Rroxscaffold_4G00304480

Forkhead associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0005860
Physical Location & Seq
Forward (+)
25115595 .. 25121839
6245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00304480.1

Sequence Viewer

Length: 2604 bp
ATGTCCGACGTCGGCGAAAGCGAGCCCGCTCCTCTAAAGCCCAACGGGCCCGTGCGCTCCGAGGAGTCCATGTCCCCCATGCAGTTCACCACCTCCGCCGCCGCCAAAATCGCCTCCCAGCCTCTCCCCACCTACGACCCCTCCGTCTGGGGCGTCCTCACCGCCATCTCCTCCAACGCCCGCAAACGCCCCCAGGGCATAAATATGCTATTGACTTCCAATGAGAATCAAATTGGACGATGCGTAGCCGATAAGCGGTTCCAGATTGAGTCGACTGCCATTAGTGCAAATCACTGCAAGATATATAGGAAGAAGGTTGATGAAGATGCCAAGTCTGCATCAGTCTTCCTCAAGGACACAAGCACGAATGGGACGTACCTCAACTGGGAGAAGCTCACAAAAGTTGGCCCTGAAGTTGAAGTACGTCATGGCGACATTATCTCGCTTGCTGCACCTCCTCAGCATGGTGTTGCATTTGCATTTGTATTTAGAGAAGTTGTCTCCAATGCCAGTACAGCTGGTGCTCTTGCAAAGAGAAAAGCAGATGAGTTTGCTGGTGAGAACAAGAGACTGAAAGGTATTGGCATTGGGGCTCCTGAGGGTCCAATATCTCTTGATGATTTTCGAAGTCTTCAACGGTCCAACACGGAATTGAGGAAGCAATTAGAAAGTCAAGTCATTACAATTGATAGGTTGCGCAGTGACAATCGTTTGGCTGTTGAGCATCATGAAAATGAAAAAAGAGAACTGAAAGAATCACTTGCAAAACCTTACCTTGATCAACTGAAAGAGTTGCATCATGTTGTGGAGGTTAATCAGAAGGAGGTGGTAGAGATCAATAAGATATGTGCAGAACAAAGATATGCTCTCGAAGACCTTAATGAAAGGCTTACAGCTTCTGTGCAGTCATGCACTGAAGCAAATGAAATAATGAATACTCAGAAAGCTTCTCTGGCTGAGCTCAAGGCACAGTTGGATGAAGAGCGAGATCAGAGAAGAGAAGAGCGAGGAAAGGCTGCAGTAGATCTAAAAGCAGCAGTACATAAAGCTCAATCAGATGCTCAAGAGGAACTAAAACAATATTCTGATGCTGCCACAAGACGAGAGAGAGAGCAACAAGAAGTAATTAACAAGCTTCAGGAATCAGAGAGAGAGGCGTGTTTACTAATAGAGAACTTGAGAACAAAATTGGAAGACACTAGGCAAAAGTTGGTAGTCTCTGAAAATAAAAATCGCCAGCTAGACACCCAAGTTTGCGAAGAGCAGTCAACCTCTGATAGTCGAAAAAAGAGAGTGGAAGAACTTGAACATGAGATGAAAGGACTGAGGAAAGAGCTCGAGAGTGAAAAGGCGGCTCGAGAAGAAGCATGGGCTAAAGTTTCTGCCCTTGAACTAGAGATGAATTCTGCAATGCAGGATCTTGATTTTGAGAGACGAAAATTGAAGGCTGCTAGAGAAAGAATAATGCTTCGGGAGACACAACTAAGGGCATTTTATTCCACAACTGAGGAGATTTCTGTACTGTTTGCTAAACAGCAGGAACAGTTGAAATCGATGCAGAGGACACTGGAAGATGAGGAAAATTATGATAACACATCAGTTGATTTTGACCTCAATGTTATTGGGGATACAACTGGAACTGAAGGCAGAGATGATAAAGTAATCAGGTACCGAAGAAACAACACTGCTAGGGCAGGGTCAGCAACAACACCGCAGAGGTCCAATGGAAATCAAATTGGAACATCTAGTGAAGAAGTCAGTGTTACTGAGAAGCATGACTGTGATATCAGAAGCCAACAAGGTGAACATACCGAAGAGGCTGAATTCACTAGTGCAAACCATGGTGTCAAGGGTGGCTTTGGTTCTGACATTGATGGTATTGGTACAGGACCTGTTATGGAGGGAGATGGCATTGGCACTGAGCATGTTCCTGAAACTGAAGGCATTGACACTGAGCATGTTCCTGAAACGGAGAGCCCTGGAATGATTGGTGACGAAAATATTGATTTGAACAAGATTGCCACTATGGAAGGGGATACAATGCAAATTGATGAGGAAGGCCATGTACAAGGAAATGATGAGAAAGTTCCATTGATTTTTCAGCAGCTTCACTCTCAATCAAACACAATCAGGACAGCAGACCTTATAGCTTCTGAAGCTATTGGTAGCTGGGCTTGTAGCACAGCCCCTTCTGTCCATGGAGAAAATGGATCTCCAAGAAGTAGAGACAACAATGAGGAAGGTGCTTCTGCACCACACGATCCGATTGACAGGGTGGCTGAGAGCCAAAGTACTCCGTCTTCTGAGACTGCTGCCACAAGACGGAATCGTGAGCGTCAAGCACTGAGTGAAATGATTGGGATAGTTGCTCCCGACTTAAAAGAACAGTTCGGTAATGTGGATGATAGTTATGATAATGAGAGAAGAAAGCAGGCTTCTACATCTGACTCAGATACCGAGAGTTGTACAAACAGTGAAGATAATAACAAAGTTGAAGCTGCCGAAGGTGATTCAATGTCAGACTCAGAGACCGAGGGTAGTGATCGGGTTAATAACGCAATGGATGAAGATGGTGTGGATACAGAAGAAGATTCCGTTGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FHA

Protein Analysis

867

Amino Acids

96.3

Weight (kDa)

4.81

Isoelectric Point (pI)

50.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FHA PF00498 78 - 149 5.9e-11 FHA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 143
AatII GACGTC 1 cut(s) 12
Acc16I TGCGCA 1 cut(s) 698
Acc65I GGTACC 1 cut(s) 1668
AccB1I GGYRCC 1 cut(s) 1668
AccBSI CCGCTC 1 cut(s) 29
AccI GTMKAC 1 cut(s) 272
AciI CCGC 9 cut(s) 27, 96, 99, 102, 162, 181, 256, 1352, 1712
AclWI GGATC 3 cut(s) 1425, 2218, 2255
AcsI RAATTY 2 cut(s) 1402, 1823
AcuI CTGAAG 6 cut(s) 432, 936, 1121, 1662, 1959, 2175
AcyI GRCGYC 2 cut(s) 9, 153
AdeI CACNNNGTG 1 cut(s) 2348
AfiI CCNNNNNNNGG 5 cut(s) 147, 255, 385, 464, 2322
AgsI TTSAA 9 cut(s) 419, 635, 1307, 1391, 1444, 1549, 2011, 2495, 2514
AhlI ACTAGT 1 cut(s) 1829
AjnI CCWGG 2 cut(s) 192, 1978
AjuI GAANNNNNNNTTGG 1 cut(s) 2580
Alw21I GWGCWC 3 cut(s) 526, 963, 1338
Alw26I GTCTC 8 cut(s) 505, 562, 1222, 1426, 1469, 2220, 2300, 2522
AlwI GGATC 3 cut(s) 1425, 2218, 2255
AlwNI CAGNNNCTG 2 cut(s) 899, 1892
Ama87I CYCGRG 2 cut(s) 1337, 1356
AoxI GGCC 3 cut(s) 47, 406, 2059
ApaI GGGCCC 1 cut(s) 51
ApeKI GCWGC 8 cut(s) 449, 1016, 1034, 1091, 1448, 2104, 2312, 2498
ApoI RAATTY 2 cut(s) 1402, 1823
Asp718I GGTACC 1 cut(s) 1668
AspLEI GCGC 2 cut(s) 57, 699
AspS9I GGNCC 7 cut(s) 47, 48, 407, 602, 639, 1719, 1889
AsuHPI GGTGA 6 cut(s) 79, 151, 569, 1814, 2003, 2519
AsuII TTCGAA 1 cut(s) 625
AvaI CYCGRG 2 cut(s) 1337, 1356
AvaII GGWCC 4 cut(s) 602, 639, 1719, 1889
AxyI CCTNAGG 1 cut(s) 597
BaeGI GKGCMC 1 cut(s) 51
BanI GGYRCC 1 cut(s) 1668
BanII GRGCYC 6 cut(s) 27, 51, 595, 963, 1338, 1979
BarI GAAGNNNNNNTAC 6 cut(s) 405, 437, 2049, 2081, 2284, 2316
BbsI GAAGAC 5 cut(s) 337, 623, 879, 1200, 2292
Bbv12I GWGCWC 3 cut(s) 526, 963, 1338
BbvCI CCTCAGC 1 cut(s) 459
BbvI GCAGC 8 cut(s) 436, 1003, 1046, 1078, 1435, 2116, 2299, 2485
BccI CCATC 4 cut(s) 173, 1868, 1901, 2564
BciT130I CCWGG 2 cut(s) 194, 1980
BciVI GTATCC 3 cut(s) 1621, 2029, 2572
BclI TGATCA 1 cut(s) 778
BcoDI GTCTC 8 cut(s) 505, 562, 1222, 1426, 1469, 2220, 2300, 2522
BcuI ACTAGT 1 cut(s) 1829
BfaI CTAG 7 cut(s) 1200, 1241, 1394, 1452, 1689, 1746, 1830
BfmI CTRYAG 1 cut(s) 1017
BfuI GTATCC 3 cut(s) 1621, 2029, 2572
BglI GCCNNNNNGGC 2 cut(s) 46, 195
BglII AGATCT 1 cut(s) 1024
BlpI GCTNAGC 1 cut(s) 957
BmcAI AGTACT 1 cut(s) 2293
Bme1390I CCNGG 2 cut(s) 194, 1980
Bme18I GGWCC 4 cut(s) 602, 639, 1719, 1889
BmeT110I CYCGRG 2 cut(s) 1337, 1356
BmgT120I GGNCC 7 cut(s) 47, 48, 407, 602, 639, 1719, 1889
BmiI GGNNCC 5 cut(s) 49, 260, 594, 603, 1670
BmrFI CCNGG 2 cut(s) 194, 1980
BmrI ACTGGG 1 cut(s) 394
BmsI GCATC 8 cut(s) 230, 316, 347, 733, 805, 1048, 1078, 1545
BmuI ACTGGG 1 cut(s) 394
BpiI GAAGAC 5 cut(s) 337, 623, 879, 1200, 2292
Bpu10I CCTNAGC 1 cut(s) 459
Bpu1102I GCTNAGC 1 cut(s) 957
Bpu14I TTCGAA 1 cut(s) 625
BpuEI CTTGAG 4 cut(s) 335, 947, 1047, 1198
Bsa29I ATCGAT 1 cut(s) 1553
BsaHI GRCGYC 2 cut(s) 9, 153
BsaI GGTCTC 1 cut(s) 2522
BsaJI CCNNGG 7 cut(s) 60, 192, 193, 1840, 1978, 2197, 2532
BsaXI ACNNNNNCTCC 4 cut(s) 56, 86, 125, 155
Bsc4I CCNNNNNNNGG 5 cut(s) 147, 255, 385, 464, 2322
Bse1I ACTGG 4 cut(s) 389, 510, 1572, 1639
Bse21I CCTNAGG 1 cut(s) 597
Bse3DI GCAATG 2 cut(s) 1416, 2565
BseBI CCWGG 2 cut(s) 194, 1980
BseCI ATCGAT 1 cut(s) 1553
BseDI CCNNGG 7 cut(s) 60, 192, 193, 1840, 1978, 2197, 2532
BseGI GGATG 3 cut(s) 982, 2407, 2569
BseLI CCNNNNNNNGG 5 cut(s) 147, 255, 385, 464, 2322
BseMI GCAATG 2 cut(s) 1416, 2565
BseNI ACTGG 4 cut(s) 389, 510, 1572, 1639
BseRI GAGGAG 5 cut(s) 21, 77, 160, 447, 1523
BseSI GKGCMC 1 cut(s) 51
BseXI GCAGC 8 cut(s) 436, 1003, 1046, 1078, 1435, 2116, 2299, 2485
BseYI CCCAGC 2 cut(s) 117, 2169
BsgI GTGCAG 4 cut(s) 435, 870, 923, 2235
BshFI GGCC 3 cut(s) 49, 408, 2061
BshNI GGYRCC 1 cut(s) 1668
BshVI ATCGAT 1 cut(s) 1553
BsiHKAI GWGCWC 3 cut(s) 526, 963, 1338
BsiHKCI CYCGRG 2 cut(s) 1337, 1356
BslFI GGGAC 2 cut(s) 58, 385
BslI CCNNNNNNNGG 5 cut(s) 147, 255, 385, 464, 2322
BsmAI GTCTC 8 cut(s) 505, 562, 1222, 1426, 1469, 2220, 2300, 2522
BsmBI CGTCTC 1 cut(s) 1426
BsmFI GGGAC 2 cut(s) 58, 385
BsnI GGCC 3 cut(s) 49, 408, 2061
Bso31I GGTCTC 1 cut(s) 2522
BsoBI CYCGRG 2 cut(s) 1337, 1356
Bsp119I TTCGAA 1 cut(s) 625
Bsp120I GGGCCC 1 cut(s) 47
Bsp1286I GDGCHC 7 cut(s) 27, 51, 526, 595, 963, 1338, 1979
Bsp1407I TGTACA 2 cut(s) 2065, 2465
Bsp143I GATC 8 cut(s) 778, 834, 988, 1024, 1417, 2210, 2260, 2542
Bsp1720I GCTNAGC 1 cut(s) 957
Bsp19I CCATGG 2 cut(s) 1840, 2197
BspACI CCGC 9 cut(s) 27, 96, 99, 102, 162, 181, 256, 1352, 1712
BspANI GGCC 3 cut(s) 49, 408, 2061
BspDI ATCGAT 1 cut(s) 1553
BspHI TCATGA 1 cut(s) 727
BspLI GGNNCC 5 cut(s) 49, 260, 594, 603, 1670
BspMAI CTGCAG 1 cut(s) 1021
BspPI GGATC 3 cut(s) 1425, 2218, 2255
BspQI GCTCTTC 3 cut(s) 975, 996, 1254
BspT104I TTCGAA 1 cut(s) 625
BspT107I GGYRCC 1 cut(s) 1668
BspTNI GGTCTC 1 cut(s) 2522
BsrBI CCGCTC 1 cut(s) 29
BsrDI GCAATG 2 cut(s) 1416, 2565
BsrGI TGTACA 2 cut(s) 2065, 2465
BsrI ACTGG 4 cut(s) 389, 510, 1572, 1639
BssECI CCNNGG 7 cut(s) 60, 192, 193, 1840, 1978, 2197, 2532
BssMI GATC 8 cut(s) 778, 834, 988, 1024, 1417, 2210, 2260, 2542
BssNI GRCGYC 2 cut(s) 9, 153
BssT1I CCWWGG 2 cut(s) 1840, 2197
Bst2UI CCWGG 2 cut(s) 194, 1980
Bst4CI ACNGT 7 cut(s) 639, 972, 1524, 1545, 1781, 2388, 2474
Bst6I CTCTTC 5 cut(s) 975, 991, 996, 1254, 1809
BstACI GRCGYC 2 cut(s) 9, 153
BstAUI TGTACA 2 cut(s) 2065, 2465
BstBI TTCGAA 1 cut(s) 625
BstC8I GCNNGC 6 cut(s) 23, 27, 181, 447, 1238, 2433
BstDSI CCRYGG 2 cut(s) 1840, 2197
BstF5I GGATG 3 cut(s) 982, 2407, 2569
BstHHI GCGC 2 cut(s) 57, 699
BstKTI GATC 8 cut(s) 781, 837, 991, 1027, 1420, 2213, 2263, 2545
BstMAI GTCTC 8 cut(s) 505, 562, 1222, 1426, 1469, 2220, 2300, 2522
BstMBI GATC 8 cut(s) 778, 834, 988, 1024, 1417, 2210, 2260, 2542
BstMWI GCNNNNNNNGC 9 cut(s) 46, 110, 195, 284, 335, 515, 953, 1700, 2156
BstNI CCWGG 2 cut(s) 194, 1980
BstNSI RCATGY 2 cut(s) 1928, 1961
BstSCI CCNGG 2 cut(s) 192, 1978
BstSFI CTRYAG 1 cut(s) 1017
BstSLI GKGCMC 1 cut(s) 51
BstV1I GCAGC 8 cut(s) 436, 1003, 1046, 1078, 1435, 2116, 2299, 2485
BstV2I GAAGAC 5 cut(s) 337, 623, 879, 1200, 2292
BstX2I RGATCY 3 cut(s) 1024, 1417, 2210
BstYI RGATCY 3 cut(s) 1024, 1417, 2210
Bsu15I ATCGAT 1 cut(s) 1553
Bsu36I CCTNAGG 1 cut(s) 597
BsuI GTATCC 3 cut(s) 1621, 2029, 2572
BsuRI GGCC 3 cut(s) 49, 408, 2061
BsuTUI ATCGAT 1 cut(s) 1553
BtgI CCRYGG 2 cut(s) 1840, 2197
BtsCI GGATG 3 cut(s) 982, 2407, 2569
BtsI GCAGTG 3 cut(s) 292, 706, 1683
Cac8I GCNNGC 6 cut(s) 23, 27, 181, 447, 1238, 2433
CaiI CAGNNNCTG 2 cut(s) 899, 1892
CciI TCATGA 1 cut(s) 727
CfoI GCGC 2 cut(s) 57, 699
Cfr13I GGNCC 7 cut(s) 47, 48, 407, 602, 639, 1719, 1889
ClaI ATCGAT 1 cut(s) 1553
CseI GACGC 2 cut(s) 142, 2324
DpnI GATC 8 cut(s) 780, 836, 990, 1026, 1419, 2212, 2262, 2544
DpnII GATC 8 cut(s) 778, 834, 988, 1024, 1417, 2210, 2260, 2542
DraIII CACNNNGTG 1 cut(s) 2348
DrdI GACNNNNNNGTC 1 cut(s) 143
DseDI GACNNNNNNGTC 1 cut(s) 143
Eam1104I CTCTTC 5 cut(s) 975, 991, 996, 1254, 1809
EarI CTCTTC 5 cut(s) 975, 991, 996, 1254, 1809
EciI GGCGGA 1 cut(s) 85
Ecl136II GAGCTC 2 cut(s) 961, 1336
Eco130I CCWWGG 2 cut(s) 1840, 2197
Eco24I GRGCYC 6 cut(s) 27, 51, 595, 963, 1338, 1979
Eco31I GGTCTC 1 cut(s) 2522
Eco32I GATATC 1 cut(s) 1786
Eco47I GGWCC 4 cut(s) 602, 639, 1719, 1889
Eco53kI GAGCTC 2 cut(s) 961, 1336
Eco57I CTGAAG 6 cut(s) 432, 936, 1121, 1662, 1959, 2175
Eco81I CCTNAGG 1 cut(s) 597
Eco88I CYCGRG 2 cut(s) 1337, 1356
EcoICRI GAGCTC 2 cut(s) 961, 1336
EcoO109I RGGNCCY 1 cut(s) 1889
EcoRI GAATTC 2 cut(s) 1402, 1823
EcoRII CCWGG 2 cut(s) 192, 1978
EcoRV GATATC 1 cut(s) 1786
EcoT14I CCWWGG 2 cut(s) 1840, 2197
EcoT38I GRGCYC 6 cut(s) 27, 51, 595, 963, 1338, 1979
ErhI CCWWGG 2 cut(s) 1840, 2197
Esp3I CGTCTC 1 cut(s) 1426
FalI AAGNNNNNCTT 4 cut(s) 744, 776, 1841, 1873
FaqI GGGAC 2 cut(s) 58, 385
FauI CCCGC 2 cut(s) 34, 188
FbaI TGATCA 1 cut(s) 778
FblI GTMKAC 1 cut(s) 272
FokI GGATG 3 cut(s) 989, 2414, 2576
FriOI GRGCYC 6 cut(s) 27, 51, 595, 963, 1338, 1979
FspBI CTAG 7 cut(s) 1200, 1241, 1394, 1452, 1689, 1746, 1830
FspI TGCGCA 1 cut(s) 698
GlaI GCGC 2 cut(s) 56, 698
GsaI CCCAGC 2 cut(s) 121, 2173
HaeIII GGCC 3 cut(s) 49, 408, 2061
HgaI GACGC 2 cut(s) 142, 2324
HhaI GCGC 2 cut(s) 57, 699
Hin1I GRCGYC 2 cut(s) 9, 153
Hin6I GCGC 2 cut(s) 55, 697
HinP1I GCGC 2 cut(s) 55, 697
HincII GTYRAC 2 cut(s) 273, 1269
HindII GTYRAC 2 cut(s) 273, 1269
HindIII AAGCTT 2 cut(s) 945, 1133
HphI GGTGA 6 cut(s) 79, 151, 569, 1814, 2003, 2519
Hpy166II GTNNAC 5 cut(s) 87, 273, 1163, 1269, 1805
Hpy8I GTNNAC 5 cut(s) 87, 273, 1163, 1269, 1805
Hpy99I CGWCG 2 cut(s) 11, 14
HpyCH4III ACNGT 7 cut(s) 639, 972, 1524, 1545, 1781, 2388, 2474
HpyCH4IV ACGT 3 cut(s) 9, 374, 424
HpyF10VI GCNNNNNNNGC 9 cut(s) 46, 110, 195, 284, 335, 515, 953, 1700, 2156
HpySE526I ACGT 3 cut(s) 9, 374, 424
Hsp92I GRCGYC 2 cut(s) 9, 153
HspAI GCGC 2 cut(s) 55, 697
KpnI GGTACC 1 cut(s) 1672
Ksp22I TGATCA 1 cut(s) 778
Kzo9I GATC 8 cut(s) 778, 834, 988, 1024, 1417, 2210, 2260, 2542
LguI GCTCTTC 3 cut(s) 975, 996, 1254
LmnI GCTCC 4 cut(s) 34, 62, 598, 2374
Lsp1109I GCAGC 8 cut(s) 436, 1003, 1046, 1078, 1435, 2116, 2299, 2485
LweI GCATC 8 cut(s) 230, 316, 347, 733, 805, 1048, 1078, 1545
MaeI CTAG 7 cut(s) 1200, 1241, 1394, 1452, 1689, 1746, 1830
MaeII ACGT 3 cut(s) 9, 374, 424
MaeIII GTNAC 3 cut(s) 701, 1762, 1991
MalI GATC 8 cut(s) 780, 836, 990, 1026, 1419, 2212, 2262, 2544
MbiI CCGCTC 1 cut(s) 29
MboI GATC 8 cut(s) 778, 834, 988, 1024, 1417, 2210, 2260, 2542
MfeI CAATTG 1 cut(s) 684
MflI RGATCY 3 cut(s) 1024, 1417, 2210
MhlI GDGCHC 7 cut(s) 27, 51, 526, 595, 963, 1338, 1979
MlyI GAGTC 4 cut(s) 74, 278, 2441, 2516
MmeI TCCRAC 5 cut(s) 30, 198, 666, 954, 2578
MseI TTAA 5 cut(s) 813, 879, 1128, 2378, 2550
MslI CAYNNNNRTG 3 cut(s) 203, 732, 1779
MspA1I CMGCKG 1 cut(s) 518
MspR9I CCNGG 2 cut(s) 194, 1980
MunI CAATTG 1 cut(s) 684
MvaI CCWGG 2 cut(s) 194, 1980
MwoI GCNNNNNNNGC 9 cut(s) 46, 110, 195, 284, 335, 515, 953, 1700, 2156
NcoI CCATGG 2 cut(s) 1840, 2197
NdeII GATC 8 cut(s) 778, 834, 988, 1024, 1417, 2210, 2260, 2542
NlaIV GGNNCC 5 cut(s) 49, 260, 594, 603, 1670
NmuCI GTSAC 2 cut(s) 701, 1991
NsbI TGCGCA 1 cut(s) 698
NspI RCATGY 2 cut(s) 1928, 1961
NspV TTCGAA 1 cut(s) 625
PaeR7I CTCGAG 2 cut(s) 1337, 1356
PagI TCATGA 1 cut(s) 727
PasI CCCWGGG 1 cut(s) 193
PciSI GCTCTTC 3 cut(s) 975, 996, 1254
PcsI WCGNNNNNNNCGW 3 cut(s) 18, 141, 371
PfeI GAWTC 6 cut(s) 226, 755, 1142, 2326, 2510, 2591
PleI GAGTC 4 cut(s) 73, 277, 2441, 2516
PpsI GAGTC 4 cut(s) 73, 277, 2441, 2516
PpuMI RGGWCCY 1 cut(s) 1889
Psp124BI GAGCTC 2 cut(s) 963, 1338
Psp5II RGGWCCY 1 cut(s) 1889
Psp6I CCWGG 2 cut(s) 192, 1978
PspFI CCCAGC 2 cut(s) 117, 2169
PspGI CCWGG 2 cut(s) 192, 1978
PspN4I GGNNCC 5 cut(s) 49, 260, 594, 603, 1670
PspOMI GGGCCC 1 cut(s) 47
PspPI GGNCC 7 cut(s) 47, 48, 407, 602, 639, 1719, 1889
PspPPI RGGWCCY 1 cut(s) 1889
PstI CTGCAG 1 cut(s) 1021
PstNI CAGNNNCTG 2 cut(s) 899, 1892
PsuI RGATCY 3 cut(s) 1024, 1417, 2210
PvuII CAGCTG 1 cut(s) 518
RseI CAYNNNNRTG 3 cut(s) 203, 732, 1779
SacI GAGCTC 2 cut(s) 963, 1338
SalI GTCGAC 1 cut(s) 271
SapI GCTCTTC 3 cut(s) 975, 996, 1254
SaqAI TTAA 5 cut(s) 813, 879, 1128, 2378, 2550
Sau3AI GATC 8 cut(s) 778, 834, 988, 1024, 1417, 2210, 2260, 2542
Sau96I GGNCC 7 cut(s) 47, 48, 407, 602, 639, 1719, 1889
ScaI AGTACT 1 cut(s) 2293
SchI GAGTC 4 cut(s) 74, 278, 2441, 2516
ScrFI CCNGG 2 cut(s) 194, 1980
SduI GDGCHC 7 cut(s) 27, 51, 526, 595, 963, 1338, 1979
SfaNI GCATC 8 cut(s) 230, 316, 347, 733, 805, 1048, 1078, 1545
SfcI CTRYAG 1 cut(s) 1017
Sfr274I CTCGAG 2 cut(s) 1337, 1356
SfuI TTCGAA 1 cut(s) 625
SinI GGWCC 4 cut(s) 602, 639, 1719, 1889
SlaI CTCGAG 2 cut(s) 1337, 1356
SmiMI CAYNNNNRTG 3 cut(s) 203, 732, 1779
SmlI CTYRAG 6 cut(s) 350, 962, 1062, 1177, 1337, 1356
SmoI CTYRAG 6 cut(s) 350, 962, 1062, 1177, 1337, 1356
SpeI ACTAGT 1 cut(s) 1829
SsiI CCGC 9 cut(s) 27, 96, 99, 102, 162, 181, 256, 1352, 1712
SspI AATATT 2 cut(s) 1082, 2002
SspMI CTAG 7 cut(s) 1200, 1241, 1394, 1452, 1689, 1746, 1830
SstI GAGCTC 2 cut(s) 963, 1338
StyD4I CCNGG 2 cut(s) 192, 1978
StyI CCWWGG 2 cut(s) 1840, 2197
TaaI ACNGT 7 cut(s) 639, 972, 1524, 1545, 1781, 2388, 2474
TaiI ACGT 3 cut(s) 12, 377, 427
TaqI TCGA 7 cut(s) 272, 625, 870, 1282, 1338, 1357, 1553
TaqII GACCGA 1 cut(s) 2546
TatI WGTACW 6 cut(s) 512, 1039, 1519, 2065, 2291, 2465
TauI GCSGC 3 cut(s) 101, 104, 1355
TfiI GAWTC 6 cut(s) 226, 755, 1142, 2326, 2510, 2591
Tru1I TTAA 5 cut(s) 813, 879, 1128, 2378, 2550
Tru9I TTAA 5 cut(s) 813, 879, 1128, 2378, 2550
TseFI GTSAC 2 cut(s) 701, 1991
TseI GCWGC 8 cut(s) 449, 1016, 1034, 1091, 1448, 2104, 2312, 2498
Tsp45I GTSAC 2 cut(s) 701, 1991
TspGWI ACGGA 6 cut(s) 133, 662, 1985, 2286, 2338, 2584
VpaK11BI GGWCC 4 cut(s) 602, 639, 1719, 1889
XapI RAATTY 2 cut(s) 1402, 1823
XceI RCATGY 2 cut(s) 1928, 1961
XcmI CCANNNNNNNNNTGG 1 cut(s) 2204
XhoI CTCGAG 2 cut(s) 1337, 1356
XmiI GTMKAC 1 cut(s) 272
XspI CTAG 7 cut(s) 1200, 1241, 1394, 1452, 1689, 1746, 1830
ZraI GACGTC 1 cut(s) 10
ZrmI AGTACT 1 cut(s) 2293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.