FvH4_7g01080

protein phosphatase binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0015075
Physical Location & Seq
Reverse (-)
1499465 .. 1500205
741 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g01080.t1

Sequence Viewer

Length: 522 bp
ATGGTGGCTGTGACGATGACAACGTCGACAATGGCGAATACGGAGGAACCGATTCTGTCCAGGCTGGACCGCCTCGACATCATGCTTCGGCAGCTGGAGGAAATCAAGGGGTGTAATAATCCCATCCATCAATCCTCACACTCGGCCAAAAGCTCCTGCGAATCCACGCCGTCCAGTGGAACCATAACCAGCGATTATGCACAGGTGTCGTCAACGGCGTCGTCCGCCGACCACTTCTCTCCCAAGAGCCTCGAGAAGCACTGCCGTCCGATTCAGAACGTGATGATGGAGATGGGCGCCAAGGGGACGCTGATTGAGAGGCTGGATCATGTGGAGGAGCGTGTTTTAAAGCTGTGTATGCAGCTGGAGGAAGAACTGGAGGCCGCTGAGAGGAAGAGAGATGGAGATCGGTTCAAGGTTGAGGAAGAGGGGAATAAGGTCGTCGAGGAGAGGAGGACTACTGGTCACAAGAAGGGGTTCAAGCAGCTTGTAAAGCAGTGTGTTACCGGGAAAACAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

174

Amino Acids

19.38

Weight (kDa)

6.32

Isoelectric Point (pI)

50.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015075)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07985
fragaria_vesca FvH4_7g01080
malus_domestica MD07G1011000.v1.1
prunus_persica Prupe.2G013500_v2.0.a1
pyrus_communis pycom07g00910
rosa_chinensis RchiOBHm_Chr1g0316061
rosa_laevigata RLG00000030705
rosa_multiflora Rmu_sc0002014.1_g000005 Rmu_sc0002531.1_g000037
rosa_roxburghii Rroxscaffold_4G00331160
rosa_rugosa Rorug01G0008600
rosa_samantha Rh1AG018900 Rh1BG012400 Rh1CG016200 Rh1DG012600
rosa_wichuraiana Rw1G001210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 296
AccI GTMKAC 1 cut(s) 26
AciI CCGC 3 cut(s) 70, 225, 384
AclWI GGATC 1 cut(s) 333
AcoI YGGCCR 1 cut(s) 144
AcyI GRCGYC 2 cut(s) 218, 297
AfiI CCNNNNNNNGG 2 cut(s) 176, 390
AgsI TTSAA 2 cut(s) 415, 481
AhdI GACNNNNNGTC 1 cut(s) 462
AjnI CCWGG 1 cut(s) 59
AluBI AGCT 5 cut(s) 94, 153, 352, 364, 487
AluI AGCT 5 cut(s) 94, 153, 352, 364, 487
AlwI GGATC 1 cut(s) 333
Ama87I CYCGRG 1 cut(s) 251
AoxI GGCC 2 cut(s) 144, 381
ApeKI GCWGC 3 cut(s) 91, 361, 484
Asp700I GAANNNNTTC 2 cut(s) 51, 476
AspLEI GCGC 1 cut(s) 299
AspS9I GGNCC 1 cut(s) 67
AsuC2I CCSGG 1 cut(s) 508
AvaI CYCGRG 1 cut(s) 251
AvaII GGWCC 1 cut(s) 67
BanI GGYRCC 1 cut(s) 296
BbvI GCAGC 3 cut(s) 103, 373, 496
BccI CCATC 5 cut(s) 131, 135, 280, 286, 395
BceAI ACGGC 3 cut(s) 154, 231, 249
BcgI CGANNNNNNTGC 2 cut(s) 189, 223
BciT130I CCWGG 1 cut(s) 61
BcnI CCSGG 1 cut(s) 508
BfoI RGCGCY 1 cut(s) 300
BisI GCNGC 4 cut(s) 92, 362, 384, 485
BlsI GCNGC 4 cut(s) 93, 363, 385, 486
Bme1390I CCNGG 2 cut(s) 61, 508
Bme18I GGWCC 1 cut(s) 67
BmeRI GACNNNNNGTC 1 cut(s) 462
BmeT110I CYCGRG 1 cut(s) 251
BmgT120I GGNCC 1 cut(s) 67
BmiI GGNNCC 3 cut(s) 48, 181, 298
BmrFI CCNGG 2 cut(s) 61, 508
BpmI CTGGAG 3 cut(s) 116, 386, 398
BpuMI CCSGG 1 cut(s) 508
BsaBI GATNNNNATC 1 cut(s) 405
BsaHI GRCGYC 2 cut(s) 218, 297
BsaJI CCNNGG 1 cut(s) 300
Bsc4I CCNNNNNNNGG 2 cut(s) 176, 390
Bse1I ACTGG 3 cut(s) 174, 381, 466
Bse8I GATNNNNATC 1 cut(s) 405
BseBI CCWGG 1 cut(s) 61
BseDI CCNNGG 1 cut(s) 300
BseGI GGATG 1 cut(s) 123
BseJI GATNNNNATC 1 cut(s) 405
BseLI CCNNNNNNNGG 2 cut(s) 176, 390
BseMII CTCAG 1 cut(s) 378
BseNI ACTGG 3 cut(s) 174, 381, 466
BseRI GAGGAG 3 cut(s) 350, 461, 466
BseXI GCAGC 3 cut(s) 103, 373, 496
BshFI GGCC 2 cut(s) 146, 383
BshNI GGYRCC 1 cut(s) 296
BsiHKCI CYCGRG 1 cut(s) 251
BsiSI CCGG 1 cut(s) 507
BslFI GGGAC 1 cut(s) 319
BslI CCNNNNNNNGG 2 cut(s) 176, 390
BsmFI GGGAC 1 cut(s) 319
BsnI GGCC 2 cut(s) 146, 383
BsoBI CYCGRG 1 cut(s) 251
Bsp143I GATC 2 cut(s) 325, 406
BspACI CCGC 3 cut(s) 70, 225, 384
BspANI GGCC 2 cut(s) 146, 383
BspCNI CTCAG 1 cut(s) 379
BspLI GGNNCC 3 cut(s) 48, 181, 298
BspPI GGATC 1 cut(s) 333
BspT107I GGYRCC 1 cut(s) 296
BsrI ACTGG 3 cut(s) 174, 381, 466
BssECI CCNNGG 1 cut(s) 300
BssMI GATC 2 cut(s) 325, 406
BssNI GRCGYC 2 cut(s) 218, 297
BssT1I CCWWGG 1 cut(s) 300
Bst2UI CCWGG 1 cut(s) 61
Bst6I CTCTTC 2 cut(s) 389, 420
BstACI GRCGYC 2 cut(s) 218, 297
BstDEI CTNAG 1 cut(s) 387
BstF5I GGATG 1 cut(s) 123
BstH2I RGCGCY 1 cut(s) 300
BstHHI GCGC 1 cut(s) 299
BstKTI GATC 2 cut(s) 328, 409
BstMBI GATC 2 cut(s) 325, 406
BstMWI GCNNNNNNNGC 4 cut(s) 91, 224, 358, 493
BstNI CCWGG 1 cut(s) 61
BstSCI CCNGG 2 cut(s) 59, 506
BstV1I GCAGC 3 cut(s) 103, 373, 496
BsuRI GGCC 2 cut(s) 146, 383
BtsCI GGATG 1 cut(s) 123
BtsI GCAGTG 2 cut(s) 259, 503
BtsIMutI CAGTG 3 cut(s) 181, 259, 503
CfoI GCGC 1 cut(s) 299
Cfr13I GGNCC 1 cut(s) 67
CseI GACGC 2 cut(s) 207, 316
CviAII CATG 2 cut(s) 82, 329
DdeI CTNAG 1 cut(s) 387
DinI GGCGCC 1 cut(s) 298
DpnI GATC 2 cut(s) 327, 408
DpnII GATC 2 cut(s) 325, 406
DraI TTTAAA 1 cut(s) 348
DriI GACNNNNNGTC 1 cut(s) 462
EaeI YGGCCR 1 cut(s) 144
Eam1104I CTCTTC 2 cut(s) 389, 420
Eam1105I GACNNNNNGTC 1 cut(s) 462
EarI CTCTTC 2 cut(s) 389, 420
EciI GGCGGA 1 cut(s) 214
Eco130I CCWWGG 1 cut(s) 300
Eco47I GGWCC 1 cut(s) 67
Eco88I CYCGRG 1 cut(s) 251
EcoRII CCWGG 1 cut(s) 59
EcoT14I CCWWGG 1 cut(s) 300
EgeI GGCGCC 1 cut(s) 298
EheI GGCGCC 1 cut(s) 298
ErhI CCWWGG 1 cut(s) 300
FaeI CATG 2 cut(s) 85, 332
FaiI YATR 5 cut(s) 83, 185, 198, 330, 359
FaqI GGGAC 1 cut(s) 319
FatI CATG 2 cut(s) 81, 328
FblI GTMKAC 1 cut(s) 26
Fnu4HI GCNGC 4 cut(s) 92, 362, 384, 485
FokI GGATG 1 cut(s) 110
Fsp4HI GCNGC 4 cut(s) 92, 362, 384, 485
GlaI GCGC 1 cut(s) 298
GluI GCNGC 4 cut(s) 92, 362, 384, 485
GsuI CTGGAG 3 cut(s) 116, 386, 398
HaeII RGCGCY 1 cut(s) 300
HaeIII GGCC 2 cut(s) 146, 383
HapII CCGG 1 cut(s) 507
HgaI GACGC 2 cut(s) 207, 316
HhaI GCGC 1 cut(s) 299
Hin1I GRCGYC 2 cut(s) 218, 297
Hin1II CATG 2 cut(s) 85, 332
Hin6I GCGC 1 cut(s) 297
HinP1I GCGC 1 cut(s) 297
HincII GTYRAC 2 cut(s) 27, 213
HindII GTYRAC 2 cut(s) 27, 213
HinfI GANTC 3 cut(s) 52, 161, 271
HpaII CCGG 1 cut(s) 507
Hpy166II GTNNAC 2 cut(s) 27, 213
Hpy188I TCNGA 2 cut(s) 270, 276
Hpy188III TCNNGA 1 cut(s) 253
Hpy8I GTNNAC 2 cut(s) 27, 213
Hpy99I CGWCG 3 cut(s) 28, 223, 446
HpyAV CCTTC 1 cut(s) 466
HpyCH4IV ACGT 2 cut(s) 23, 279
HpyCH4V TGCA 2 cut(s) 200, 361
HpyF10VI GCNNNNNNNGC 4 cut(s) 91, 224, 358, 493
HpyF3I CTNAG 1 cut(s) 387
HpySE526I ACGT 2 cut(s) 23, 279
Hsp92I GRCGYC 2 cut(s) 218, 297
Hsp92II CATG 2 cut(s) 85, 332
HspAI GCGC 1 cut(s) 297
KasI GGCGCC 1 cut(s) 296
Kzo9I GATC 2 cut(s) 325, 406
LmnI GCTCC 2 cut(s) 158, 337
Lsp1109I GCAGC 3 cut(s) 103, 373, 496
MaeII ACGT 2 cut(s) 23, 279
MaeIII GTNAC 3 cut(s) 10, 464, 502
MalI GATC 2 cut(s) 327, 408
MboI GATC 2 cut(s) 325, 406
MboII GAAGA 3 cut(s) 383, 406, 437
MluCI AATT 1 cut(s) 517
Mly113I GGCGCC 1 cut(s) 297
MroXI GAANNNNTTC 2 cut(s) 51, 476
MseI TTAA 1 cut(s) 347
MspA1I CMGCKG 3 cut(s) 94, 364, 386
MspI CCGG 1 cut(s) 507
MspR9I CCNGG 2 cut(s) 61, 508
MvaI CCWGG 1 cut(s) 61
MwoI GCNNNNNNNGC 4 cut(s) 91, 224, 358, 493
NarI GGCGCC 1 cut(s) 297
NciI CCSGG 1 cut(s) 508
NdeII GATC 2 cut(s) 325, 406
NlaIII CATG 2 cut(s) 85, 332
NlaIV GGNNCC 3 cut(s) 48, 181, 298
NmeAIII GCCGAG 1 cut(s) 122
NmuCI GTSAC 2 cut(s) 10, 464
PaeR7I CTCGAG 1 cut(s) 251
PcsI WCGNNNNNNNCGW 4 cut(s) 20, 32, 47, 215
PdmI GAANNNNTTC 2 cut(s) 51, 476
PfeI GAWTC 3 cut(s) 52, 161, 271
PflFI GACNNNGTC 1 cut(s) 22
PkrI GCNGC 4 cut(s) 93, 363, 385, 486
PluTI GGCGCC 1 cut(s) 300
Psp6I CCWGG 1 cut(s) 59
PspGI CCWGG 1 cut(s) 59
PspN4I GGNNCC 3 cut(s) 48, 181, 298
PspPI GGNCC 1 cut(s) 67
PsyI GACNNNGTC 1 cut(s) 22
PvuII CAGCTG 2 cut(s) 94, 364
SalI GTCGAC 1 cut(s) 25
SaqAI TTAA 1 cut(s) 347
SatI GCNGC 4 cut(s) 92, 362, 384, 485
Sau3AI GATC 2 cut(s) 325, 406
Sau96I GGNCC 1 cut(s) 67
ScrFI CCNGG 2 cut(s) 61, 508
SfoI GGCGCC 1 cut(s) 298
Sfr274I CTCGAG 1 cut(s) 251
SinI GGWCC 1 cut(s) 67
SlaI CTCGAG 1 cut(s) 251
SmlI CTYRAG 1 cut(s) 251
SmoI CTYRAG 1 cut(s) 251
Sse9I AATT 1 cut(s) 517
SsiI CCGC 3 cut(s) 70, 225, 384
SspDI GGCGCC 1 cut(s) 296
StyD4I CCNGG 2 cut(s) 59, 506
StyI CCWWGG 1 cut(s) 300
TaiI ACGT 2 cut(s) 26, 282
TaqI TCGA 4 cut(s) 26, 75, 252, 444
TasI AATT 1 cut(s) 517
TauI GCSGC 1 cut(s) 386
TfiI GAWTC 3 cut(s) 52, 161, 271
Tru1I TTAA 1 cut(s) 347
Tru9I TTAA 1 cut(s) 347
TscAI CASTG 3 cut(s) 181, 266, 503
TseFI GTSAC 2 cut(s) 10, 464
TseI GCWGC 3 cut(s) 91, 361, 484
Tsp45I GTSAC 2 cut(s) 10, 464
TspGWI ACGGA 1 cut(s) 56
TspRI CASTG 3 cut(s) 181, 266, 503
Tth111I GACNNNGTC 1 cut(s) 22
VpaK11BI GGWCC 1 cut(s) 67
XhoI CTCGAG 1 cut(s) 251
XmiI GTMKAC 1 cut(s) 26
XmnI GAANNNNTTC 2 cut(s) 51, 476
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.