Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0008364

Physical Location & Seq

Genomic Coordinates Reverse (-)

10978630 .. 10981080

Gene Structure 2451 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG062200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2451 bp

ATGTCTTATGAAAAAAGGCTCACTGCTGTCAGAAAAGCTGCCTCTCTCACTGCTCGCCTTTGTGAGACGGTGCAAAAGACGCTTGTGAAGTCGAACACTTCTTCAAAATCAGATAAAAGTCCAATCACAGTGGCCCATCATGGTACAGCTTCCGAAAGATTACAAGCATTTGCAGATCATTCTACTGTCGCTACTGCTGGAGATGATATTAATAACGGCGTTTGTAAAATGAAATTGGCAAAGAACTTAGCCTGTCTTGTAGATGAATCTTCTCATGTAGATGAGAGAAGAAGACCCAGAAGCAGAATGGAACTCAAGAGGTCTCTTGAACTGTGCATTAAGAAGAGGGTGAAGGAACAATACCTCAATGGGAAGTTTCGAGACCTAATGGCAAAAGTCATTGCCAATCCAGAAACTCTTCAAGATGCTTACGATTGTATCAGACTCAACTCCAATATTGATATAGTGTTAAATGATGAGAAAACTTCTTTTGGTTCTATGGCTGAAGAGCTGTATCTTGGGAATTTTGATGTTAATGCTAATACCTTCTCTATCTCAACAAAGAGTGCAAGGAAAGATGTTTTAGTGCTTCCCAATGTGAATCTGAAGGTCATTCAGGAAGCCGTCAGAATTGTTTTAGAAGTTGTTTACAAGCCCCACTTCTCTAGGATTTCACATGGTTACCGAAGTGGGAGGGGGCATTCTACAGCTTTGAAGTACATAAGCAAGGAGACTGCTAGTTCTGATTGGTGGTTTATATTGCTCATTAACAAAAAGCTAGATGCTTGTATTCTTGCTAAACTGATATCAGTAATGGAGGAGAAGATAGAAGACCCTAGCCTCTACGTTATGATCCAAAGCATGTTTCACGCTAATGTACTCAATTTCGAGTTTGGTGGTTTCCCAAAAGGTCATGGTCTTCCACAGGAGGGAGTATTGTCCCCTATATTAATGAATATTTATCTTGACCTATTTGACCGCGAATTTTACAGATTATCAATGAAGTATGAAGCTCTCATTCCAGGTTTTCATACTGATCAAAAGTCCCAGTCTAGGTTGCGCAGCTGGTTTAGGAGGAACCTGAAAGGTAATGATCTTGGCTGTGCAGGTGAAGAGAGTTTTAGGGTCCATTCTTGTCGCTTCATGGATGAGATATTCTTTTCAGTTGCTGGTTCTGAGGATGCAGCTCTTGATTTCAAATCTGAGGTTCTAAATTTCTTGCAGAAGTCTTTGCACTTGGAAGTTGATGATCAAACAGAATTATTGCCATGTCAAATGTCGCAGGGGATCTGCTTTTTAGGCACCTTGATTAGAAGAAATGTGAAAGAAAGTCCTGCGACAAAAGCAGTCCACAAGTTAAAGGAAAAAGTTGCTTTATTTGGTCTACAAAAGCAAGAGGCATGGGATTCTGGAACAGTTAGTGTAGGCAAGAAATGGTTGGGTCATGGTTTGAAGAAGGTCAAGGAATCAGAGATTAAGCATTTAGCTGACAGCAGATCTGTTCTGAGTCAAATTTCCCATTTCCGTAAATCTGGTATGGAAACTGATCATTGGTACAAGTACATACTGAAGATTTGGATGCAAGATGTCAAAGCCAAAGCAGCAGAGAGCGAGGAAGCTATCCTGTCTAAGTATGTCGCAGAACCAGCTTTACCTGAAGAACTAAGAAACTCCTTTTATGAATTTCAGAGGCATGTGGAAAAATATGTTTCTTCTGAGACTGCCTCTACTCTTGCGCTTTTGCCAAATGCTGGTTCTTCTACTGACTCTGTCATTGTCACTGAGATAATTGCTCCCGTTATTGCAATAAAAAAGCGCCTCCTACGATATGGATTGCTCACGCGTGATGGTTACCCCCGTACATGCTCCTTGCTTGTTTTACAAGATAATGTTCAAATTATCGACTGGTTTTCAGGTATTGTTCGCCGTTGGCTTAGATGGTATGCCAAGTGTGATAACTTCAATGAGGTAAAACTCTTGATCTCTGATCTAGTAAGAAAATCATGCATCCGAACTCTAGCAGCAAAGTATCGTGTGCACGAAGCTGAGATAGAAAAACGTTTTGACATTGAACTAAGCAGTATTCCCTCTACCCTAGAAGTTGAGCAAGAGATCGTAAGTGAAACATCAGACCCTCAGGCTTTAGAGAACGATGAGGCTTTAATGTATGGAATTTCTTACAGTGGCTTATGTTTGCTCTCTCTAGCAAGAATGGTGAGCCAGTCACGACCTTGCACTTGTTTTGTCATTGGGTGTACAGCTCCAGCACCGAGTGTCTATACTATTCATGTAATGGAAAGGCAAAAATTTCCTGGCTGGAAGACTGGGTTCTCAAGTTGTATTCATCCCAGCTTGAATAGACGGAGAATAGGGTTGTGCAAGCAACACTTGAAGAATTTGTATCTTGGTCATATATCACTTCAATCCATTGATTTTGGGGCATGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0000959 GO:0000963 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006109 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009507 GO:0009536 GO:0009791 GO:0009845 GO:0009889 GO:0009987 GO:0010467 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0019222 GO:0032501 GO:0032502 GO:0032881 GO:0032885 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048856 GO:0050789 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090351 GO:0090615 GO:0140053 GO:1900864 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Intron_maturas2 RVT_1

Protein Analysis

816

Amino Acids

92.56

Weight (kDa)

8.91

Isoelectric Point (pI)

52.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_1	PF00078	195 - 409	4.7e-08	Reverse transcriptase (RNA-dependent DNA polymerase)
Intron_maturas2	PF01348	596 - 696	1.3e-09	Type II intron maturase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008364)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74350
fragaria_vesca	FvH4_7g02870
malus_domestica	MD02G1287300.v1.1
prunus_persica	Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1 Prupe.2G034000_v2.0.a1
pyrus_communis	pycom02g24350
rosa_chinensis	RchiOBHm_Chr1g0323821
rosa_laevigata	RLG00000030266
rosa_roxburghii	Rroxscaffold_4G00326400
rosa_rugosa	Rorug01G0039700
rosa_samantha	Rh1AG057100 Rh1BG048100 Rh1DG062200
rosa_wichuraiana	Rw1G004880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1097
Acc16I	TGCGCA	1 cut(s)	1061
Acc36I	ACCTGC	1 cut(s)	1097
AccB1I	GGYRCC	1 cut(s)	1301
AccB7I	CCANNNNNTGG	1 cut(s)	1751
AccI	GTMKAC	1 cut(s)	1384
AccII	CGCG	2 cut(s)	981, 1843
AciI	CCGC	1 cut(s)	979
AclI	AACGTT	1 cut(s)	2059
AclWI	GGATC	2 cut(s)	847, 1295
AcsI	RAATTY	8 cut(s)	523, 983, 1213, 1512, 1682, 2172, 2306, 2395
AcuI	CTGAAG	4 cut(s)	525, 626, 1589, 1677
AdeI	CACNNNGTG	1 cut(s)	2273
AfaI	GTAC	7 cut(s)	145, 719, 879, 1556, 1562, 1861, 2257
AfiI	CCNNNNNNNGG	3 cut(s)	929, 1053, 1751
AflIII	ACRYGT	1 cut(s)	1841
AjnI	CCWGG	2 cut(s)	1021, 2311
AjuI	GAANNNNNNNTTGG	4 cut(s)	849, 881, 1738, 1770
Alw21I	GWGCWC	1 cut(s)	2040
Alw26I	GTCTC	5 cut(s)	59, 327, 375, 725, 1712
Alw44I	GTGCAC	1 cut(s)	2036
AlwI	GGATC	2 cut(s)	847, 1295
AlwNI	CAGNNNCTG	1 cut(s)	1169
AoxI	GGCC	1 cut(s)	132
ApaLI	GTGCAC	1 cut(s)	2036
ApeKI	GCWGC	5 cut(s)	38, 1062, 1184, 1601, 2021
ApoI	RAATTY	8 cut(s)	523, 983, 1213, 1512, 1682, 2172, 2306, 2395
AseI	ATTAAT	2 cut(s)	210, 950
Asp700I	GAANNNNTTC	1 cut(s)	417
AspLEI	GCGC	3 cut(s)	1062, 1738, 1818
AspS9I	GGNCC	2 cut(s)	133, 1126
AsuHPI	GGTGA	3 cut(s)	361, 1121, 2227
AvaII	GGWCC	1 cut(s)	1126
AxyI	CCTNAGG	1 cut(s)	2136
BaeGI	GKGCMC	1 cut(s)	2040
BaeI	ACNNNNGTAYC	2 cut(s)	421, 454
BanI	GGYRCC	1 cut(s)	1301
BarI	GAAGNNNNNNTAC	2 cut(s)	344, 376
BbsI	GAAGAC	4 cut(s)	298, 837, 911, 2327
Bbv12I	GWGCWC	1 cut(s)	2040
BbvI	GCAGC	5 cut(s)	25, 1074, 1196, 1613, 2033
BccI	CCATC	3 cut(s)	144, 1841, 1932
BceAI	ACGGC	3 cut(s)	232, 608, 1911
BciT130I	CCWGG	2 cut(s)	1023, 2313
BclI	TGATCA	3 cut(s)	1036, 1249, 1546
BcoDI	GTCTC	5 cut(s)	59, 327, 375, 725, 1712
BfaI	CTAG	9 cut(s)	666, 738, 779, 837, 1053, 1991, 2018, 2096, 2204
BfmI	CTRYAG	1 cut(s)	705
BfoI	RGCGCY	1 cut(s)	1819
BfuAI	ACCTGC	1 cut(s)	1097
BglII	AGATCT	1 cut(s)	1496
BisI	GCNGC	5 cut(s)	39, 1063, 1185, 1602, 2022
BlsI	GCNGC	5 cut(s)	40, 1064, 1186, 1603, 2023
Bme1390I	CCNGG	2 cut(s)	1023, 2313
Bme18I	GGWCC	1 cut(s)	1126
BmgT120I	GGNCC	2 cut(s)	133, 1126
BmiI	GGNNCC	3 cut(s)	1079, 1127, 1303
BmrFI	CCNGG	2 cut(s)	1023, 2313
BmrI	ACTGGG	2 cut(s)	1042, 2334
BmsI	GCATC	5 cut(s)	415, 772, 1171, 1569, 2016
BmuI	ACTGGG	2 cut(s)	1042, 2334
BpiI	GAAGAC	4 cut(s)	298, 837, 911, 2327
BplI	GAGNNNNNCTC	2 cut(s)	1709, 1741
BpmI	CTGGAG	2 cut(s)	219, 2247
BpuEI	CTTGAG	2 cut(s)	299, 2317
BsaI	GGTCTC	2 cut(s)	327, 375
Bsc4I	CCNNNNNNNGG	3 cut(s)	929, 1053, 1751
Bse1I	ACTGG	4 cut(s)	1048, 1910, 2221, 2329
Bse21I	CCTNAGG	1 cut(s)	2136
Bse3DI	GCAATG	1 cut(s)	399
BseBI	CCWGG	2 cut(s)	1023, 2313
BseGI	GGATG	5 cut(s)	1153, 1186, 1584, 2007, 2344
BseLI	CCNNNNNNNGG	3 cut(s)	929, 1053, 1751
BseMI	GCAATG	1 cut(s)	399
BseMII	CTCAG	7 cut(s)	1167, 1194, 1496, 1707, 1773, 2037, 2150
BseNI	ACTGG	4 cut(s)	1048, 1910, 2221, 2329
BseRI	GAGGAG	1 cut(s)	833
BseSI	GKGCMC	1 cut(s)	2040
BseXI	GCAGC	5 cut(s)	25, 1074, 1196, 1613, 2033
BseYI	CCCAGC	1 cut(s)	2348
BsgI	GTGCAG	1 cut(s)	1125
Bsh1236I	CGCG	2 cut(s)	981, 1843
BshFI	GGCC	1 cut(s)	134
BshNI	GGYRCC	1 cut(s)	1301
BsiHKAI	GWGCWC	1 cut(s)	2040
BslFI	GGGAC	2 cut(s)	925, 1030
BslI	CCNNNNNNNGG	3 cut(s)	929, 1053, 1751
BsmAI	GTCTC	5 cut(s)	59, 327, 375, 725, 1712
BsmBI	CGTCTC	1 cut(s)	59
BsmFI	GGGAC	2 cut(s)	925, 1030
BsmI	GAATGC	1 cut(s)	700
BsnI	GGCC	1 cut(s)	134
Bso31I	GGTCTC	2 cut(s)	327, 375
Bsp1286I	GDGCHC	1 cut(s)	2040
Bsp1407I	TGTACA	1 cut(s)	2255
BspACI	CCGC	1 cut(s)	979
BspANI	GGCC	1 cut(s)	134
BspCNI	CTCAG	7 cut(s)	1168, 1195, 1497, 1708, 1774, 2038, 2149
BspFNI	CGCG	2 cut(s)	981, 1843
BspLI	GGNNCC	3 cut(s)	1079, 1127, 1303
BspMI	ACCTGC	1 cut(s)	1097
BspPI	GGATC	2 cut(s)	847, 1295
BspQI	GCTCTTC	1 cut(s)	501
BspT107I	GGYRCC	1 cut(s)	1301
BspTNI	GGTCTC	2 cut(s)	327, 375
BsrDI	GCAATG	1 cut(s)	399
BsrGI	TGTACA	1 cut(s)	2255
BsrI	ACTGG	4 cut(s)	1048, 1910, 2221, 2329
Bst2UI	CCWGG	2 cut(s)	1023, 2313
Bst4CI	ACNGT	6 cut(s)	70, 130, 187, 333, 1417, 2183
Bst6I	CTCTTC	4 cut(s)	338, 423, 501, 1107
BstAUI	TGTACA	1 cut(s)	2255
BstC8I	GCNNGC	2 cut(s)	55, 2381
BstEII	GGTNACC	2 cut(s)	680, 1850
BstF5I	GGATG	5 cut(s)	1153, 1186, 1584, 2007, 2344
BstFNI	CGCG	2 cut(s)	981, 1843
BstH2I	RGCGCY	1 cut(s)	1819
BstHHI	GCGC	3 cut(s)	1062, 1738, 1818
BstMAI	GTCTC	5 cut(s)	59, 327, 375, 725, 1712
BstMWI	GCNNNNNNNGC	5 cut(s)	79, 1299, 1343, 1601, 1646
BstNI	CCWGG	2 cut(s)	1023, 2313
BstNSI	RCATGY	3 cut(s)	865, 1697, 1866
BstPI	GGTNACC	2 cut(s)	680, 1850
BstSCI	CCNGG	2 cut(s)	1021, 2311
BstSFI	CTRYAG	1 cut(s)	705
BstSLI	GKGCMC	1 cut(s)	2040
BstUI	CGCG	2 cut(s)	981, 1843
BstV1I	GCAGC	5 cut(s)	25, 1074, 1196, 1613, 2033
BstV2I	GAAGAC	4 cut(s)	298, 837, 911, 2327
BstX2I	RGATCY	2 cut(s)	1287, 1496
BstYI	RGATCY	2 cut(s)	1287, 1496
Bsu36I	CCTNAGG	1 cut(s)	2136
BsuRI	GGCC	1 cut(s)	134
BtsCI	GGATG	5 cut(s)	1153, 1186, 1584, 2007, 2344
BtsI	GCAGTG	2 cut(s)	21, 48
BtsIMutI	CAGTG	5 cut(s)	21, 48, 135, 1779, 2188
BveI	ACCTGC	1 cut(s)	1097
Cac8I	GCNNGC	2 cut(s)	55, 2381
CaiI	CAGNNNCTG	1 cut(s)	1169
CfoI	GCGC	3 cut(s)	1062, 1738, 1818
Cfr13I	GGNCC	2 cut(s)	133, 1126
CseI	GACGC	1 cut(s)	88
Csp6I	GTAC	7 cut(s)	144, 718, 878, 1555, 1561, 1860, 2256
CspCI	CAANNNNNGTGG	2 cut(s)	111, 146
CviQI	GTAC	7 cut(s)	144, 718, 878, 1555, 1561, 1860, 2256
DraIII	CACNNNGTG	1 cut(s)	2273
Eam1104I	CTCTTC	4 cut(s)	338, 423, 501, 1107
EarI	CTCTTC	4 cut(s)	338, 423, 501, 1107
Eco31I	GGTCTC	2 cut(s)	327, 375
Eco32I	GATATC	1 cut(s)	807
Eco47I	GGWCC	1 cut(s)	1126
Eco57I	CTGAAG	4 cut(s)	525, 626, 1589, 1677
Eco81I	CCTNAGG	1 cut(s)	2136
Eco91I	GGTNACC	2 cut(s)	680, 1850
EcoO65I	GGTNACC	2 cut(s)	680, 1850
EcoRII	CCWGG	2 cut(s)	1021, 2311
EcoRV	GATATC	1 cut(s)	807
EcoT22I	ATGCAT	1 cut(s)	2009
Esp3I	CGTCTC	1 cut(s)	59
FalI	AAGNNNNNCTT	4 cut(s)	644, 676, 2372, 2404
FaqI	GGGAC	2 cut(s)	925, 1030
FbaI	TGATCA	3 cut(s)	1036, 1249, 1546
FblI	GTMKAC	1 cut(s)	1384
Fnu4HI	GCNGC	5 cut(s)	39, 1063, 1185, 1602, 2022
FokI	GGATG	5 cut(s)	1160, 1193, 1591, 1994, 2331
Fsp4HI	GCNGC	5 cut(s)	39, 1063, 1185, 1602, 2022
FspBI	CTAG	9 cut(s)	666, 738, 779, 837, 1053, 1991, 2018, 2096, 2204
FspI	TGCGCA	1 cut(s)	1061
GlaI	GCGC	3 cut(s)	1061, 1737, 1817
GluI	GCNGC	5 cut(s)	39, 1063, 1185, 1602, 2022
GsaI	CCCAGC	1 cut(s)	2352
GsuI	CTGGAG	2 cut(s)	219, 2247
HaeII	RGCGCY	1 cut(s)	1819
HaeIII	GGCC	1 cut(s)	134
HgaI	GACGC	1 cut(s)	88
HhaI	GCGC	3 cut(s)	1062, 1738, 1818
Hin6I	GCGC	3 cut(s)	1060, 1736, 1816
HinP1I	GCGC	3 cut(s)	1060, 1736, 1816
HinfI	GANTC	7 cut(s)	266, 444, 601, 1406, 1466, 1507, 1766
HphI	GGTGA	3 cut(s)	361, 1121, 2227
Hpy166II	GTNNAC	5 cut(s)	649, 1351, 1385, 2038, 2256
Hpy8I	GTNNAC	5 cut(s)	649, 1351, 1385, 2038, 2256
HpyAV	CCTTC	4 cut(s)	346, 556, 601, 1450
HpyCH4III	ACNGT	6 cut(s)	70, 130, 187, 333, 1417, 2183
HpyCH4IV	ACGT	2 cut(s)	846, 2059
HpyF10VI	GCNNNNNNNGC	5 cut(s)	79, 1299, 1343, 1601, 1646
HpySE526I	ACGT	2 cut(s)	846, 2059
HspAI	GCGC	3 cut(s)	1060, 1736, 1816
Ksp22I	TGATCA	3 cut(s)	1036, 1249, 1546
LguI	GCTCTTC	1 cut(s)	501
LmnI	GCTCC	3 cut(s)	1798, 1871, 2266
Lsp1109I	GCAGC	5 cut(s)	25, 1074, 1196, 1613, 2033
LweI	GCATC	5 cut(s)	415, 772, 1171, 1569, 2016
MaeI	CTAG	9 cut(s)	666, 738, 779, 837, 1053, 1991, 2018, 2096, 2204
MaeII	ACGT	2 cut(s)	846, 2059
MaeIII	GTNAC	4 cut(s)	680, 1777, 1850, 2223
MflI	RGATCY	2 cut(s)	1287, 1496
MhlI	GDGCHC	1 cut(s)	2040
MluI	ACGCGT	1 cut(s)	1841
MlyI	GAGTC	3 cut(s)	438, 1516, 1760
Mph1103I	ATGCAT	1 cut(s)	2009
MroXI	GAANNNNTTC	1 cut(s)	417
MseI	TTAA	9 cut(s)	210, 339, 470, 534, 768, 950, 1358, 1476, 2162
MslI	CAYNNNNRTG	3 cut(s)	279, 873, 2446
MspA1I	CMGCKG	1 cut(s)	1065
MspR9I	CCNGG	2 cut(s)	1023, 2313
Mva1269I	GAATGC	1 cut(s)	700
MvaI	CCWGG	2 cut(s)	1023, 2313
MvnI	CGCG	2 cut(s)	981, 1843
MwoI	GCNNNNNNNGC	5 cut(s)	79, 1299, 1343, 1601, 1646
NlaIV	GGNNCC	3 cut(s)	1079, 1127, 1303
NmuCI	GTSAC	2 cut(s)	1777, 2223
NsbI	TGCGCA	1 cut(s)	1061
NsiI	ATGCAT	1 cut(s)	2009
NspI	RCATGY	3 cut(s)	865, 1697, 1866
PaqCI	CACCTGC	1 cut(s)	1097
PciSI	GCTCTTC	1 cut(s)	501
PctI	GAATGC	1 cut(s)	700
PdmI	GAANNNNTTC	1 cut(s)	417
PfeI	GAWTC	4 cut(s)	266, 601, 1406, 1466
PflFI	GACNNNGTC	1 cut(s)	1769
PflMI	CCANNNNNTGG	1 cut(s)	1751
PkrI	GCNGC	5 cut(s)	40, 1064, 1186, 1603, 2023
PleI	GAGTC	3 cut(s)	438, 1515, 1760
PpsI	GAGTC	3 cut(s)	438, 1515, 1760
PshBI	ATTAAT	2 cut(s)	210, 950
Psp1406I	AACGTT	1 cut(s)	2059
Psp6I	CCWGG	2 cut(s)	1021, 2311
PspEI	GGTNACC	2 cut(s)	680, 1850
PspFI	CCCAGC	1 cut(s)	2348
PspGI	CCWGG	2 cut(s)	1021, 2311
PspN4I	GGNNCC	3 cut(s)	1079, 1127, 1303
PspPI	GGNCC	2 cut(s)	133, 1126
PsrI	GAACNNNNNNTAC	2 cut(s)	1635, 1667
PstNI	CAGNNNCTG	1 cut(s)	1169
PsuI	RGATCY	2 cut(s)	1287, 1496
PsyI	GACNNNGTC	1 cut(s)	1769
PvuII	CAGCTG	1 cut(s)	1065
RsaI	GTAC	7 cut(s)	145, 719, 879, 1556, 1562, 1861, 2257
RsaNI	GTAC	7 cut(s)	144, 718, 878, 1555, 1561, 1860, 2256
RseI	CAYNNNNRTG	3 cut(s)	279, 873, 2446
SapI	GCTCTTC	1 cut(s)	501
SaqAI	TTAA	9 cut(s)	210, 339, 470, 534, 768, 950, 1358, 1476, 2162
SatI	GCNGC	5 cut(s)	39, 1063, 1185, 1602, 2022
Sau96I	GGNCC	2 cut(s)	133, 1126
SchI	GAGTC	3 cut(s)	438, 1516, 1760
ScrFI	CCNGG	2 cut(s)	1023, 2313
SduI	GDGCHC	1 cut(s)	2040
SfaNI	GCATC	5 cut(s)	415, 772, 1171, 1569, 2016
SfcI	CTRYAG	1 cut(s)	705
SinI	GGWCC	1 cut(s)	1126
SmiMI	CAYNNNNRTG	3 cut(s)	279, 873, 2446
SmlI	CTYRAG	2 cut(s)	314, 2332
SmoI	CTYRAG	2 cut(s)	314, 2332
SsiI	CCGC	1 cut(s)	979
SspI	AATATT	2 cut(s)	457, 958
SspMI	CTAG	9 cut(s)	666, 738, 779, 837, 1053, 1991, 2018, 2096, 2204
StyD4I	CCNGG	2 cut(s)	1021, 2311
TaaI	ACNGT	6 cut(s)	70, 130, 187, 333, 1417, 2183
TaiI	ACGT	2 cut(s)	849, 2062
TaqI	TCGA	4 cut(s)	92, 379, 888, 1902
TatI	WGTACW	4 cut(s)	717, 877, 1560, 2255
TfiI	GAWTC	4 cut(s)	266, 601, 1406, 1466
Tru1I	TTAA	9 cut(s)	210, 339, 470, 534, 768, 950, 1358, 1476, 2162
Tru9I	TTAA	9 cut(s)	210, 339, 470, 534, 768, 950, 1358, 1476, 2162
TscAI	CASTG	5 cut(s)	28, 55, 135, 1786, 2188
TseFI	GTSAC	2 cut(s)	1777, 2223
TseI	GCWGC	5 cut(s)	38, 1062, 1184, 1601, 2021
Tsp45I	GTSAC	2 cut(s)	1777, 2223
TspGWI	ACGGA	2 cut(s)	1514, 2377
TspRI	CASTG	5 cut(s)	28, 55, 135, 1786, 2188
Tth111I	GACNNNGTC	1 cut(s)	1769
Van91I	CCANNNNNTGG	1 cut(s)	1751
VneI	GTGCAC	1 cut(s)	2036
VpaK11BI	GGWCC	1 cut(s)	1126
VspI	ATTAAT	2 cut(s)	210, 950
XapI	RAATTY	8 cut(s)	523, 983, 1213, 1512, 1682, 2172, 2306, 2395
XceI	RCATGY	3 cut(s)	865, 1697, 1866
XcmI	CCANNNNNNNNNTGG	1 cut(s)	304
XmiI	GTMKAC	1 cut(s)	1384
XmnI	GAANNNNTTC	1 cut(s)	417
XspI	CTAG	9 cut(s)	666, 738, 779, 837, 1053, 1991, 2018, 2096, 2204
Zsp2I	ATGCAT	1 cut(s)	2009

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.