Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0008364

Physical Location & Seq

Genomic Coordinates Reverse (-)

9316558 .. 9319496

Gene Structure 2939 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G004880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2499 bp

ATGACTGGTATCTGGATCCCTTTATGTAGTAGCAGCAACCCAATTTCTATGTCTTATGACAAAAGGCTCACTGCTGTCAGAAAAGCTGCCTCTCTCACTGCTCGCCTTTGTGAAAAGGTGCAAAAGACACTGGTGAAGTCGAACACTTCTTCAAAATCAGATAAAAGTCCCATCACAGTGGCCCATCATGGAAGAGCTTCCGAAAGAATACAAGAATTTGCAGATCATTCTACTGTCGCTACTGCTGGAGATGATATTAATAACAGCATTTGTAAAATGAAATTGGCAGAGAACTTAGCCTGGCTTGTTGATGAATCTTCTCATATGGATGAGAGAGGAAGACCCAGGAGCAGAATGGAACTCAAGAGGTCTGTTGAACTGCGCATTAAGAAGAGGGTGAAGGAACAATACCTCAATGGGAAGTTTAGAGACCTAATGGCAAAAGTCATTGCCAATCCAGAAACTCTTCAAGATGCTTATGATTGTATCAGACTCAACTCCAATATTGATGTAGTGTTAAATGATGAGAAAACTTCTTTTGGTTCTTTGGCTGAAGAGCTGTATCTTGGGAATTTTGATGTTAATGCTAATACCTTCTCTATCTCAACAAAGAATGCAAGGAAAGATGTTTTAGTGCTTCCCAATGTGAATCTGAAGGTCATTCAGGAAGCCATCAGAATTGTATTAGAAGTTGTTTACAAGCCCCACTTCTCTAAAATTTCACATGGTTACCGAAGTGGGAGGGGGCATTCTACAGCTTTGAAGTACATAAGCAAGGAGACTGCTAGTTCTGATTGGTGGTTTATATTGCTCATTAACAAAAAGCTAGATGCTTGTATTCTTGCTAAACTGATATCAGTAATGGAGGAGAAGATAGAAGACCCTAGCCTCTATGGTATGATCCAAAGCATGTTTCACGCTAATGTACTCAATTTCGAGTTTGGTGGTTTCCCAAAATGTCATGGTCTTCCACAGGAGGGAGTATTGTCCCCTATATTAATGAATATTTATCTTGACCTATTTGACCGCGAGTTTTACAGATTATCAATGAAGTATGAAGCTCTCATTCCAGGTTTACATACTGATCAAAAGTCCCAGTCTAGGTTGCGCAGCTGGTTTAGGAGGAACTTGAAAGGTAATGATCTTGGCTGTGTAGGTGAAGAGAGTTTTAGAGTCCATTCTTGTCGCTTCATGGATGAGATATTCTTTTCAGTTGCTGGTTCTAAGGATGCAGCTCTTGATTTCAAATCTGAGGTTCAAAAGTACTTGCAGAAGTCTTTGCACTTGGAAGTTGTTGATCAAACAGAATTATTGCCATGTCAAATGTCGCAGGGGATCCGCTTTTTAGGCACCTTGATTAGAAGAAATGTGAAAGAAAGTCCTGCGACAAAAGCAGTCCACAAGTTAAAGGAAAAAGTTGCTTTATTTGGTCTACAAAAGCAAGAGGCATGGGATTCTGGAACAGTTAGCATAGGCAAGAAATGGTTGGGTCATGCTTTGAAGAAGGTCAAGGAATCAGAGATCAAGCATTTGGCTGACAGCAGGTCTGTTCTGAGTCAAATTTCCCATTGCCGTAAATCTGGTATGGAAACTGATCATTGGTACAAGTACATGCTGAAGATTTGGATGCAAGATGTCAAAGCCAAAGCAGAAGAGAGCGAGGAAGCTATCCTGTCTAAGTATGTCGCAGAACCAGCTTTACCTGAAGAACTAAGAAACTCCTTTTATGAATTTCAGAGGCATGTGGAAAAATATGTTTCTTCTGAGACCACTTCTACTCTTGCCCTTTTACCAAATGCTGGTTCTTCTACTGACTCTGTCATTGTCACTGAGATAATTGCTCCCGTTATTGCAATAAAAAAGCGTCTCCTACGATATGGATTGCTCACACGTGATGGTTACCCCCGTACATGCTCCTTGCTTGTTCTACAAGATAATGTTCAAATTATCAACTGGTTTTCAGGTATTGTTCGCCGTTGGCTTAGATGGTATGCCAAGTGTGATAACTTCAATGAGGTAAAACTCTTGATCTCTGATCTAGTAAGAAAATCGTGCATCCGAACTCTAGCAGCAAAGTATCGTGTGCACGAAGCTGAGATAGAAAAACGTTTTGACACTGAACTAAGCAGTATTCCCTCTACCCTAGAAGTTGAGCAAGAGATGGTAAGTGAAACATCAGACCCTCAGGCTTTAGAGAACGATGAGGCTTTAATGTATGGAATTTCTTACAGTGGCTTATGTTTGCTCTCTCTAGCAAGAATGGTGAGCCAGTCACGACCTTGCAATTGTTTTGTCATTGGGTGTACAGCTCCAGCACCGAGTGTCTATACTATTCATGTAATGGAAAGGCAGAAATTTCCTGGCTGGAAGACTGGGTTCTCAAGTTGTATTCATCCCAGCTTGAATAGACGGAGAATAGGGTTGTGCAAGCAACACTTAAAGAATTTGTATCTTGGTCATATATCACTTCAATCCATTGATTTTGGGGCATGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0000959 GO:0000963 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006109 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009507 GO:0009536 GO:0009791 GO:0009845 GO:0009889 GO:0009987 GO:0010467 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0019222 GO:0032501 GO:0032502 GO:0032881 GO:0032885 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048856 GO:0050789 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090351 GO:0090615 GO:0140053 GO:1900864 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Intron_maturas2 RVT_1

Protein Analysis

832

Amino Acids

94.65

Weight (kDa)

9.04

Isoelectric Point (pI)

49.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_1	PF00078	211 - 425	1.3e-08	Reverse transcriptase (RNA-dependent DNA polymerase)
Intron_maturas2	PF01348	612 - 720	4.6e-10	Type II intron maturase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008364)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74350
fragaria_vesca	FvH4_7g02870
malus_domestica	MD02G1287300.v1.1
prunus_persica	Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1
pyrus_communis	pycom02g24350
rosa_chinensis	RchiOBHm_Chr1g0323821
rosa_laevigata	RLG00000030266
rosa_roxburghii	Rroxscaffold_4G00326400
rosa_rugosa	Rorug01G0039700
rosa_samantha	Rh1AG057100 Rh1BG048100 Rh1DG062200
rosa_wichuraiana	Rw1G004880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	383, 1109
Acc36I	ACCTGC	1 cut(s)	1533
AccB1I	GGYRCC	1 cut(s)	1349
AccB7I	CCANNNNNTGG	1 cut(s)	1799
AccI	GTMKAC	1 cut(s)	1432
AccII	CGCG	1 cut(s)	1029
AciI	CCGC	2 cut(s)	1027, 1339
AclI	AACGTT	1 cut(s)	2107
AclWI	GGATC	5 cut(s)	10, 23, 895, 1330, 1343
AcsI	RAATTY	8 cut(s)	215, 571, 717, 1560, 1730, 2220, 2354, 2443
AcuI	CTGAAG	4 cut(s)	573, 674, 1637, 1725
AcvI	CACGTG	1 cut(s)	1892
AdeI	CACNNNGTG	1 cut(s)	2321
AfaI	GTAC	7 cut(s)	767, 927, 1265, 1604, 1610, 1909, 2305
AfiI	CCNNNNNNNGG	3 cut(s)	977, 1101, 1799
AflIII	ACRYGT	1 cut(s)	1889
AhdI	GACNNNNNGTC	1 cut(s)	1543
AjnI	CCWGG	4 cut(s)	299, 344, 1069, 2359
AjuI	GAANNNNNNNTTGG	4 cut(s)	897, 929, 1786, 1818
Alw21I	GWGCWC	1 cut(s)	2088
Alw26I	GTCTC	4 cut(s)	423, 773, 1760, 1871
Alw44I	GTGCAC	1 cut(s)	2084
AlwI	GGATC	5 cut(s)	10, 23, 895, 1330, 1343
AlwNI	CAGNNNCTG	1 cut(s)	1217
AoxI	GGCC	1 cut(s)	180
ApaLI	GTGCAC	1 cut(s)	2084
ApeKI	GCWGC	5 cut(s)	33, 86, 1110, 1232, 2069
ApoI	RAATTY	8 cut(s)	215, 571, 717, 1560, 1730, 2220, 2354, 2443
AseI	ATTAAT	2 cut(s)	258, 998
Asp700I	GAANNNNTTC	2 cut(s)	196, 465
AspLEI	GCGC	2 cut(s)	384, 1110
AspS9I	GGNCC	1 cut(s)	181
AsuHPI	GGTGA	4 cut(s)	145, 409, 1169, 2275
AxyI	CCTNAGG	1 cut(s)	2184
BaeGI	GKGCMC	1 cut(s)	2088
BamHI	GGATCC	2 cut(s)	15, 1335
BanI	GGYRCC	1 cut(s)	1349
BarI	GAAGNNNNNNTAC	2 cut(s)	392, 424
BbrPI	CACGTG	1 cut(s)	1892
BbsI	GAAGAC	4 cut(s)	346, 885, 959, 2375
Bbv12I	GWGCWC	1 cut(s)	2088
BbvI	GCAGC	5 cut(s)	45, 73, 1122, 1244, 2081
BccI	CCATC	6 cut(s)	179, 192, 680, 1889, 1980, 2155
BceAI	ACGGC	2 cut(s)	1557, 1959
BciT130I	CCWGG	4 cut(s)	301, 346, 1071, 2361
BclI	TGATCA	3 cut(s)	1084, 1297, 1594
BcoDI	GTCTC	4 cut(s)	423, 773, 1760, 1871
BfaI	CTAG	8 cut(s)	786, 827, 885, 1101, 2039, 2066, 2144, 2252
BfmI	CTRYAG	1 cut(s)	753
BfuAI	ACCTGC	1 cut(s)	1533
BisI	GCNGC	5 cut(s)	34, 87, 1111, 1233, 2070
BlsI	GCNGC	5 cut(s)	35, 88, 1112, 1234, 2071
BmcAI	AGTACT	1 cut(s)	1265
Bme1390I	CCNGG	4 cut(s)	301, 346, 1071, 2361
BmeRI	GACNNNNNGTC	1 cut(s)	1543
BmgT120I	GGNCC	1 cut(s)	181
BmiI	GGNNCC	3 cut(s)	17, 1337, 1351
BmrFI	CCNGG	4 cut(s)	301, 346, 1071, 2361
BmrI	ACTGGG	2 cut(s)	1090, 2382
BmsI	GCATC	5 cut(s)	463, 820, 1219, 1617, 2064
BmuI	ACTGGG	2 cut(s)	1090, 2382
BpiI	GAAGAC	4 cut(s)	346, 885, 959, 2375
BpmI	CTGGAG	2 cut(s)	267, 2295
BpuEI	CTTGAG	2 cut(s)	347, 2365
BsaAI	YACGTR	1 cut(s)	1892
BsaI	GGTCTC	2 cut(s)	423, 1760
BsaJI	CCNNGG	1 cut(s)	344
Bsc4I	CCNNNNNNNGG	3 cut(s)	977, 1101, 1799
Bse1I	ACTGG	6 cut(s)	10, 135, 1096, 1958, 2269, 2377
Bse21I	CCTNAGG	1 cut(s)	2184
Bse3DI	GCAATG	2 cut(s)	447, 1567
BseBI	CCWGG	4 cut(s)	301, 346, 1071, 2361
BseDI	CCNNGG	1 cut(s)	344
BseGI	GGATG	6 cut(s)	334, 1201, 1234, 1632, 2055, 2392
BseLI	CCNNNNNNNGG	3 cut(s)	977, 1101, 1799
BseMI	GCAATG	2 cut(s)	447, 1567
BseMII	CTCAG	6 cut(s)	1242, 1544, 1755, 1821, 2085, 2198
BseNI	ACTGG	6 cut(s)	10, 135, 1096, 1958, 2269, 2377
BseRI	GAGGAG	1 cut(s)	881
BseSI	GKGCMC	1 cut(s)	2088
BseXI	GCAGC	5 cut(s)	45, 73, 1122, 1244, 2081
BseYI	CCCAGC	1 cut(s)	2396
Bsh1236I	CGCG	1 cut(s)	1029
BshFI	GGCC	1 cut(s)	182
BshNI	GGYRCC	1 cut(s)	1349
BsiHKAI	GWGCWC	1 cut(s)	2088
BslFI	GGGAC	3 cut(s)	153, 973, 1078
BslI	CCNNNNNNNGG	3 cut(s)	977, 1101, 1799
BsmAI	GTCTC	4 cut(s)	423, 773, 1760, 1871
BsmBI	CGTCTC	1 cut(s)	1871
BsmFI	GGGAC	3 cut(s)	153, 973, 1078
BsmI	GAATGC	2 cut(s)	619, 748
BsnI	GGCC	1 cut(s)	182
Bso31I	GGTCTC	2 cut(s)	423, 1760
Bsp1286I	GDGCHC	1 cut(s)	2088
Bsp1407I	TGTACA	1 cut(s)	2303
BspACI	CCGC	2 cut(s)	1027, 1339
BspANI	GGCC	1 cut(s)	182
BspCNI	CTCAG	6 cut(s)	1243, 1545, 1756, 1822, 2086, 2197
BspFNI	CGCG	1 cut(s)	1029
BspLI	GGNNCC	3 cut(s)	17, 1337, 1351
BspMI	ACCTGC	1 cut(s)	1533
BspPI	GGATC	5 cut(s)	10, 23, 895, 1330, 1343
BspQI	GCTCTTC	2 cut(s)	187, 549
BspT107I	GGYRCC	1 cut(s)	1349
BspTNI	GGTCTC	2 cut(s)	423, 1760
BsrDI	GCAATG	2 cut(s)	447, 1567
BsrGI	TGTACA	1 cut(s)	2303
BsrI	ACTGG	6 cut(s)	10, 135, 1096, 1958, 2269, 2377
BssECI	CCNNGG	1 cut(s)	344
Bst2UI	CCWGG	4 cut(s)	301, 346, 1071, 2361
Bst4CI	ACNGT	4 cut(s)	178, 235, 1465, 2231
Bst6I	CTCTTC	6 cut(s)	187, 386, 471, 549, 1155, 1647
BstAUI	TGTACA	1 cut(s)	2303
BstBAI	YACGTR	1 cut(s)	1892
BstC8I	GCNNGC	2 cut(s)	103, 2429
BstEII	GGTNACC	2 cut(s)	728, 1898
BstF5I	GGATG	6 cut(s)	334, 1201, 1234, 1632, 2055, 2392
BstFNI	CGCG	1 cut(s)	1029
BstHHI	GCGC	2 cut(s)	384, 1110
BstMAI	GTCTC	4 cut(s)	423, 773, 1760, 1871
BstMWI	GCNNNNNNNGC	3 cut(s)	1347, 1391, 1694
BstNI	CCWGG	4 cut(s)	301, 346, 1071, 2361
BstNSI	RCATGY	4 cut(s)	913, 1615, 1745, 1914
BstPI	GGTNACC	2 cut(s)	728, 1898
BstSCI	CCNGG	4 cut(s)	299, 344, 1069, 2359
BstSFI	CTRYAG	1 cut(s)	753
BstSLI	GKGCMC	1 cut(s)	2088
BstUI	CGCG	1 cut(s)	1029
BstV1I	GCAGC	5 cut(s)	45, 73, 1122, 1244, 2081
BstV2I	GAAGAC	4 cut(s)	346, 885, 959, 2375
BstX2I	RGATCY	2 cut(s)	15, 1335
BstXI	CCANNNNNNTGG	1 cut(s)	178
BstYI	RGATCY	2 cut(s)	15, 1335
Bsu36I	CCTNAGG	1 cut(s)	2184
BsuRI	GGCC	1 cut(s)	182
BtsCI	GGATG	6 cut(s)	334, 1201, 1234, 1632, 2055, 2392
BtsI	GCAGTG	2 cut(s)	69, 96
BtsIMutI	CAGTG	7 cut(s)	69, 96, 128, 183, 1827, 2115, 2236
BveI	ACCTGC	1 cut(s)	1533
Cac8I	GCNNGC	2 cut(s)	103, 2429
CaiI	CAGNNNCTG	1 cut(s)	1217
CfoI	GCGC	2 cut(s)	384, 1110
Cfr13I	GGNCC	1 cut(s)	181
CseI	GACGC	1 cut(s)	1853
Csp6I	GTAC	7 cut(s)	766, 926, 1264, 1603, 1609, 1908, 2304
CviQI	GTAC	7 cut(s)	766, 926, 1264, 1603, 1609, 1908, 2304
DraIII	CACNNNGTG	1 cut(s)	2321
DriI	GACNNNNNGTC	1 cut(s)	1543
Eam1104I	CTCTTC	6 cut(s)	187, 386, 471, 549, 1155, 1647
Eam1105I	GACNNNNNGTC	1 cut(s)	1543
EarI	CTCTTC	6 cut(s)	187, 386, 471, 549, 1155, 1647
Eco31I	GGTCTC	2 cut(s)	423, 1760
Eco32I	GATATC	1 cut(s)	855
Eco57I	CTGAAG	4 cut(s)	573, 674, 1637, 1725
Eco72I	CACGTG	1 cut(s)	1892
Eco81I	CCTNAGG	1 cut(s)	2184
Eco91I	GGTNACC	2 cut(s)	728, 1898
EcoO65I	GGTNACC	2 cut(s)	728, 1898
EcoRII	CCWGG	4 cut(s)	299, 344, 1069, 2359
EcoRV	GATATC	1 cut(s)	855
Esp3I	CGTCTC	1 cut(s)	1871
FalI	AAGNNNNNCTT	4 cut(s)	692, 724, 2420, 2452
FaqI	GGGAC	3 cut(s)	153, 973, 1078
FauNDI	CATATG	1 cut(s)	324
FbaI	TGATCA	3 cut(s)	1084, 1297, 1594
FblI	GTMKAC	1 cut(s)	1432
Fnu4HI	GCNGC	5 cut(s)	34, 87, 1111, 1233, 2070
FokI	GGATG	6 cut(s)	341, 1208, 1241, 1639, 2042, 2379
Fsp4HI	GCNGC	5 cut(s)	34, 87, 1111, 1233, 2070
FspBI	CTAG	8 cut(s)	786, 827, 885, 1101, 2039, 2066, 2144, 2252
FspI	TGCGCA	2 cut(s)	383, 1109
GlaI	GCGC	2 cut(s)	383, 1109
GluI	GCNGC	5 cut(s)	34, 87, 1111, 1233, 2070
GsaI	CCCAGC	1 cut(s)	2400
GsuI	CTGGAG	2 cut(s)	267, 2295
HaeIII	GGCC	1 cut(s)	182
HgaI	GACGC	1 cut(s)	1853
HhaI	GCGC	2 cut(s)	384, 1110
Hin6I	GCGC	2 cut(s)	382, 1108
HinP1I	GCGC	2 cut(s)	382, 1108
HinfI	GANTC	8 cut(s)	314, 492, 649, 1173, 1454, 1514, 1555, 1814
HphI	GGTGA	4 cut(s)	145, 409, 1169, 2275
Hpy166II	GTNNAC	6 cut(s)	697, 1076, 1399, 1433, 2086, 2304
Hpy8I	GTNNAC	6 cut(s)	697, 1076, 1399, 1433, 2086, 2304
HpyAV	CCTTC	4 cut(s)	394, 604, 649, 1498
HpyCH4III	ACNGT	4 cut(s)	178, 235, 1465, 2231
HpyCH4IV	ACGT	2 cut(s)	1891, 2107
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1347, 1391, 1694
HpySE526I	ACGT	2 cut(s)	1891, 2107
HspAI	GCGC	2 cut(s)	382, 1108
Ksp22I	TGATCA	3 cut(s)	1084, 1297, 1594
LguI	GCTCTTC	2 cut(s)	187, 549
LmnI	GCTCC	4 cut(s)	348, 1846, 1919, 2314
Lsp1109I	GCAGC	5 cut(s)	45, 73, 1122, 1244, 2081
LweI	GCATC	5 cut(s)	463, 820, 1219, 1617, 2064
MaeI	CTAG	8 cut(s)	786, 827, 885, 1101, 2039, 2066, 2144, 2252
MaeII	ACGT	2 cut(s)	1891, 2107
MaeIII	GTNAC	4 cut(s)	728, 1825, 1898, 2271
MfeI	CAATTG	1 cut(s)	2284
MflI	RGATCY	2 cut(s)	15, 1335
MhlI	GDGCHC	1 cut(s)	2088
MlyI	GAGTC	4 cut(s)	486, 1182, 1564, 1808
MroXI	GAANNNNTTC	2 cut(s)	196, 465
MseI	TTAA	9 cut(s)	258, 387, 518, 582, 816, 998, 1406, 2210, 2438
MslI	CAYNNNNRTG	4 cut(s)	176, 327, 921, 2494
MspA1I	CMGCKG	1 cut(s)	1113
MspR9I	CCNGG	4 cut(s)	301, 346, 1071, 2361
MunI	CAATTG	1 cut(s)	2284
Mva1269I	GAATGC	2 cut(s)	619, 748
MvaI	CCWGG	4 cut(s)	301, 346, 1071, 2361
MvnI	CGCG	1 cut(s)	1029
MwoI	GCNNNNNNNGC	3 cut(s)	1347, 1391, 1694
NdeI	CATATG	1 cut(s)	324
NlaIV	GGNNCC	3 cut(s)	17, 1337, 1351
NmuCI	GTSAC	2 cut(s)	1825, 2271
NsbI	TGCGCA	2 cut(s)	383, 1109
NspI	RCATGY	4 cut(s)	913, 1615, 1745, 1914
PciSI	GCTCTTC	2 cut(s)	187, 549
PctI	GAATGC	2 cut(s)	619, 748
PdmI	GAANNNNTTC	2 cut(s)	196, 465
PfeI	GAWTC	4 cut(s)	314, 649, 1454, 1514
PflFI	GACNNNGTC	1 cut(s)	1817
PflMI	CCANNNNNTGG	1 cut(s)	1799
PkrI	GCNGC	5 cut(s)	35, 88, 1112, 1234, 2071
PleI	GAGTC	4 cut(s)	486, 1181, 1563, 1808
PmaCI	CACGTG	1 cut(s)	1892
PmlI	CACGTG	1 cut(s)	1892
PpsI	GAGTC	4 cut(s)	486, 1181, 1563, 1808
Ppu21I	YACGTR	1 cut(s)	1892
PshBI	ATTAAT	2 cut(s)	258, 998
Psp1406I	AACGTT	1 cut(s)	2107
Psp6I	CCWGG	4 cut(s)	299, 344, 1069, 2359
PspCI	CACGTG	1 cut(s)	1892
PspEI	GGTNACC	2 cut(s)	728, 1898
PspFI	CCCAGC	1 cut(s)	2396
PspGI	CCWGG	4 cut(s)	299, 344, 1069, 2359
PspN4I	GGNNCC	3 cut(s)	17, 1337, 1351
PspPI	GGNCC	1 cut(s)	181
PsrI	GAACNNNNNNTAC	2 cut(s)	1683, 1715
PstNI	CAGNNNCTG	1 cut(s)	1217
PsuI	RGATCY	2 cut(s)	15, 1335
PsyI	GACNNNGTC	1 cut(s)	1817
PvuII	CAGCTG	1 cut(s)	1113
RsaI	GTAC	7 cut(s)	767, 927, 1265, 1604, 1610, 1909, 2305
RsaNI	GTAC	7 cut(s)	766, 926, 1264, 1603, 1609, 1908, 2304
RseI	CAYNNNNRTG	4 cut(s)	176, 327, 921, 2494
SapI	GCTCTTC	2 cut(s)	187, 549
SaqAI	TTAA	9 cut(s)	258, 387, 518, 582, 816, 998, 1406, 2210, 2438
SatI	GCNGC	5 cut(s)	34, 87, 1111, 1233, 2070
Sau96I	GGNCC	1 cut(s)	181
ScaI	AGTACT	1 cut(s)	1265
SchI	GAGTC	4 cut(s)	486, 1182, 1564, 1808
ScrFI	CCNGG	4 cut(s)	301, 346, 1071, 2361
SduI	GDGCHC	1 cut(s)	2088
SfaNI	GCATC	5 cut(s)	463, 820, 1219, 1617, 2064
SfcI	CTRYAG	1 cut(s)	753
SmiMI	CAYNNNNRTG	4 cut(s)	176, 327, 921, 2494
SmlI	CTYRAG	2 cut(s)	362, 2380
SmoI	CTYRAG	2 cut(s)	362, 2380
SsiI	CCGC	2 cut(s)	1027, 1339
SspI	AATATT	2 cut(s)	505, 1006
SspMI	CTAG	8 cut(s)	786, 827, 885, 1101, 2039, 2066, 2144, 2252
StyD4I	CCNGG	4 cut(s)	299, 344, 1069, 2359
TaaI	ACNGT	4 cut(s)	178, 235, 1465, 2231
TaiI	ACGT	2 cut(s)	1894, 2110
TaqI	TCGA	2 cut(s)	140, 936
TatI	WGTACW	5 cut(s)	765, 925, 1263, 1608, 2303
TfiI	GAWTC	4 cut(s)	314, 649, 1454, 1514
Tru1I	TTAA	9 cut(s)	258, 387, 518, 582, 816, 998, 1406, 2210, 2438
Tru9I	TTAA	9 cut(s)	258, 387, 518, 582, 816, 998, 1406, 2210, 2438
TscAI	CASTG	7 cut(s)	76, 103, 135, 183, 1834, 2122, 2236
TseFI	GTSAC	2 cut(s)	1825, 2271
TseI	GCWGC	5 cut(s)	33, 86, 1110, 1232, 2069
Tsp45I	GTSAC	2 cut(s)	1825, 2271
TspDTI	ATGAA	9 cut(s)	293, 327, 1016, 1064, 1071, 1180, 1743, 2324, 2381
TspGWI	ACGGA	1 cut(s)	2425
TspRI	CASTG	7 cut(s)	76, 103, 135, 183, 1834, 2122, 2236
Tth111I	GACNNNGTC	1 cut(s)	1817
Van91I	CCANNNNNTGG	1 cut(s)	1799
VneI	GTGCAC	1 cut(s)	2084
VspI	ATTAAT	2 cut(s)	258, 998
XapI	RAATTY	8 cut(s)	215, 571, 717, 1560, 1730, 2220, 2354, 2443
XceI	RCATGY	4 cut(s)	913, 1615, 1745, 1914
XcmI	CCANNNNNNNNNTGG	1 cut(s)	352
XmiI	GTMKAC	1 cut(s)	1432
XmnI	GAANNNNTTC	2 cut(s)	196, 465
XspI	CTAG	8 cut(s)	786, 827, 885, 1101, 2039, 2066, 2144, 2252
ZrmI	AGTACT	1 cut(s)	1265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.