RLG00000028451

Forkhead associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0005860
Physical Location & Seq
Forward (+)
22965738 .. 22971192
5455 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028451

Sequence Viewer

Length: 2517 bp
ATGTCCGACGTCGGCGAAAGCGACCCCGCTCCGCTAAAGCCCAATGGGCCTGTGCGCTCCGAGGAGTCCATGTCCCCCATGCAGTTCACCACCTCCGCCGCCGCCAAAATCGCCTCCCAGCCTCTCCCCTCCTACGACCCTTCCGTCTGGGGCGTCCTCACCGCCATCTCCTCCAACGCCCGCAAACGCCCCCAGGGCATAAATATGCTATTGACTTCCAATGAGCATCAAATTGGACGATGCGTAGCCGATAAGCGGTTCCAGATTGAGTCGACTGCCATTAGCGCAAATCACTGCAAGATATTTAGGAAGAAGGTTGATGAAGATGCCAAGTGTGCATCAGTCTTCCTCAAGGACACAAGCACGAATGGGACGTATCTCAACTGGGAGAAGCTCACAAAAGTTGGCCCTGAAGTTGAAGTACGTCATGGCGACATTATCTCGCTGGCTGCACCTCCTCAGCATGGTATTGCATTTGCATTTGTATTTAGAGAAGTTGTCTCCAATGCCAGTACAGCCGGTGCTTTTGCAAAGAGAAAAGCAGATGAGTTTGCTGGTGAGAACAAGAGACTGAAAGGTATTGGCATTGGGGCTCCTGAGGGTCCAATATCTCTTGATGATTTTCGAAGTCTTCAACGGTCCAACACGGAATTGAGGAAGCAATTAGAAAGTCAAGTCATTACAATTGATAGGTTGCGCAGTGACAATCGTTTGGCTGTTGAGCATCATGAAAATGAAAAAAGAGAACTGAAAGAATCAGTTGCAAAACCTTACCTTGATCAACTGAAAGAATTGCATCGTGTTGTGGAGGTTAATCAGAAGGAGGTGGTAGACATCAATAAGATATGTGCAGAACAAAGATATGCTCTCGAAGACCTTAATGAAAGGCTTACAGCTTCTGTGCAGTCATGCACTGAAGCAAATGAAATAATGAATACTCAGAAAGCTTCTCTGGCTGAGCTCAAGGCACAGTTGGATGAAGAGCGAGATCAGAGAAGAGAAGAGCGAGAAAAGGCTGCAGTAGATCTAAAAGCAGCAGTACATAAAGCTCAATCAGATGCTCAAGAGGAACTAAAACAATATTCTGTTGCTGCCACAAGACGAGAGAGAGAGCAACAAGAAGTAATTAACAAGCTTCAGGAATCAGAGAGAGAGACGTGTTTACTAATAGAGAACTTGAGAACAAAATTGGAAGACACTAGGCAAAAGTTGGTAGTCTCTGAAAATAAAAATCGCCAGCTAGACACCCAAGTTTGCGAAGAGCAGTCAACCTCTGATAGTCGAAAAAAGAGAGTGGAAGAACTTGAGCTTGAGATTAAAGGACTGAGGAAAGAGCTCGAGAGTGAAAAGGCGGCTCGAGAAGAAGCATGGGCTAAAGTTTCTGCCCTTGAACTAGAGATGAATTCTGCAATGCAAGATCTTGATTTTGAAAGACGAAAATTGAAGGCTGCTAGAGAAAGAATAATGCTTCGGGAGACACAACTAAGGGCATTTTATTCCACAACTGAGGAGATTTCTGTACTGTTTGCTAAACAGCAGGAACAGTTGAAATCGATGCAGAGGACACTGGAAGATGAGGAAAATTATGATAACACATCAGTTGATTTTGACCTCAATGTTGTTGCGGATACAACTGGAACTGAAGGCAGAGATGATAAAGTAATCAGGTACCGTAGAAACAACACTGCTAGGGCAGGGTCAGCAACAACACCGCAGAGGTCCAATGGAAATCAAATTGGAACATCTACTGAAGAAGTCAGTGTTACTGAGAAGCATGACTGTGATATCAGAAGCCAACAAGGACCTGTTATGGAGGGAGATGGCATTGGCACTGAGCATGTTCCTGAAACTGAAGGCATTGACACTGAGCATGTTCCTGAAACAGAGAGCCCTGGAATGAATGGTGACGAAAATATAGATTTGAACAAGATTGCCACTATGGAAGGGGATACAATGCAAATTGATGAGGAAGGCCATGTACAAGGAAATGATGAGAAAGTTCCAATGATTTTTCAGCAGCGTCACTCTCAATCAAACACAATCAGGACAGCAGACCTTATAGCTTCTGAAGCTATTGGTAGCTGGGCTTGTAGCACAGCCCCTTCTGTCCATGGAGAAAATGGATCTCCAAGAAGTAGAGACAACAGTGAGGAAGGTGCTGCTGCACCACACGATCCGATTGACAGGGTGGCTGAGAGCCAAAGTACTCCATCTTCTGAGACTGCTGCCACAAGGCGGAATCGTGAGCGTCAAGCACTGAGTGAAATGATTGGGATAGTTGCTCCTGACTTAAAAGAACAGTTCGGTAATGTGGATGATAGTTATGATAATGAGAGAAGAAAACAGGCTTCTACATCTGACTCAGATACCGAGAGTTGTACGAACAGTGAAGATAATAACAAAGTTGAAGCTGCCGAAGGTGATTCAATTTCAGACTCAGAGACTGAGGGTAGTGATCGGGTTGATAATGCAATGGACGAAGATGGTGTGGATACAGAAGAAGATTCCGTTGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FHA

Protein Analysis

839

Amino Acids

93.49

Weight (kDa)

4.84

Isoelectric Point (pI)

50.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FHA PF00498 78 - 149 5.9e-11 FHA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 143
AatII GACGTC 1 cut(s) 12
Acc16I TGCGCA 1 cut(s) 698
Acc65I GGTACC 1 cut(s) 1668
AccB1I GGYRCC 1 cut(s) 1668
AccBSI CCGCTC 1 cut(s) 29
AccI GTMKAC 2 cut(s) 272, 831
AclWI GGATC 2 cut(s) 2131, 2168
AcsI RAATTY 1 cut(s) 1402
AcuI CTGAAG 7 cut(s) 432, 936, 1121, 1662, 1770, 1872, 2088
AcyI GRCGYC 2 cut(s) 9, 153
AdeI CACNNNGTG 1 cut(s) 2261
AfaI GTAC 8 cut(s) 423, 514, 1041, 1521, 1670, 1980, 2206, 2380
AfiI CCNNNNNNNGG 3 cut(s) 255, 464, 2235
AflIII ACRYGT 1 cut(s) 1157
AgsI TTSAA 9 cut(s) 419, 635, 1391, 1430, 1444, 1549, 1924, 2408, 2427
AjiI CACGTC 1 cut(s) 1158
AjnI CCWGG 2 cut(s) 192, 1891
AjuI GAANNNNNNNTTGG 1 cut(s) 2493
Alw21I GWGCWC 2 cut(s) 963, 1338
Alw26I GTCTC 8 cut(s) 505, 562, 1148, 1222, 1469, 2133, 2213, 2435
AlwI GGATC 2 cut(s) 2131, 2168
AlwNI CAGNNNCTG 2 cut(s) 899, 2444
Ama87I CYCGRG 2 cut(s) 1337, 1356
AoxI GGCC 3 cut(s) 47, 406, 1972
ApoI RAATTY 1 cut(s) 1402
Asp718I GGTACC 1 cut(s) 1668
AspLEI GCGC 3 cut(s) 57, 287, 699
AspS9I GGNCC 6 cut(s) 47, 407, 602, 639, 1719, 1802
AsuHPI GGTGA 5 cut(s) 79, 151, 569, 1916, 2432
AsuII TTCGAA 1 cut(s) 625
AvaI CYCGRG 2 cut(s) 1337, 1356
AvaII GGWCC 4 cut(s) 602, 639, 1719, 1802
AxyI CCTNAGG 1 cut(s) 597
BanI GGYRCC 1 cut(s) 1668
BanII GRGCYC 4 cut(s) 595, 963, 1338, 1892
BarI GAAGNNNNNNTAC 6 cut(s) 405, 437, 1962, 1994, 2197, 2229
BbsI GAAGAC 4 cut(s) 337, 623, 879, 1200
Bbv12I GWGCWC 2 cut(s) 963, 1338
BbvCI CCTCAGC 1 cut(s) 459
BccI CCATC 4 cut(s) 173, 1814, 2218, 2477
BciT130I CCWGG 2 cut(s) 194, 1893
BciVI GTATCC 3 cut(s) 1621, 1942, 2485
BclI TGATCA 1 cut(s) 778
BcoDI GTCTC 8 cut(s) 505, 562, 1148, 1222, 1469, 2133, 2213, 2435
BfaI CTAG 5 cut(s) 1200, 1241, 1394, 1452, 1689
BfmI CTRYAG 1 cut(s) 1017
BfuI GTATCC 3 cut(s) 1621, 1942, 2485
BglI GCCNNNNNGGC 2 cut(s) 46, 195
BglII AGATCT 2 cut(s) 1024, 1417
BlpI GCTNAGC 1 cut(s) 957
BmcAI AGTACT 1 cut(s) 2206
Bme1390I CCNGG 2 cut(s) 194, 1893
Bme18I GGWCC 4 cut(s) 602, 639, 1719, 1802
BmeT110I CYCGRG 2 cut(s) 1337, 1356
BmgBI CACGTC 1 cut(s) 1158
BmgT120I GGNCC 6 cut(s) 47, 407, 602, 639, 1719, 1802
BmiI GGNNCC 4 cut(s) 260, 594, 603, 1670
BmrFI CCNGG 2 cut(s) 194, 1893
BmrI ACTGGG 1 cut(s) 394
BmsI GCATC 8 cut(s) 230, 235, 316, 347, 733, 805, 1048, 1545
BmuI ACTGGG 1 cut(s) 394
BpiI GAAGAC 4 cut(s) 337, 623, 879, 1200
Bpu10I CCTNAGC 1 cut(s) 459
Bpu1102I GCTNAGC 1 cut(s) 957
Bpu14I TTCGAA 1 cut(s) 625
BpuEI CTTGAG 6 cut(s) 335, 947, 1047, 1198, 1325, 1331
Bsa29I ATCGAT 1 cut(s) 1553
BsaHI GRCGYC 2 cut(s) 9, 153
BsaJI CCNNGG 5 cut(s) 60, 192, 193, 1891, 2110
BsaXI ACNNNNNCTCC 2 cut(s) 56, 86
Bsc4I CCNNNNNNNGG 3 cut(s) 255, 464, 2235
Bse118I RCCGGY 1 cut(s) 518
Bse1I ACTGG 4 cut(s) 389, 510, 1572, 1639
Bse21I CCTNAGG 1 cut(s) 597
Bse3DI GCAATG 2 cut(s) 1416, 2478
BseBI CCWGG 2 cut(s) 194, 1893
BseCI ATCGAT 1 cut(s) 1553
BseDI CCNNGG 5 cut(s) 60, 192, 193, 1891, 2110
BseGI GGATG 2 cut(s) 982, 2320
BseLI CCNNNNNNNGG 3 cut(s) 255, 464, 2235
BseMI GCAATG 2 cut(s) 1416, 2478
BseNI ACTGG 4 cut(s) 389, 510, 1572, 1639
BseRI GAGGAG 4 cut(s) 77, 160, 447, 1523
BseYI CCCAGC 2 cut(s) 117, 2082
BsgI GTGCAG 4 cut(s) 435, 870, 923, 2148
BshFI GGCC 3 cut(s) 49, 408, 1974
BshNI GGYRCC 1 cut(s) 1668
BshVI ATCGAT 1 cut(s) 1553
BsiHKAI GWGCWC 2 cut(s) 963, 1338
BsiHKCI CYCGRG 2 cut(s) 1337, 1356
BsiSI CCGG 1 cut(s) 519
BslFI GGGAC 2 cut(s) 58, 385
BslI CCNNNNNNNGG 3 cut(s) 255, 464, 2235
BsmAI GTCTC 8 cut(s) 505, 562, 1148, 1222, 1469, 2133, 2213, 2435
BsmBI CGTCTC 1 cut(s) 1148
BsmFI GGGAC 2 cut(s) 58, 385
BsnI GGCC 3 cut(s) 49, 408, 1974
BsoBI CYCGRG 2 cut(s) 1337, 1356
Bsp119I TTCGAA 1 cut(s) 625
Bsp1286I GDGCHC 4 cut(s) 595, 963, 1338, 1892
Bsp1407I TGTACA 1 cut(s) 1978
Bsp143I GATC 7 cut(s) 778, 988, 1024, 1417, 2123, 2173, 2455
Bsp1720I GCTNAGC 1 cut(s) 957
Bsp19I CCATGG 1 cut(s) 2110
BspANI GGCC 3 cut(s) 49, 408, 1974
BspDI ATCGAT 1 cut(s) 1553
BspHI TCATGA 1 cut(s) 727
BspLI GGNNCC 4 cut(s) 260, 594, 603, 1670
BspMAI CTGCAG 1 cut(s) 1021
BspPI GGATC 2 cut(s) 2131, 2168
BspQI GCTCTTC 3 cut(s) 975, 996, 1254
BspT104I TTCGAA 1 cut(s) 625
BspT107I GGYRCC 1 cut(s) 1668
BsrBI CCGCTC 1 cut(s) 29
BsrDI GCAATG 2 cut(s) 1416, 2478
BsrFI RCCGGY 1 cut(s) 518
BsrGI TGTACA 1 cut(s) 1978
BsrI ACTGG 4 cut(s) 389, 510, 1572, 1639
BssAI RCCGGY 1 cut(s) 518
BssECI CCNNGG 5 cut(s) 60, 192, 193, 1891, 2110
BssMI GATC 7 cut(s) 778, 988, 1024, 1417, 2123, 2173, 2455
BssNI GRCGYC 2 cut(s) 9, 153
BssT1I CCWWGG 1 cut(s) 2110
Bst2UI CCWGG 2 cut(s) 194, 1893
Bst4CI ACNGT 9 cut(s) 639, 972, 1524, 1545, 1673, 1781, 2147, 2301, 2387
Bst6I CTCTTC 4 cut(s) 975, 991, 996, 1254
BstACI GRCGYC 2 cut(s) 9, 153
BstAUI TGTACA 1 cut(s) 1978
BstBI TTCGAA 1 cut(s) 625
BstC8I GCNNGC 3 cut(s) 181, 447, 1238
BstDSI CCRYGG 1 cut(s) 2110
BstF5I GGATG 2 cut(s) 982, 2320
BstHHI GCGC 3 cut(s) 57, 287, 699
BstKTI GATC 7 cut(s) 781, 991, 1027, 1420, 2126, 2176, 2458
BstMAI GTCTC 8 cut(s) 505, 562, 1148, 1222, 1469, 2133, 2213, 2435
BstMBI GATC 7 cut(s) 778, 988, 1024, 1417, 2123, 2173, 2455
BstMWI GCNNNNNNNGC 9 cut(s) 46, 110, 195, 284, 335, 515, 953, 1700, 2069
BstNI CCWGG 2 cut(s) 194, 1893
BstNSI RCATGY 2 cut(s) 1841, 1874
BstSCI CCNGG 2 cut(s) 192, 1891
BstSFI CTRYAG 1 cut(s) 1017
BstV2I GAAGAC 4 cut(s) 337, 623, 879, 1200
BstX2I RGATCY 3 cut(s) 1024, 1417, 2123
BstYI RGATCY 3 cut(s) 1024, 1417, 2123
Bsu15I ATCGAT 1 cut(s) 1553
Bsu36I CCTNAGG 1 cut(s) 597
BsuI GTATCC 3 cut(s) 1621, 1942, 2485
BsuRI GGCC 3 cut(s) 49, 408, 1974
BsuTUI ATCGAT 1 cut(s) 1553
BtgI CCRYGG 1 cut(s) 2110
BtrI CACGTC 1 cut(s) 1158
BtsCI GGATG 2 cut(s) 982, 2320
BtsI GCAGTG 3 cut(s) 292, 706, 1683
Cac8I GCNNGC 3 cut(s) 181, 447, 1238
CaiI CAGNNNCTG 2 cut(s) 899, 2444
CciI TCATGA 1 cut(s) 727
CfoI GCGC 3 cut(s) 57, 287, 699
Cfr10I RCCGGY 1 cut(s) 518
Cfr13I GGNCC 6 cut(s) 47, 407, 602, 639, 1719, 1802
ClaI ATCGAT 1 cut(s) 1553
CseI GACGC 3 cut(s) 142, 2009, 2237
Csp6I GTAC 8 cut(s) 422, 513, 1040, 1520, 1669, 1979, 2205, 2379
CviQI GTAC 8 cut(s) 422, 513, 1040, 1520, 1669, 1979, 2205, 2379
DpnI GATC 7 cut(s) 780, 990, 1026, 1419, 2125, 2175, 2457
DpnII GATC 7 cut(s) 778, 988, 1024, 1417, 2123, 2173, 2455
DraIII CACNNNGTG 1 cut(s) 2261
DrdI GACNNNNNNGTC 1 cut(s) 143
DseDI GACNNNNNNGTC 1 cut(s) 143
Eam1104I CTCTTC 4 cut(s) 975, 991, 996, 1254
EarI CTCTTC 4 cut(s) 975, 991, 996, 1254
EciI GGCGGA 2 cut(s) 85, 2251
Ecl136II GAGCTC 2 cut(s) 961, 1336
Eco130I CCWWGG 1 cut(s) 2110
Eco24I GRGCYC 4 cut(s) 595, 963, 1338, 1892
Eco32I GATATC 1 cut(s) 1786
Eco47I GGWCC 4 cut(s) 602, 639, 1719, 1802
Eco53kI GAGCTC 2 cut(s) 961, 1336
Eco57I CTGAAG 7 cut(s) 432, 936, 1121, 1662, 1770, 1872, 2088
Eco81I CCTNAGG 1 cut(s) 597
Eco88I CYCGRG 2 cut(s) 1337, 1356
EcoICRI GAGCTC 2 cut(s) 961, 1336
EcoO109I RGGNCCY 1 cut(s) 1802
EcoRI GAATTC 1 cut(s) 1402
EcoRII CCWGG 2 cut(s) 192, 1891
EcoRV GATATC 1 cut(s) 1786
EcoT14I CCWWGG 1 cut(s) 2110
EcoT38I GRGCYC 4 cut(s) 595, 963, 1338, 1892
ErhI CCWWGG 1 cut(s) 2110
Esp3I CGTCTC 1 cut(s) 1148
FaqI GGGAC 2 cut(s) 58, 385
FauI CCCGC 2 cut(s) 34, 188
FbaI TGATCA 1 cut(s) 778
FblI GTMKAC 2 cut(s) 272, 831
FokI GGATG 2 cut(s) 989, 2327
FriOI GRGCYC 4 cut(s) 595, 963, 1338, 1892
FspBI CTAG 5 cut(s) 1200, 1241, 1394, 1452, 1689
FspI TGCGCA 1 cut(s) 698
GlaI GCGC 3 cut(s) 56, 286, 698
GsaI CCCAGC 2 cut(s) 121, 2086
HaeIII GGCC 3 cut(s) 49, 408, 1974
HapII CCGG 1 cut(s) 519
HgaI GACGC 3 cut(s) 142, 2009, 2237
HhaI GCGC 3 cut(s) 57, 287, 699
Hin1I GRCGYC 2 cut(s) 9, 153
Hin6I GCGC 3 cut(s) 55, 285, 697
HinP1I GCGC 3 cut(s) 55, 285, 697
HincII GTYRAC 2 cut(s) 273, 1269
HindII GTYRAC 2 cut(s) 273, 1269
HindIII AAGCTT 2 cut(s) 945, 1133
HinfI GANTC 9 cut(s) 65, 269, 755, 1142, 2239, 2360, 2423, 2435, 2504
HpaII CCGG 1 cut(s) 519
HphI GGTGA 5 cut(s) 79, 151, 569, 1916, 2432
Hpy166II GTNNAC 5 cut(s) 87, 273, 832, 1163, 1269
Hpy8I GTNNAC 5 cut(s) 87, 273, 832, 1163, 1269
Hpy99I CGWCG 2 cut(s) 11, 14
HpyCH4III ACNGT 9 cut(s) 639, 972, 1524, 1545, 1673, 1781, 2147, 2301, 2387
HpyCH4IV ACGT 4 cut(s) 9, 374, 424, 1157
HpyF10VI GCNNNNNNNGC 9 cut(s) 46, 110, 195, 284, 335, 515, 953, 1700, 2069
HpySE526I ACGT 4 cut(s) 9, 374, 424, 1157
Hsp92I GRCGYC 2 cut(s) 9, 153
HspAI GCGC 3 cut(s) 55, 285, 697
KpnI GGTACC 1 cut(s) 1672
Ksp22I TGATCA 1 cut(s) 778
Kzo9I GATC 7 cut(s) 778, 988, 1024, 1417, 2123, 2173, 2455
LguI GCTCTTC 3 cut(s) 975, 996, 1254
LmnI GCTCC 4 cut(s) 34, 62, 598, 2287
LweI GCATC 8 cut(s) 230, 235, 316, 347, 733, 805, 1048, 1545
MaeI CTAG 5 cut(s) 1200, 1241, 1394, 1452, 1689
MaeII ACGT 4 cut(s) 9, 374, 424, 1157
MaeIII GTNAC 4 cut(s) 701, 1762, 1904, 2021
MalI GATC 7 cut(s) 780, 990, 1026, 1419, 2125, 2175, 2457
MbiI CCGCTC 1 cut(s) 29
MboI GATC 7 cut(s) 778, 988, 1024, 1417, 2123, 2173, 2455
MfeI CAATTG 1 cut(s) 684
MflI RGATCY 3 cut(s) 1024, 1417, 2123
MhlI GDGCHC 4 cut(s) 595, 963, 1338, 1892
MlyI GAGTC 4 cut(s) 74, 278, 2354, 2429
MmeI TCCRAC 5 cut(s) 30, 198, 666, 954, 2491
MseI TTAA 5 cut(s) 813, 879, 1128, 1317, 2291
MslI CAYNNNNRTG 3 cut(s) 203, 732, 1779
MspI CCGG 1 cut(s) 519
MspR9I CCNGG 2 cut(s) 194, 1893
MunI CAATTG 1 cut(s) 684
MvaI CCWGG 2 cut(s) 194, 1893
MwoI GCNNNNNNNGC 9 cut(s) 46, 110, 195, 284, 335, 515, 953, 1700, 2069
NcoI CCATGG 1 cut(s) 2110
NdeII GATC 7 cut(s) 778, 988, 1024, 1417, 2123, 2173, 2455
NlaIV GGNNCC 4 cut(s) 260, 594, 603, 1670
NmuCI GTSAC 3 cut(s) 701, 1904, 2021
NsbI TGCGCA 1 cut(s) 698
NspI RCATGY 2 cut(s) 1841, 1874
NspV TTCGAA 1 cut(s) 625
PaeR7I CTCGAG 2 cut(s) 1337, 1356
PagI TCATGA 1 cut(s) 727
PasI CCCWGGG 1 cut(s) 193
PciSI GCTCTTC 3 cut(s) 975, 996, 1254
PcsI WCGNNNNNNNCGW 3 cut(s) 18, 141, 371
PfeI GAWTC 5 cut(s) 755, 1142, 2239, 2423, 2504
PleI GAGTC 4 cut(s) 73, 277, 2354, 2429
PpsI GAGTC 4 cut(s) 73, 277, 2354, 2429
PpuMI RGGWCCY 1 cut(s) 1802
Psp124BI GAGCTC 2 cut(s) 963, 1338
Psp5II RGGWCCY 1 cut(s) 1802
Psp6I CCWGG 2 cut(s) 192, 1891
PspFI CCCAGC 2 cut(s) 117, 2082
PspGI CCWGG 2 cut(s) 192, 1891
PspN4I GGNNCC 4 cut(s) 260, 594, 603, 1670
PspPI GGNCC 6 cut(s) 47, 407, 602, 639, 1719, 1802
PspPPI RGGWCCY 1 cut(s) 1802
PstI CTGCAG 1 cut(s) 1021
PstNI CAGNNNCTG 2 cut(s) 899, 2444
PsuI RGATCY 3 cut(s) 1024, 1417, 2123
RsaI GTAC 8 cut(s) 423, 514, 1041, 1521, 1670, 1980, 2206, 2380
RsaNI GTAC 8 cut(s) 422, 513, 1040, 1520, 1669, 1979, 2205, 2379
RseI CAYNNNNRTG 3 cut(s) 203, 732, 1779
SacI GAGCTC 2 cut(s) 963, 1338
SalI GTCGAC 1 cut(s) 271
SapI GCTCTTC 3 cut(s) 975, 996, 1254
SaqAI TTAA 5 cut(s) 813, 879, 1128, 1317, 2291
Sau3AI GATC 7 cut(s) 778, 988, 1024, 1417, 2123, 2173, 2455
Sau96I GGNCC 6 cut(s) 47, 407, 602, 639, 1719, 1802
ScaI AGTACT 1 cut(s) 2206
SchI GAGTC 4 cut(s) 74, 278, 2354, 2429
ScrFI CCNGG 2 cut(s) 194, 1893
SduI GDGCHC 4 cut(s) 595, 963, 1338, 1892
SfaNI GCATC 8 cut(s) 230, 235, 316, 347, 733, 805, 1048, 1545
SfcI CTRYAG 1 cut(s) 1017
Sfr274I CTCGAG 2 cut(s) 1337, 1356
SfuI TTCGAA 1 cut(s) 625
SinI GGWCC 4 cut(s) 602, 639, 1719, 1802
SlaI CTCGAG 2 cut(s) 1337, 1356
SmiMI CAYNNNNRTG 3 cut(s) 203, 732, 1779
SmlI CTYRAG 8 cut(s) 350, 962, 1062, 1177, 1304, 1310, 1337, 1356
SmoI CTYRAG 8 cut(s) 350, 962, 1062, 1177, 1304, 1310, 1337, 1356
SspI AATATT 1 cut(s) 1082
SspMI CTAG 5 cut(s) 1200, 1241, 1394, 1452, 1689
SstI GAGCTC 2 cut(s) 963, 1338
StyD4I CCNGG 2 cut(s) 192, 1891
StyI CCWWGG 1 cut(s) 2110
TaaI ACNGT 9 cut(s) 639, 972, 1524, 1545, 1673, 1781, 2147, 2301, 2387
TaiI ACGT 4 cut(s) 12, 377, 427, 1160
TaqI TCGA 7 cut(s) 272, 625, 870, 1282, 1338, 1357, 1553
TatI WGTACW 5 cut(s) 512, 1039, 1519, 1978, 2204
TauI GCSGC 3 cut(s) 101, 104, 1355
TfiI GAWTC 5 cut(s) 755, 1142, 2239, 2423, 2504
Tru1I TTAA 5 cut(s) 813, 879, 1128, 1317, 2291
Tru9I TTAA 5 cut(s) 813, 879, 1128, 1317, 2291
TseFI GTSAC 3 cut(s) 701, 1904, 2021
Tsp45I GTSAC 3 cut(s) 701, 1904, 2021
TspDTI ATGAA 9 cut(s) 336, 744, 750, 897, 939, 947, 993, 1415, 1913
TspGWI ACGGA 3 cut(s) 133, 662, 2497
VpaK11BI GGWCC 4 cut(s) 602, 639, 1719, 1802
XapI RAATTY 1 cut(s) 1402
XceI RCATGY 2 cut(s) 1841, 1874
XcmI CCANNNNNNNNNTGG 1 cut(s) 2117
XhoI CTCGAG 2 cut(s) 1337, 1356
XmiI GTMKAC 2 cut(s) 272, 831
XspI CTAG 5 cut(s) 1200, 1241, 1394, 1452, 1689
ZraI GACGTC 1 cut(s) 10
ZrmI AGTACT 1 cut(s) 2206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.