Type II intron maturase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G74350 |
| fragaria_vesca | FvH4_7g02870 |
| malus_domestica | MD02G1287300.v1.1 |
| prunus_persica | Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 |
| pyrus_communis | pycom02g24350 |
| rosa_chinensis | RchiOBHm_Chr1g0323821 |
| rosa_laevigata | RLG00000030266 |
| rosa_roxburghii | Rroxscaffold_4G00326400 |
| rosa_rugosa | Rorug01G0039700 |
| rosa_samantha | Rh1AG057100 Rh1BG048100 Rh1DG062200 |
| rosa_wichuraiana | Rw1G004880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 467, 1193 |
| AccB1I | GGYRCC | 1 cut(s) | 1433 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1883 |
| AccI | GTMKAC | 1 cut(s) | 1516 |
| AciI | CCGC | 5 cut(s) | 21, 66, 1423, 1854, 2316 |
| AclWI | GGATC | 3 cut(s) | 979, 1414, 1427 |
| AcuI | CTGAAG | 4 cut(s) | 657, 758, 1721, 1809 |
| AdeI | CACNNNGTG | 1 cut(s) | 2405 |
| AfaI | GTAC | 6 cut(s) | 851, 1011, 1688, 1694, 1993, 2389 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1061, 1185, 1883 |
| AflIII | ACRYGT | 1 cut(s) | 1973 |
| AjnI | CCWGG | 4 cut(s) | 428, 1153, 2443, 2573 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 981, 1013, 1870, 1902 |
| Alw21I | GWGCWC | 1 cut(s) | 2172 |
| Alw26I | GTCTC | 4 cut(s) | 459, 507, 857, 1844 |
| Alw44I | GTGCAC | 1 cut(s) | 2168 |
| AlwI | GGATC | 3 cut(s) | 979, 1414, 1427 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 23, 1301 |
| AoxI | GGCC | 2 cut(s) | 264, 2571 |
| ApaLI | GTGCAC | 1 cut(s) | 2168 |
| ApeKI | GCWGC | 6 cut(s) | 117, 170, 1194, 1316, 1733, 2153 |
| AseI | ATTAAT | 3 cut(s) | 75, 342, 1082 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 280, 549 |
| AspLEI | GCGC | 4 cut(s) | 468, 1194, 1870, 1950 |
| AspS9I | GGNCC | 2 cut(s) | 265, 2571 |
| AsuHPI | GGTGA | 3 cut(s) | 229, 493, 2359 |
| AxyI | CCTNAGG | 1 cut(s) | 2268 |
| BaeGI | GKGCMC | 1 cut(s) | 2172 |
| BamHI | GGATCC | 1 cut(s) | 1419 |
| BanI | GGYRCC | 1 cut(s) | 1433 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 476, 508 |
| BbsI | GAAGAC | 4 cut(s) | 430, 969, 1043, 2459 |
| Bbv12I | GWGCWC | 1 cut(s) | 2172 |
| BbvI | GCAGC | 6 cut(s) | 129, 157, 1206, 1328, 1745, 2165 |
| BccI | CCATC | 7 cut(s) | 263, 276, 764, 940, 1973, 2064, 2239 |
| BceAI | ACGGC | 1 cut(s) | 2043 |
| BciT130I | CCWGG | 4 cut(s) | 430, 1155, 2445, 2575 |
| BclI | TGATCA | 3 cut(s) | 1168, 1381, 1678 |
| BcoDI | GTCTC | 4 cut(s) | 459, 507, 857, 1844 |
| BfaI | CTAG | 8 cut(s) | 870, 911, 969, 1185, 2123, 2150, 2228, 2336 |
| BfmI | CTRYAG | 1 cut(s) | 837 |
| BfoI | RGCGCY | 1 cut(s) | 1951 |
| BglII | AGATCT | 1 cut(s) | 1628 |
| BisI | GCNGC | 8 cut(s) | 21, 118, 171, 1195, 1317, 1734, 2154, 2317 |
| BlsI | GCNGC | 8 cut(s) | 22, 119, 172, 1196, 1318, 1735, 2155, 2318 |
| Bme1390I | CCNGG | 4 cut(s) | 430, 1155, 2445, 2575 |
| BmgT120I | GGNCC | 2 cut(s) | 265, 2571 |
| BmiI | GGNNCC | 4 cut(s) | 1211, 1421, 1435, 2572 |
| BmrFI | CCNGG | 4 cut(s) | 430, 1155, 2445, 2575 |
| BmrI | ACTGGG | 2 cut(s) | 1174, 2466 |
| BmsI | GCATC | 5 cut(s) | 547, 904, 1303, 1701, 2148 |
| BmuI | ACTGGG | 2 cut(s) | 1174, 2466 |
| BpiI | GAAGAC | 4 cut(s) | 430, 969, 1043, 2459 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1841, 1873 |
| BpmI | CTGGAG | 2 cut(s) | 351, 2379 |
| BpuEI | CTTGAG | 2 cut(s) | 431, 2449 |
| BsaI | GGTCTC | 3 cut(s) | 459, 507, 1844 |
| BsaJI | CCNNGG | 1 cut(s) | 428 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1061, 1185, 1883 |
| Bse1I | ACTGG | 6 cut(s) | 103, 219, 1180, 2042, 2353, 2461 |
| Bse21I | CCTNAGG | 1 cut(s) | 2268 |
| Bse3DI | GCAATG | 1 cut(s) | 531 |
| BseBI | CCWGG | 4 cut(s) | 430, 1155, 2445, 2575 |
| BseDI | CCNNGG | 1 cut(s) | 428 |
| BseGI | GGATG | 5 cut(s) | 1285, 1318, 1716, 2139, 2476 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1061, 1185, 1883 |
| BseMI | GCAATG | 1 cut(s) | 531 |
| BseMII | CTCAG | 6 cut(s) | 1326, 1628, 1839, 1905, 2169, 2282 |
| BseNI | ACTGG | 6 cut(s) | 103, 219, 1180, 2042, 2353, 2461 |
| BseRI | GAGGAG | 1 cut(s) | 965 |
| BseSI | GKGCMC | 1 cut(s) | 2172 |
| BseXI | GCAGC | 6 cut(s) | 129, 157, 1206, 1328, 1745, 2165 |
| BseYI | CCCAGC | 1 cut(s) | 2480 |
| BsgI | GTGCAG | 1 cut(s) | 1257 |
| BshFI | GGCC | 2 cut(s) | 266, 2573 |
| BshNI | GGYRCC | 1 cut(s) | 1433 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2172 |
| BslFI | GGGAC | 3 cut(s) | 237, 1057, 1162 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1061, 1185, 1883 |
| BsmAI | GTCTC | 4 cut(s) | 459, 507, 857, 1844 |
| BsmFI | GGGAC | 3 cut(s) | 237, 1057, 1162 |
| BsmI | GAATGC | 1 cut(s) | 832 |
| BsnI | GGCC | 2 cut(s) | 266, 2573 |
| Bso31I | GGTCTC | 3 cut(s) | 459, 507, 1844 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2172 |
| Bsp1407I | TGTACA | 1 cut(s) | 2387 |
| BspACI | CCGC | 5 cut(s) | 21, 66, 1423, 1854, 2316 |
| BspANI | GGCC | 2 cut(s) | 266, 2573 |
| BspCNI | CTCAG | 6 cut(s) | 1327, 1629, 1840, 1906, 2170, 2281 |
| BspLI | GGNNCC | 4 cut(s) | 1211, 1421, 1435, 2572 |
| BspPI | GGATC | 3 cut(s) | 979, 1414, 1427 |
| BspQI | GCTCTTC | 2 cut(s) | 271, 633 |
| BspT107I | GGYRCC | 1 cut(s) | 1433 |
| BspTNI | GGTCTC | 3 cut(s) | 459, 507, 1844 |
| BsrDI | GCAATG | 1 cut(s) | 531 |
| BsrGI | TGTACA | 1 cut(s) | 2387 |
| BsrI | ACTGG | 6 cut(s) | 103, 219, 1180, 2042, 2353, 2461 |
| BssECI | CCNNGG | 1 cut(s) | 428 |
| Bst2UI | CCWGG | 4 cut(s) | 430, 1155, 2445, 2575 |
| Bst4CI | ACNGT | 5 cut(s) | 262, 319, 1112, 1549, 2192 |
| Bst6I | CTCTTC | 5 cut(s) | 271, 470, 555, 633, 1239 |
| BstAUI | TGTACA | 1 cut(s) | 2387 |
| BstC8I | GCNNGC | 3 cut(s) | 34, 187, 2513 |
| BstEII | GGTNACC | 2 cut(s) | 812, 1982 |
| BstF5I | GGATG | 5 cut(s) | 1285, 1318, 1716, 2139, 2476 |
| BstH2I | RGCGCY | 1 cut(s) | 1951 |
| BstHHI | GCGC | 4 cut(s) | 468, 1194, 1870, 1950 |
| BstMAI | GTCTC | 4 cut(s) | 459, 507, 857, 1844 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 29, 42, 1431, 1475, 1733, 1778 |
| BstNI | CCWGG | 4 cut(s) | 430, 1155, 2445, 2575 |
| BstNSI | RCATGY | 5 cut(s) | 997, 1699, 1829, 1977, 1998 |
| BstPI | GGTNACC | 2 cut(s) | 812, 1982 |
| BstSCI | CCNGG | 4 cut(s) | 428, 1153, 2443, 2573 |
| BstSFI | CTRYAG | 1 cut(s) | 837 |
| BstSLI | GKGCMC | 1 cut(s) | 2172 |
| BstV1I | GCAGC | 6 cut(s) | 129, 157, 1206, 1328, 1745, 2165 |
| BstV2I | GAAGAC | 4 cut(s) | 430, 969, 1043, 2459 |
| BstX2I | RGATCY | 2 cut(s) | 1419, 1628 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 262 |
| BstYI | RGATCY | 2 cut(s) | 1419, 1628 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2268 |
| BsuRI | GGCC | 2 cut(s) | 266, 2573 |
| BtsCI | GGATG | 5 cut(s) | 1285, 1318, 1716, 2139, 2476 |
| BtsI | GCAGTG | 3 cut(s) | 52, 153, 180 |
| BtsIMutI | CAGTG | 8 cut(s) | 52, 153, 180, 212, 267, 948, 1911, 2199 |
| Cac8I | GCNNGC | 3 cut(s) | 34, 187, 2513 |
| CaiI | CAGNNNCTG | 2 cut(s) | 23, 1301 |
| CfoI | GCGC | 4 cut(s) | 468, 1194, 1870, 1950 |
| Cfr13I | GGNCC | 2 cut(s) | 265, 2571 |
| Csp6I | GTAC | 6 cut(s) | 850, 1010, 1687, 1693, 1992, 2388 |
| CviQI | GTAC | 6 cut(s) | 850, 1010, 1687, 1693, 1992, 2388 |
| DraIII | CACNNNGTG | 1 cut(s) | 2405 |
| Eam1104I | CTCTTC | 5 cut(s) | 271, 470, 555, 633, 1239 |
| EarI | CTCTTC | 5 cut(s) | 271, 470, 555, 633, 1239 |
| Eco31I | GGTCTC | 3 cut(s) | 459, 507, 1844 |
| Eco32I | GATATC | 1 cut(s) | 939 |
| Eco57I | CTGAAG | 4 cut(s) | 657, 758, 1721, 1809 |
| Eco81I | CCTNAGG | 1 cut(s) | 2268 |
| Eco91I | GGTNACC | 2 cut(s) | 812, 1982 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2571 |
| EcoO65I | GGTNACC | 2 cut(s) | 812, 1982 |
| EcoRII | CCWGG | 4 cut(s) | 428, 1153, 2443, 2573 |
| EcoRV | GATATC | 1 cut(s) | 939 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 776, 808, 2504, 2536 |
| FaqI | GGGAC | 3 cut(s) | 237, 1057, 1162 |
| FbaI | TGATCA | 3 cut(s) | 1168, 1381, 1678 |
| FblI | GTMKAC | 1 cut(s) | 1516 |
| Fnu4HI | GCNGC | 8 cut(s) | 21, 118, 171, 1195, 1317, 1734, 2154, 2317 |
| FokI | GGATG | 5 cut(s) | 1292, 1325, 1723, 2126, 2463 |
| Fsp4HI | GCNGC | 8 cut(s) | 21, 118, 171, 1195, 1317, 1734, 2154, 2317 |
| FspBI | CTAG | 8 cut(s) | 870, 911, 969, 1185, 2123, 2150, 2228, 2336 |
| FspI | TGCGCA | 2 cut(s) | 467, 1193 |
| GlaI | GCGC | 4 cut(s) | 467, 1193, 1869, 1949 |
| GluI | GCNGC | 8 cut(s) | 21, 118, 171, 1195, 1317, 1734, 2154, 2317 |
| GsaI | CCCAGC | 1 cut(s) | 2484 |
| GsuI | CTGGAG | 2 cut(s) | 351, 2379 |
| HaeII | RGCGCY | 1 cut(s) | 1951 |
| HaeIII | GGCC | 2 cut(s) | 266, 2573 |
| HhaI | GCGC | 4 cut(s) | 468, 1194, 1870, 1950 |
| Hin6I | GCGC | 4 cut(s) | 466, 1192, 1868, 1948 |
| HinP1I | GCGC | 4 cut(s) | 466, 1192, 1868, 1948 |
| HinfI | GANTC | 8 cut(s) | 398, 576, 733, 1257, 1538, 1598, 1639, 1898 |
| HphI | GGTGA | 3 cut(s) | 229, 493, 2359 |
| Hpy166II | GTNNAC | 5 cut(s) | 781, 1483, 1517, 2170, 2388 |
| Hpy8I | GTNNAC | 5 cut(s) | 781, 1483, 1517, 2170, 2388 |
| HpyAV | CCTTC | 5 cut(s) | 193, 478, 688, 733, 1582 |
| HpyCH4III | ACNGT | 5 cut(s) | 262, 319, 1112, 1549, 2192 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 29, 42, 1431, 1475, 1733, 1778 |
| HspAI | GCGC | 4 cut(s) | 466, 1192, 1868, 1948 |
| Ksp22I | TGATCA | 3 cut(s) | 1168, 1381, 1678 |
| LguI | GCTCTTC | 2 cut(s) | 271, 633 |
| LmnI | GCTCC | 4 cut(s) | 432, 1930, 2003, 2398 |
| Lsp1109I | GCAGC | 6 cut(s) | 129, 157, 1206, 1328, 1745, 2165 |
| LweI | GCATC | 5 cut(s) | 547, 904, 1303, 1701, 2148 |
| MaeI | CTAG | 8 cut(s) | 870, 911, 969, 1185, 2123, 2150, 2228, 2336 |
| MaeIII | GTNAC | 4 cut(s) | 812, 1909, 1982, 2355 |
| MfeI | CAATTG | 1 cut(s) | 2368 |
| MflI | RGATCY | 2 cut(s) | 1419, 1628 |
| MhlI | GDGCHC | 1 cut(s) | 2172 |
| MlyI | GAGTC | 4 cut(s) | 570, 1266, 1648, 1892 |
| MroXI | GAANNNNTTC | 2 cut(s) | 280, 549 |
| MslI | CAYNNNNRTG | 3 cut(s) | 260, 411, 1005 |
| MspA1I | CMGCKG | 3 cut(s) | 23, 1197, 2316 |
| MspR9I | CCNGG | 4 cut(s) | 430, 1155, 2445, 2575 |
| MunI | CAATTG | 1 cut(s) | 2368 |
| Mva1269I | GAATGC | 1 cut(s) | 832 |
| MvaI | CCWGG | 4 cut(s) | 430, 1155, 2445, 2575 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 29, 42, 1431, 1475, 1733, 1778 |
| NlaIV | GGNNCC | 4 cut(s) | 1211, 1421, 1435, 2572 |
| NmuCI | GTSAC | 2 cut(s) | 1909, 2355 |
| NsbI | TGCGCA | 2 cut(s) | 467, 1193 |
| NspI | RCATGY | 5 cut(s) | 997, 1699, 1829, 1977, 1998 |
| PciI | ACATGT | 1 cut(s) | 1973 |
| PciSI | GCTCTTC | 2 cut(s) | 271, 633 |
| PctI | GAATGC | 1 cut(s) | 832 |
| PdmI | GAANNNNTTC | 2 cut(s) | 280, 549 |
| PfeI | GAWTC | 4 cut(s) | 398, 733, 1538, 1598 |
| PflFI | GACNNNGTC | 1 cut(s) | 1901 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1883 |
| PkrI | GCNGC | 8 cut(s) | 22, 119, 172, 1196, 1318, 1735, 2155, 2318 |
| PleI | GAGTC | 4 cut(s) | 570, 1265, 1647, 1892 |
| PpsI | GAGTC | 4 cut(s) | 570, 1265, 1647, 1892 |
| PscI | ACATGT | 1 cut(s) | 1973 |
| PshBI | ATTAAT | 3 cut(s) | 75, 342, 1082 |
| Psp6I | CCWGG | 4 cut(s) | 428, 1153, 2443, 2573 |
| PspEI | GGTNACC | 2 cut(s) | 812, 1982 |
| PspFI | CCCAGC | 1 cut(s) | 2480 |
| PspGI | CCWGG | 4 cut(s) | 428, 1153, 2443, 2573 |
| PspN4I | GGNNCC | 4 cut(s) | 1211, 1421, 1435, 2572 |
| PspPI | GGNCC | 2 cut(s) | 265, 2571 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1767, 1799 |
| PstNI | CAGNNNCTG | 2 cut(s) | 23, 1301 |
| PsuI | RGATCY | 2 cut(s) | 1419, 1628 |
| PsyI | GACNNNGTC | 1 cut(s) | 1901 |
| PvuII | CAGCTG | 1 cut(s) | 1197 |
| RsaI | GTAC | 6 cut(s) | 851, 1011, 1688, 1694, 1993, 2389 |
| RsaNI | GTAC | 6 cut(s) | 850, 1010, 1687, 1693, 1992, 2388 |
| RseI | CAYNNNNRTG | 3 cut(s) | 260, 411, 1005 |
| SapI | GCTCTTC | 2 cut(s) | 271, 633 |
| SatI | GCNGC | 8 cut(s) | 21, 118, 171, 1195, 1317, 1734, 2154, 2317 |
| Sau96I | GGNCC | 2 cut(s) | 265, 2571 |
| SchI | GAGTC | 4 cut(s) | 570, 1266, 1648, 1892 |
| ScrFI | CCNGG | 4 cut(s) | 430, 1155, 2445, 2575 |
| SduI | GDGCHC | 1 cut(s) | 2172 |
| SfaNI | GCATC | 5 cut(s) | 547, 904, 1303, 1701, 2148 |
| SfcI | CTRYAG | 1 cut(s) | 837 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 260, 411, 1005 |
| SmlI | CTYRAG | 2 cut(s) | 446, 2464 |
| SmoI | CTYRAG | 2 cut(s) | 446, 2464 |
| SsiI | CCGC | 5 cut(s) | 21, 66, 1423, 1854, 2316 |
| SspI | AATATT | 2 cut(s) | 589, 1090 |
| SspMI | CTAG | 8 cut(s) | 870, 911, 969, 1185, 2123, 2150, 2228, 2336 |
| StyD4I | CCNGG | 4 cut(s) | 428, 1153, 2443, 2573 |
| TaaI | ACNGT | 5 cut(s) | 262, 319, 1112, 1549, 2192 |
| TaqI | TCGA | 4 cut(s) | 224, 511, 1020, 2034 |
| TatI | WGTACW | 4 cut(s) | 849, 1009, 1692, 2387 |
| TauI | GCSGC | 2 cut(s) | 23, 2319 |
| TfiI | GAWTC | 4 cut(s) | 398, 733, 1538, 1598 |
| TscAI | CASTG | 8 cut(s) | 52, 160, 187, 219, 267, 948, 1918, 2206 |
| TseFI | GTSAC | 2 cut(s) | 1909, 2355 |
| TseI | GCWGC | 6 cut(s) | 117, 170, 1194, 1316, 1733, 2153 |
| Tsp45I | GTSAC | 2 cut(s) | 1909, 2355 |
| TspGWI | ACGGA | 2 cut(s) | 1646, 2509 |
| TspRI | CASTG | 8 cut(s) | 52, 160, 187, 219, 267, 948, 1918, 2206 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1901 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1883 |
| VneI | GTGCAC | 1 cut(s) | 2168 |
| VspI | ATTAAT | 3 cut(s) | 75, 342, 1082 |
| XceI | RCATGY | 5 cut(s) | 997, 1699, 1829, 1977, 1998 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 436 |
| XmiI | GTMKAC | 1 cut(s) | 1516 |
| XmnI | GAANNNNTTC | 2 cut(s) | 280, 549 |
| XspI | CTAG | 8 cut(s) | 870, 911, 969, 1185, 2123, 2150, 2228, 2336 |