsh1285I	CGRYCG	1 cut(s)	1007
BshFI	GGCC	5 cut(s)	276, 465, 928, 1006, 1028
BshNI	GGYRCC	3 cut(s)	84, 224, 1110
BsiEI	CGRYCG	1 cut(s)	1007
BsiHKCI	CYCGRG	1 cut(s)	234
BsiSI	CCGG	1 cut(s)	1007
BslFI	GGGAC	1 cut(s)	330
BsmAI	GTCTC	1 cut(s)	746
BsmFI	GGGAC	1 cut(s)	330
BsmI	GAATGC	1 cut(s)	566
BsnI	GGCC	5 cut(s)	276, 465, 928, 1006, 1028
BsoBI	CYCGRG	1 cut(s)	234
Bsp119I	TTCGAA	1 cut(s)	626
Bsp1407I	TGTACA	1 cut(s)	822
Bsp143I	GATC	8 cut(s)	43, 52, 199, 323, 595, 877, 1068, 1078
BspACI	CCGC	7 cut(s)	24, 41, 550, 698, 913, 1003, 1105
BspANI	GGCC	5 cut(s)	276, 465, 928, 1006, 1028
BspCNI	CTCAG	3 cut(s)	915, 922, 1099
BspLI	GGNNCC	5 cut(s)	86, 226, 760, 777, 1112
BspMI	ACCTGC	1 cut(s)	1098
BspPI	GGATC	4 cut(s)	51, 194, 1063, 1086
BspT104I	TTCGAA	1 cut(s)	626
BspT107I	GGYRCC	3 cut(s)	84, 224, 1110
BsrBI	CCGCTC	1 cut(s)	41
BsrGI	TGTACA	1 cut(s)	822
BsrI	ACTGG	4 cut(s)	194, 591, 751, 760
BssECI	CCNNGG	5 cut(s)	259, 763, 1072, 1073, 1114
BssMI	GATC	8 cut(s)	43, 52, 199, 323, 595, 877, 1068, 1078
BssSI	CACGAG	2 cut(s)	603, 714
BssT1I	CCWWGG	1 cut(s)	763
Bst2BI	CACGAG	2 cut(s)	603, 714
Bst2UI	CCWGG	2 cut(s)	516, 1074
Bst4CI	ACNGT	5 cut(s)	217, 253, 260, 688, 827
Bst6I	CTCTTC	6 cut(s)	5, 53, 126, 132, 138, 306
BstAUI	TGTACA	1 cut(s)	822
BstBI	TTCGAA	1 cut(s)	626
BstC8I	GCNNGC	2 cut(s)	476, 564
BstDEI	CTNAG	5 cut(s)	347, 881, 923, 930, 1086
BstDSI	CCRYGG	1 cut(s)	259
BstF5I	GGATG	2 cut(s)	991, 1021
BstHHI	GCGC	1 cut(s)	524
BstKTI	GATC	8 cut(s)	46, 55, 202, 326, 598, 880, 1071, 1081
BstMAI	GTCTC	1 cut(s)	746
BstMBI	GATC	8 cut(s)	43, 52, 199, 323, 595, 877, 1068, 1078
BstMCI	CGRYCG	1 cut(s)	1007
BstMWI	GCNNNNNNNGC	4 cut(s)	82, 338, 471, 934
BstNI	CCWGG	2 cut(s)	516, 1074
BstNSI	RCATGY	3 cut(s)	478, 667, 868
BstSCI	CCNGG	2 cut(s)	514, 1072
BstV1I	GCAGC	3 cut(s)	160, 167, 365
BstX2I	RGATCY	2 cut(s)	52, 595
BstYI	RGATCY	2 cut(s)	52, 595
BstZI	CGGCCG	1 cut(s)	1004
Bsu36I	CCTNAGG	1 cut(s)	1086
BsuI	GTATCC	1 cut(s)	882
BsuRI	GGCC	5 cut(s)	276, 465, 928, 1006, 1028
BtgI	CCRYGG	1 cut(s)	259
BtgZI	GCGATG	1 cut(s)	991
BtsCI	GGATG	2 cut(s)	991, 1021
BtsIMutI	CAGTG	1 cut(s)	524
BveI	ACCTGC	1 cut(s)	1098
Cac8I	GCNNGC	2 cut(s)	476, 564
CaiI	CAGNNNCTG	2 cut(s)	332, 922
CfoI	GCGC	1 cut(s)	524
Cfr13I	GGNCC	1 cut(s)	1118
CseI	GACGC	1 cut(s)	338
Csp6I	GTAC	3 cut(s)	249, 823, 1111
CviAII	CATG	8 cut(s)	99, 475, 664, 742, 772, 865, 1030, 1122
CviQI	GTAC	3 cut(s)	249, 823, 1111
DdeI	CTNAG	5 cut(s)	347, 881, 923, 930, 1086
DpnI	GATC	8 cut(s)	45, 54, 201, 325, 597, 879, 1070, 1080
DpnII	GATC	8 cut(s)	43, 52, 199, 323, 595, 877, 1068, 1078
EaeI	YGGCCR	4 cut(s)	274, 463, 1004, 1026
EagI	CGGCCG	1 cut(s)	1004
Eam1104I	CTCTTC	6 cut(s)	5, 53, 126, 132, 138, 306
EarI	CTCTTC	6 cut(s)	5, 53, 126, 132, 138, 306
EciI	GGCGGA	1 cut(s)	902
EclXI	CGGCCG	1 cut(s)	1004
Eco130I	CCWWGG	1 cut(s)	763
Eco147I	AGGCCT	1 cut(s)	928
Eco47I	GGWCC	1 cut(s)	1118
Eco52I	CGGCCG	1 cut(s)	1004
Eco57I	CTGAAG	1 cut(s)	77
Eco81I	CCTNAGG	1 cut(s)	1086
Eco88I	CYCGRG	1 cut(s)	234
EcoRII	CCWGG	2 cut(s)	514, 1072
EcoT14I	CCWWGG	1 cut(s)	763
ErhI	CCWWGG	1 cut(s)	763
FaeI	CATG	8 cut(s)	102, 478, 667, 745, 775, 868, 1033, 1125
FalI	AAGNNNNNCTT	2 cut(s)	340, 372
FaqI	GGGAC	1 cut(s)	330
FatI	CATG	8 cut(s)	98, 474, 663, 741, 771, 864, 1029, 1121
Fnu4HI	GCNGC	4 cut(s)	156, 174, 354, 1004
FokI	GGATG	2 cut(s)	998, 1028
Fsp4HI	GCNGC	4 cut(s)	156, 174, 354, 1004
FspBI	CTAG	4 cut(s)	299, 575, 593, 671
GlaI	GCGC	1 cut(s)	523
GluI	GCNGC	4 cut(s)	156, 174, 354, 1004
GsuI	CTGGAG	2 cut(s)	62, 762
HaeIII	GGCC	5 cut(s)	276, 465, 928, 1006, 1028
HapII	CCGG	1 cut(s)	1007
HgaI	GACGC	1 cut(s)	338
HhaI	GCGC	1 cut(s)	524
Hin1II	CATG	8 cut(s)	102, 478, 667, 745, 775, 868, 1033, 1125
Hin6I	GCGC	1 cut(s)	522
HinP1I	GCGC	1 cut(s)	522
HindIII	AAGCTT	2 cut(s)	386, 560
HinfI	GANTC	1 cut(s)	919
HpaII	CCGG	1 cut(s)	1007
HphI	GGTGA	2 cut(s)	205, 248
Hpy166II	GTNNAC	3 cut(s)	256, 640, 823
Hpy188I	TCNGA	6 cut(s)	48, 57, 328, 439, 892, 924
Hpy188III	TCNNGA	6 cut(s)	79, 299, 365, 671, 779, 875
Hpy8I	GTNNAC	3 cut(s)	256, 640, 823
HpyCH4III	ACNGT	5 cut(s)	217, 253, 260, 688, 827
HpyCH4IV	ACGT	1 cut(s)	486
HpyCH4V	TGCA	4 cut(s)	566, 602, 962, 989
HpyF10VI	GCNNNNNNNGC	4 cut(s)	82, 338, 471, 934
HpyF3I	CTNAG	5 cut(s)	347, 881, 923, 930, 1086
HpySE526I	ACGT	1 cut(s)	486
Hsp92II	CATG	8 cut(s)	102, 478, 667, 745, 775, 868, 1033, 1125
HspAI	GCGC	1 cut(s)	522
KpnI	GGTACC	1 cut(s)	1114
Kzo9I	GATC	8 cut(s)	43, 52, 199, 323, 595, 877, 1068, 1078
LmnI	GCTCC	2 cut(s)	81, 781
Lsp1109I	GCAGC	3 cut(s)	160, 167, 365
LweI	GCATC	3 cut(s)	167, 924, 976
MaeI	CTAG	4 cut(s)	299, 575, 593, 671
MaeII	ACGT	1 cut(s)	486
MaeIII	GTNAC	5 cut(s)	403, 482, 767, 860, 895
MalI	GATC	8 cut(s)	45, 54, 201, 325, 597, 879, 1070, 1080
MbiI	CCGCTC	1 cut(s)	41
MboI	GATC	8 cut(s)	43, 52, 199, 323, 595, 877, 1068, 1078
MflI	RGATCY	2 cut(s)	52, 595
MlsI	TGGCCA	3 cut(s)	276, 465, 1028
MluNI	TGGCCA	3 cut(s)	276, 465, 1028
MmeI	TCCRAC	2 cut(s)	607, 1014
Mox20I	TGGCCA	3 cut(s)	276, 465, 1028
MscI	TGGCCA	3 cut(s)	276, 465, 1028
MseI	TTAA	2 cut(s)	291, 651
MslI	CAYNNNNRTG	2 cut(s)	399, 645
Msp20I	TGGCCA	3 cut(s)	276, 465, 1028
MspI	CCGG	1 cut(s)	1007
MspR9I	CCNGG	2 cut(s)	516, 1074
Mva1269I	GAATGC	1 cut(s)	566
MvaI	CCWGG	2 cut(s)	516, 1074
MwoI	GCNNNNNNNGC	4 cut(s)	82, 338, 471, 934
NdeII	GATC	8 cut(s)	43, 52, 199, 323, 595, 877, 1068, 1078
NlaIII	CATG	8 cut(s)	102, 478, 667, 745, 775, 868, 1033, 1125
NlaIV	GGNNCC	5 cut(s)	86, 226, 760, 777, 1112
NmuCI	GTSAC	3 cut(s)	403, 860, 895
NspI	RCATGY	3 cut(s)	478, 667, 868
NspV	TTCGAA	1 cut(s)	626
PaeI	GCATGC	1 cut(s)	478
PaeR7I	CTCGAG	1 cut(s)	234
PasI	CCCWGGG	1 cut(s)	1073
PceI	AGGCCT	1 cut(s)	928
PctI	GAATGC	1 cut(s)	566
PfeI	GAWTC	1 cut(s)	919
PkrI	GCNGC	4 cut(s)	157, 175, 355, 1005
Psp1406I	AACGTT	1 cut(s)	486
Psp6I	CCWGG	2 cut(s)	514, 1072
PspGI	CCWGG	2 cut(s)	514, 1072
PspN4I	GGNNCC	5 cut(s)	86, 226, 760, 777, 1112
PspPI	GGNCC	1 cut(s)	1118
PspXI	VCTCGAGB	1 cut(s)	234
PstNI	CAGNNNCTG	2 cut(s)	332, 922
PsuI	RGATCY	2 cut(s)	52, 595
RsaI	GTAC	3 cut(s)	250, 824, 1112
RsaNI	GTAC	3 cut(s)	249, 823, 1111
RseI	CAYNNNNRTG	2 cut(s)	399, 645
SaqAI	TTAA	2 cut(s)	291, 651
SatI	GCNGC	4 cut(s)	156, 174, 354, 1004
Sau3AI	GATC	8 cut(s)	43, 52, 199, 323, 595, 877, 1068, 1078
Sau96I	GGNCC	1 cut(s)	1118
ScrFI	CCNGG	2 cut(s)	516, 1074
SfaNI	GCATC	3 cut(s)	167, 924, 976
Sfr274I	CTCGAG	1 cut(s)	234
SfuI	TTCGAA	1 cut(s)	626
SinI	GGWCC	1 cut(s)	1118
SlaI	CTCGAG	1 cut(s)	234
SmiMI	CAYNNNNRTG	2 cut(s)	399, 645
SmlI	CTYRAG	2 cut(s)	234, 363
SmoI	CTYRAG	2 cut(s)	234, 363
SpeI	ACTAGT	1 cut(s)	574
SphI	GCATGC	1 cut(s)	478
SseBI	AGGCCT	1 cut(s)	928
SsiI	CCGC	7 cut(s)	24, 41, 550, 698, 913, 1003, 1105
SspI	AATATT	1 cut(s)	509
SspMI	CTAG	4 cut(s)	299, 575, 593, 671
StuI	AGGCCT	1 cut(s)	928
StyD4I	CCNGG	2 cut(s)	514, 1072
StyI	CCWWGG	1 cut(s)	763
TaaI	ACNGT	5 cut(s)	217, 253, 260, 688, 827
TaiI	ACGT	1 cut(s)	489
TaqI	TCGA	2 cut(s)	235, 626
TatI	WGTACW	1 cut(s)	822
TauI	GCSGC	1 cut(s)	1006
TfiI	GAWTC	1 cut(s)	919
Tru1I	TTAA	2 cut(s)	291, 651
Tru9I	TTAA	2 cut(s)	291, 651
TscAI	CASTG	1 cut(s)	531
TseFI	GTSAC	3 cut(s)	403, 860, 895
TseI	GCWGC	3 cut(s)	155, 173, 353
Tsp45I	GTSAC	3 cut(s)	403, 860, 895
TspDTI	ATGAA	3 cut(s)	17, 611, 986
TspGWI	ACGGA	1 cut(s)	671
TspRI	CASTG	1 cut(s)	531
VpaK11BI	GGWCC	1 cut(s)	1118
XbaI	TCTAGA	2 cut(s)	298, 670
XceI	RCATGY	3 cut(s)	478, 667, 868
XhoI	CTCGAG	1 cut(s)	234
XspI	CTAG	4 cut(s)	299, 575, 593, 671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.