Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0008364

Physical Location & Seq

Genomic Coordinates Reverse (-)

3179934 .. 3183355

Gene Structure 3422 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g02870.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGTCTTATGAAAAAAGGCTCACTGCCGTCAAAAAAGCTGCCTCTCTCACTGCTCGCCTCTGTGAGAAGGTACAAAAGACACTGCTGAAGCCGAACACTTCTTCAAAATCAGATAAAAGTACGGCCTTGGTGGCCCATTATGATAGAGCTTCGGACAGAATACAAGAACTTGCAGATCATTCTACTGTCACTACTGCTGGACATGATATTAATAATGGCGTTCATGAAACGAAATTGGCAAAGAACTTGGCATGTCTTGTGGATGAATCTTCTCATATAAATGAGAGAAGACCCAGGAGCAGAATGGAACTCAAGAGGTCTATTGAACTGCGCATTAAGAAGAGGGTGAAGGAACAATACCTCAACGGGAAGTTTCAGCACCTAATGGCTAAAGTAATTGCCACTCCAGAAACTCTTCAAGATGCTTATGATTGTATCAGACTCAACTCCAATATTGACATAGTGTTAACTGATGGGAAAACTACTTTTGGTTCTATGGCTGAAGAGCTGTATCTTGGGAGCTTTGATGTTAATGCTAATACCTTCTCTATCTCAACAAAGGGTGCAAGGAAAGATGTTTTAGTGCTTCCCAATGTGAATCTGAAGATCATCCAGGAAGCCATCAGAATTGTTTTGGAAGTTGTCTACAAGCCCCACTTCTCTAAGATTTCACATGGGTACCGAAGTGGGCGGGGGCATTCCACAGCTTTGAAGTACATAAGCAAGGAAACTGCTGGTTCTGATTGGTGGTTTACATTGCTCGTTAACAAAAAGCTAGATGCTTGTATTCTTGCTAAACTAATATCAGTAATGGAGGAGAAGATAGAAGACCCTAGCCTCTATGTTATGATCCAAAGCATGTTTCATGCAAATGTACTCAACTTTGAGTTTGGTGGTTTCCCCAAAGGTCATGGTCTTCCACAGGAGGGAGTATTGTCCCCTATATTAATGAATATTTATCTTGACCTTTTTGACCGCGAATTTTACAGATTATCAATGAAGTATGAAGCTCTCGTTCCAGGTTTTCATACTGATCAAAAATCCAAGTCTAAACTGCGCAGCTGGTTTAGGAGGAACCTTAAAGGTAATGATCTTGGCTGTGCAGGTGAAGAGAGTTTTAGAGTCCATTCTTGTCGTTTCATGGATGAGATATTCTTTTCGTTTGCGGGTTCTAAGGATGCAGCTCTTAATTTCAAATCTGAGGTTCTAAATTATGTGCAAAAGTCTTTGCACTTGGAAGTTGATGATCAAACAGAATTATTGCCATGTCAAATGTCGCAGGGAATCCGCTTTTTAGGCACTTTGATTAAAAGAAATGTGAAAGAAAGTCCTGCTACAAAAGCGGTTCACAAGTTAAAGGAAAAAGTTGTTCTATTTGGGTTACAGAAGCAAGAGGCATGGGATTCTGGTACAGTTAGTATAGGCAAGAAATGGTTGGGTCATGGTTTGAAGAAGGTCAAGGAATCAGAGATTAAGCATTTAGCCAACAGCAGGTCTGTTCTGAGTCAAATTTCCCATTTGCGTAAATCTGGTATGGAAACTGATCATTGGTACAAGTACTTGCTGAAGATTTGGATGCAAGATGTGAATGCCAAAGCAGCAGAGAGTGAGGAAGCTATCCTGTCTAAGTATGTCTCAGAACCAGCTTTACCTGAAGAACTAAGAAACTCCTTTTATGAGTTTCAGAGGCAAGTGGAAAAATATGTTTCTTCAGAGACCGCTGCTACTCTTGCCCTTTTGCCAAATGCTGGTTCTTCTACCGACTCTGTCATTGTCACTGAGATAATTGCTCCTGTTATTGCAATAAAAAAGCGTCTCCAACGATATGGATTGATCACACGTGATGGTTATCCCCGTGCAACGTCTTTGCTTGTTTTACAAGATAATCTTCAAATTATCGACTGGTTTGCAGGTATTGTTCGCCGTTGGCTTAGATGGTATGCCAAGTGTGATAACTTCAATGAGGTAAAGCTCTTGATCTGTGATCTGGTAAGAAAATCATGCATCCGAACACTAGCATCAAAGTATCGTGTGCATGAAGCTGATATAGAAAATCGATTTGACACTGAACTAAGCAGTATTCCATCTACCCTAGAAGTTGAGCAAGAGATGGTAGATGAAACATCGGACCCTCAGGCTTTCGAGAACGATGAGGCTTTAATGTATGGAATTTCTTACAGTGGCTTGTGTTTGCTCTCTTTAGCAAGAATGGTGAGCCAGTCACGACCTTGCAATTGTTTTGTCATTGGGTGTACAGCTCCGGCACCATGTGTCTATACTCTTCATGTAATGGAAAGGCAAAAGTTTCCTGGCTGGAAGACTGGGTTCTCAAGTTGCATTCATCCCAGCTTGAATAGACGGCGAGTTGCGTTGTGCAAGCAACATCTCAAGAATTTGTATCTTGGTGATATATCACTTCAATCCATTGATTTTGGGGCATGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0000959 GO:0000963 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006109 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009507 GO:0009536 GO:0009791 GO:0009845 GO:0009889 GO:0009987 GO:0010467 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0019222 GO:0032501 GO:0032502 GO:0032881 GO:0032885 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048856 GO:0050789 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090351 GO:0090615 GO:0140053 GO:1900864 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Intron_maturas2 RVT_1

Protein Analysis

816

Amino Acids

92.55

Weight (kDa)

9.04

Isoelectric Point (pI)

47.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_1	PF00078	194 - 408	3.9e-08	Reverse transcriptase (RNA-dependent DNA polymerase)
Intron_maturas2	PF01348	595 - 695	1.8e-10	Type II intron maturase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008364)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74350
fragaria_vesca	FvH4_7g02870
malus_domestica	MD02G1287300.v1.1
prunus_persica	Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1
pyrus_communis	pycom02g24350
rosa_chinensis	RchiOBHm_Chr1g0323821
rosa_laevigata	RLG00000030266
rosa_roxburghii	Rroxscaffold_4G00326400
rosa_rugosa	Rorug01G0039700
rosa_samantha	Rh1AG057100 Rh1BG048100 Rh1DG062200
rosa_wichuraiana	Rw1G004880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1094
Acc16I	TGCGCA	2 cut(s)	332, 1058
Acc36I	ACCTGC	3 cut(s)	1094, 1482, 1901
Acc65I	GGTACC	1 cut(s)	678
AccB1I	GGYRCC	2 cut(s)	678, 2263
AccB7I	CCANNNNNTGG	1 cut(s)	1748
AccI	GTMKAC	1 cut(s)	645
AccII	CGCG	1 cut(s)	978
AciI	CCGC	6 cut(s)	691, 976, 1166, 1288, 1343, 1719
AclWI	GGATC	1 cut(s)	844
AcsI	RAATTY	4 cut(s)	980, 1509, 2169, 2392
AcuI	CTGAAG	6 cut(s)	107, 522, 623, 1586, 1674, 1695
AcvI	CACGTG	1 cut(s)	1841
AdeI	CACNNNGTG	1 cut(s)	2270
AfaI	GTAC	9 cut(s)	72, 121, 680, 716, 876, 1411, 1553, 1559, 2254
AfiI	CCNNNNNNNGG	3 cut(s)	926, 1491, 1748
AflIII	ACRYGT	1 cut(s)	1838
AjnI	CCWGG	4 cut(s)	293, 612, 1018, 2308
AjuI	GAANNNNNNNTTGG	4 cut(s)	846, 878, 1735, 1767
Alw26I	GTCTC	3 cut(s)	1639, 1709, 1820
AlwI	GGATC	1 cut(s)	844
AoxI	GGCC	2 cut(s)	123, 132
ApeKI	GCWGC	5 cut(s)	38, 1059, 1181, 1598, 1721
ApoI	RAATTY	4 cut(s)	980, 1509, 2169, 2392
AseI	ATTAAT	2 cut(s)	210, 947
Asp700I	GAANNNNTTC	1 cut(s)	414
Asp718I	GGTACC	1 cut(s)	678
AspLEI	GCGC	2 cut(s)	333, 1059
AspS9I	GGNCC	2 cut(s)	133, 2128
AsuHPI	GGTGA	4 cut(s)	358, 1118, 2224, 2417
AvaII	GGWCC	1 cut(s)	2128
AxyI	CCTNAGG	1 cut(s)	2133
BaeI	ACNNNNGTAYC	4 cut(s)	662, 670, 695, 703
BanI	GGYRCC	2 cut(s)	678, 2263
BarI	GAAGNNNNNNTAC	2 cut(s)	341, 373
BbrPI	CACGTG	1 cut(s)	1841
BbsI	GAAGAC	4 cut(s)	295, 834, 908, 2324
BbvI	GCAGC	5 cut(s)	25, 1071, 1193, 1610, 1708
BccI	CCATC	6 cut(s)	467, 629, 1838, 1929, 2092, 2104
BceAI	ACGGC	4 cut(s)	11, 138, 1908, 2375
BcgI	CGANNNNNNTGC	2 cut(s)	1889, 1923
BciT130I	CCWGG	4 cut(s)	295, 614, 1020, 2310
BclI	TGATCA	4 cut(s)	1033, 1246, 1543, 1833
BcoDI	GTCTC	3 cut(s)	1639, 1709, 1820
BfaI	CTAG	4 cut(s)	776, 834, 2015, 2093
BfuAI	ACCTGC	3 cut(s)	1094, 1482, 1901
BglI	GCCNNNNNGGC	1 cut(s)	131
BisI	GCNGC	5 cut(s)	39, 1060, 1182, 1599, 1722
BlsI	GCNGC	5 cut(s)	40, 1061, 1183, 1600, 1723
BmcAI	AGTACT	1 cut(s)	1559
Bme1390I	CCNGG	4 cut(s)	295, 614, 1020, 2310
Bme18I	GGWCC	1 cut(s)	2128
BmgT120I	GGNCC	2 cut(s)	133, 2128
BmiI	GGNNCC	4 cut(s)	680, 1076, 2130, 2265
BmrFI	CCNGG	4 cut(s)	295, 614, 1020, 2310
BmrI	ACTGGG	1 cut(s)	2331
BmsI	GCATC	6 cut(s)	412, 769, 1168, 1566, 2013, 2027
BmuI	ACTGGG	1 cut(s)	2331
BpiI	GAAGAC	4 cut(s)	295, 834, 908, 2324
BpmI	CTGGAG	1 cut(s)	390
BpuEI	CTTGAG	3 cut(s)	296, 2314, 2372
Bsa29I	ATCGAT	1 cut(s)	2056
BsaAI	YACGTR	1 cut(s)	1841
BsaBI	GATNNNNATC	1 cut(s)	1848
BsaI	GGTCTC	1 cut(s)	1709
BsaJI	CCNNGG	2 cut(s)	126, 293
Bsc4I	CCNNNNNNNGG	3 cut(s)	926, 1491, 1748
Bse1I	ACTGG	3 cut(s)	1907, 2218, 2326
Bse21I	CCTNAGG	1 cut(s)	2133
Bse3DI	GCAATG	1 cut(s)	755
Bse8I	GATNNNNATC	1 cut(s)	1848
BseBI	CCWGG	4 cut(s)	295, 614, 1020, 2310
BseCI	ATCGAT	1 cut(s)	2056
BseDI	CCNNGG	2 cut(s)	126, 293
BseGI	GGATG	7 cut(s)	268, 609, 1150, 1183, 1581, 2004, 2341
BseJI	GATNNNNATC	1 cut(s)	1848
BseLI	CCNNNNNNNGG	3 cut(s)	926, 1491, 1748
BseMI	GCAATG	1 cut(s)	755
BseMII	CTCAG	5 cut(s)	1191, 1493, 1650, 1770, 2147
BseNI	ACTGG	3 cut(s)	1907, 2218, 2326
BseRI	GAGGAG	1 cut(s)	830
BseXI	GCAGC	5 cut(s)	25, 1071, 1193, 1610, 1708
BseYI	CCCAGC	1 cut(s)	2345
BsgI	GTGCAG	1 cut(s)	1122
Bsh1236I	CGCG	1 cut(s)	978
BshFI	GGCC	2 cut(s)	125, 134
BshNI	GGYRCC	2 cut(s)	678, 2263
BshVI	ATCGAT	1 cut(s)	2056
BsiSI	CCGG	1 cut(s)	2261
BslFI	GGGAC	1 cut(s)	922
BslI	CCNNNNNNNGG	3 cut(s)	926, 1491, 1748
BsmAI	GTCTC	3 cut(s)	1639, 1709, 1820
BsmBI	CGTCTC	1 cut(s)	1820
BsmFI	GGGAC	1 cut(s)	922
BsmI	GAATGC	3 cut(s)	697, 1594, 2337
BsnI	GGCC	2 cut(s)	125, 134
Bso31I	GGTCTC	1 cut(s)	1709
Bsp1407I	TGTACA	1 cut(s)	2252
BspACI	CCGC	6 cut(s)	691, 976, 1166, 1288, 1343, 1719
BspANI	GGCC	2 cut(s)	125, 134
BspCNI	CTCAG	5 cut(s)	1192, 1494, 1649, 1771, 2146
BspDI	ATCGAT	1 cut(s)	2056
BspFNI	CGCG	1 cut(s)	978
BspHI	TCATGA	1 cut(s)	223
BspLI	GGNNCC	4 cut(s)	680, 1076, 2130, 2265
BspMI	ACCTGC	3 cut(s)	1094, 1482, 1901
BspPI	GGATC	1 cut(s)	844
BspQI	GCTCTTC	1 cut(s)	498
BspT107I	GGYRCC	2 cut(s)	678, 2263
BspTNI	GGTCTC	1 cut(s)	1709
BsrDI	GCAATG	1 cut(s)	755
BsrGI	TGTACA	1 cut(s)	2252
BsrI	ACTGG	3 cut(s)	1907, 2218, 2326
BssECI	CCNNGG	2 cut(s)	126, 293
BssT1I	CCWWGG	1 cut(s)	126
Bst2UI	CCWGG	4 cut(s)	295, 614, 1020, 2310
Bst4CI	ACNGT	3 cut(s)	187, 1414, 2180
Bst6I	CTCTTC	5 cut(s)	335, 420, 498, 1104, 2286
BstAUI	TGTACA	1 cut(s)	2252
BstBAI	YACGTR	1 cut(s)	1841
BstC8I	GCNNGC	2 cut(s)	55, 2378
BstF5I	GGATG	7 cut(s)	268, 609, 1150, 1183, 1581, 2004, 2341
BstFNI	CGCG	1 cut(s)	978
BstHHI	GCGC	2 cut(s)	333, 1059
BstMAI	GTCTC	3 cut(s)	1639, 1709, 1820
BstMWI	GCNNNNNNNGC	5 cut(s)	131, 1296, 1340, 1598, 1730
BstNI	CCWGG	4 cut(s)	295, 614, 1020, 2310
BstNSI	RCATGY	2 cut(s)	255, 862
BstSCI	CCNGG	4 cut(s)	293, 612, 1018, 2308
BstUI	CGCG	1 cut(s)	978
BstV1I	GCAGC	5 cut(s)	25, 1071, 1193, 1610, 1708
BstV2I	GAAGAC	4 cut(s)	295, 834, 908, 2324
BstXI	CCANNNNNNTGG	1 cut(s)	1826
Bsu15I	ATCGAT	1 cut(s)	2056
Bsu36I	CCTNAGG	1 cut(s)	2133
BsuRI	GGCC	2 cut(s)	125, 134
BsuTUI	ATCGAT	1 cut(s)	2056
BtsCI	GGATG	7 cut(s)	268, 609, 1150, 1183, 1581, 2004, 2341
BtsI	GCAGTG	3 cut(s)	21, 48, 80
BtsIMutI	CAGTG	6 cut(s)	21, 48, 80, 1776, 2064, 2185
BveI	ACCTGC	3 cut(s)	1094, 1482, 1901
Cac8I	GCNNGC	2 cut(s)	55, 2378
CciI	TCATGA	1 cut(s)	223
CfoI	GCGC	2 cut(s)	333, 1059
Cfr13I	GGNCC	2 cut(s)	133, 2128
ClaI	ATCGAT	1 cut(s)	2056
CseI	GACGC	1 cut(s)	1802
Csp6I	GTAC	9 cut(s)	71, 120, 679, 715, 875, 1410, 1552, 1558, 2253
CviQI	GTAC	9 cut(s)	71, 120, 679, 715, 875, 1410, 1552, 1558, 2253
DraIII	CACNNNGTG	1 cut(s)	2270
Eam1104I	CTCTTC	5 cut(s)	335, 420, 498, 1104, 2286
EarI	CTCTTC	5 cut(s)	335, 420, 498, 1104, 2286
Eco130I	CCWWGG	1 cut(s)	126
Eco31I	GGTCTC	1 cut(s)	1709
Eco47I	GGWCC	1 cut(s)	2128
Eco57I	CTGAAG	6 cut(s)	107, 522, 623, 1586, 1674, 1695
Eco72I	CACGTG	1 cut(s)	1841
Eco81I	CCTNAGG	1 cut(s)	2133
EcoRII	CCWGG	4 cut(s)	293, 612, 1018, 2308
EcoT14I	CCWWGG	1 cut(s)	126
EcoT22I	ATGCAT	1 cut(s)	2006
ErhI	CCWWGG	1 cut(s)	126
Esp3I	CGTCTC	1 cut(s)	1820
FalI	AAGNNNNNCTT	4 cut(s)	641, 673, 1872, 1904
FaqI	GGGAC	1 cut(s)	922
FauI	CCCGC	2 cut(s)	684, 1159
FbaI	TGATCA	4 cut(s)	1033, 1246, 1543, 1833
FblI	GTMKAC	1 cut(s)	645
Fnu4HI	GCNGC	5 cut(s)	39, 1060, 1182, 1599, 1722
FokI	GGATG	7 cut(s)	275, 596, 1157, 1190, 1588, 1991, 2328
Fsp4HI	GCNGC	5 cut(s)	39, 1060, 1182, 1599, 1722
FspBI	CTAG	4 cut(s)	776, 834, 2015, 2093
FspI	TGCGCA	2 cut(s)	332, 1058
GlaI	GCGC	2 cut(s)	332, 1058
GluI	GCNGC	5 cut(s)	39, 1060, 1182, 1599, 1722
GsaI	CCCAGC	1 cut(s)	2349
GsuI	CTGGAG	1 cut(s)	390
HaeIII	GGCC	2 cut(s)	125, 134
HapII	CCGG	1 cut(s)	2261
HgaI	GACGC	1 cut(s)	1802
HhaI	GCGC	2 cut(s)	333, 1059
Hin6I	GCGC	2 cut(s)	331, 1057
HinP1I	GCGC	2 cut(s)	331, 1057
HincII	GTYRAC	2 cut(s)	468, 766
HindII	GTYRAC	2 cut(s)	468, 766
HinfI	GANTC	9 cut(s)	266, 441, 598, 1122, 1284, 1403, 1463, 1504, 1763
HpaI	GTTAAC	2 cut(s)	468, 766
HpaII	CCGG	1 cut(s)	2261
HphI	GGTGA	4 cut(s)	358, 1118, 2224, 2417
Hpy166II	GTNNAC	6 cut(s)	468, 646, 753, 766, 1348, 2253
Hpy188III	TCNNGA	9 cut(s)	224, 313, 407, 419, 962, 1975, 2143, 2223, 2389
Hpy8I	GTNNAC	6 cut(s)	468, 646, 753, 766, 1348, 2253
HpyAV	CCTTC	4 cut(s)	61, 343, 553, 1447
HpyCH4III	ACNGT	3 cut(s)	187, 1414, 2180
HpyCH4IV	ACGT	2 cut(s)	1840, 1862
HpyF10VI	GCNNNNNNNGC	5 cut(s)	131, 1296, 1340, 1598, 1730
HpySE526I	ACGT	2 cut(s)	1840, 1862
HspAI	GCGC	2 cut(s)	331, 1057
KpnI	GGTACC	1 cut(s)	682
Ksp22I	TGATCA	4 cut(s)	1033, 1246, 1543, 1833
KspAI	GTTAAC	2 cut(s)	468, 766
LguI	GCTCTTC	1 cut(s)	498
LmnI	GCTCC	4 cut(s)	297, 519, 1795, 2263
Lsp1109I	GCAGC	5 cut(s)	25, 1071, 1193, 1610, 1708
LweI	GCATC	6 cut(s)	412, 769, 1168, 1566, 2013, 2027
MaeI	CTAG	4 cut(s)	776, 834, 2015, 2093
MaeII	ACGT	2 cut(s)	1840, 1862
MaeIII	GTNAC	4 cut(s)	187, 1380, 1774, 2220
MfeI	CAATTG	1 cut(s)	2233
MlyI	GAGTC	4 cut(s)	435, 1131, 1513, 1757
MmeI	TCCRAC	1 cut(s)	1843
Mph1103I	ATGCAT	1 cut(s)	2006
MroXI	GAANNNNTTC	1 cut(s)	414
MslI	CAYNNNNRTG	3 cut(s)	279, 870, 2443
MspA1I	CMGCKG	2 cut(s)	1062, 1721
MspI	CCGG	1 cut(s)	2261
MspR9I	CCNGG	4 cut(s)	295, 614, 1020, 2310
MunI	CAATTG	1 cut(s)	2233
Mva1269I	GAATGC	3 cut(s)	697, 1594, 2337
MvaI	CCWGG	4 cut(s)	295, 614, 1020, 2310
MvnI	CGCG	1 cut(s)	978
MwoI	GCNNNNNNNGC	5 cut(s)	131, 1296, 1340, 1598, 1730
NlaIV	GGNNCC	4 cut(s)	680, 1076, 2130, 2265
NmuCI	GTSAC	3 cut(s)	187, 1774, 2220
NsbI	TGCGCA	2 cut(s)	332, 1058
NsiI	ATGCAT	1 cut(s)	2006
NspI	RCATGY	2 cut(s)	255, 862
PagI	TCATGA	1 cut(s)	223
PaqCI	CACCTGC	1 cut(s)	1094
PciSI	GCTCTTC	1 cut(s)	498
PctI	GAATGC	3 cut(s)	697, 1594, 2337
PdmI	GAANNNNTTC	1 cut(s)	414
PfeI	GAWTC	5 cut(s)	266, 598, 1284, 1403, 1463
PflFI	GACNNNGTC	1 cut(s)	1766
PflMI	CCANNNNNTGG	1 cut(s)	1748
PfoI	TCCNGGA	1 cut(s)	612
PkrI	GCNGC	5 cut(s)	40, 1061, 1183, 1600, 1723
PleI	GAGTC	4 cut(s)	435, 1130, 1512, 1757
PmaCI	CACGTG	1 cut(s)	1841
PmlI	CACGTG	1 cut(s)	1841
PpsI	GAGTC	4 cut(s)	435, 1130, 1512, 1757
Ppu21I	YACGTR	1 cut(s)	1841
PshBI	ATTAAT	2 cut(s)	210, 947
Psp6I	CCWGG	4 cut(s)	293, 612, 1018, 2308
PspCI	CACGTG	1 cut(s)	1841
PspFI	CCCAGC	1 cut(s)	2345
PspGI	CCWGG	4 cut(s)	293, 612, 1018, 2308
PspN4I	GGNNCC	4 cut(s)	680, 1076, 2130, 2265
PspPI	GGNCC	2 cut(s)	133, 2128
PsrI	GAACNNNNNNTAC	2 cut(s)	1632, 1664
PsyI	GACNNNGTC	1 cut(s)	1766
PvuII	CAGCTG	1 cut(s)	1062
RsaI	GTAC	9 cut(s)	72, 121, 680, 716, 876, 1411, 1553, 1559, 2254
RsaNI	GTAC	9 cut(s)	71, 120, 679, 715, 875, 1410, 1552, 1558, 2253
RseI	CAYNNNNRTG	3 cut(s)	279, 870, 2443
SapI	GCTCTTC	1 cut(s)	498
SatI	GCNGC	5 cut(s)	39, 1060, 1182, 1599, 1722
Sau96I	GGNCC	2 cut(s)	133, 2128
ScaI	AGTACT	1 cut(s)	1559
SchI	GAGTC	4 cut(s)	435, 1131, 1513, 1757
ScrFI	CCNGG	4 cut(s)	295, 614, 1020, 2310
SfaNI	GCATC	6 cut(s)	412, 769, 1168, 1566, 2013, 2027
SfiI	GGCCNNNNNGGCC	1 cut(s)	131
SinI	GGWCC	1 cut(s)	2128
SmiMI	CAYNNNNRTG	3 cut(s)	279, 870, 2443
SmlI	CTYRAG	3 cut(s)	311, 2329, 2387
SmoI	CTYRAG	3 cut(s)	311, 2329, 2387
SsiI	CCGC	6 cut(s)	691, 976, 1166, 1288, 1343, 1719
SspI	AATATT	2 cut(s)	454, 955
SspMI	CTAG	4 cut(s)	776, 834, 2015, 2093
StyD4I	CCNGG	4 cut(s)	293, 612, 1018, 2308
StyI	CCWWGG	1 cut(s)	126
TaaI	ACNGT	3 cut(s)	187, 1414, 2180
TaiI	ACGT	2 cut(s)	1843, 1865
TaqI	TCGA	3 cut(s)	1899, 2056, 2142
TatI	WGTACW	4 cut(s)	714, 874, 1557, 2252
TfiI	GAWTC	5 cut(s)	266, 598, 1284, 1403, 1463
TscAI	CASTG	6 cut(s)	28, 55, 87, 1783, 2071, 2185
TseFI	GTSAC	3 cut(s)	187, 1774, 2220
TseI	GCWGC	5 cut(s)	38, 1059, 1181, 1598, 1721
Tsp45I	GTSAC	3 cut(s)	187, 1774, 2220
TspRI	CASTG	6 cut(s)	28, 55, 87, 1783, 2071, 2185
Tth111I	GACNNNGTC	1 cut(s)	1766
Van91I	CCANNNNNTGG	1 cut(s)	1748
VpaK11BI	GGWCC	1 cut(s)	2128
VspI	ATTAAT	2 cut(s)	210, 947
XapI	RAATTY	4 cut(s)	980, 1509, 2169, 2392
XceI	RCATGY	2 cut(s)	255, 862
XcmI	CCANNNNNNNNNTGG	1 cut(s)	301
XmiI	GTMKAC	1 cut(s)	645
XmnI	GAANNNNTTC	1 cut(s)	414
XspI	CTAG	4 cut(s)	776, 834, 2015, 2093
ZrmI	AGTACT	1 cut(s)	1559
Zsp2I	ATGCAT	1 cut(s)	2006

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.