FvH4_7g01951
BZIP Family

basic region leucin zipper

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
2331178 .. 2336586
5409 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g01951.t1

Sequence Viewer

Length: 1323 bp
ATGGATGATGGGGAAGTAGAGACCTTAGACCATGCTGTAATTCCAAAATCCAATTCCTCTGGTAATTTCCATACTCCAACTTCTATAGATACATTACGGACATGCCTTCACACTCACACATGCAACCTACCTGGCCCTGATGCTGCACATACACACACTTGCTATCACACACATACCCAAGTTCTTCCGTCGGAGGAAAATGATGGTGATCACAGTAAAGAGGATTTGGTATTGAAACCAAAAAGAAGAAGGCCTTCAGGAAATAGAGAAGCAGTTCGGAAGTACAGAGAGAAAAAGAAGGCACACACAGCTTATTTAGAAGAGGAAGTTAAGAAATTGCAGCTGTTGAACCAGCAACTTGTTAGGAAATTACAGGGGCAGGCAAGTCTTGAAGCAGAATTTTTAAGGCTTAGAAACCTATTGCTGGACTTTAGAGGAAAAATTGATAGTGAGTTGGGTGCTTTTCCATTTGAAAAACAGTATTATAAACCTGGTGTTATTTCCAAGGAAGGGGATTGTGAACTGCAATCTAATGTTGGGGAAACTGGCATTCGTTGTCAAATTGATTTGCCATGCTTCTGTCCACCTGCTGTGGGGTTATCATTAGAGGCCGGAATTGAAGCGAGTGAGAAAACAATGGCGTCCTTTGGAGGAAATTGTCAGTCCCCGGTAATTGAATGCCGAGATCATCCAAAGGTGATGGCAAGTGCTGAAGTTCTAAAACTCGGTCAACTCGGCCGAGTACTCGGTACTCGGCTAGTCACCGTGGCGATTTTGGCCTACTCAGTGCCTCTAGTCGGCCAGCAGAAAATCGGCCGAAGCTTGCTGAAGCAGAGGAGCCCTGGAGAGGCATCCTCACTACTGTGTCATAGGGCTTCTTCCTTATCCTTGTTTCCATCTCTGAAATGTGGGACAATAAGGCTTTCTGTTTGCAAACAAGCACATATGGACGTCAACCACCGACTTGGTTTGCTACAAAGACGCCCATATTTGGAAGCGGTAGGTGATCTTGAGCAAGAATGCATGAAGTTGATACTTGTGTGTAAGAACCTCATTGACATCAGAGACATCACCATTTTCTTTGCTCTTGAAGCCAATGAACTAGGTCAGAAAACCAAGCCCAAAGACTTGAAGCCCTATAGGGCAGCCGCCCAAGGAAGGTTTTCCAGGCTCACAAAACTGGCTCGGACCAGTCCACCGGGTGCCGCACACTATTGTCGTACGCCCAGTCTTGTTGAGCTCCTAGCGACCCACGCAGCAACGACTTGCTCACACCGAGTGCCCAAAGTGAACATTTGGTGCATTGTTGGAGTGAAGCAATAA

Protein Analysis

441

Amino Acids

48.73

Weight (kDa)

8.99

Isoelectric Point (pI)

41.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_2 PF07716 81 - 133 7.4e-12 Basic region leucine zipper
bZIP_1 PF00170 81 - 126 2.2e-06 bZIP transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 486
AarI CACCTGC 1 cut(s) 595
AatII GACGTC 1 cut(s) 954
Acc36I ACCTGC 1 cut(s) 595
AccB1I GGYRCC 1 cut(s) 1202
AciI CCGC 3 cut(s) 998, 1149, 1206
AcoI YGGCCR 3 cut(s) 736, 799, 814
AcsI RAATTY 1 cut(s) 398
AcuI CTGAAG 3 cut(s) 240, 732, 848
AcyI GRCGYC 3 cut(s) 641, 951, 982
AdeI CACNNNGTG 2 cut(s) 1202, 1279
AfaI GTAC 4 cut(s) 284, 744, 751, 1222
AfiI CCNNNNNNNGG 7 cut(s) 424, 510, 593, 797, 847, 991, 1158
AgsI TTSAA 8 cut(s) 235, 349, 392, 473, 620, 677, 1091, 1132
AjnI CCWGG 4 cut(s) 130, 490, 841, 1166
AjuI GAANNNNNNNTTGG 2 cut(s) 37, 69
AleI CACNNNNGTG 1 cut(s) 862
AluBI AGCT 4 cut(s) 311, 343, 822, 1240
AluI AGCT 4 cut(s) 311, 343, 822, 1240
Alw21I GWGCWC 1 cut(s) 1242
Alw26I GTCTC 2 cut(s) 14, 1059
AoxI GGCC 7 cut(s) 133, 251, 609, 736, 777, 799, 814
ApeKI GCWGC 4 cut(s) 143, 340, 1145, 1256
ApoI RAATTY 1 cut(s) 398
Asp700I GAANNNNTTC 3 cut(s) 253, 273, 1162
AspS9I GGNCC 2 cut(s) 134, 1188
AsuC2I CCSGG 2 cut(s) 668, 1200
AsuHPI GGTGA 5 cut(s) 218, 709, 754, 1016, 1063
AvaII GGWCC 1 cut(s) 1188
BaeGI GKGCMC 1 cut(s) 1284
BaeI ACNNNNGTAYC 2 cut(s) 1025, 1058
BanI GGYRCC 1 cut(s) 1202
BanII GRGCYC 2 cut(s) 842, 1242
Bbv12I GWGCWC 1 cut(s) 1242
BbvI GCAGC 4 cut(s) 130, 352, 1157, 1268
BccI CCATC 4 cut(s) 2, 197, 694, 904
BciT130I CCWGG 4 cut(s) 132, 492, 843, 1168
BclI TGATCA 1 cut(s) 208
BcnI CCSGG 2 cut(s) 668, 1200
BcoDI GTCTC 2 cut(s) 14, 1059
BfaI CTAG 4 cut(s) 758, 794, 1103, 1244
BfmI CTRYAG 2 cut(s) 84, 1138
BfuAI ACCTGC 1 cut(s) 595
BisI GCNGC 6 cut(s) 144, 341, 1146, 1149, 1206, 1257
BlsI GCNGC 6 cut(s) 145, 342, 1147, 1150, 1207, 1258
BmcAI AGTACT 1 cut(s) 744
Bme1390I CCNGG 6 cut(s) 132, 492, 668, 843, 1168, 1200
Bme18I GGWCC 1 cut(s) 1188
BmgT120I GGNCC 2 cut(s) 134, 1188
BmiI GGNNCC 2 cut(s) 839, 1204
BmrFI CCNGG 6 cut(s) 132, 492, 668, 843, 1168, 1200
BmrI ACTGGG 1 cut(s) 1221
BmsI GCATC 2 cut(s) 130, 860
BmuI ACTGGG 1 cut(s) 1221
BplI GAGNNNNNCTC 2 cut(s) 839, 871
BpmI CTGGAG 1 cut(s) 864
BpuEI CTTGAG 1 cut(s) 1031
BpuMI CCSGG 2 cut(s) 668, 1200
BsaBI GATNNNNATC 1 cut(s) 207
BsaHI GRCGYC 3 cut(s) 641, 951, 982
BsaI GGTCTC 1 cut(s) 14
BsaJI CCNNGG 5 cut(s) 504, 666, 765, 841, 1153
Bsc4I CCNNNNNNNGG 7 cut(s) 424, 510, 593, 797, 847, 991, 1158
Bse1I ACTGG 4 cut(s) 550, 1185, 1191, 1227
Bse8I GATNNNNATC 1 cut(s) 207
BseBI CCWGG 4 cut(s) 132, 492, 843, 1168
BseDI CCNNGG 5 cut(s) 504, 666, 765, 841, 1153
BseGI GGATG 3 cut(s) 10, 688, 851
BseJI GATNNNNATC 1 cut(s) 207
BseLI CCNNNNNNNGG 7 cut(s) 424, 510, 593, 797, 847, 991, 1158
BseMII CTCAG 1 cut(s) 798
BseNI ACTGG 4 cut(s) 550, 1185, 1191, 1227
BseRI GAGGAG 1 cut(s) 850
BseSI GKGCMC 1 cut(s) 1284
BseX3I CGGCCG 2 cut(s) 736, 814
BseXI GCAGC 4 cut(s) 130, 352, 1157, 1268
BsgI GTGCAG 1 cut(s) 129
Bsh1285I CGRYCG 2 cut(s) 739, 817
BshFI GGCC 7 cut(s) 135, 253, 611, 738, 779, 801, 816
BshNI GGYRCC 1 cut(s) 1202
BsiEI CGRYCG 2 cut(s) 739, 817
BsiHKAI GWGCWC 1 cut(s) 1242
BsiSI CCGG 3 cut(s) 612, 668, 1199
BsiWI CGTACG 1 cut(s) 1220
BslFI GGGAC 2 cut(s) 649, 925
BslI CCNNNNNNNGG 7 cut(s) 424, 510, 593, 797, 847, 991, 1158
BsmAI GTCTC 2 cut(s) 14, 1059
BsmFI GGGAC 2 cut(s) 649, 925
BsmI GAATGC 3 cut(s) 549, 683, 1025
BsnI GGCC 7 cut(s) 135, 253, 611, 738, 779, 801, 816
Bso31I GGTCTC 1 cut(s) 14
Bsp1286I GDGCHC 3 cut(s) 842, 1242, 1284
Bsp143I GATC 3 cut(s) 208, 685, 1006
BspACI CCGC 3 cut(s) 998, 1149, 1206
BspANI GGCC 7 cut(s) 135, 253, 611, 738, 779, 801, 816
BspCNI CTCAG 1 cut(s) 797
BspLI GGNNCC 2 cut(s) 839, 1204
BspMI ACCTGC 1 cut(s) 595
BspT107I GGYRCC 1 cut(s) 1202
BspTNI GGTCTC 1 cut(s) 14
BsrI ACTGG 4 cut(s) 550, 1185, 1191, 1227
BssECI CCNNGG 5 cut(s) 504, 666, 765, 841, 1153
BssMI GATC 3 cut(s) 208, 685, 1006
BssNI GRCGYC 3 cut(s) 641, 951, 982
BssT1I CCWWGG 2 cut(s) 504, 1153
Bst2UI CCWGG 4 cut(s) 132, 492, 843, 1168
Bst4CI ACNGT 4 cut(s) 215, 480, 766, 864
Bst6I CTCTTC 1 cut(s) 315
BstACI GRCGYC 3 cut(s) 641, 951, 982
BstC8I GCNNGC 3 cut(s) 381, 803, 824
BstDEI CTNAG 3 cut(s) 25, 410, 784
BstDSI CCRYGG 1 cut(s) 765
BstF5I GGATG 3 cut(s) 10, 688, 851
BstKTI GATC 3 cut(s) 211, 688, 1009
BstMAI GTCTC 2 cut(s) 14, 1059
BstMBI GATC 3 cut(s) 208, 685, 1006
BstMCI CGRYCG 2 cut(s) 739, 817
BstMWI GCNNNNNNNGC 4 cut(s) 308, 776, 1091, 1253
BstNI CCWGG 4 cut(s) 132, 492, 843, 1168
BstNSI RCATGY 2 cut(s) 105, 123
BstSCI CCNGG 6 cut(s) 130, 490, 666, 841, 1166, 1198
BstSFI CTRYAG 2 cut(s) 84, 1138
BstSLI GKGCMC 1 cut(s) 1284
BstV1I GCAGC 4 cut(s) 130, 352, 1157, 1268
BstXI CCANNNNNNTGG 1 cut(s) 965
BstZI CGGCCG 2 cut(s) 736, 814
BsuRI GGCC 7 cut(s) 135, 253, 611, 738, 779, 801, 816
BtgI CCRYGG 1 cut(s) 765
BtsCI GGATG 3 cut(s) 10, 688, 851
BtsIMutI CAGTG 1 cut(s) 792
BveI ACCTGC 1 cut(s) 595
Cac8I GCNNGC 3 cut(s) 381, 803, 824
Cfr13I GGNCC 2 cut(s) 134, 1188
CseI GACGC 2 cut(s) 630, 990
CsiI ACCWGGT 1 cut(s) 490
Csp6I GTAC 4 cut(s) 283, 743, 750, 1221
CviAII CATG 5 cut(s) 32, 102, 120, 573, 1024
CviQI GTAC 4 cut(s) 283, 743, 750, 1221
DdeI CTNAG 3 cut(s) 25, 410, 784
DpnI GATC 3 cut(s) 210, 687, 1008
DpnII GATC 3 cut(s) 208, 685, 1006
DraIII CACNNNGTG 2 cut(s) 1202, 1279
EaeI YGGCCR 3 cut(s) 736, 799, 814
EagI CGGCCG 2 cut(s) 736, 814
Eam1104I CTCTTC 1 cut(s) 315
EarI CTCTTC 1 cut(s) 315
Ecl136II GAGCTC 1 cut(s) 1240
EclXI CGGCCG 2 cut(s) 736, 814
Eco130I CCWWGG 2 cut(s) 504, 1153
Eco147I AGGCCT 1 cut(s) 253
Eco24I GRGCYC 2 cut(s) 842, 1242
Eco31I GGTCTC 1 cut(s) 14
Eco47I GGWCC 1 cut(s) 1188
Eco52I CGGCCG 2 cut(s) 736, 814
Eco53kI GAGCTC 1 cut(s) 1240
Eco57I CTGAAG 3 cut(s) 240, 732, 848
EcoICRI GAGCTC 1 cut(s) 1240
EcoRII CCWGG 4 cut(s) 130, 490, 841, 1166
EcoT14I CCWWGG 2 cut(s) 504, 1153
EcoT22I ATGCAT 1 cut(s) 1025
EcoT38I GRGCYC 2 cut(s) 842, 1242
ErhI CCWWGG 2 cut(s) 504, 1153
FaeI CATG 5 cut(s) 35, 105, 123, 576, 1027
FalI AAGNNNNNCTT 2 cut(s) 238, 270
FaqI GGGAC 2 cut(s) 649, 925
FatI CATG 5 cut(s) 31, 101, 119, 572, 1023
FauNDI CATATG 1 cut(s) 945
FbaI TGATCA 1 cut(s) 208
Fnu4HI GCNGC 6 cut(s) 144, 341, 1146, 1149, 1206, 1257
FokI GGATG 3 cut(s) 17, 675, 838
FriOI GRGCYC 2 cut(s) 842, 1242
Fsp4HI GCNGC 6 cut(s) 144, 341, 1146, 1149, 1206, 1257
FspBI CTAG 4 cut(s) 758, 794, 1103, 1244
GluI GCNGC 6 cut(s) 144, 341, 1146, 1149, 1206, 1257
GsuI CTGGAG 1 cut(s) 864
HaeIII GGCC 7 cut(s) 135, 253, 611, 738, 779, 801, 816
HapII CCGG 3 cut(s) 612, 668, 1199
HgaI GACGC 2 cut(s) 630, 990
Hin1I GRCGYC 3 cut(s) 641, 951, 982
Hin1II CATG 5 cut(s) 35, 105, 123, 576, 1027
HincII GTYRAC 2 cut(s) 731, 955
HindII GTYRAC 2 cut(s) 731, 955
HindIII AAGCTT 1 cut(s) 820
HpaII CCGG 3 cut(s) 612, 668, 1199
HphI GGTGA 5 cut(s) 218, 709, 754, 1016, 1063
Hpy166II GTNNAC 6 cut(s) 521, 584, 731, 955, 1196, 1291
Hpy188I TCNGA 6 cut(s) 193, 279, 903, 1064, 1110, 1188
Hpy188III TCNNGA 4 cut(s) 258, 389, 1010, 1088
Hpy8I GTNNAC 6 cut(s) 521, 584, 731, 955, 1196, 1291
Hpy99I CGWCG 1 cut(s) 193
HpyAV CCTTC 6 cut(s) 116, 243, 264, 292, 503, 1152
HpyCH4III ACNGT 4 cut(s) 215, 480, 766, 864
HpyCH4IV ACGT 1 cut(s) 951
HpyCH4V TGCA 7 cut(s) 123, 146, 340, 526, 933, 1023, 1302
HpyF10VI GCNNNNNNNGC 4 cut(s) 308, 776, 1091, 1253
HpyF3I CTNAG 3 cut(s) 25, 410, 784
HpySE526I ACGT 1 cut(s) 951
Hsp92I GRCGYC 3 cut(s) 641, 951, 982
Hsp92II CATG 5 cut(s) 35, 105, 123, 576, 1027
Ksp22I TGATCA 1 cut(s) 208
Kzo9I GATC 3 cut(s) 208, 685, 1006
LmnI GCTCC 2 cut(s) 837, 1245
Lsp1109I GCAGC 4 cut(s) 130, 352, 1157, 1268
LweI GCATC 2 cut(s) 130, 860
MabI ACCWGGT 1 cut(s) 490
MaeI CTAG 4 cut(s) 758, 794, 1103, 1244
MaeII ACGT 1 cut(s) 951
MaeIII GTNAC 1 cut(s) 760
MalI GATC 3 cut(s) 210, 687, 1008
MboI GATC 3 cut(s) 208, 685, 1006
MboII GAAGA 4 cut(s) 176, 258, 332, 870
MhlI GDGCHC 3 cut(s) 842, 1242, 1284
MmeI TCCRAC 3 cut(s) 101, 171, 1288
Mph1103I ATGCAT 1 cut(s) 1025
MroXI GAANNNNTTC 3 cut(s) 253, 273, 1162
MseI TTAA 2 cut(s) 330, 404
MslI CAYNNNNRTG 1 cut(s) 862
MspA1I CMGCKG 1 cut(s) 343
MspI CCGG 3 cut(s) 612, 668, 1199
MspR9I CCNGG 6 cut(s) 132, 492, 668, 843, 1168, 1200
Mva1269I GAATGC 3 cut(s) 549, 683, 1025
MvaI CCWGG 4 cut(s) 132, 492, 843, 1168
MwoI GCNNNNNNNGC 4 cut(s) 308, 776, 1091, 1253
NciI CCSGG 2 cut(s) 668, 1200
NdeI CATATG 1 cut(s) 945
NdeII GATC 3 cut(s) 208, 685, 1006
NlaIII CATG 5 cut(s) 35, 105, 123, 576, 1027
NlaIV GGNNCC 2 cut(s) 839, 1204
NmeAIII GCCGAG 4 cut(s) 707, 714, 733, 764
NmuCI GTSAC 1 cut(s) 760
NsiI ATGCAT 1 cut(s) 1025
NspI RCATGY 2 cut(s) 105, 123
OliI CACNNNNGTG 1 cut(s) 862
PaqCI CACCTGC 1 cut(s) 595
PceI AGGCCT 1 cut(s) 253
PctI GAATGC 3 cut(s) 549, 683, 1025
PdmI GAANNNNTTC 3 cut(s) 253, 273, 1162
Pfl23II CGTACG 1 cut(s) 1220
PkrI GCNGC 6 cut(s) 145, 342, 1147, 1150, 1207, 1258
PsiI TTATAA 1 cut(s) 486
Psp124BI GAGCTC 1 cut(s) 1242
Psp6I CCWGG 4 cut(s) 130, 490, 841, 1166
PspGI CCWGG 4 cut(s) 130, 490, 841, 1166
PspLI CGTACG 1 cut(s) 1220
PspN4I GGNNCC 2 cut(s) 839, 1204
PspPI GGNCC 2 cut(s) 134, 1188
PvuII CAGCTG 1 cut(s) 343
RsaI GTAC 4 cut(s) 284, 744, 751, 1222
RsaNI GTAC 4 cut(s) 283, 743, 750, 1221
RseI CAYNNNNRTG 1 cut(s) 862
SacI GAGCTC 1 cut(s) 1242
SaqAI TTAA 2 cut(s) 330, 404
SatI GCNGC 6 cut(s) 144, 341, 1146, 1149, 1206, 1257
Sau3AI GATC 3 cut(s) 208, 685, 1006
Sau96I GGNCC 2 cut(s) 134, 1188
ScaI AGTACT 1 cut(s) 744
ScrFI CCNGG 6 cut(s) 132, 492, 668, 843, 1168, 1200
SduI GDGCHC 3 cut(s) 842, 1242, 1284
SexAI ACCWGGT 1 cut(s) 490
SfaNI GCATC 2 cut(s) 130, 860
SfcI CTRYAG 2 cut(s) 84, 1138
SinI GGWCC 1 cut(s) 1188
SmiMI CAYNNNNRTG 1 cut(s) 862
SmlI CTYRAG 1 cut(s) 1010
SmoI CTYRAG 1 cut(s) 1010
SseBI AGGCCT 1 cut(s) 253
SsiI CCGC 3 cut(s) 998, 1149, 1206
SspMI CTAG 4 cut(s) 758, 794, 1103, 1244
SstI GAGCTC 1 cut(s) 1242
StuI AGGCCT 1 cut(s) 253
StyD4I CCNGG 6 cut(s) 130, 490, 666, 841, 1166, 1198
StyI CCWWGG 2 cut(s) 504, 1153
TaaI ACNGT 4 cut(s) 215, 480, 766, 864
TaiI ACGT 1 cut(s) 954
TaqII GACCGA 1 cut(s) 716
TatI WGTACW 2 cut(s) 282, 742
TauI GCSGC 2 cut(s) 1151, 1208
Tru1I TTAA 2 cut(s) 330, 404
Tru9I TTAA 2 cut(s) 330, 404
TscAI CASTG 1 cut(s) 792
TseFI GTSAC 1 cut(s) 760
TseI GCWGC 4 cut(s) 143, 340, 1145, 1256
Tsp45I GTSAC 1 cut(s) 760
TspDTI ATGAA 2 cut(s) 1040, 1113
TspGWI ACGGA 2 cut(s) 112, 177
TspRI CASTG 1 cut(s) 792
VpaK11BI GGWCC 1 cut(s) 1188
XapI RAATTY 1 cut(s) 398
XceI RCATGY 2 cut(s) 105, 123
XmnI GAANNNNTTC 3 cut(s) 253, 273, 1162
XspI CTAG 4 cut(s) 758, 794, 1103, 1244
ZraI GACGTC 1 cut(s) 952
ZrmI AGTACT 1 cut(s) 744
Zsp2I ATGCAT 1 cut(s) 1025
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.