Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0005860

Physical Location & Seq

Genomic Coordinates Forward (+)

13636791 .. 13642799

Gene Structure 6009 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g16480.13

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2901 bp

ATGTGTGCGAGTGTGACAGTAAATTTGTATTATCCATTGTTGCATTTTGCACTGAGAAGACCCAAATCCCCAAGTCCCAAACTTTACAAACTTCCCAACTCACTCTCTCCACTCCACCCTCCAATCTCCCCTTCTTCCCCCAAATTTGTTCATAATTACTTAATTAGGGTTTCCAAAAACCTCCTGCGTCCTTCAATGTCTGCCGTAGGCGAAAGCGAGGTCTCCTCCAAACCCACTCCAGTCAAACCCAATGTCGCTGCGGTCACCACACCTCCACAAGCCTCCCAGTGCACCCGCCAGTTCATCACCTCAGTCGCCTCCAAGATCGCCTCCCAGCCCCTCCAGAATTACGACCCTGGCGTCTGGGGTGTCCTCACCGCCATTTCCACCCAGGCCCGCAAACGCAACCAGGGCATAAACATCCTGTTCACTGCGGATGAGCATTGGATTGGCCGAACCGTGGACGATGTACGTTTCCAGATTGATTCGACTGCGGTTAGTGGAAGGCATTGCAAGATATACAGGAAGAGGGCTGCTAATGAAGATACGAAACATACATCCGTATGCTTGAAGGACATGAGCACAAATGGGACTTATCTCAACTGGATGAAGTTGACGAAAGTTGGTGCTGAAGCTGAAGTACGTCATGGAGATATTATATCACCTTCAGCACCTCCTCAGCATGATCTTGCATATGCATTCGTATACAGAGATGTTTCACTGTCCAGTCCCAGTACAGATGGTGCATTTGCAAAAAGAAAAGCAGAGGATTTTGTCACTGATAATAAGAGAGTTAAAGGGATTGGCATTGGTTCTTCTGATGGTCCTATATCTCTTGATGATTTTCGAAGTCTTCAACGGTCAAACACGGAATTGAGGAAGCAATTGGAAAACCAAGTCGTTACAATTGATACATTGCGCAATGAGACTCGTCTAGCTGTTGAGTGTCGTGAAAACGAAAAGAAAGAACTGAGAGAATCGGTGGCAAGACCTTACCTTGATCAACTCAGTGAGTTGCAACGTGGTCTGGAGATTAAACAGAAGGAGCTGGCGGAAGCTAATAGAATATATGCAGAAACAAAGCATGCTATTGAAGACCTTAATGAAAGGCTCAGTGCTTCTGTGCAGTCATGTTCTGAAGCAAATGAAATAGTGAATAGTCAGAAAGCATCTATAGCTGAACTCAAGGCACAGTTGGATGAAGAGCGTGCTCAGAGACGAGAAGAACGAGAAAAGGCTGCAGCAGATTTGAAAGCAGCAGTGCAGAAAGCTCAATCAGAGGCTGAAGAGGATTTAAAACGATTTTCTGATGATGCCACAAGACGACAAAGAGAGCAACAAGAAGTAATTAATAAGCTTCAGGAATCAGAGAAAGAAACATGTTTGCTGGTGGAAACCTTGAGAACCAAATTGGAAGACACTAGGCAAAAGTTGGTAGTCTCTGACTATAAAGTTCGCCAGCTAGAAACCCAACTTTCCGAAGAGCAGTCAACCTCTGAAAGTCGAAAAATTAGAGCTGAAGAACTTGAACATGAGATGAGAGGACTGAGGAAGGAGCTTGAGAGTGAAAAGCAGGCAGCTCGAGAAGAAGCATGGGCTAAAGTTTCTGCACTTGAACTAGAGATAAATGCTGCTATGCGAGATCTTGATTTTGAGAGACGAAGGCTAAAAGCTGCCAGAGAAAGAATTATGCTTAGGGAGACGCAACTAAGAGCATTTTATTCTACAACCGAGGAGATTTCTGTACTGTTTACTAAACAGCAGGAACAGTTGAAATCAATGCAGAAGACGCTGGAAGACGAGGAAAATTATGACAACACATCAGCAGATATTGACCTCAATGTGGTTATTGATGATGTAACTGCACCTGAAGGCAGAGGAAATGAAGCAATCAGATACCATAGTAACATTACTGCCAAGGCAGGGTCAGCTACAACATCCCAGAGGTCTTTCAGAAATCAAGTTGTAACTTCTAGTGATGAAGTTAGTGTGACCGAGAAACATGACTGTGATATCAGAAGCCAAGAAGGTCAACATACCGAAGAGGCAGAATTTACAAGTGCAGACCTTGGTGTCAAGGGTGCCTTTGGTTCTGAGATTGATGGTGTTGGCACAGCACCCATTATGGAGGGAGACGGCATTGACACCGAGCATGTTCCTGAAACTGAAAGCCCTGGAATCAATGGCGAGCAGAATATTGATTTGAATAGAATTGTCACTTTAGAAGGGGATACAATGCAACTTGATGATGAAGCCAACGTACAAGAAAATGATGAGCAGGATCCAATGATTTGTCAGGAGCGTCACTCACAATCAAATAGCCCCCATGACACTCTCAAAGGTATGGAAGATACCGAAGCCTGTGGTACGATCAGGACAGCAGACCTTTTAGCTTCTGAAGTTATTGGTAGCTGGGCTTACAGCACAGCCCCTTCTGTGCATGGAGATAATGGCTCTCAAAGAAGCAGAGACAACAATGAGGAAGGTGCTGCTGCACCACACAACTCCACCGATCAGGTGGCCGAGAGCCAAAGTACTCCATCTTCTGATGCTGCTGCCAGAAGACGAAATCTTGAATGTCAAGCACCCAATTCCTCTTCACCCCGATTCCAAATTAGTAAACATGCCCTAAGTGAAATGATTGGGATTGTTGCTCCGGACTTAAAAGAACAGTTCGGTGGTATTGTAGATGATAGTGATCATGCGAAAGAAAAACAAGGTTCTGCATCCGACTCAGATACTGAGAGCTGTTCAGACAATGAAGAAGATAACAGAACTGATGCCAAAAGCGGATCAATTTCAGATTCAGAAACCGAGGGCAGCGAAGGGGGTGATGAAGATAAAAAATCTGGTGATGCAATGGATGAAGATGATCAAGATACAGAAGATTCTCTTAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA

Protein Analysis

967

Amino Acids

107.38

Weight (kDa)

4.93

Isoelectric Point (pI)

54.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005860)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45460 AT2G45460 AT2G45460 AT2G45460
fragaria_vesca	FvH4_7g12090 FvH4_7g12090 FvH4_7g12090 FvH4_7g12090
malus_domestica	MD02G1201400.v1.1
prunus_persica	Prupe.2G147400_v2.0.a1 Prupe.2G147400_v2.0.a1 Prupe.2G147400_v2.0.a1 Prupe.2G147400_v2.0.a1 Prupe.2G147400_v2.0.a1 Prupe.2G147400_v2.0.a1
pyrus_communis	pycom02g16480
rosa_chinensis	RchiOBHm_Chr1g0350831
rosa_laevigata	RLG00000028451
rosa_multiflora	Rmu_sc0006200.1_g000006 Rmu_sc0008251.1_g000003
rosa_roxburghii	Rroxscaffold_4G00304480
rosa_rugosa	Rorug01G0214400 Rorug01G0214500
rosa_samantha	Rh1AG228900 Rh1BG198900 Rh1CG213700 Rh1DG226800
rosa_wichuraiana	Rw1G019820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	359, 2072
Acc16I	TGCGCA	1 cut(s)	920
AccB1I	GGYRCC	1 cut(s)	2081
AccI	GTMKAC	1 cut(s)	705
AccIII	TCCGGA	1 cut(s)	2656
AciI	CCGC	8 cut(s)	260, 295, 378, 397, 434, 494, 1052, 2790
AclWI	GGATC	3 cut(s)	2276, 2289, 2800
AcoI	YGGCCR	2 cut(s)	451, 2520
AcsI	RAATTY	3 cut(s)	22, 143, 2051
AcuI	CTGAAG	9 cut(s)	651, 651, 657, 1158, 1305, 1343, 1539, 1890, 2418
AcyI	GRCGYC	1 cut(s)	360
AfaI	GTAC	7 cut(s)	471, 642, 736, 1746, 2262, 2368, 2536
AfiI	CCNNNNNNNGG	3 cut(s)	460, 1843, 1923
AflIII	ACRYGT	1 cut(s)	1379
AjnI	CCWGG	4 cut(s)	355, 390, 408, 2173
AjuI	GAANNNNNNNTTGG	2 cut(s)	115, 147
Alw21I	GWGCWC	3 cut(s)	293, 584, 1213
Alw26I	GTCTC	8 cut(s)	226, 920, 1210, 1444, 1651, 1694, 2127, 2463
Alw44I	GTGCAC	1 cut(s)	289
AlwI	GGATC	3 cut(s)	2276, 2289, 2800
AlwNI	CAGNNNCTG	2 cut(s)	1283, 2741
Ama87I	CYCGRG	1 cut(s)	1581
Aor13HI	TCCGGA	1 cut(s)	2656
AoxI	GGCC	3 cut(s)	393, 451, 2520
ApaLI	GTGCAC	1 cut(s)	289
ApoI	RAATTY	3 cut(s)	22, 143, 2051
ArsI	GACNNNNNNTTYG	6 cut(s)	7, 39, 204, 236, 237, 269
AseI	ATTAAT	1 cut(s)	1350
AspLEI	GCGC	1 cut(s)	921
AspS9I	GGNCC	2 cut(s)	394, 824
AsuHPI	GGTGA	7 cut(s)	256, 298, 367, 654, 2592, 2843, 2864
AsuII	TTCGAA	1 cut(s)	847
AvaI	CYCGRG	1 cut(s)	1581
AvaII	GGWCC	1 cut(s)	824
BaeGI	GKGCMC	1 cut(s)	293
BaeI	ACNNNNGTAYC	2 cut(s)	1888, 1921
BamHI	GGATCC	1 cut(s)	2281
BanI	GGYRCC	1 cut(s)	2081
BarI	GAAGNNNNNNTAC	6 cut(s)	624, 656, 2244, 2276, 2527, 2559
BbsI	GAAGAC	7 cut(s)	64, 845, 1101, 1422, 1793, 1803, 2569
Bbv12I	GWGCWC	3 cut(s)	293, 584, 1213
BbvCI	CCTCAGC	1 cut(s)	678
BccI	CCATC	4 cut(s)	734, 815, 2096, 2548
BceAI	ACGGC	2 cut(s)	188, 2152
BcgI	CGANNNNNNTGC	2 cut(s)	1562, 1596
BciT130I	CCWGG	4 cut(s)	357, 392, 410, 2175
BciVI	GTATCC	1 cut(s)	2224
BclI	TGATCA	3 cut(s)	1000, 2698, 2872
BcoDI	GTCTC	8 cut(s)	226, 920, 1210, 1444, 1651, 1694, 2127, 2463
BfaI	CTAG	5 cut(s)	935, 1422, 1463, 1619, 1974
BfmI	CTRYAG	2 cut(s)	1173, 1239
BfuI	GTATCC	1 cut(s)	2224
BglII	AGATCT	1 cut(s)	1642
BmcAI	AGTACT	1 cut(s)	2536
Bme1390I	CCNGG	4 cut(s)	357, 392, 410, 2175
Bme18I	GGWCC	1 cut(s)	824
BmeT110I	CYCGRG	1 cut(s)	1581
BmgT120I	GGNCC	2 cut(s)	394, 824
BmiI	GGNNCC	2 cut(s)	2083, 2283
BmrFI	CCNGG	4 cut(s)	357, 392, 410, 2175
BmrI	ACTGGG	2 cut(s)	280, 726
BmsI	GCATC	6 cut(s)	1178, 1303, 2539, 2735, 2770, 2845
BmuI	ACTGGG	2 cut(s)	280, 726
BpiI	GAAGAC	7 cut(s)	64, 845, 1101, 1422, 1793, 1803, 2569
BplI	GAGNNNNNCTC	4 cut(s)	209, 241, 2291, 2323
BpmI	CTGGAG	3 cut(s)	222, 326, 1049
Bpu10I	CCTNAGC	2 cut(s)	678, 1694
Bpu14I	TTCGAA	1 cut(s)	847
BpuEI	CTTGAG	3 cut(s)	1169, 1420, 1580
BsaBI	GATNNNNATC	1 cut(s)	2697
BsaHI	GRCGYC	1 cut(s)	360
BsaI	GGTCTC	1 cut(s)	226
BsaJI	CCNNGG	9 cut(s)	355, 390, 409, 459, 1731, 1917, 2068, 2173, 2814
BsaWI	WCCGGW	1 cut(s)	2656
BsaXI	ACNNNNNCTCC	2 cut(s)	256, 286
Bsc4I	CCNNNNNNNGG	3 cut(s)	460, 1843, 1923
Bse1I	ACTGG	6 cut(s)	239, 286, 298, 608, 726, 732
Bse3DI	GCAATG	4 cut(s)	508, 914, 928, 2865
Bse8I	GATNNNNATC	1 cut(s)	2697
BseAI	TCCGGA	1 cut(s)	2656
BseBI	CCWGG	4 cut(s)	357, 392, 410, 2175
BseDI	CCNNGG	9 cut(s)	355, 390, 409, 459, 1731, 1917, 2068, 2173, 2814
BseGI	GGATG	8 cut(s)	420, 442, 557, 612, 1204, 1937, 2726, 2869
BseJI	GATNNNNATC	1 cut(s)	2697
BseLI	CCNNNNNNNGG	3 cut(s)	460, 1843, 1923
BseMI	GCAATG	4 cut(s)	508, 914, 928, 2865
BseNI	ACTGG	6 cut(s)	239, 286, 298, 608, 726, 732
BseRI	GAGGAG	3 cut(s)	214, 666, 1748
BseSI	GKGCMC	1 cut(s)	293
BseYI	CCCAGC	2 cut(s)	333, 2412
BsgI	GTGCAG	6 cut(s)	1145, 1283, 1593, 1848, 2082, 2478
BshFI	GGCC	3 cut(s)	395, 453, 2522
BshNI	GGYRCC	1 cut(s)	2081
BsiHKAI	GWGCWC	3 cut(s)	293, 584, 1213
BsiHKCI	CYCGRG	1 cut(s)	1581
BsiSI	CCGG	1 cut(s)	2657
BslFI	GGGAC	3 cut(s)	60, 604, 714
BslI	CCNNNNNNNGG	3 cut(s)	460, 1843, 1923
BsmAI	GTCTC	8 cut(s)	226, 920, 1210, 1444, 1651, 1694, 2127, 2463
BsmBI	CGTCTC	4 cut(s)	1210, 1651, 1694, 2127
BsmFI	GGGAC	3 cut(s)	60, 604, 714
BsmI	GAATGC	1 cut(s)	698
BsnI	GGCC	3 cut(s)	395, 453, 2522
Bso31I	GGTCTC	1 cut(s)	226
BsoBI	CYCGRG	1 cut(s)	1581
Bsp119I	TTCGAA	1 cut(s)	847
Bsp1286I	GDGCHC	3 cut(s)	293, 584, 1213
Bsp13I	TCCGGA	1 cut(s)	2656
BspACI	CCGC	8 cut(s)	260, 295, 378, 397, 434, 494, 1052, 2790
BspANI	GGCC	3 cut(s)	395, 453, 2522
BspEI	TCCGGA	1 cut(s)	2656
BspLI	GGNNCC	2 cut(s)	2083, 2283
BspMAI	CTGCAG	1 cut(s)	1243
BspPI	GGATC	3 cut(s)	2276, 2289, 2800
BspQI	GCTCTTC	2 cut(s)	1197, 1476
BspT104I	TTCGAA	1 cut(s)	847
BspT107I	GGYRCC	1 cut(s)	2081
BspTNI	GGTCTC	1 cut(s)	226
BsrDI	GCAATG	4 cut(s)	508, 914, 928, 2865
BsrI	ACTGG	6 cut(s)	239, 286, 298, 608, 726, 732
BssECI	CCNNGG	9 cut(s)	355, 390, 409, 459, 1731, 1917, 2068, 2173, 2814
BssNAI	GTATAC	1 cut(s)	706
BssNI	GRCGYC	1 cut(s)	360
BssT1I	CCWWGG	2 cut(s)	1917, 2068
Bst1107I	GTATAC	1 cut(s)	706
Bst2UI	CCWGG	4 cut(s)	357, 392, 410, 2175
Bst4CI	ACNGT	9 cut(s)	19, 460, 723, 861, 1194, 1749, 1770, 2009, 2673
Bst6I	CTCTTC	6 cut(s)	521, 1197, 1281, 1476, 2037, 2602
BstACI	GRCGYC	1 cut(s)	360
BstBI	TTCGAA	1 cut(s)	847
BstC8I	GCNNGC	7 cut(s)	397, 1050, 1086, 1209, 1460, 1575, 2189
BstDSI	CCRYGG	1 cut(s)	459
BstEII	GGTNACC	1 cut(s)	262
BstF5I	GGATG	8 cut(s)	420, 442, 557, 612, 1204, 1937, 2726, 2869
BstHHI	GCGC	1 cut(s)	921
BstMAI	GTCTC	8 cut(s)	226, 920, 1210, 1444, 1651, 1694, 2127, 2463
BstMWI	GCNNNNNNNGC	4 cut(s)	411, 1175, 1789, 1928
BstNI	CCWGG	4 cut(s)	357, 392, 410, 2175
BstNSI	RCATGY	4 cut(s)	1088, 1383, 2156, 2627
BstPI	GGTNACC	1 cut(s)	262
BstSCI	CCNGG	4 cut(s)	355, 390, 408, 2173
BstSFI	CTRYAG	2 cut(s)	1173, 1239
BstSLI	GKGCMC	1 cut(s)	293
BstV2I	GAAGAC	7 cut(s)	64, 845, 1101, 1422, 1793, 1803, 2569
BstX2I	RGATCY	2 cut(s)	1642, 2281
BstYI	RGATCY	2 cut(s)	1642, 2281
BstZ17I	GTATAC	1 cut(s)	706
BsuI	GTATCC	1 cut(s)	2224
BsuRI	GGCC	3 cut(s)	395, 453, 2522
BtgI	CCRYGG	1 cut(s)	459
BtsCI	GGATG	8 cut(s)	420, 442, 557, 612, 1204, 1937, 2726, 2869
BtsI	GCAGTG	2 cut(s)	429, 1266
BtsIMutI	CAGTG	8 cut(s)	50, 293, 429, 719, 777, 1015, 1120, 1266
Cac8I	GCNNGC	7 cut(s)	397, 1050, 1086, 1209, 1460, 1575, 2189
CaiI	CAGNNNCTG	2 cut(s)	1283, 2741
CfoI	GCGC	1 cut(s)	921
Cfr13I	GGNCC	2 cut(s)	394, 824
CseI	GACGC	5 cut(s)	176, 349, 1711, 1798, 2291
Csp6I	GTAC	7 cut(s)	470, 641, 735, 1745, 2261, 2367, 2535
CviQI	GTAC	7 cut(s)	470, 641, 735, 1745, 2261, 2367, 2535
DraI	TTTAAA	1 cut(s)	1296
DrdI	GACNNNNNNGTC	2 cut(s)	359, 2072
DseDI	GACNNNNNNGTC	2 cut(s)	359, 2072
EaeI	YGGCCR	2 cut(s)	451, 2520
Eam1104I	CTCTTC	6 cut(s)	521, 1197, 1281, 1476, 2037, 2602
EarI	CTCTTC	6 cut(s)	521, 1197, 1281, 1476, 2037, 2602
EciI	GGCGGA	1 cut(s)	1067
Eco130I	CCWWGG	2 cut(s)	1917, 2068
Eco31I	GGTCTC	1 cut(s)	226
Eco32I	GATATC	1 cut(s)	2014
Eco47I	GGWCC	1 cut(s)	824
Eco57I	CTGAAG	9 cut(s)	651, 651, 657, 1158, 1305, 1343, 1539, 1890, 2418
Eco88I	CYCGRG	1 cut(s)	1581
Eco91I	GGTNACC	1 cut(s)	262
EcoO65I	GGTNACC	1 cut(s)	262
EcoRII	CCWGG	4 cut(s)	355, 390, 408, 2173
EcoRV	GATATC	1 cut(s)	2014
EcoT14I	CCWWGG	2 cut(s)	1917, 2068
EcoT22I	ATGCAT	1 cut(s)	700
ErhI	CCWWGG	2 cut(s)	1917, 2068
Esp3I	CGTCTC	4 cut(s)	1210, 1651, 1694, 2127
FalI	AAGNNNNNCTT	3 cut(s)	2069, 2101, 2877
FaqI	GGGAC	3 cut(s)	60, 604, 714
FauI	CCCGC	2 cut(s)	302, 404
FauNDI	CATATG	1 cut(s)	694
FbaI	TGATCA	3 cut(s)	1000, 2698, 2872
FblI	GTMKAC	1 cut(s)	705
FokI	GGATG	8 cut(s)	407, 449, 544, 619, 1211, 1924, 2713, 2876
FspBI	CTAG	5 cut(s)	935, 1422, 1463, 1619, 1974
FspI	TGCGCA	1 cut(s)	920
GlaI	GCGC	1 cut(s)	920
GsaI	CCCAGC	2 cut(s)	337, 2416
GsuI	CTGGAG	3 cut(s)	222, 326, 1049
HaeIII	GGCC	3 cut(s)	395, 453, 2522
HapII	CCGG	1 cut(s)	2657
HgaI	GACGC	5 cut(s)	176, 349, 1711, 1798, 2291
HhaI	GCGC	1 cut(s)	921
Hin1I	GRCGYC	1 cut(s)	360
Hin6I	GCGC	1 cut(s)	919
HinP1I	GCGC	1 cut(s)	919
HincII	GTYRAC	3 cut(s)	615, 1491, 2033
HindII	GTYRAC	3 cut(s)	615, 1491, 2033
HindIII	AAGCTT	1 cut(s)	1355
HinfI	GANTC	9 cut(s)	485, 928, 977, 1364, 2178, 2607, 2732, 2804, 2888
HpaII	CCGG	1 cut(s)	2657
HphI	GGTGA	7 cut(s)	256, 298, 367, 654, 2592, 2843, 2864
Hpy166II	GTNNAC	9 cut(s)	291, 429, 463, 615, 706, 1491, 1752, 2033, 2621
Hpy8I	GTNNAC	9 cut(s)	291, 429, 463, 615, 706, 1491, 1752, 2033, 2621
HpyCH4III	ACNGT	9 cut(s)	19, 460, 723, 861, 1194, 1749, 1770, 2009, 2673
HpyCH4IV	ACGT	4 cut(s)	472, 643, 1021, 2259
HpyF10VI	GCNNNNNNNGC	4 cut(s)	411, 1175, 1789, 1928
HpySE526I	ACGT	4 cut(s)	472, 643, 1021, 2259
Hsp92I	GRCGYC	1 cut(s)	360
HspAI	GCGC	1 cut(s)	919
Kpn2I	TCCGGA	1 cut(s)	2656
Ksp22I	TGATCA	3 cut(s)	1000, 2698, 2872
LguI	GCTCTTC	2 cut(s)	1197, 1476
LmnI	GCTCC	4 cut(s)	1045, 1555, 2299, 2659
LweI	GCATC	6 cut(s)	1178, 1303, 2539, 2735, 2770, 2845
MaeI	CTAG	5 cut(s)	935, 1422, 1463, 1619, 1974
MaeII	ACGT	4 cut(s)	472, 643, 1021, 2259
MfeI	CAATTG	2 cut(s)	884, 906
MflI	RGATCY	2 cut(s)	1642, 2281
MhlI	GDGCHC	3 cut(s)	293, 584, 1213
MlyI	GAGTC	2 cut(s)	922, 2726
MmeI	TCCRAC	2 cut(s)	1176, 2754
Mph1103I	ATGCAT	1 cut(s)	700
MroI	TCCGGA	1 cut(s)	2656
MseI	TTAA	7 cut(s)	161, 795, 1035, 1101, 1295, 1350, 2663
MslI	CAYNNNNRTG	2 cut(s)	562, 2007
MspI	CCGG	1 cut(s)	2657
MspR9I	CCNGG	4 cut(s)	357, 392, 410, 2175
MunI	CAATTG	2 cut(s)	884, 906
Mva1269I	GAATGC	1 cut(s)	698
MvaI	CCWGG	4 cut(s)	357, 392, 410, 2175
MwoI	GCNNNNNNNGC	4 cut(s)	411, 1175, 1789, 1928
NdeI	CATATG	1 cut(s)	694
NlaIV	GGNNCC	2 cut(s)	2083, 2283
NmeAIII	GCCGAG	1 cut(s)	2548
NmuCI	GTSAC	6 cut(s)	13, 262, 775, 1990, 2215, 2303
NsbI	TGCGCA	1 cut(s)	920
NsiI	ATGCAT	1 cut(s)	700
NspI	RCATGY	4 cut(s)	1088, 1383, 2156, 2627
NspV	TTCGAA	1 cut(s)	847
PaeI	GCATGC	1 cut(s)	1088
PaeR7I	CTCGAG	1 cut(s)	1581
PciI	ACATGT	1 cut(s)	1379
PciSI	GCTCTTC	2 cut(s)	1197, 1476
PcsI	WCGNNNNNNNCGW	2 cut(s)	357, 1225
PctI	GAATGC	1 cut(s)	698
PfeI	GAWTC	7 cut(s)	485, 977, 1364, 2178, 2607, 2804, 2888
PleI	GAGTC	2 cut(s)	922, 2726
PpsI	GAGTC	2 cut(s)	922, 2726
PscI	ACATGT	1 cut(s)	1379
PshBI	ATTAAT	1 cut(s)	1350
Psp6I	CCWGG	4 cut(s)	355, 390, 408, 2173
PspEI	GGTNACC	1 cut(s)	262
PspFI	CCCAGC	2 cut(s)	333, 2412
PspGI	CCWGG	4 cut(s)	355, 390, 408, 2173
PspN4I	GGNNCC	2 cut(s)	2083, 2283
PspPI	GGNCC	2 cut(s)	394, 824
PstI	CTGCAG	1 cut(s)	1243
PstNI	CAGNNNCTG	2 cut(s)	1283, 2741
PsuI	RGATCY	2 cut(s)	1642, 2281
RsaI	GTAC	7 cut(s)	471, 642, 736, 1746, 2262, 2368, 2536
RsaNI	GTAC	7 cut(s)	470, 641, 735, 1745, 2261, 2367, 2535
RseI	CAYNNNNRTG	2 cut(s)	562, 2007
SapI	GCTCTTC	2 cut(s)	1197, 1476
SaqAI	TTAA	7 cut(s)	161, 795, 1035, 1101, 1295, 1350, 2663
Sau96I	GGNCC	2 cut(s)	394, 824
ScaI	AGTACT	1 cut(s)	2536
SchI	GAGTC	2 cut(s)	922, 2726
ScrFI	CCNGG	4 cut(s)	357, 392, 410, 2175
SduI	GDGCHC	3 cut(s)	293, 584, 1213
SfaNI	GCATC	6 cut(s)	1178, 1303, 2539, 2735, 2770, 2845
SfcI	CTRYAG	2 cut(s)	1173, 1239
Sfr274I	CTCGAG	1 cut(s)	1581
SfuI	TTCGAA	1 cut(s)	847
SinI	GGWCC	1 cut(s)	824
SlaI	CTCGAG	1 cut(s)	1581
SmiMI	CAYNNNNRTG	2 cut(s)	562, 2007
SmlI	CTYRAG	4 cut(s)	1184, 1399, 1559, 1581
SmoI	CTYRAG	4 cut(s)	1184, 1399, 1559, 1581
SphI	GCATGC	1 cut(s)	1088
SsiI	CCGC	8 cut(s)	260, 295, 378, 397, 434, 494, 1052, 2790
SspI	AATATT	1 cut(s)	2197
SspMI	CTAG	5 cut(s)	935, 1422, 1463, 1619, 1974
StyD4I	CCNGG	4 cut(s)	355, 390, 408, 2173
StyI	CCWWGG	2 cut(s)	1917, 2068
TaaI	ACNGT	9 cut(s)	19, 460, 723, 861, 1194, 1749, 1770, 2009, 2673
TaiI	ACGT	4 cut(s)	475, 646, 1024, 2262
TaqI	TCGA	4 cut(s)	488, 847, 1504, 1582
TaqII	GACCGA	1 cut(s)	2009
TatI	WGTACW	3 cut(s)	734, 1744, 2534
TfiI	GAWTC	7 cut(s)	485, 977, 1364, 2178, 2607, 2804, 2888
Tru1I	TTAA	7 cut(s)	161, 795, 1035, 1101, 1295, 1350, 2663
Tru9I	TTAA	7 cut(s)	161, 795, 1035, 1101, 1295, 1350, 2663
TscAI	CASTG	8 cut(s)	57, 293, 436, 726, 784, 1015, 1120, 1266
TseFI	GTSAC	6 cut(s)	13, 262, 775, 1990, 2215, 2303
Tsp45I	GTSAC	6 cut(s)	13, 262, 775, 1990, 2215, 2303
TspGWI	ACGGA	2 cut(s)	550, 884
TspRI	CASTG	8 cut(s)	57, 293, 436, 726, 784, 1015, 1120, 1266
VneI	GTGCAC	1 cut(s)	289
VpaK11BI	GGWCC	1 cut(s)	824
VspI	ATTAAT	1 cut(s)	1350
XapI	RAATTY	3 cut(s)	22, 143, 2051
XceI	RCATGY	4 cut(s)	1088, 1383, 2156, 2627
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2515
XhoI	CTCGAG	1 cut(s)	1581
XmiI	GTMKAC	1 cut(s)	705
XspI	CTAG	5 cut(s)	935, 1422, 1463, 1619, 1974
ZrmI	AGTACT	1 cut(s)	2536
Zsp2I	ATGCAT	1 cut(s)	700

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.