Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0008364

Physical Location & Seq

Genomic Coordinates Reverse (-)

34404796 .. 34407860

Gene Structure 3065 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1287300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2463 bp

ATGTCTTTTGAAAAAAGGCTTGCTGTTGCCAGAAAAGCTGCCACTCTCACTGCTGGCCTCTGCGATAAGGTACAAAAGGTGGTTGTGGAGTCGGGCACTCGTTCAAACACAGAAAAGGTTACTACCGCTGCCGCAGCTGGTTATGATAGAGCTTCGGAAAGAGTACAAGAATCTGCAGATCATTGTGCTGTTGCCAGTGCTGCCGCTGATGGTGTCAATAGTGGCATTCGTAAAATGAAATTGGCAGAGAATTTAGCCTGTCTGGTAGAGGAGTCCTCTCATATCAATGAGAGAAGACCCAAGGGCCGAATGCAACTCAAGAGGTGTCTTGAATTGCGCATAAAGAAGAGAGTGAAGGAACAATACATCAATGGGAAGTTTCGAGACCTAATGGTAAAAGTAATTGCCAATCCAGAAACTCTTCAAGATGCTTATGATTGTATTAGACTCAACTCAAATGTTGATATAGCATTAAGTGATGCGAAAAACTCTTTTGATTCTATGGCTGAAGAGATGCGTCATGGGAGTTTTGATGCTAATGCCAATACCTTTTCTATCTCAAAAAGGGGTGTAGGGAATGAAGTCTTAGTACTTCCTAATCTAAATCTGAAGGTCATTCAAGAAGCCATCAGAGTTGTTCTTGAAGTTGTTTACAAGCCCGACTTCTCTAAGATTTCACATGGTTATCGAAGTGGGAGGGGGCATTCCACGGCTCTGAAGTACATTAGCAAGGAGATTTCGAATCCTGATTGGTGGTTTACAGTGCTCTTAAATAAAAAGCTAGATGCTTGTATACTTGGCGAACTCTTAAAAGCAATGGAGGGCAAGATAGTAGACCCCAGCCTCTTTGATATGATCAAAAGCATGTTTCATGCCAATGTGCTCAACTTGGAGTTTGGTGGTTTCCCGAAAGGTCATGGTCTTCCACAGGAGGGAATATTGTCCCCTATATTAATGAATATATATCTCGACCAATTTGACCGTGAATTTTACAGATTGTCGATGAAATATGAAGCTCTCAGTCTAGATTCTCAAAATGATCAAAATTCCCAGTCTAAGCTGCGCAGCTGGTTTAGGAGACACCTGAAAGGTAATAATGATCTTGGCTGTGCGGGTGAAGAGAGTTGTAGCGCAAGGGTCCATTCTTGTCGCTTCATGGATGAGATATTTTTTTCGTTTTCTGGTTCTAAGGATGCTGCTCTTGAGTTCAAATCTGAGGTCCTAAACTACTTGCAGAAGTCTTTGCACTTGGAAGTCGATGATCAAACAGAATTATTGCCATGTCAAAAACCGCATGGGATTCGCTTTTTAGGCACTTTGGTTAGAAGAAACGTGATAGAAAGTCCTGCCACAAAAGCAGTCCACAAGTTGAAGGAAAAAGTAGCTTTGTTTGGTCTACAGAAGCAAGAGGCCTGGAATGTTGGGACGGTTCATATAGGGAAGAAATGGTTAGGTCATGGTTTGAAGAAGGTCAAGGAGTCAGAGATCAAGCATTTAGCTGACAGTAGTTCTGTTCTGAACCAAATTTCCCATTTCCGTAAGTTTGGTATGGAAACTGATCATTGGTACAAGCACTTGTTGAAGATATGGATGCAAGACGTCAATGCCAAAGCAGAAGAGAGTGAGGAAGCTGTCCTGTCTAAGCATGTAGCAGAACCAGCTCTACCAGAAGAGCTAACAAACTCCTTTTACGAATTTCAGAGACAGGTGGAAAAGTATGTTTCTTCTGAGACCTCTTCTATTCTTGCCCTTTTGCCAAATGCCGGTTCTTCCGCTGAATCTGTTGTCATCACTGAGATAATTGCTCCTGTTAATGCCGTTAAAAAGCGTCTCCAACGATATGGATTGACCACATCTGATGGTTATCCCCGTACATCCTCTTTGCTTGTTTTACAAGATAATGACCAAATCATCGACTGGTTTTCAGGCATTGTTCGCCGTTGGCTGAGATGGTATGCCGAGTGTGTAAACTTTAAGGAGGTAAAGCTGTTGATTTCGGATCTAGTTAGAAAATCTTGCATCCGAACTCTTGCAGCGAAGTATCGTGTGCATGAAAATGAGATAGAAAGACGTTTTGACACAGAACTAAGCAGGATTCCGTCTACCCAAGAAATAGAACAAGAGATGGTTGATGAGACATCAGATACTCAGGCGTTTGAAAACGATGAGGCATTAATGTATGGAATTTCTTACAGTGGCTTGTGTGTACTCTCCCTTGCAAGAATGGTGAGCGAGTCACGGCCCTGCAATTGTTTTGTGTTCGGGTGTATGGCTTCGGCGCCGAGTGTTTATACACTTCATGTGATGGAAAGGCAGAAGTTTCCGGGGTGGAAGACAGGGTTCTCAAGTTGCATTCATCCCAGCTTGAATAGAAGGAGAATTGGTTTGTGCAAGCAACATTTAAAGGATTTGTACCTTGGTCATGTATCACTTCAGTCCGTTGATTTCGGGGCGTGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0000959 GO:0000963 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006109 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009507 GO:0009536 GO:0009791 GO:0009845 GO:0009889 GO:0009987 GO:0010467 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0019222 GO:0032501 GO:0032502 GO:0032881 GO:0032885 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048856 GO:0050789 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090351 GO:0090615 GO:0140053 GO:1900864 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Intron_maturas2 RVT_1

Protein Analysis

821

Amino Acids

92.77

Weight (kDa)

8.58

Isoelectric Point (pI)

47.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_1	PF00078	196 - 418	3.9e-08	Reverse transcriptase (RNA-dependent DNA polymerase)
Intron_maturas2	PF01348	600 - 699	2.5e-09	Type II intron maturase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008364)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74350
fragaria_vesca	FvH4_7g02870
malus_domestica	MD02G1287300.v1.1
prunus_persica	Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1
pyrus_communis	pycom02g24350
rosa_chinensis	RchiOBHm_Chr1g0323821
rosa_laevigata	RLG00000030266
rosa_roxburghii	Rroxscaffold_4G00326400
rosa_rugosa	Rorug01G0039700
rosa_samantha	Rh1AG057100 Rh1BG048100 Rh1DG062200
rosa_wichuraiana	Rw1G004880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1602
Acc16I	TGCGCA	2 cut(s)	338, 1064
AccB1I	GGYRCC	1 cut(s)	2278
AccI	GTMKAC	4 cut(s)	793, 834, 1396, 2102
AciI	CCGC	6 cut(s)	126, 132, 204, 1112, 1292, 1773
AclWI	GGATC	1 cut(s)	2007
AcsI	RAATTY	6 cut(s)	250, 986, 1045, 1524, 1694, 2184
AcuI	CTGAAG	4 cut(s)	528, 629, 737, 2417
AcyI	GRCGYC	2 cut(s)	1599, 2279
AfaI	GTAC	8 cut(s)	72, 165, 591, 722, 1568, 1873, 2208, 2414
AfiI	CCNNNNNNNGG	2 cut(s)	932, 1763
AjnI	CCWGG	1 cut(s)	1412
AjuI	GAANNNNNNNTTGG	2 cut(s)	1750, 1782
AloI	GAACNNNNNNTCC	2 cut(s)	1511, 1543
Alw21I	GWGCWC	2 cut(s)	768, 885
Alw26I	GTCTC	6 cut(s)	378, 1072, 1696, 1724, 1835, 2129
AlwI	GGATC	1 cut(s)	2007
AoxI	GGCC	4 cut(s)	55, 304, 1410, 2240
ApeKI	GCWGC	8 cut(s)	38, 128, 134, 200, 1060, 1065, 1196, 2033
ApoI	RAATTY	6 cut(s)	250, 986, 1045, 1524, 1694, 2184
ArsI	GACNNNNNNTTYG	2 cut(s)	1203, 1235
AseI	ATTAAT	2 cut(s)	953, 2174
Asp700I	GAANNNNTTC	1 cut(s)	420
AspLEI	GCGC	4 cut(s)	339, 1065, 1133, 2281
AspS9I	GGNCC	4 cut(s)	304, 1138, 1219, 2241
AsuC2I	CCSGG	1 cut(s)	2325
AsuHPI	GGTGA	2 cut(s)	1127, 2239
AsuII	TTCGAA	1 cut(s)	740
AvaII	GGWCC	2 cut(s)	1138, 1219
BaeGI	GKGCMC	1 cut(s)	98
BanI	GGYRCC	1 cut(s)	2278
BarI	GAAGNNNNNNTAC	4 cut(s)	347, 379, 573, 605
BbsI	GAAGAC	3 cut(s)	301, 914, 2339
Bbv12I	GWGCWC	2 cut(s)	768, 885
BbvI	GCAGC	8 cut(s)	25, 115, 146, 187, 1047, 1077, 1183, 2045
BccI	CCATC	6 cut(s)	203, 635, 1853, 1944, 2119, 2299
BceAI	ACGGC	4 cut(s)	726, 1802, 1923, 2255
BcgI	CGANNNNNNTGC	2 cut(s)	1283, 1317
BciT130I	CCWGG	1 cut(s)	1414
BclI	TGATCA	4 cut(s)	855, 1039, 1261, 1558
BcnI	CCSGG	1 cut(s)	2325
BcoDI	GTCTC	6 cut(s)	378, 1072, 1696, 1724, 1835, 2129
BfaI	CTAG	3 cut(s)	782, 1025, 2003
BfmI	CTRYAG	2 cut(s)	174, 1397
BfoI	RGCGCY	1 cut(s)	2282
BmcAI	AGTACT	1 cut(s)	591
Bme1390I	CCNGG	2 cut(s)	1414, 2325
Bme18I	GGWCC	2 cut(s)	1138, 1219
BmgT120I	GGNCC	4 cut(s)	304, 1138, 1219, 2241
BmiI	GGNNCC	2 cut(s)	1139, 2280
BmrFI	CCNGG	2 cut(s)	1414, 2325
BmrI	ACTGGG	1 cut(s)	1045
BmsI	GCATC	8 cut(s)	418, 469, 504, 523, 775, 1183, 1581, 2028
BmuI	ACTGGG	1 cut(s)	1045
BpiI	GAAGAC	3 cut(s)	301, 914, 2339
BplI	GAGNNNNNCTC	2 cut(s)	260, 292
Bpu14I	TTCGAA	1 cut(s)	740
BpuEI	CTTGAG	3 cut(s)	302, 1223, 2329
BpuMI	CCSGG	1 cut(s)	2325
BsaBI	GATNNNNATC	1 cut(s)	1863
BsaHI	GRCGYC	2 cut(s)	1599, 2279
BsaI	GGTCTC	2 cut(s)	378, 1724
BsaJI	CCNNGG	4 cut(s)	300, 708, 2324, 2416
BsaXI	ACNNNNNCTCC	2 cut(s)	2368, 2398
Bsc4I	CCNNNNNNNGG	2 cut(s)	932, 1763
Bse118I	RCCGGY	1 cut(s)	1763
Bse1I	ACTGG	3 cut(s)	195, 1051, 1922
Bse3DI	GCAATG	1 cut(s)	822
Bse8I	GATNNNNATC	1 cut(s)	1863
BseBI	CCWGG	1 cut(s)	1414
BseDI	CCNNGG	4 cut(s)	300, 708, 2324, 2416
BseGI	GGATG	6 cut(s)	1165, 1198, 1596, 1874, 2019, 2356
BseJI	GATNNNNATC	1 cut(s)	1863
BseLI	CCNNNNNNNGG	2 cut(s)	932, 1763
BseMI	GCAATG	1 cut(s)	822
BseMII	CTCAG	6 cut(s)	1033, 1206, 1719, 1785, 1937, 2162
BseNI	ACTGG	3 cut(s)	195, 1051, 1922
BseRI	GAGGAG	1 cut(s)	284
BseSI	GKGCMC	1 cut(s)	98
BseXI	GCAGC	8 cut(s)	25, 115, 146, 187, 1047, 1077, 1183, 2045
BseYI	CCCAGC	2 cut(s)	839, 2360
BshFI	GGCC	4 cut(s)	57, 306, 1412, 2242
BshNI	GGYRCC	1 cut(s)	2278
BsiHKAI	GWGCWC	2 cut(s)	768, 885
BsiSI	CCGG	2 cut(s)	1764, 2324
BslFI	GGGAC	2 cut(s)	928, 1438
BslI	CCNNNNNNNGG	2 cut(s)	932, 1763
BsmAI	GTCTC	6 cut(s)	378, 1072, 1696, 1724, 1835, 2129
BsmBI	CGTCTC	1 cut(s)	1835
BsmFI	GGGAC	2 cut(s)	928, 1438
BsmI	GAATGC	4 cut(s)	225, 315, 703, 2352
BsnI	GGCC	4 cut(s)	57, 306, 1412, 2242
Bso31I	GGTCTC	2 cut(s)	378, 1724
Bsp119I	TTCGAA	1 cut(s)	740
Bsp1286I	GDGCHC	3 cut(s)	98, 768, 885
Bsp143I	GATC	8 cut(s)	178, 855, 1039, 1099, 1261, 1485, 1558, 1999
BspACI	CCGC	6 cut(s)	126, 132, 204, 1112, 1292, 1773
BspANI	GGCC	4 cut(s)	57, 306, 1412, 2242
BspCNI	CTCAG	6 cut(s)	1032, 1207, 1720, 1786, 1938, 2161
BspLI	GGNNCC	2 cut(s)	1139, 2280
BspMAI	CTGCAG	1 cut(s)	178
BspPI	GGATC	1 cut(s)	2007
BspQI	GCTCTTC	1 cut(s)	1665
BspT104I	TTCGAA	1 cut(s)	740
BspT107I	GGYRCC	1 cut(s)	2278
BspTNI	GGTCTC	2 cut(s)	378, 1724
BsrDI	GCAATG	1 cut(s)	822
BsrFI	RCCGGY	1 cut(s)	1763
BsrI	ACTGG	3 cut(s)	195, 1051, 1922
BssAI	RCCGGY	1 cut(s)	1763
BssECI	CCNNGG	4 cut(s)	300, 708, 2324, 2416
BssMI	GATC	8 cut(s)	178, 855, 1039, 1099, 1261, 1485, 1558, 1999
BssNAI	GTATAC	1 cut(s)	794
BssNI	GRCGYC	2 cut(s)	1599, 2279
BssT1I	CCWWGG	2 cut(s)	300, 2416
Bst1107I	GTATAC	1 cut(s)	794
Bst2UI	CCWGG	1 cut(s)	1414
Bst4CI	ACNGT	5 cut(s)	763, 983, 1429, 1505, 2195
Bst6I	CTCTTC	7 cut(s)	341, 426, 504, 1113, 1611, 1665, 1741
BstACI	GRCGYC	2 cut(s)	1599, 2279
BstBI	TTCGAA	1 cut(s)	740
BstC8I	GCNNGC	3 cut(s)	21, 55, 2393
BstDSI	CCRYGG	1 cut(s)	708
BstF5I	GGATG	6 cut(s)	1165, 1198, 1596, 1874, 2019, 2356
BstH2I	RGCGCY	1 cut(s)	2282
BstHHI	GCGC	4 cut(s)	339, 1065, 1133, 2281
BstKTI	GATC	8 cut(s)	181, 858, 1042, 1102, 1264, 1488, 1561, 2002
BstMAI	GTCTC	6 cut(s)	378, 1072, 1696, 1724, 1835, 2129
BstMBI	GATC	8 cut(s)	178, 855, 1039, 1099, 1261, 1485, 1558, 1999
BstMWI	GCNNNNNNNGC	7 cut(s)	35, 134, 200, 1311, 1355, 1658, 1935
BstNI	CCWGG	1 cut(s)	1414
BstNSI	RCATGY	2 cut(s)	868, 1649
BstSCI	CCNGG	2 cut(s)	1412, 2323
BstSFI	CTRYAG	2 cut(s)	174, 1397
BstSLI	GKGCMC	1 cut(s)	98
BstV1I	GCAGC	8 cut(s)	25, 115, 146, 187, 1047, 1077, 1183, 2045
BstV2I	GAAGAC	3 cut(s)	301, 914, 2339
BstX2I	RGATCY	1 cut(s)	1999
BstXI	CCANNNNNNTGG	1 cut(s)	1841
BstYI	RGATCY	1 cut(s)	1999
BstZ17I	GTATAC	1 cut(s)	794
BsuRI	GGCC	4 cut(s)	57, 306, 1412, 2242
BtgI	CCRYGG	1 cut(s)	708
BtsCI	GGATG	6 cut(s)	1165, 1198, 1596, 1874, 2019, 2356
BtsI	GCAGTG	1 cut(s)	48
BtsIMutI	CAGTG	5 cut(s)	48, 202, 768, 1791, 2200
Cac8I	GCNNGC	3 cut(s)	21, 55, 2393
CfoI	GCGC	4 cut(s)	339, 1065, 1133, 2281
Cfr10I	RCCGGY	1 cut(s)	1763
Cfr13I	GGNCC	4 cut(s)	304, 1138, 1219, 2241
CseI	GACGC	2 cut(s)	506, 1817
Csp6I	GTAC	8 cut(s)	71, 164, 590, 721, 1567, 1872, 2207, 2413
CviQI	GTAC	8 cut(s)	71, 164, 590, 721, 1567, 1872, 2207, 2413
DinI	GGCGCC	1 cut(s)	2280
DpnI	GATC	8 cut(s)	180, 857, 1041, 1101, 1263, 1487, 1560, 2001
DpnII	GATC	8 cut(s)	178, 855, 1039, 1099, 1261, 1485, 1558, 1999
DraI	TTTAAA	1 cut(s)	2403
Eam1104I	CTCTTC	7 cut(s)	341, 426, 504, 1113, 1611, 1665, 1741
EarI	CTCTTC	7 cut(s)	341, 426, 504, 1113, 1611, 1665, 1741
Eco130I	CCWWGG	2 cut(s)	300, 2416
Eco147I	AGGCCT	1 cut(s)	1412
Eco31I	GGTCTC	2 cut(s)	378, 1724
Eco47I	GGWCC	2 cut(s)	1138, 1219
Eco57I	CTGAAG	4 cut(s)	528, 629, 737, 2417
EcoO109I	RGGNCCY	1 cut(s)	1219
EcoRII	CCWGG	1 cut(s)	1412
EcoT14I	CCWWGG	2 cut(s)	300, 2416
EgeI	GGCGCC	1 cut(s)	2280
EheI	GGCGCC	1 cut(s)	2280
ErhI	CCWWGG	2 cut(s)	300, 2416
Esp3I	CGTCTC	1 cut(s)	1835
FalI	AAGNNNNNCTT	2 cut(s)	647, 679
FaqI	GGGAC	2 cut(s)	928, 1438
FauI	CCCGC	1 cut(s)	1105
FbaI	TGATCA	4 cut(s)	855, 1039, 1261, 1558
FblI	GTMKAC	4 cut(s)	793, 834, 1396, 2102
FokI	GGATG	6 cut(s)	1172, 1205, 1603, 1861, 2006, 2343
FspBI	CTAG	3 cut(s)	782, 1025, 2003
FspI	TGCGCA	2 cut(s)	338, 1064
GlaI	GCGC	4 cut(s)	338, 1064, 1132, 2280
GsaI	CCCAGC	2 cut(s)	843, 2364
HaeII	RGCGCY	1 cut(s)	2282
HaeIII	GGCC	4 cut(s)	57, 306, 1412, 2242
HapII	CCGG	2 cut(s)	1764, 2324
HgaI	GACGC	2 cut(s)	506, 1817
HhaI	GCGC	4 cut(s)	339, 1065, 1133, 2281
Hin1I	GRCGYC	2 cut(s)	1599, 2279
Hin6I	GCGC	4 cut(s)	337, 1063, 1131, 2279
HinP1I	GCGC	4 cut(s)	337, 1063, 1131, 2279
HpaII	CCGG	2 cut(s)	1764, 2324
HphI	GGTGA	2 cut(s)	1127, 2239
Hpy166II	GTNNAC	9 cut(s)	652, 759, 794, 835, 1363, 1397, 1969, 2103, 2207
Hpy8I	GTNNAC	9 cut(s)	652, 759, 794, 835, 1363, 1397, 1969, 2103, 2207
HpyAV	CCTTC	5 cut(s)	349, 604, 1366, 1462, 2367
HpyCH4III	ACNGT	5 cut(s)	763, 983, 1429, 1505, 2195
HpyCH4IV	ACGT	3 cut(s)	1332, 1599, 2071
HpyF10VI	GCNNNNNNNGC	7 cut(s)	35, 134, 200, 1311, 1355, 1658, 1935
HpySE526I	ACGT	3 cut(s)	1332, 1599, 2071
Hsp92I	GRCGYC	2 cut(s)	1599, 2279
HspAI	GCGC	4 cut(s)	337, 1063, 1131, 2279
KasI	GGCGCC	1 cut(s)	2278
Ksp22I	TGATCA	4 cut(s)	855, 1039, 1261, 1558
Kzo9I	GATC	8 cut(s)	178, 855, 1039, 1099, 1261, 1485, 1558, 1999
LguI	GCTCTTC	1 cut(s)	1665
LmnI	GCTCC	1 cut(s)	1810
Lsp1109I	GCAGC	8 cut(s)	25, 115, 146, 187, 1047, 1077, 1183, 2045
LweI	GCATC	8 cut(s)	418, 469, 504, 523, 775, 1183, 1581, 2028
MaeI	CTAG	3 cut(s)	782, 1025, 2003
MaeII	ACGT	3 cut(s)	1332, 1599, 2071
MaeIII	GTNAC	2 cut(s)	118, 2235
MalI	GATC	8 cut(s)	180, 857, 1041, 1101, 1263, 1487, 1560, 2001
MboI	GATC	8 cut(s)	178, 855, 1039, 1099, 1261, 1485, 1558, 1999
MfeI	CAATTG	1 cut(s)	2248
MflI	RGATCY	1 cut(s)	1999
MhlI	GDGCHC	3 cut(s)	98, 768, 885
Mly113I	GGCGCC	1 cut(s)	2279
MlyI	GAGTC	5 cut(s)	98, 281, 441, 1487, 2243
MmeI	TCCRAC	1 cut(s)	1858
MroXI	GAANNNNTTC	1 cut(s)	420
MseI	TTAA	9 cut(s)	473, 770, 809, 953, 1812, 1821, 1974, 2174, 2402
MslI	CAYNNNNRTG	3 cut(s)	285, 876, 2055
MspA1I	CMGCKG	5 cut(s)	128, 137, 206, 1068, 1775
MspI	CCGG	2 cut(s)	1764, 2324
MspR9I	CCNGG	2 cut(s)	1414, 2325
MunI	CAATTG	1 cut(s)	2248
Mva1269I	GAATGC	4 cut(s)	225, 315, 703, 2352
MvaI	CCWGG	1 cut(s)	1414
MwoI	GCNNNNNNNGC	7 cut(s)	35, 134, 200, 1311, 1355, 1658, 1935
NarI	GGCGCC	1 cut(s)	2279
NciI	CCSGG	1 cut(s)	2325
NdeII	GATC	8 cut(s)	178, 855, 1039, 1099, 1261, 1485, 1558, 1999
NlaIV	GGNNCC	2 cut(s)	1139, 2280
NmeAIII	GCCGAG	2 cut(s)	1984, 2307
NmuCI	GTSAC	1 cut(s)	2235
NsbI	TGCGCA	2 cut(s)	338, 1064
NspI	RCATGY	2 cut(s)	868, 1649
NspV	TTCGAA	1 cut(s)	740
PceI	AGGCCT	1 cut(s)	1412
PciSI	GCTCTTC	1 cut(s)	1665
PctI	GAATGC	4 cut(s)	225, 315, 703, 2352
PdmI	GAANNNNTTC	1 cut(s)	420
PfeI	GAWTC	7 cut(s)	170, 497, 742, 1028, 1300, 1778, 2095
PleI	GAGTC	5 cut(s)	97, 280, 441, 1486, 2242
PluTI	GGCGCC	1 cut(s)	2282
PpsI	GAGTC	5 cut(s)	97, 280, 441, 1486, 2242
PpuMI	RGGWCCY	1 cut(s)	1219
PshBI	ATTAAT	2 cut(s)	953, 2174
Psp5II	RGGWCCY	1 cut(s)	1219
Psp6I	CCWGG	1 cut(s)	1412
PspFI	CCCAGC	2 cut(s)	839, 2360
PspGI	CCWGG	1 cut(s)	1412
PspN4I	GGNNCC	2 cut(s)	1139, 2280
PspPI	GGNCC	4 cut(s)	304, 1138, 1219, 2241
PspPPI	RGGWCCY	1 cut(s)	1219
PsrI	GAACNNNNNNTAC	2 cut(s)	1647, 1679
PstI	CTGCAG	1 cut(s)	178
PsuI	RGATCY	1 cut(s)	1999
PvuII	CAGCTG	2 cut(s)	137, 1068
RsaI	GTAC	8 cut(s)	72, 165, 591, 722, 1568, 1873, 2208, 2414
RsaNI	GTAC	8 cut(s)	71, 164, 590, 721, 1567, 1872, 2207, 2413
RseI	CAYNNNNRTG	3 cut(s)	285, 876, 2055
SapI	GCTCTTC	1 cut(s)	1665
SaqAI	TTAA	9 cut(s)	473, 770, 809, 953, 1812, 1821, 1974, 2174, 2402
Sau3AI	GATC	8 cut(s)	178, 855, 1039, 1099, 1261, 1485, 1558, 1999
Sau96I	GGNCC	4 cut(s)	304, 1138, 1219, 2241
ScaI	AGTACT	1 cut(s)	591
SchI	GAGTC	5 cut(s)	98, 281, 441, 1487, 2243
ScrFI	CCNGG	2 cut(s)	1414, 2325
SduI	GDGCHC	3 cut(s)	98, 768, 885
SfaNI	GCATC	8 cut(s)	418, 469, 504, 523, 775, 1183, 1581, 2028
SfcI	CTRYAG	2 cut(s)	174, 1397
SfoI	GGCGCC	1 cut(s)	2280
SfuI	TTCGAA	1 cut(s)	740
SinI	GGWCC	2 cut(s)	1138, 1219
SmiMI	CAYNNNNRTG	3 cut(s)	285, 876, 2055
SmlI	CTYRAG	3 cut(s)	317, 1202, 2344
SmoI	CTYRAG	3 cut(s)	317, 1202, 2344
SseBI	AGGCCT	1 cut(s)	1412
SsiI	CCGC	6 cut(s)	126, 132, 204, 1112, 1292, 1773
SspDI	GGCGCC	1 cut(s)	2278
SspI	AATATT	1 cut(s)	939
SspMI	CTAG	3 cut(s)	782, 1025, 2003
StuI	AGGCCT	1 cut(s)	1412
StyD4I	CCNGG	2 cut(s)	1412, 2323
StyI	CCWWGG	2 cut(s)	300, 2416
TaaI	ACNGT	5 cut(s)	763, 983, 1429, 1505, 2195
TaiI	ACGT	3 cut(s)	1335, 1602, 2074
TaqI	TCGA	7 cut(s)	382, 688, 740, 969, 1001, 1257, 1914
TatI	WGTACW	4 cut(s)	163, 589, 720, 2206
TauI	GCSGC	2 cut(s)	134, 206
TfiI	GAWTC	7 cut(s)	170, 497, 742, 1028, 1300, 1778, 2095
Tru1I	TTAA	9 cut(s)	473, 770, 809, 953, 1812, 1821, 1974, 2174, 2402
Tru9I	TTAA	9 cut(s)	473, 770, 809, 953, 1812, 1821, 1974, 2174, 2402
TscAI	CASTG	5 cut(s)	55, 202, 768, 1798, 2200
TseFI	GTSAC	1 cut(s)	2235
TseI	GCWGC	8 cut(s)	38, 128, 134, 200, 1060, 1065, 1196, 2033
Tsp45I	GTSAC	1 cut(s)	2235
TspGWI	ACGGA	3 cut(s)	1526, 2088, 2428
TspRI	CASTG	5 cut(s)	55, 202, 768, 1798, 2200
VpaK11BI	GGWCC	2 cut(s)	1138, 1219
VspI	ATTAAT	2 cut(s)	953, 2174
XapI	RAATTY	6 cut(s)	250, 986, 1045, 1524, 1694, 2184
XbaI	TCTAGA	1 cut(s)	1024
XceI	RCATGY	2 cut(s)	868, 1649
XmiI	GTMKAC	4 cut(s)	793, 834, 1396, 2102
XmnI	GAANNNNTTC	1 cut(s)	420
XspI	CTAG	3 cut(s)	782, 1025, 2003
ZraI	GACGTC	1 cut(s)	1600
ZrmI	AGTACT	1 cut(s)	591

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.