pycom07g00910

protein phosphatase binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0015075
Physical Location & Seq
Reverse (-)
777039 .. 777641
603 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g00910.1

Sequence Viewer

Length: 603 bp
ATGGTGGCAATGACGATGGCCAACACGACCGAGGAACCAATTTTGTTCAGGATGGACCGACTCGATACAATTCTGAGGCAGTTGGAGGAAATCCGCCGCTTGCAGTCGCAGTCGCATTCACATTCACATACTCGTACGCCCAAGAGTAGCTCGCTTACGTCCACACCCTCGAGGACGAGCGGGACCCTCACGAGCGAGGGAGGGAACTTGCCCTCATCCGCGGAGTTGATCTCTCCCGAGAGCCTAGAGAAGCACTGCCGTCCGATTGAGCACGTGATGATGGAGACCGACGCCAAGGGGTCGCTGATCGAGCGGCTGGATCACGTTGAGGACCGCGTGCTGAAGCTGTGCGTGCAGCTGGAGGAGGAGTTCATGGAGAGTAGTGCCGAAAAGAAGAGAGATGACGAGGCGGAGATGATCAAGAGGAGTGAGAAAGAGAGTGAGGAGATGATCAGGAGGAGTGAGAAAGAGGAGAAGATTGATACCAATGAGATTGAGAGGACTCAAATTGATGTGATTAAGAATAAGAAGAAGGGACTGAAGCAACTTGTTAAGCAGTATGTCATGGGAAAAGGAAAATCCAATAAATCAACTGATCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

201

Amino Acids

22.94

Weight (kDa)

5.95

Isoelectric Point (pI)

68.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015075)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07985
fragaria_vesca FvH4_7g01080
malus_domestica MD07G1011000.v1.1
prunus_persica Prupe.2G013500_v2.0.a1
pyrus_communis pycom07g00910
rosa_chinensis RchiOBHm_Chr1g0316061
rosa_laevigata RLG00000030705
rosa_multiflora Rmu_sc0002014.1_g000005 Rmu_sc0002531.1_g000037
rosa_roxburghii Rroxscaffold_4G00331160
rosa_rugosa Rorug01G0008600
rosa_samantha Rh1AG018900 Rh1BG012400 Rh1CG016200 Rh1DG012600
rosa_wichuraiana Rw1G001210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 169
AccBSI CCGCTC 2 cut(s) 180, 313
AccII CGCG 2 cut(s) 221, 336
AciI CCGC 8 cut(s) 94, 97, 180, 219, 221, 313, 334, 410
AclWI GGATC 1 cut(s) 327
AcoI YGGCCR 1 cut(s) 18
AcuI CTGAAG 2 cut(s) 362, 560
AcvI CACGTG 1 cut(s) 274
AcyI GRCGYC 1 cut(s) 291
AfaI GTAC 1 cut(s) 136
AloI GAACNNNNNNTCC 2 cut(s) 353, 385
AluBI AGCT 3 cut(s) 150, 346, 358
AluI AGCT 3 cut(s) 150, 346, 358
Alw21I GWGCWC 1 cut(s) 273
Alw26I GTCTC 1 cut(s) 278
AlwI GGATC 1 cut(s) 327
Ama87I CYCGRG 2 cut(s) 169, 236
AoxI GGCC 1 cut(s) 18
ApeKI GCWGC 1 cut(s) 355
AspS9I GGNCC 3 cut(s) 55, 183, 331
AvaI CYCGRG 2 cut(s) 169, 236
AvaII GGWCC 3 cut(s) 55, 183, 331
BalI TGGCCA 1 cut(s) 20
BauI CACGAG 1 cut(s) 190
BbrPI CACGTG 1 cut(s) 274
Bbv12I GWGCWC 1 cut(s) 273
BbvI GCAGC 1 cut(s) 367
BccI CCATC 3 cut(s) 10, 46, 274
BceAI ACGGC 1 cut(s) 243
BclI TGATCA 2 cut(s) 417, 450
BcoDI GTCTC 1 cut(s) 278
BfaI CTAG 1 cut(s) 245
BisI GCNGC 3 cut(s) 97, 314, 356
BlsI GCNGC 3 cut(s) 98, 315, 357
Bme18I GGWCC 3 cut(s) 55, 183, 331
BmeT110I CYCGRG 2 cut(s) 169, 236
BmgT120I GGNCC 3 cut(s) 55, 183, 331
BmiI GGNNCC 3 cut(s) 36, 184, 185
BplI GAGNNNNNCTC 2 cut(s) 215, 247
BpmI CTGGAG 1 cut(s) 380
BsaAI YACGTR 1 cut(s) 274
BsaHI GRCGYC 1 cut(s) 291
BsaI GGTCTC 1 cut(s) 278
BsaJI CCNNGG 3 cut(s) 30, 219, 294
BsaXI ACNNNNNCTCC 2 cut(s) 353, 383
Bse3DI GCAATG 1 cut(s) 15
BseDI CCNNGG 3 cut(s) 30, 219, 294
BseGI GGATG 2 cut(s) 57, 215
BseMI GCAATG 1 cut(s) 15
BseMII CTCAG 1 cut(s) 65
BseRI GAGGAG 6 cut(s) 377, 380, 439, 458, 472, 485
BseXI GCAGC 1 cut(s) 367
BsgI GTGCAG 1 cut(s) 374
Bsh1236I CGCG 2 cut(s) 221, 336
Bsh1285I CGRYCG 1 cut(s) 30
BshFI GGCC 1 cut(s) 20
BsiEI CGRYCG 1 cut(s) 30
BsiHKAI GWGCWC 1 cut(s) 273
BsiHKCI CYCGRG 2 cut(s) 169, 236
BsiWI CGTACG 1 cut(s) 134
BslFI GGGAC 2 cut(s) 196, 549
BsmAI GTCTC 1 cut(s) 278
BsmFI GGGAC 2 cut(s) 196, 549
BsmI GAATGC 1 cut(s) 115
BsnI GGCC 1 cut(s) 20
Bso31I GGTCTC 1 cut(s) 278
BsoBI CYCGRG 2 cut(s) 169, 236
Bsp1286I GDGCHC 1 cut(s) 273
Bsp143I GATC 6 cut(s) 228, 306, 319, 417, 450, 595
BspACI CCGC 8 cut(s) 94, 97, 180, 219, 221, 313, 334, 410
BspANI GGCC 1 cut(s) 20
BspCNI CTCAG 1 cut(s) 66
BspFNI CGCG 2 cut(s) 221, 336
BspLI GGNNCC 3 cut(s) 36, 184, 185
BspPI GGATC 1 cut(s) 327
BspTNI GGTCTC 1 cut(s) 278
BsrBI CCGCTC 2 cut(s) 180, 313
BsrDI GCAATG 1 cut(s) 15
BssECI CCNNGG 3 cut(s) 30, 219, 294
BssMI GATC 6 cut(s) 228, 306, 319, 417, 450, 595
BssNI GRCGYC 1 cut(s) 291
BssSI CACGAG 1 cut(s) 190
BssT1I CCWWGG 1 cut(s) 294
Bst2BI CACGAG 1 cut(s) 190
Bst6I CTCTTC 1 cut(s) 389
BstACI GRCGYC 1 cut(s) 291
BstBAI YACGTR 1 cut(s) 274
BstC8I GCNNGC 4 cut(s) 101, 152, 338, 353
BstDEI CTNAG 1 cut(s) 74
BstDSI CCRYGG 1 cut(s) 219
BstF5I GGATG 2 cut(s) 57, 215
BstFNI CGCG 2 cut(s) 221, 336
BstKTI GATC 6 cut(s) 231, 309, 322, 420, 453, 598
BstMAI GTCTC 1 cut(s) 278
BstMBI GATC 6 cut(s) 228, 306, 319, 417, 450, 595
BstMCI CGRYCG 1 cut(s) 30
BstMWI GCNNNNNNNGC 2 cut(s) 310, 352
BstUI CGCG 2 cut(s) 221, 336
BstV1I GCAGC 1 cut(s) 367
BsuRI GGCC 1 cut(s) 20
BtgI CCRYGG 1 cut(s) 219
BtsCI GGATG 2 cut(s) 57, 215
BtsI GCAGTG 1 cut(s) 253
BtsIMutI CAGTG 1 cut(s) 253
Cac8I GCNNGC 4 cut(s) 101, 152, 338, 353
Cfr13I GGNCC 3 cut(s) 55, 183, 331
Cfr42I CCGCGG 1 cut(s) 222
CseI GACGC 1 cut(s) 299
Csp6I GTAC 1 cut(s) 135
CviAII CATG 2 cut(s) 373, 565
CviJI RGCY 6 cut(s) 20, 150, 243, 316, 346, 358
CviKI_1 RGCY 6 cut(s) 20, 150, 243, 316, 346, 358
CviQI GTAC 1 cut(s) 135
DdeI CTNAG 1 cut(s) 74
DpnI GATC 6 cut(s) 230, 308, 321, 419, 452, 597
DpnII GATC 6 cut(s) 228, 306, 319, 417, 450, 595
EaeI YGGCCR 1 cut(s) 18
Eam1104I CTCTTC 1 cut(s) 389
EarI CTCTTC 1 cut(s) 389
EciI GGCGGA 2 cut(s) 83, 425
Eco130I CCWWGG 1 cut(s) 294
Eco31I GGTCTC 1 cut(s) 278
Eco47I GGWCC 3 cut(s) 55, 183, 331
Eco57I CTGAAG 2 cut(s) 362, 560
Eco72I CACGTG 1 cut(s) 274
Eco88I CYCGRG 2 cut(s) 169, 236
EcoO109I RGGNCCY 1 cut(s) 183
EcoT14I CCWWGG 1 cut(s) 294
ErhI CCWWGG 1 cut(s) 294
FaeI CATG 2 cut(s) 376, 568
FaiI YATR 4 cut(s) 129, 374, 561, 566
FaqI GGGAC 2 cut(s) 196, 549
FatI CATG 2 cut(s) 372, 564
FauI CCCGC 1 cut(s) 173
FbaI TGATCA 2 cut(s) 417, 450
Fnu4HI GCNGC 3 cut(s) 97, 314, 356
FokI GGATG 2 cut(s) 64, 202
Fsp4HI GCNGC 3 cut(s) 97, 314, 356
FspBI CTAG 1 cut(s) 245
GluI GCNGC 3 cut(s) 97, 314, 356
GsuI CTGGAG 1 cut(s) 380
HaeIII GGCC 1 cut(s) 20
HgaI GACGC 1 cut(s) 299
Hin1I GRCGYC 1 cut(s) 291
Hin1II CATG 2 cut(s) 376, 568
HinfI GANTC 2 cut(s) 60, 502
Hpy166II GTNNAC 1 cut(s) 162
Hpy188I TCNGA 2 cut(s) 75, 264
Hpy188III TCNNGA 5 cut(s) 49, 190, 236, 421, 454
Hpy8I GTNNAC 1 cut(s) 162
Hpy99I CGWCG 1 cut(s) 293
HpyAV CCTTC 1 cut(s) 526
HpyCH4IV ACGT 3 cut(s) 158, 273, 324
HpyCH4V TGCA 2 cut(s) 103, 355
HpyF10VI GCNNNNNNNGC 2 cut(s) 310, 352
HpyF3I CTNAG 1 cut(s) 74
HpySE526I ACGT 3 cut(s) 158, 273, 324
Hsp92I GRCGYC 1 cut(s) 291
Hsp92II CATG 2 cut(s) 376, 568
KflI GGGWCCC 1 cut(s) 183
Ksp22I TGATCA 2 cut(s) 417, 450
KspI CCGCGG 1 cut(s) 222
Kzo9I GATC 6 cut(s) 228, 306, 319, 417, 450, 595
LpnPI CCDG 4 cut(s) 34, 302, 344, 439
Lsp1109I GCAGC 1 cut(s) 367
MaeI CTAG 1 cut(s) 245
MaeII ACGT 3 cut(s) 158, 273, 324
MalI GATC 6 cut(s) 230, 308, 321, 419, 452, 597
MbiI CCGCTC 2 cut(s) 180, 313
MboI GATC 6 cut(s) 228, 306, 319, 417, 450, 595
MboII GAAGA 3 cut(s) 406, 487, 541
MhlI GDGCHC 1 cut(s) 273
MlsI TGGCCA 1 cut(s) 20
MluCI AATT 3 cut(s) 39, 69, 507
MluNI TGGCCA 1 cut(s) 20
MlyI GAGTC 2 cut(s) 54, 496
MmeI TCCRAC 1 cut(s) 63
Mox20I TGGCCA 1 cut(s) 20
MscI TGGCCA 1 cut(s) 20
MseI TTAA 2 cut(s) 519, 552
Msp20I TGGCCA 1 cut(s) 20
MspA1I CMGCKG 2 cut(s) 221, 358
Mva1269I GAATGC 1 cut(s) 115
MvnI CGCG 2 cut(s) 221, 336
MwoI GCNNNNNNNGC 2 cut(s) 310, 352
NdeII GATC 6 cut(s) 228, 306, 319, 417, 450, 595
NlaIII CATG 2 cut(s) 376, 568
NlaIV GGNNCC 3 cut(s) 36, 184, 185
PaeR7I CTCGAG 1 cut(s) 169
PctI GAATGC 1 cut(s) 115
Pfl23II CGTACG 1 cut(s) 134
PkrI GCNGC 3 cut(s) 98, 315, 357
PleI GAGTC 2 cut(s) 54, 496
PmaCI CACGTG 1 cut(s) 274
PmlI CACGTG 1 cut(s) 274
PpsI GAGTC 2 cut(s) 54, 496
Ppu21I YACGTR 1 cut(s) 274
PpuMI RGGWCCY 1 cut(s) 183
Psp5II RGGWCCY 1 cut(s) 183
PspCI CACGTG 1 cut(s) 274
PspLI CGTACG 1 cut(s) 134
PspN4I GGNNCC 3 cut(s) 36, 184, 185
PspPI GGNCC 3 cut(s) 55, 183, 331
PspPPI RGGWCCY 1 cut(s) 183
PspXI VCTCGAGB 1 cut(s) 169
PvuII CAGCTG 1 cut(s) 358
RsaI GTAC 1 cut(s) 136
RsaNI GTAC 1 cut(s) 135
SacII CCGCGG 1 cut(s) 222
SaqAI TTAA 2 cut(s) 519, 552
SatI GCNGC 3 cut(s) 97, 314, 356
Sau3AI GATC 6 cut(s) 228, 306, 319, 417, 450, 595
Sau96I GGNCC 3 cut(s) 55, 183, 331
SchI GAGTC 2 cut(s) 54, 496
SduI GDGCHC 1 cut(s) 273
SetI ASST 6 cut(s) 152, 161, 276, 327, 348, 360
Sfr274I CTCGAG 1 cut(s) 169
Sfr303I CCGCGG 1 cut(s) 222
SgrBI CCGCGG 1 cut(s) 222
SinI GGWCC 3 cut(s) 55, 183, 331
SlaI CTCGAG 1 cut(s) 169
SmlI CTYRAG 1 cut(s) 169
SmoI CTYRAG 1 cut(s) 169
Sse9I AATT 3 cut(s) 39, 69, 507
SsiI CCGC 8 cut(s) 94, 97, 180, 219, 221, 313, 334, 410
SspMI CTAG 1 cut(s) 245
StyI CCWWGG 1 cut(s) 294
TaiI ACGT 3 cut(s) 161, 276, 327
TaqI TCGA 3 cut(s) 63, 170, 309
TaqII GACCGA 3 cut(s) 44, 72, 302
TasI AATT 3 cut(s) 39, 69, 507
TauI GCSGC 2 cut(s) 99, 316
Tru1I TTAA 2 cut(s) 519, 552
Tru9I TTAA 2 cut(s) 519, 552
TscAI CASTG 1 cut(s) 260
TseI GCWGC 1 cut(s) 355
TspDTI ATGAA 1 cut(s) 361
TspRI CASTG 1 cut(s) 260
VpaK11BI GGWCC 3 cut(s) 55, 183, 331
XhoI CTCGAG 1 cut(s) 169
XspI CTAG 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.