FvH4_7g12090

Forkhead associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0005860
Physical Location & Seq
Reverse (-)
11007528 .. 11014145
6618 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g12090.t1

Sequence Viewer

Length: 2598 bp
ATGTCCGACGTCGGCGAAAGCGAGCCCGCTCCGGTAAAGCCCAACGCTCCTGTTCGCTCGGAGGAGTCCATGTCCCCCATGCAGTTCACCACCTCCGCCGCCGCCAAAATCGCCTCCCAGCCTCTCCCCTCCTACGACCCCTCCGTCTGGGGCGTCCTCACCGCCATCTCCTCCAAAGCCCGCAAACGCCCCCAGGGCATAAATATGCTACTGACTTCCAATGAGCATCAAATCGGACGTTGCGTGGACGATAAGCGGTTCCAGATTGAGTCGAATGCTATTAGCGCAAATCACTGCAGGATATATAAGAAGAAGGTCGATGAAGATGTGAAATGTGCATCAGTTTTCCTCAAGGACACGAGCACGAACGGGACGTATCTCAACTGGGAGAAGCTGACGAAAGTCGGCCCTGAAGTTGAAGTGCGACACGGCGACATTATATCGCTCTCTGCACCTCCTCAGCATGGTGCTGCGTTTGCATTTGTATTTAGAGAAGTTGTCTCCAATGCCACTACAGCTGGTGCTTTTGCAAAGAGAAAAGCAGATGAATTCGTTGGTGAGAACAAGAGACTGAAAGGTATTGGCATTGGGGCTCCTGAGGGTCCAATATCTCTTGATGATTTTCGAAGTCTTCAACGGTCAAACACGGAACTAAGGAAGCAATTAGAAAGTCAAGTCATTACAATTGATAGATTGCGCTGTGATAATCGTTTGGCTGTTGAGCGTCATGAAAATGAAAAAAAAGAACTGAAAGAATCAGTTGCAAAGCCTTACCTTGATCAACTGAAAGAGGTGCATCATAGTATGGAGGTTAAACAGAAGGAGGTGGTAGAGATCAGTAAGATATGTGCAGAACAAAAATATGCTCTTGAAGACCTTAATGAAAGGCTTACAGCATCTGTGCAGTCATGCACTGAAGCAAATGAAATAATGAATACTCAGAAAGCTTCTCTGGCTGAGCTCAAGGCACAGTTGGATGAAGAACGAGAGCAGAGAAGAGAAGAGCGAGAAAAGTCTGCAATAGATCTAAAAGCAGCAGTACATAAAGCTCAATCAGATGCTCAAGAGGAACTAAAACAATATTCTGATGCCGCCGCAAGACGAGAAAGAGAGCAACAAGAAGTAATTAACAAGCTTCAGGAATCAGAGAGAGAGACATGTTTACTGATAGAAAACTTGAGAACAAAATTGGAAGACACTAGGAAAAAGTTGGTAGTCTCTGAAAATAAAAACCGCCAGCTAGACACCCAAGTCGGTGAAGAGCAGTTAACCTCTGAAAGTCGAAAAAAGAGAGTGGAAGAACTTGAACATGACGTGAAAGGACTGAGGAAAGAGCTTGAGAGTGAAAAGCAGGCGGCTCGAGAAGAAGCATGGGCTAAAGTTTCTGCACTTGAACTAGAGATGAATTCTGCAATGCAAGATCTTGATTTTGAGAGAAGGAAATTGAAAGCTGCTAGGGAAAGAATAATGCTTCGGGAGACACAACTGAGGGCATTTTATTCCACAACAGAGGAGATCTCTGTGCTGTTTGCTAAACAACAGGAACAGTTGAAATCAATGCAGAGGACACTGGAAGATGAGGAAAATTATGATAACACATCAGTTGATTTTGACCTCAATGCTATTGTGGAAACAACTGGAACTGAAGGCAGAGATGATAAAGCAATCAGGTACCGTAGAAACAACACTGCTAGGGCAGGATCAGCAACAACACCGCAGAGGTCCAATGGAAATCAAATTGGAAGTTCTAGTGAAGAAGTCAGTGTTACTGAGAAGCATGACTGTGATATCAGGAGCCAAGAAGGTCAACATACCGAAGAGGCAGAATTCAGTAGTGCAAACCATGGTGTCAAGGGTGGCTTTGGTTCTGACATTGATGGTATTGGTACAGGACCTGTTGTGGAGGGAGATGGCATTGGCACTGAGCATGTCCCTGAAACTGAAGGCATGGACACTGAGCATGTTCCTGAAACTGAAAGCCCTGGAATGAATGAGAATATTGATTTGAACAGAGCTGCCGCTATTGAAGGGGATACTATGCAACTTGATGAGGAAGGCCATGTACAAGAAAATGACGAGCAAGGTCCAGTGATCTTTCATCAGCGTCACTCTCAATCAAACACAATCCGCACAGCAGACCTTATAGCTTCTGAAGTTATTGGTAGCTGGGCTTGTAGTACAGCCCCTTCTGTCCATGGAGAGAATGGATCTCCAAGCAGAGACAACAATGAGGAAGGTGCTGCTGCACCGCACGATCCGATTGACAGGGTGTCTGAGAGCCAAAGTACTCCATGTTCTGAGACTGCTGCCACAAGATGGAATCGTGAGCGTCAAGCACTGAGTGAAATGATTGGGATAGTTGCTCCCGACTTGAAAGAGCAGTTCAGGAATGTGGATGATAGCTATGATAGTGACAGAAGAAAACGAGCTTCTACATCTGACTCAGATACCGAGAGTTGTACGAACAGTGAAGATAACAACAAAGGTGATGTTGCCAAAGGTGGGTCAATTTCAGATTCAGAGACCGAGGGTAGTAATCGGGTTGATAACGCAATGGACGAAGATGATGTGGACACAGAAGAAGATTCTGTTGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FHA

Protein Analysis

866

Amino Acids

96.38

Weight (kDa)

4.89

Isoelectric Point (pI)

52.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FHA PF00498 78 - 149 2.7e-11 FHA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 143, 1250
AatII GACGTC 1 cut(s) 12
Acc65I GGTACC 1 cut(s) 1671
AccB1I GGYRCC 1 cut(s) 1671
AccB7I CCANNNNNTGG 1 cut(s) 2316
AccBSI CCGCTC 1 cut(s) 29
AclWI GGATC 3 cut(s) 1708, 2215, 2249
AcsI RAATTY 3 cut(s) 548, 1405, 1826
AcuI CTGAAG 6 cut(s) 432, 936, 1121, 1665, 1962, 2172
AcyI GRCGYC 2 cut(s) 9, 153
AdeI CACNNNGTG 1 cut(s) 2342
AfaI GTAC 7 cut(s) 1041, 1673, 1888, 2064, 2179, 2287, 2461
AfiI CCNNNNNNNGG 4 cut(s) 147, 464, 2316, 2502
AflIII ACRYGT 1 cut(s) 1157
AhdI GACNNNNNGTC 1 cut(s) 2269
AjiI CACGTC 1 cut(s) 1315
AjnI CCWGG 2 cut(s) 192, 1981
AjuI GAANNNNNNNTTGG 1 cut(s) 2574
Alw21I GWGCWC 2 cut(s) 365, 963
Alw26I GTCTC 8 cut(s) 505, 562, 1148, 1222, 1472, 2214, 2294, 2516
AlwI GGATC 3 cut(s) 1708, 2215, 2249
AlwNI CAGNNNCTG 2 cut(s) 899, 1895
Ama87I CYCGRG 1 cut(s) 1359
AoxI GGCC 2 cut(s) 406, 2056
ApeKI GCWGC 7 cut(s) 470, 1034, 1451, 2015, 2240, 2243, 2306
ApoI RAATTY 3 cut(s) 548, 1405, 1826
Asp718I GGTACC 1 cut(s) 1671
AspLEI GCGC 2 cut(s) 287, 699
AspS9I GGNCC 5 cut(s) 407, 602, 1722, 1892, 2084
AsuHPI GGTGA 5 cut(s) 79, 151, 569, 1268, 2498
AsuII TTCGAA 1 cut(s) 625
AvaI CYCGRG 1 cut(s) 1359
AvaII GGWCC 4 cut(s) 602, 1722, 1892, 2084
AxyI CCTNAGG 1 cut(s) 597
BanI GGYRCC 1 cut(s) 1671
BanII GRGCYC 3 cut(s) 27, 595, 963
BarI GAAGNNNNNNTAC 4 cut(s) 2046, 2078, 2170, 2202
BauI CACGAG 1 cut(s) 358
BbsI GAAGAC 3 cut(s) 623, 879, 1200
Bbv12I GWGCWC 2 cut(s) 365, 963
BbvCI CCTCAGC 1 cut(s) 459
BbvI GCAGC 7 cut(s) 457, 1046, 1438, 2002, 2227, 2230, 2293
BccI CCATC 4 cut(s) 173, 1871, 1904, 2310
BceAI ACGGC 1 cut(s) 445
BcgI CGANNNNNNTGC 2 cut(s) 1340, 1374
BciT130I CCWGG 2 cut(s) 194, 1983
BciVI GTATCC 1 cut(s) 2026
BclI TGATCA 1 cut(s) 778
BcoDI GTCTC 8 cut(s) 505, 562, 1148, 1222, 1472, 2214, 2294, 2516
BfaI CTAG 6 cut(s) 1200, 1241, 1397, 1455, 1692, 1749
BfmI CTRYAG 2 cut(s) 295, 513
BfuI GTATCC 1 cut(s) 2026
BglI GCCNNNNNGGC 1 cut(s) 195
BglII AGATCT 3 cut(s) 1024, 1420, 1515
BlpI GCTNAGC 1 cut(s) 957
BmcAI AGTACT 1 cut(s) 2287
Bme1390I CCNGG 2 cut(s) 194, 1983
Bme18I GGWCC 4 cut(s) 602, 1722, 1892, 2084
BmeRI GACNNNNNGTC 1 cut(s) 2269
BmeT110I CYCGRG 1 cut(s) 1359
BmgBI CACGTC 1 cut(s) 1315
BmgT120I GGNCC 5 cut(s) 407, 602, 1722, 1892, 2084
BmiI GGNNCC 5 cut(s) 260, 594, 603, 1673, 1796
BmrFI CCNGG 2 cut(s) 194, 1983
BmrI ACTGGG 1 cut(s) 394
BmsI GCATC 6 cut(s) 235, 347, 805, 905, 1048, 1078
BmuI ACTGGG 1 cut(s) 394
BoxI GACNNNNGTC 1 cut(s) 401
BpiI GAAGAC 3 cut(s) 623, 879, 1200
BplI GAGNNNNNCTC 2 cut(s) 1502, 1534
Bpu10I CCTNAGC 1 cut(s) 459
Bpu1102I GCTNAGC 1 cut(s) 957
Bpu14I TTCGAA 1 cut(s) 625
BpuEI CTTGAG 5 cut(s) 335, 947, 1047, 1198, 1358
BsaHI GRCGYC 2 cut(s) 9, 153
BsaI GGTCTC 1 cut(s) 2516
BsaJI CCNNGG 6 cut(s) 192, 193, 1843, 1981, 2194, 2526
BsaWI WCCGGW 1 cut(s) 31
BsaXI ACNNNNNCTCC 4 cut(s) 56, 86, 125, 155
Bsc4I CCNNNNNNNGG 4 cut(s) 147, 464, 2316, 2502
Bse1I ACTGG 4 cut(s) 389, 1575, 1642, 2087
Bse21I CCTNAGG 1 cut(s) 597
Bse3DI GCAATG 2 cut(s) 1419, 2559
BseBI CCWGG 2 cut(s) 194, 1983
BseDI CCNNGG 6 cut(s) 192, 193, 1843, 1981, 2194, 2526
BseGI GGATG 2 cut(s) 982, 2401
BseLI CCNNNNNNNGG 4 cut(s) 147, 464, 2316, 2502
BseMI GCAATG 2 cut(s) 1419, 2559
BseNI ACTGG 4 cut(s) 389, 1575, 1642, 2087
BseRI GAGGAG 4 cut(s) 77, 160, 447, 1526
BseXI GCAGC 7 cut(s) 457, 1046, 1438, 2002, 2227, 2230, 2293
BseYI CCCAGC 2 cut(s) 117, 2166
BsgI GTGCAG 5 cut(s) 435, 870, 923, 1371, 2229
BshFI GGCC 2 cut(s) 408, 2058
BshNI GGYRCC 1 cut(s) 1671
BsiHKAI GWGCWC 2 cut(s) 365, 963
BsiHKCI CYCGRG 1 cut(s) 1359
BsiSI CCGG 1 cut(s) 32
BslFI GGGAC 3 cut(s) 58, 385, 1916
BslI CCNNNNNNNGG 4 cut(s) 147, 464, 2316, 2502
BsmAI GTCTC 8 cut(s) 505, 562, 1148, 1222, 1472, 2214, 2294, 2516
BsmFI GGGAC 3 cut(s) 58, 385, 1916
BsmI GAATGC 1 cut(s) 280
BsnI GGCC 2 cut(s) 408, 2058
Bso31I GGTCTC 1 cut(s) 2516
BsoBI CYCGRG 1 cut(s) 1359
Bsp119I TTCGAA 1 cut(s) 625
Bsp1286I GDGCHC 4 cut(s) 27, 365, 595, 963
Bsp1407I TGTACA 1 cut(s) 2062
Bsp143I GATC 9 cut(s) 778, 834, 1024, 1420, 1515, 1700, 2091, 2207, 2254
Bsp1720I GCTNAGC 1 cut(s) 957
Bsp19I CCATGG 2 cut(s) 1843, 2194
BspANI GGCC 2 cut(s) 408, 2058
BspHI TCATGA 1 cut(s) 727
BspLI GGNNCC 5 cut(s) 260, 594, 603, 1673, 1796
BspMAI CTGCAG 1 cut(s) 299
BspPI GGATC 3 cut(s) 1708, 2215, 2249
BspQI GCTCTTC 2 cut(s) 996, 1254
BspT104I TTCGAA 1 cut(s) 625
BspT107I GGYRCC 1 cut(s) 1671
BspTNI GGTCTC 1 cut(s) 2516
BsrBI CCGCTC 1 cut(s) 29
BsrDI GCAATG 2 cut(s) 1419, 2559
BsrGI TGTACA 1 cut(s) 2062
BsrI ACTGG 4 cut(s) 389, 1575, 1642, 2087
BssECI CCNNGG 6 cut(s) 192, 193, 1843, 1981, 2194, 2526
BssMI GATC 9 cut(s) 778, 834, 1024, 1420, 1515, 1700, 2091, 2207, 2254
BssNI GRCGYC 2 cut(s) 9, 153
BssSI CACGAG 1 cut(s) 358
BssT1I CCWWGG 2 cut(s) 1843, 2194
Bst2BI CACGAG 1 cut(s) 358
Bst2UI CCWGG 2 cut(s) 194, 1983
Bst4CI ACNGT 6 cut(s) 639, 972, 1548, 1676, 1784, 2468
Bst6I CTCTTC 4 cut(s) 991, 996, 1254, 1812
BstACI GRCGYC 2 cut(s) 9, 153
BstAUI TGTACA 1 cut(s) 2062
BstBI TTCGAA 1 cut(s) 625
BstC8I GCNNGC 5 cut(s) 23, 27, 181, 1238, 1353
BstDSI CCRYGG 2 cut(s) 1843, 2194
BstF5I GGATG 2 cut(s) 982, 2401
BstHHI GCGC 2 cut(s) 287, 699
BstKTI GATC 9 cut(s) 781, 837, 1027, 1423, 1518, 1703, 2094, 2210, 2257
BstMAI GTCTC 8 cut(s) 505, 562, 1148, 1222, 1472, 2214, 2294, 2516
BstMBI GATC 9 cut(s) 778, 834, 1024, 1420, 1515, 1700, 2091, 2207, 2254
BstMWI GCNNNNNNNGC 7 cut(s) 110, 195, 284, 476, 515, 953, 1703
BstNI CCWGG 2 cut(s) 194, 1983
BstNSI RCATGY 3 cut(s) 1161, 1931, 1964
BstPAI GACNNNNGTC 1 cut(s) 401
BstSCI CCNGG 2 cut(s) 192, 1981
BstSFI CTRYAG 2 cut(s) 295, 513
BstV1I GCAGC 7 cut(s) 457, 1046, 1438, 2002, 2227, 2230, 2293
BstV2I GAAGAC 3 cut(s) 623, 879, 1200
BstX2I RGATCY 4 cut(s) 1024, 1420, 1515, 2207
BstYI RGATCY 4 cut(s) 1024, 1420, 1515, 2207
Bsu36I CCTNAGG 1 cut(s) 597
BsuI GTATCC 1 cut(s) 2026
BsuRI GGCC 2 cut(s) 408, 2058
BtgI CCRYGG 2 cut(s) 1843, 2194
BtrI CACGTC 1 cut(s) 1315
BtsCI GGATG 2 cut(s) 982, 2401
BtsI GCAGTG 2 cut(s) 292, 1686
Cac8I GCNNGC 5 cut(s) 23, 27, 181, 1238, 1353
CaiI CAGNNNCTG 2 cut(s) 899, 1895
CciI TCATGA 1 cut(s) 727
CfoI GCGC 2 cut(s) 287, 699
Cfr13I GGNCC 5 cut(s) 407, 602, 1722, 1892, 2084
CseI GACGC 4 cut(s) 142, 713, 2093, 2318
Csp6I GTAC 7 cut(s) 1040, 1672, 1887, 2063, 2178, 2286, 2460
CviQI GTAC 7 cut(s) 1040, 1672, 1887, 2063, 2178, 2286, 2460
DpnI GATC 9 cut(s) 780, 836, 1026, 1422, 1517, 1702, 2093, 2209, 2256
DpnII GATC 9 cut(s) 778, 834, 1024, 1420, 1515, 1700, 2091, 2207, 2254
DraIII CACNNNGTG 1 cut(s) 2342
DrdI GACNNNNNNGTC 2 cut(s) 143, 1250
DriI GACNNNNNGTC 1 cut(s) 2269
DseDI GACNNNNNNGTC 2 cut(s) 143, 1250
Eam1104I CTCTTC 4 cut(s) 991, 996, 1254, 1812
Eam1105I GACNNNNNGTC 1 cut(s) 2269
EarI CTCTTC 4 cut(s) 991, 996, 1254, 1812
EciI GGCGGA 1 cut(s) 85
Ecl136II GAGCTC 1 cut(s) 961
Eco130I CCWWGG 2 cut(s) 1843, 2194
Eco24I GRGCYC 3 cut(s) 27, 595, 963
Eco31I GGTCTC 1 cut(s) 2516
Eco32I GATATC 1 cut(s) 1789
Eco47I GGWCC 4 cut(s) 602, 1722, 1892, 2084
Eco53kI GAGCTC 1 cut(s) 961
Eco57I CTGAAG 6 cut(s) 432, 936, 1121, 1665, 1962, 2172
Eco81I CCTNAGG 1 cut(s) 597
Eco88I CYCGRG 1 cut(s) 1359
EcoICRI GAGCTC 1 cut(s) 961
EcoO109I RGGNCCY 1 cut(s) 1892
EcoRI GAATTC 3 cut(s) 548, 1405, 1826
EcoRII CCWGG 2 cut(s) 192, 1981
EcoRV GATATC 1 cut(s) 1789
EcoT14I CCWWGG 2 cut(s) 1843, 2194
EcoT38I GRGCYC 3 cut(s) 27, 595, 963
ErhI CCWWGG 2 cut(s) 1843, 2194
FalI AAGNNNNNCTT 2 cut(s) 1844, 1876
FaqI GGGAC 3 cut(s) 58, 385, 1916
FauI CCCGC 2 cut(s) 34, 188
FbaI TGATCA 1 cut(s) 778
FokI GGATG 2 cut(s) 989, 2408
FriOI GRGCYC 3 cut(s) 27, 595, 963
FspBI CTAG 6 cut(s) 1200, 1241, 1397, 1455, 1692, 1749
GlaI GCGC 2 cut(s) 286, 698
GsaI CCCAGC 2 cut(s) 121, 2170
HaeIII GGCC 2 cut(s) 408, 2058
HapII CCGG 1 cut(s) 32
HgaI GACGC 4 cut(s) 142, 713, 2093, 2318
HhaI GCGC 2 cut(s) 287, 699
Hin1I GRCGYC 2 cut(s) 9, 153
Hin6I GCGC 2 cut(s) 285, 697
HinP1I GCGC 2 cut(s) 285, 697
HincII GTYRAC 2 cut(s) 1269, 1808
HindII GTYRAC 2 cut(s) 1269, 1808
HindIII AAGCTT 2 cut(s) 945, 1133
HinfI GANTC 8 cut(s) 65, 269, 755, 1142, 2320, 2441, 2516, 2585
HpaI GTTAAC 1 cut(s) 1269
HpaII CCGG 1 cut(s) 32
HphI GGTGA 5 cut(s) 79, 151, 569, 1268, 2498
Hpy166II GTNNAC 6 cut(s) 87, 247, 1163, 1269, 1808, 2572
Hpy8I GTNNAC 6 cut(s) 87, 247, 1163, 1269, 1808, 2572
Hpy99I CGWCG 2 cut(s) 11, 14
HpyCH4III ACNGT 6 cut(s) 639, 972, 1548, 1676, 1784, 2468
HpyCH4IV ACGT 4 cut(s) 9, 238, 374, 1314
HpyF10VI GCNNNNNNNGC 7 cut(s) 110, 195, 284, 476, 515, 953, 1703
HpySE526I ACGT 4 cut(s) 9, 238, 374, 1314
Hsp92I GRCGYC 2 cut(s) 9, 153
HspAI GCGC 2 cut(s) 285, 697
KpnI GGTACC 1 cut(s) 1675
Ksp22I TGATCA 1 cut(s) 778
KspAI GTTAAC 1 cut(s) 1269
Kzo9I GATC 9 cut(s) 778, 834, 1024, 1420, 1515, 1700, 2091, 2207, 2254
LguI GCTCTTC 2 cut(s) 996, 1254
LmnI GCTCC 5 cut(s) 34, 52, 598, 1794, 2368
Lsp1109I GCAGC 7 cut(s) 457, 1046, 1438, 2002, 2227, 2230, 2293
LweI GCATC 6 cut(s) 235, 347, 805, 905, 1048, 1078
MaeI CTAG 6 cut(s) 1200, 1241, 1397, 1455, 1692, 1749
MaeII ACGT 4 cut(s) 9, 238, 374, 1314
MaeIII GTNAC 3 cut(s) 1765, 2105, 2411
MalI GATC 9 cut(s) 780, 836, 1026, 1422, 1517, 1702, 2093, 2209, 2256
MbiI CCGCTC 1 cut(s) 29
MboI GATC 9 cut(s) 778, 834, 1024, 1420, 1515, 1700, 2091, 2207, 2254
MfeI CAATTG 1 cut(s) 684
MflI RGATCY 4 cut(s) 1024, 1420, 1515, 2207
MhlI GDGCHC 4 cut(s) 27, 365, 595, 963
MlyI GAGTC 3 cut(s) 74, 278, 2435
MmeI TCCRAC 3 cut(s) 30, 954, 2572
MseI TTAA 4 cut(s) 813, 879, 1128, 1268
MslI CAYNNNNRTG 3 cut(s) 203, 732, 1782
MspA1I CMGCKG 1 cut(s) 518
MspI CCGG 1 cut(s) 32
MspR9I CCNGG 2 cut(s) 194, 1983
MunI CAATTG 1 cut(s) 684
Mva1269I GAATGC 1 cut(s) 280
MvaI CCWGG 2 cut(s) 194, 1983
MwoI GCNNNNNNNGC 7 cut(s) 110, 195, 284, 476, 515, 953, 1703
NcoI CCATGG 2 cut(s) 1843, 2194
NdeII GATC 9 cut(s) 778, 834, 1024, 1420, 1515, 1700, 2091, 2207, 2254
NlaIV GGNNCC 5 cut(s) 260, 594, 603, 1673, 1796
NmuCI GTSAC 2 cut(s) 2105, 2411
NspI RCATGY 3 cut(s) 1161, 1931, 1964
NspV TTCGAA 1 cut(s) 625
PaeR7I CTCGAG 1 cut(s) 1359
PagI TCATGA 1 cut(s) 727
PasI CCCWGGG 1 cut(s) 193
PciI ACATGT 1 cut(s) 1157
PciSI GCTCTTC 2 cut(s) 996, 1254
PcsI WCGNNNNNNNCGW 5 cut(s) 18, 141, 240, 371, 2556
PctI GAATGC 1 cut(s) 280
PfeI GAWTC 5 cut(s) 755, 1142, 2320, 2516, 2585
PflMI CCANNNNNTGG 1 cut(s) 2316
PleI GAGTC 3 cut(s) 73, 277, 2435
PpsI GAGTC 3 cut(s) 73, 277, 2435
PpuMI RGGWCCY 1 cut(s) 1892
PscI ACATGT 1 cut(s) 1157
PshAI GACNNNNGTC 1 cut(s) 401
Psp124BI GAGCTC 1 cut(s) 963
Psp5II RGGWCCY 1 cut(s) 1892
Psp6I CCWGG 2 cut(s) 192, 1981
PspFI CCCAGC 2 cut(s) 117, 2166
PspGI CCWGG 2 cut(s) 192, 1981
PspN4I GGNNCC 5 cut(s) 260, 594, 603, 1673, 1796
PspPI GGNCC 5 cut(s) 407, 602, 1722, 1892, 2084
PspPPI RGGWCCY 1 cut(s) 1892
PsrI GAACNNNNNNTAC 2 cut(s) 2278, 2310
PstI CTGCAG 1 cut(s) 299
PstNI CAGNNNCTG 2 cut(s) 899, 1895
PsuI RGATCY 4 cut(s) 1024, 1420, 1515, 2207
PvuII CAGCTG 1 cut(s) 518
RsaI GTAC 7 cut(s) 1041, 1673, 1888, 2064, 2179, 2287, 2461
RsaNI GTAC 7 cut(s) 1040, 1672, 1887, 2063, 2178, 2286, 2460
RseI CAYNNNNRTG 3 cut(s) 203, 732, 1782
SacI GAGCTC 1 cut(s) 963
SapI GCTCTTC 2 cut(s) 996, 1254
SaqAI TTAA 4 cut(s) 813, 879, 1128, 1268
Sau3AI GATC 9 cut(s) 778, 834, 1024, 1420, 1515, 1700, 2091, 2207, 2254
Sau96I GGNCC 5 cut(s) 407, 602, 1722, 1892, 2084
ScaI AGTACT 1 cut(s) 2287
SchI GAGTC 3 cut(s) 74, 278, 2435
ScrFI CCNGG 2 cut(s) 194, 1983
SduI GDGCHC 4 cut(s) 27, 365, 595, 963
SfaNI GCATC 6 cut(s) 235, 347, 805, 905, 1048, 1078
SfcI CTRYAG 2 cut(s) 295, 513
Sfr274I CTCGAG 1 cut(s) 1359
SfuI TTCGAA 1 cut(s) 625
SinI GGWCC 4 cut(s) 602, 1722, 1892, 2084
SlaI CTCGAG 1 cut(s) 1359
SmiMI CAYNNNNRTG 3 cut(s) 203, 732, 1782
SmlI CTYRAG 6 cut(s) 350, 962, 1062, 1177, 1337, 1359
SmoI CTYRAG 6 cut(s) 350, 962, 1062, 1177, 1337, 1359
SspI AATATT 2 cut(s) 1082, 1999
SspMI CTAG 6 cut(s) 1200, 1241, 1397, 1455, 1692, 1749
SstI GAGCTC 1 cut(s) 963
StyD4I CCNGG 2 cut(s) 192, 1981
StyI CCWWGG 2 cut(s) 1843, 2194
TaaI ACNGT 6 cut(s) 639, 972, 1548, 1676, 1784, 2468
TaiI ACGT 4 cut(s) 12, 241, 377, 1317
TaqI TCGA 5 cut(s) 272, 318, 625, 1282, 1360
TaqII GACCGA 1 cut(s) 2540
TatI WGTACW 4 cut(s) 1039, 2062, 2177, 2285
TauI GCSGC 6 cut(s) 101, 104, 1094, 1097, 1358, 2021
TfiI GAWTC 5 cut(s) 755, 1142, 2320, 2516, 2585
Tru1I TTAA 4 cut(s) 813, 879, 1128, 1268
Tru9I TTAA 4 cut(s) 813, 879, 1128, 1268
TseFI GTSAC 2 cut(s) 2105, 2411
TseI GCWGC 7 cut(s) 470, 1034, 1451, 2015, 2240, 2243, 2306
Tsp45I GTSAC 2 cut(s) 2105, 2411
TspGWI ACGGA 2 cut(s) 133, 662
Van91I CCANNNNNTGG 1 cut(s) 2316
VpaK11BI GGWCC 4 cut(s) 602, 1722, 1892, 2084
XapI RAATTY 3 cut(s) 548, 1405, 1826
XceI RCATGY 3 cut(s) 1161, 1931, 1964
XcmI CCANNNNNNNNNTGG 1 cut(s) 2201
XhoI CTCGAG 1 cut(s) 1359
XspI CTAG 6 cut(s) 1200, 1241, 1397, 1455, 1692, 1749
ZraI GACGTC 1 cut(s) 10
ZrmI AGTACT 1 cut(s) 2287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.