basic region leucin zipper
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G51960 AT3G51960 AT3G51960 |
| fragaria_vesca | FvH4_7g01951 |
| malus_domestica | MD02G1298400.v1.1 MD07G1025300.v1.1 |
| prunus_persica | Prupe.2G025800_v2.0.a1 Prupe.2G025800_v2.0.a1 Prupe.2G025800_v2.0.a1 |
| pyrus_communis | pycom02g25130 pycom07g01960 |
| rosa_chinensis | RchiOBHm_Chr1g0318951 |
| rosa_laevigata | RLG00000030515 |
| rosa_multiflora | Rmu_sc0006626.1_g000014 |
| rosa_roxburghii | Rroxscaffold_4G00328750 |
| rosa_rugosa | Rorug01G0025700 Rorug01G0025800 Rorug01G0025900 |
| rosa_samantha | Rh1AG037500 Rh1BG033900 Rh1CG036700 Rh1DG033600 |
| rosa_wichuraiana | Rw1G002910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 486 |
| AarI | CACCTGC | 1 cut(s) | 595 |
| AatII | GACGTC | 1 cut(s) | 954 |
| Acc36I | ACCTGC | 1 cut(s) | 595 |
| AccB1I | GGYRCC | 1 cut(s) | 1202 |
| AciI | CCGC | 3 cut(s) | 998, 1149, 1206 |
| AcoI | YGGCCR | 3 cut(s) | 736, 799, 814 |
| AcsI | RAATTY | 1 cut(s) | 398 |
| AcuI | CTGAAG | 3 cut(s) | 240, 732, 848 |
| AcyI | GRCGYC | 3 cut(s) | 641, 951, 982 |
| AdeI | CACNNNGTG | 2 cut(s) | 1202, 1279 |
| AfaI | GTAC | 4 cut(s) | 284, 744, 751, 1222 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 424, 510, 593, 797, 847, 991, 1158 |
| AgsI | TTSAA | 8 cut(s) | 235, 349, 392, 473, 620, 677, 1091, 1132 |
| AjnI | CCWGG | 4 cut(s) | 130, 490, 841, 1166 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 37, 69 |
| AleI | CACNNNNGTG | 1 cut(s) | 862 |
| AluBI | AGCT | 4 cut(s) | 311, 343, 822, 1240 |
| AluI | AGCT | 4 cut(s) | 311, 343, 822, 1240 |
| Alw21I | GWGCWC | 1 cut(s) | 1242 |
| Alw26I | GTCTC | 2 cut(s) | 14, 1059 |
| AoxI | GGCC | 7 cut(s) | 133, 251, 609, 736, 777, 799, 814 |
| ApeKI | GCWGC | 4 cut(s) | 143, 340, 1145, 1256 |
| ApoI | RAATTY | 1 cut(s) | 398 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 253, 273, 1162 |
| AspS9I | GGNCC | 2 cut(s) | 134, 1188 |
| AsuC2I | CCSGG | 2 cut(s) | 668, 1200 |
| AsuHPI | GGTGA | 5 cut(s) | 218, 709, 754, 1016, 1063 |
| AvaII | GGWCC | 1 cut(s) | 1188 |
| BaeGI | GKGCMC | 1 cut(s) | 1284 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1025, 1058 |
| BanI | GGYRCC | 1 cut(s) | 1202 |
| BanII | GRGCYC | 2 cut(s) | 842, 1242 |
| Bbv12I | GWGCWC | 1 cut(s) | 1242 |
| BbvI | GCAGC | 4 cut(s) | 130, 352, 1157, 1268 |
| BccI | CCATC | 4 cut(s) | 2, 197, 694, 904 |
| BciT130I | CCWGG | 4 cut(s) | 132, 492, 843, 1168 |
| BclI | TGATCA | 1 cut(s) | 208 |
| BcnI | CCSGG | 2 cut(s) | 668, 1200 |
| BcoDI | GTCTC | 2 cut(s) | 14, 1059 |
| BfaI | CTAG | 4 cut(s) | 758, 794, 1103, 1244 |
| BfmI | CTRYAG | 2 cut(s) | 84, 1138 |
| BfuAI | ACCTGC | 1 cut(s) | 595 |
| BisI | GCNGC | 6 cut(s) | 144, 341, 1146, 1149, 1206, 1257 |
| BlsI | GCNGC | 6 cut(s) | 145, 342, 1147, 1150, 1207, 1258 |
| BmcAI | AGTACT | 1 cut(s) | 744 |
| Bme1390I | CCNGG | 6 cut(s) | 132, 492, 668, 843, 1168, 1200 |
| Bme18I | GGWCC | 1 cut(s) | 1188 |
| BmgT120I | GGNCC | 2 cut(s) | 134, 1188 |
| BmiI | GGNNCC | 2 cut(s) | 839, 1204 |
| BmrFI | CCNGG | 6 cut(s) | 132, 492, 668, 843, 1168, 1200 |
| BmrI | ACTGGG | 1 cut(s) | 1221 |
| BmsI | GCATC | 2 cut(s) | 130, 860 |
| BmuI | ACTGGG | 1 cut(s) | 1221 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 839, 871 |
| BpmI | CTGGAG | 1 cut(s) | 864 |
| BpuEI | CTTGAG | 1 cut(s) | 1031 |
| BpuMI | CCSGG | 2 cut(s) | 668, 1200 |
| BsaBI | GATNNNNATC | 1 cut(s) | 207 |
| BsaHI | GRCGYC | 3 cut(s) | 641, 951, 982 |
| BsaI | GGTCTC | 1 cut(s) | 14 |
| BsaJI | CCNNGG | 5 cut(s) | 504, 666, 765, 841, 1153 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 424, 510, 593, 797, 847, 991, 1158 |
| Bse1I | ACTGG | 4 cut(s) | 550, 1185, 1191, 1227 |
| Bse8I | GATNNNNATC | 1 cut(s) | 207 |
| BseBI | CCWGG | 4 cut(s) | 132, 492, 843, 1168 |
| BseDI | CCNNGG | 5 cut(s) | 504, 666, 765, 841, 1153 |
| BseGI | GGATG | 3 cut(s) | 10, 688, 851 |
| BseJI | GATNNNNATC | 1 cut(s) | 207 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 424, 510, 593, 797, 847, 991, 1158 |
| BseMII | CTCAG | 1 cut(s) | 798 |
| BseNI | ACTGG | 4 cut(s) | 550, 1185, 1191, 1227 |
| BseRI | GAGGAG | 1 cut(s) | 850 |
| BseSI | GKGCMC | 1 cut(s) | 1284 |
| BseX3I | CGGCCG | 2 cut(s) | 736, 814 |
| BseXI | GCAGC | 4 cut(s) | 130, 352, 1157, 1268 |
| BsgI | GTGCAG | 1 cut(s) | 129 |
| Bsh1285I | CGRYCG | 2 cut(s) | 739, 817 |
| BshFI | GGCC | 7 cut(s) | 135, 253, 611, 738, 779, 801, 816 |
| BshNI | GGYRCC | 1 cut(s) | 1202 |
| BsiEI | CGRYCG | 2 cut(s) | 739, 817 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1242 |
| BsiSI | CCGG | 3 cut(s) | 612, 668, 1199 |
| BsiWI | CGTACG | 1 cut(s) | 1220 |
| BslFI | GGGAC | 2 cut(s) | 649, 925 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 424, 510, 593, 797, 847, 991, 1158 |
| BsmAI | GTCTC | 2 cut(s) | 14, 1059 |
| BsmFI | GGGAC | 2 cut(s) | 649, 925 |
| BsmI | GAATGC | 3 cut(s) | 549, 683, 1025 |
| BsnI | GGCC | 7 cut(s) | 135, 253, 611, 738, 779, 801, 816 |
| Bso31I | GGTCTC | 1 cut(s) | 14 |
| Bsp1286I | GDGCHC | 3 cut(s) | 842, 1242, 1284 |
| Bsp143I | GATC | 3 cut(s) | 208, 685, 1006 |
| BspACI | CCGC | 3 cut(s) | 998, 1149, 1206 |
| BspANI | GGCC | 7 cut(s) | 135, 253, 611, 738, 779, 801, 816 |
| BspCNI | CTCAG | 1 cut(s) | 797 |
| BspLI | GGNNCC | 2 cut(s) | 839, 1204 |
| BspMI | ACCTGC | 1 cut(s) | 595 |
| BspT107I | GGYRCC | 1 cut(s) | 1202 |
| BspTNI | GGTCTC | 1 cut(s) | 14 |
| BsrI | ACTGG | 4 cut(s) | 550, 1185, 1191, 1227 |
| BssECI | CCNNGG | 5 cut(s) | 504, 666, 765, 841, 1153 |
| BssMI | GATC | 3 cut(s) | 208, 685, 1006 |
| BssNI | GRCGYC | 3 cut(s) | 641, 951, 982 |
| BssT1I | CCWWGG | 2 cut(s) | 504, 1153 |
| Bst2UI | CCWGG | 4 cut(s) | 132, 492, 843, 1168 |
| Bst4CI | ACNGT | 4 cut(s) | 215, 480, 766, 864 |
| Bst6I | CTCTTC | 1 cut(s) | 315 |
| BstACI | GRCGYC | 3 cut(s) | 641, 951, 982 |
| BstC8I | GCNNGC | 3 cut(s) | 381, 803, 824 |
| BstDEI | CTNAG | 3 cut(s) | 25, 410, 784 |
| BstDSI | CCRYGG | 1 cut(s) | 765 |
| BstF5I | GGATG | 3 cut(s) | 10, 688, 851 |
| BstKTI | GATC | 3 cut(s) | 211, 688, 1009 |
| BstMAI | GTCTC | 2 cut(s) | 14, 1059 |
| BstMBI | GATC | 3 cut(s) | 208, 685, 1006 |
| BstMCI | CGRYCG | 2 cut(s) | 739, 817 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 308, 776, 1091, 1253 |
| BstNI | CCWGG | 4 cut(s) | 132, 492, 843, 1168 |
| BstNSI | RCATGY | 2 cut(s) | 105, 123 |
| BstSCI | CCNGG | 6 cut(s) | 130, 490, 666, 841, 1166, 1198 |
| BstSFI | CTRYAG | 2 cut(s) | 84, 1138 |
| BstSLI | GKGCMC | 1 cut(s) | 1284 |
| BstV1I | GCAGC | 4 cut(s) | 130, 352, 1157, 1268 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 965 |
| BstZI | CGGCCG | 2 cut(s) | 736, 814 |
| BsuRI | GGCC | 7 cut(s) | 135, 253, 611, 738, 779, 801, 816 |
| BtgI | CCRYGG | 1 cut(s) | 765 |
| BtsCI | GGATG | 3 cut(s) | 10, 688, 851 |
| BtsIMutI | CAGTG | 1 cut(s) | 792 |
| BveI | ACCTGC | 1 cut(s) | 595 |
| Cac8I | GCNNGC | 3 cut(s) | 381, 803, 824 |
| Cfr13I | GGNCC | 2 cut(s) | 134, 1188 |
| CseI | GACGC | 2 cut(s) | 630, 990 |
| CsiI | ACCWGGT | 1 cut(s) | 490 |
| Csp6I | GTAC | 4 cut(s) | 283, 743, 750, 1221 |
| CviAII | CATG | 5 cut(s) | 32, 102, 120, 573, 1024 |
| CviQI | GTAC | 4 cut(s) | 283, 743, 750, 1221 |
| DdeI | CTNAG | 3 cut(s) | 25, 410, 784 |
| DpnI | GATC | 3 cut(s) | 210, 687, 1008 |
| DpnII | GATC | 3 cut(s) | 208, 685, 1006 |
| DraIII | CACNNNGTG | 2 cut(s) | 1202, 1279 |
| EaeI | YGGCCR | 3 cut(s) | 736, 799, 814 |
| EagI | CGGCCG | 2 cut(s) | 736, 814 |
| Eam1104I | CTCTTC | 1 cut(s) | 315 |
| EarI | CTCTTC | 1 cut(s) | 315 |
| Ecl136II | GAGCTC | 1 cut(s) | 1240 |
| EclXI | CGGCCG | 2 cut(s) | 736, 814 |
| Eco130I | CCWWGG | 2 cut(s) | 504, 1153 |
| Eco147I | AGGCCT | 1 cut(s) | 253 |
| Eco24I | GRGCYC | 2 cut(s) | 842, 1242 |
| Eco31I | GGTCTC | 1 cut(s) | 14 |
| Eco47I | GGWCC | 1 cut(s) | 1188 |
| Eco52I | CGGCCG | 2 cut(s) | 736, 814 |
| Eco53kI | GAGCTC | 1 cut(s) | 1240 |
| Eco57I | CTGAAG | 3 cut(s) | 240, 732, 848 |
| EcoICRI | GAGCTC | 1 cut(s) | 1240 |
| EcoRII | CCWGG | 4 cut(s) | 130, 490, 841, 1166 |
| EcoT14I | CCWWGG | 2 cut(s) | 504, 1153 |
| EcoT22I | ATGCAT | 1 cut(s) | 1025 |
| EcoT38I | GRGCYC | 2 cut(s) | 842, 1242 |
| ErhI | CCWWGG | 2 cut(s) | 504, 1153 |
| FaeI | CATG | 5 cut(s) | 35, 105, 123, 576, 1027 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 238, 270 |
| FaqI | GGGAC | 2 cut(s) | 649, 925 |
| FatI | CATG | 5 cut(s) | 31, 101, 119, 572, 1023 |
| FauNDI | CATATG | 1 cut(s) | 945 |
| FbaI | TGATCA | 1 cut(s) | 208 |
| Fnu4HI | GCNGC | 6 cut(s) | 144, 341, 1146, 1149, 1206, 1257 |
| FokI | GGATG | 3 cut(s) | 17, 675, 838 |
| FriOI | GRGCYC | 2 cut(s) | 842, 1242 |
| Fsp4HI | GCNGC | 6 cut(s) | 144, 341, 1146, 1149, 1206, 1257 |
| FspBI | CTAG | 4 cut(s) | 758, 794, 1103, 1244 |
| GluI | GCNGC | 6 cut(s) | 144, 341, 1146, 1149, 1206, 1257 |
| GsuI | CTGGAG | 1 cut(s) | 864 |
| HaeIII | GGCC | 7 cut(s) | 135, 253, 611, 738, 779, 801, 816 |
| HapII | CCGG | 3 cut(s) | 612, 668, 1199 |
| HgaI | GACGC | 2 cut(s) | 630, 990 |
| Hin1I | GRCGYC | 3 cut(s) | 641, 951, 982 |
| Hin1II | CATG | 5 cut(s) | 35, 105, 123, 576, 1027 |
| HincII | GTYRAC | 2 cut(s) | 731, 955 |
| HindII | GTYRAC | 2 cut(s) | 731, 955 |
| HindIII | AAGCTT | 1 cut(s) | 820 |
| HpaII | CCGG | 3 cut(s) | 612, 668, 1199 |
| HphI | GGTGA | 5 cut(s) | 218, 709, 754, 1016, 1063 |
| Hpy166II | GTNNAC | 6 cut(s) | 521, 584, 731, 955, 1196, 1291 |
| Hpy188I | TCNGA | 6 cut(s) | 193, 279, 903, 1064, 1110, 1188 |
| Hpy188III | TCNNGA | 4 cut(s) | 258, 389, 1010, 1088 |
| Hpy8I | GTNNAC | 6 cut(s) | 521, 584, 731, 955, 1196, 1291 |
| Hpy99I | CGWCG | 1 cut(s) | 193 |
| HpyAV | CCTTC | 6 cut(s) | 116, 243, 264, 292, 503, 1152 |
| HpyCH4III | ACNGT | 4 cut(s) | 215, 480, 766, 864 |
| HpyCH4IV | ACGT | 1 cut(s) | 951 |
| HpyCH4V | TGCA | 7 cut(s) | 123, 146, 340, 526, 933, 1023, 1302 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 308, 776, 1091, 1253 |
| HpyF3I | CTNAG | 3 cut(s) | 25, 410, 784 |
| HpySE526I | ACGT | 1 cut(s) | 951 |
| Hsp92I | GRCGYC | 3 cut(s) | 641, 951, 982 |
| Hsp92II | CATG | 5 cut(s) | 35, 105, 123, 576, 1027 |
| Ksp22I | TGATCA | 1 cut(s) | 208 |
| Kzo9I | GATC | 3 cut(s) | 208, 685, 1006 |
| LmnI | GCTCC | 2 cut(s) | 837, 1245 |
| Lsp1109I | GCAGC | 4 cut(s) | 130, 352, 1157, 1268 |
| LweI | GCATC | 2 cut(s) | 130, 860 |
| MabI | ACCWGGT | 1 cut(s) | 490 |
| MaeI | CTAG | 4 cut(s) | 758, 794, 1103, 1244 |
| MaeII | ACGT | 1 cut(s) | 951 |
| MaeIII | GTNAC | 1 cut(s) | 760 |
| MalI | GATC | 3 cut(s) | 210, 687, 1008 |
| MboI | GATC | 3 cut(s) | 208, 685, 1006 |
| MboII | GAAGA | 4 cut(s) | 176, 258, 332, 870 |
| MhlI | GDGCHC | 3 cut(s) | 842, 1242, 1284 |
| MmeI | TCCRAC | 3 cut(s) | 101, 171, 1288 |
| Mph1103I | ATGCAT | 1 cut(s) | 1025 |
| MroXI | GAANNNNTTC | 3 cut(s) | 253, 273, 1162 |
| MseI | TTAA | 2 cut(s) | 330, 404 |
| MslI | CAYNNNNRTG | 1 cut(s) | 862 |
| MspA1I | CMGCKG | 1 cut(s) | 343 |
| MspI | CCGG | 3 cut(s) | 612, 668, 1199 |
| MspR9I | CCNGG | 6 cut(s) | 132, 492, 668, 843, 1168, 1200 |
| Mva1269I | GAATGC | 3 cut(s) | 549, 683, 1025 |
| MvaI | CCWGG | 4 cut(s) | 132, 492, 843, 1168 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 308, 776, 1091, 1253 |
| NciI | CCSGG | 2 cut(s) | 668, 1200 |
| NdeI | CATATG | 1 cut(s) | 945 |
| NdeII | GATC | 3 cut(s) | 208, 685, 1006 |
| NlaIII | CATG | 5 cut(s) | 35, 105, 123, 576, 1027 |
| NlaIV | GGNNCC | 2 cut(s) | 839, 1204 |
| NmeAIII | GCCGAG | 4 cut(s) | 707, 714, 733, 764 |
| NmuCI | GTSAC | 1 cut(s) | 760 |
| NsiI | ATGCAT | 1 cut(s) | 1025 |
| NspI | RCATGY | 2 cut(s) | 105, 123 |
| OliI | CACNNNNGTG | 1 cut(s) | 862 |
| PaqCI | CACCTGC | 1 cut(s) | 595 |
| PceI | AGGCCT | 1 cut(s) | 253 |
| PctI | GAATGC | 3 cut(s) | 549, 683, 1025 |
| PdmI | GAANNNNTTC | 3 cut(s) | 253, 273, 1162 |
| Pfl23II | CGTACG | 1 cut(s) | 1220 |
| PkrI | GCNGC | 6 cut(s) | 145, 342, 1147, 1150, 1207, 1258 |
| PsiI | TTATAA | 1 cut(s) | 486 |
| Psp124BI | GAGCTC | 1 cut(s) | 1242 |
| Psp6I | CCWGG | 4 cut(s) | 130, 490, 841, 1166 |
| PspGI | CCWGG | 4 cut(s) | 130, 490, 841, 1166 |
| PspLI | CGTACG | 1 cut(s) | 1220 |
| PspN4I | GGNNCC | 2 cut(s) | 839, 1204 |
| PspPI | GGNCC | 2 cut(s) | 134, 1188 |
| PvuII | CAGCTG | 1 cut(s) | 343 |
| RsaI | GTAC | 4 cut(s) | 284, 744, 751, 1222 |
| RsaNI | GTAC | 4 cut(s) | 283, 743, 750, 1221 |
| RseI | CAYNNNNRTG | 1 cut(s) | 862 |
| SacI | GAGCTC | 1 cut(s) | 1242 |
| SaqAI | TTAA | 2 cut(s) | 330, 404 |
| SatI | GCNGC | 6 cut(s) | 144, 341, 1146, 1149, 1206, 1257 |
| Sau3AI | GATC | 3 cut(s) | 208, 685, 1006 |
| Sau96I | GGNCC | 2 cut(s) | 134, 1188 |
| ScaI | AGTACT | 1 cut(s) | 744 |
| ScrFI | CCNGG | 6 cut(s) | 132, 492, 668, 843, 1168, 1200 |
| SduI | GDGCHC | 3 cut(s) | 842, 1242, 1284 |
| SexAI | ACCWGGT | 1 cut(s) | 490 |
| SfaNI | GCATC | 2 cut(s) | 130, 860 |
| SfcI | CTRYAG | 2 cut(s) | 84, 1138 |
| SinI | GGWCC | 1 cut(s) | 1188 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 862 |
| SmlI | CTYRAG | 1 cut(s) | 1010 |
| SmoI | CTYRAG | 1 cut(s) | 1010 |
| SseBI | AGGCCT | 1 cut(s) | 253 |
| SsiI | CCGC | 3 cut(s) | 998, 1149, 1206 |
| SspMI | CTAG | 4 cut(s) | 758, 794, 1103, 1244 |
| SstI | GAGCTC | 1 cut(s) | 1242 |
| StuI | AGGCCT | 1 cut(s) | 253 |
| StyD4I | CCNGG | 6 cut(s) | 130, 490, 666, 841, 1166, 1198 |
| StyI | CCWWGG | 2 cut(s) | 504, 1153 |
| TaaI | ACNGT | 4 cut(s) | 215, 480, 766, 864 |
| TaiI | ACGT | 1 cut(s) | 954 |
| TaqII | GACCGA | 1 cut(s) | 716 |
| TatI | WGTACW | 2 cut(s) | 282, 742 |
| TauI | GCSGC | 2 cut(s) | 1151, 1208 |
| Tru1I | TTAA | 2 cut(s) | 330, 404 |
| Tru9I | TTAA | 2 cut(s) | 330, 404 |
| TscAI | CASTG | 1 cut(s) | 792 |
| TseFI | GTSAC | 1 cut(s) | 760 |
| TseI | GCWGC | 4 cut(s) | 143, 340, 1145, 1256 |
| Tsp45I | GTSAC | 1 cut(s) | 760 |
| TspDTI | ATGAA | 2 cut(s) | 1040, 1113 |
| TspGWI | ACGGA | 2 cut(s) | 112, 177 |
| TspRI | CASTG | 1 cut(s) | 792 |
| VpaK11BI | GGWCC | 1 cut(s) | 1188 |
| XapI | RAATTY | 1 cut(s) | 398 |
| XceI | RCATGY | 2 cut(s) | 105, 123 |
| XmnI | GAANNNNTTC | 3 cut(s) | 253, 273, 1162 |
| XspI | CTAG | 4 cut(s) | 758, 794, 1103, 1244 |
| ZraI | GACGTC | 1 cut(s) | 952 |
| ZrmI | AGTACT | 1 cut(s) | 744 |
| Zsp2I | ATGCAT | 1 cut(s) | 1025 |