MD02G1201400.v1.1

Forkhead associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0005860
Physical Location & Seq
Forward (+)
19903451 .. 19909679
6229 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1201400.v1.1.491

Sequence Viewer

Length: 2703 bp
ATGTCTGCCGTAGGCGAAAGCGAGGTCTCCTCCAAACCCACTCCAGTCAAACCCAATGTCGCTGCGGCCACCACACCTCCACAAGCCTCCCAGTGCACCCGCCAGTTCATCACCTCCGTCGCCTCCAAGATCGCCTCCCAGCCCCTCCAGAATTACGACCCTGGCGTCTGGGGCGTCCTCACCGCCATTTCCACCCAGGCCCGCAAACGCAACCAGGGCATAAACATCCTGTTGACTGCGGATGAGCATTGGATTGGTCGAACCGTGGACGATGTACGTTTCCAGATTGATTCGACTGCGGTTAGTGGAAGGCATTGCAAGATATACAGGAAGAGGGCTGCTAATGAAGATACGAAGCATACATCCGTATGCTTGAAGGACATGAGCACAAATGGGACTTATCTTAACTGGATGAAGTTGACAAAAGTTGGCGCTGAAGCTGAAGTACGTCATGGAGATATTATATCACCTTCAGCACCTCCTCAGCATGATCTTGCATATGCATTCGTATACAGAGATGTTTCACTGTCCAGTCCCAGTACAGATGGTGCATTTGCAAAAAGAAAAGCAGAGGATTTTGTCACTGATAATAAGAGAGTTAAAGGGATTGGCATTGGTTCTTCTGATGGTCCTATATCTCTTGATGACTTTCGAAGTCTTCAACGGTCAAACACGGAATTGAGGAAGCAATTAGAAAACCAAGTTGTTACAATTGATACACTGCGCAATGAGACTCGTCTGGCTGTTGAGTGTCATGAAAACGAAAAGAAAGAACTGAGAGAATTGGTGGCAAGACCTTACCTTGATCAACTCAGTGAGTTGCAACGTGGTCTGGAGATTAAACAGAAGGAGCTGGCGGAAGCTAATAGAATATATGCAGAAACAAAGCATGCTATCGAAGACCTTAATGAAAGGCTTGGTGCTTCTGTGCAGTCATGTTCTGAAGCAAATGAAATTGTGAATAGTCAGAAAGCATCTATAGCTGAACTCAAGGCACAGTTGGATGAAGAGCGTGCTCAGAGACAAGAAGAACGAGAAAAGGCTGCAGCAGATTTGAAAGCAGCAGTGCAGAAAGCTCAATCAGAGGCTGAAGAGGATTTAAAACGAATTTCTGATGATGCCACAAGACGACAAAGAGAGCAACAAGAAGTAATTAATAAGCTTCAGGAATCAGAGAAAGAAACATGTTTGTTAGTGGAAACCTTGAGAACCAAATTGGAAGACACTAGGCAAAAGTTGGTAGTCTCTGACTATAAAGTTCGCCAGCTAGAAACCCAACTTTCCGAAGAGGAGTCAACCTCTGAAAGTCGAAAAATTAGAGTTGAAGAACTTGAACATGAGATGAGAGGACTGAGGAAGGAGCTTGAGAGTGAAAAGGCAGCTCGAGAAGAAGCATGGGCTAAAGTTTCTGCACTTGAACTAGAGATAAATGCTGCTATGCGAGATCTTGATTTTGAGAGACGAAGGCTAAAAGCTGCCAGAGAAAGAATTATGCTTAGGGAGACACAACTAAGAGCATTTTATTCCACAACCGAGGAGATTTCTGTACTGTTTACTAAACAGCAGGAACAGTTGAAATCAATGCAGAAGACGCTGGAGGACGAGGAAAATTATGACAACACATCAGCAGATATTGACCTCAATGTGGTTATTGATGACGTAACTGCACCTGAAGGCAGAGGAAATGAAGCAATCAGATACCATAGTAACATTACTGCCAAGGCAGGGTCAGCTACAACATCCCAGAGGTCTTTCAGAAATCAAGTTGTAACTTCTAGTGATGAAATTAGTGTGACCGAGAAACATGACTGTGATATCAGAAGCCAAGAAGGTCAACATACCGAAGAGGCAGAATTTACAAGTGCAGACCTTGGTGTCAAGGGTGCCTTTGGTTCTGAAATTGATGGTGTTGGCACAGCACCCATTATGGAGGGAGACGGCATTGACACCGAGCATGTTCCTGAAACTGAAAGCCTTGGAATCAATGGCGAGCAGAATATTGATTTGAATAGAATTGTCACTTTAGAAGGGGATACAATGCAACTTGATGATGAAACCAACGTACAAGAAAATGATGAGCAGGTTCCAATGATTTGTCAGCAGCGTCACTCACAATCAAATAGCCCCCAAGACACTCTCAAAGGTATGGAAGATACCGAAGCCTGTGGTACGATCAGGACAGCAGACCTTTTAGCTTCTGAAGTTATTGGTAGCTGGGCTTACAGCACAGCCCCTTCTGTGCATGGAGATAATGGCTCTCAAAGAAGCAGAGACAACAATGAGGAAGGTGCTGCTGCACCACACAACTCCACCGATCAGGTGGCCGAGAGCCAAAGTACTCCATCTTCTGATGCTGTTGCCAGAAGACGAAATCTTGAATGTCAAGCACCCAATTCCTCTTCACCCGGATTCCAAATTAGTAAACATGCCCTAAGTGAAATGATTGGGATTGTTGCTCCGGACTTAAAAGAACAGTTCGGTGGTATTGTAGATGATAGTTGTGATCATGCGAAAGAAAAACAAGGTTCTGCATCCGACTCAGATACTGAGAGCTGTTCAAACAATGAAGAAGATAACAGAACTGATGCCAAAAGCGGATCAATTTCAGATTCAGAAACCGAGGGCAGTGATCGGGGTGATGAAGATAAAAAATCTGGTGATGCAATGGATGAAGATGATCAAGATACAGAAGATTCTCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FHA

Protein Analysis

901

Amino Acids

99.77

Weight (kDa)

4.75

Isoelectric Point (pI)

52.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FHA PF00498 84 - 155 9.1e-11 FHA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 164, 1874
Acc16I TGCGCA 1 cut(s) 725
Acc36I ACCTGC 1 cut(s) 2071
AccB1I GGYRCC 1 cut(s) 1883
AccI GTMKAC 1 cut(s) 510
AccIII TCCGGA 1 cut(s) 2458
AciI CCGC 8 cut(s) 65, 100, 183, 202, 239, 299, 857, 2595
AclWI GGATC 1 cut(s) 2605
AcoI YGGCCR 2 cut(s) 66, 2322
AcsI RAATTY 2 cut(s) 1107, 1853
AcuI CTGAAG 8 cut(s) 456, 456, 462, 963, 1110, 1148, 1692, 2220
AcyI GRCGYC 2 cut(s) 165, 174
AfaI GTAC 7 cut(s) 276, 447, 541, 1548, 2064, 2170, 2338
AfiI CCNNNNNNNGG 2 cut(s) 1645, 1725
AflIII ACRYGT 1 cut(s) 1184
AjnI CCWGG 3 cut(s) 160, 195, 213
Alw21I GWGCWC 3 cut(s) 98, 389, 1018
Alw26I GTCTC 8 cut(s) 31, 725, 1015, 1249, 1453, 1496, 1929, 2265
Alw44I GTGCAC 1 cut(s) 94
AlwI GGATC 1 cut(s) 2605
AlwNI CAGNNNCTG 2 cut(s) 1088, 2546
Ama87I CYCGRG 1 cut(s) 1383
Aor13HI TCCGGA 1 cut(s) 2458
AoxI GGCC 3 cut(s) 66, 198, 2322
ApaLI GTGCAC 1 cut(s) 94
ApoI RAATTY 2 cut(s) 1107, 1853
ArsI GACNNNNNNTTYG 4 cut(s) 9, 41, 42, 74
AseI ATTAAT 1 cut(s) 1155
AspLEI GCGC 2 cut(s) 434, 726
AspS9I GGNCC 2 cut(s) 199, 629
AsuC2I CCSGG 1 cut(s) 2406
AsuHPI GGTGA 6 cut(s) 103, 172, 459, 2394, 2648, 2669
AsuII TTCGAA 1 cut(s) 652
AvaI CYCGRG 1 cut(s) 1383
AvaII GGWCC 1 cut(s) 629
BaeGI GKGCMC 1 cut(s) 98
BaeI ACNNNNGTAYC 2 cut(s) 1690, 1723
BanI GGYRCC 1 cut(s) 1883
BarI GAAGNNNNNNTAC 4 cut(s) 429, 461, 2329, 2361
BbsI GAAGAC 5 cut(s) 650, 906, 1227, 1595, 2371
Bbv12I GWGCWC 3 cut(s) 98, 389, 1018
BbvCI CCTCAGC 1 cut(s) 483
BccI CCATC 4 cut(s) 539, 620, 1898, 2350
BceAI ACGGC 1 cut(s) 1954
BciT130I CCWGG 3 cut(s) 162, 197, 215
BciVI GTATCC 1 cut(s) 2026
BclI TGATCA 3 cut(s) 805, 2503, 2677
BcnI CCSGG 1 cut(s) 2406
BcoDI GTCTC 8 cut(s) 31, 725, 1015, 1249, 1453, 1496, 1929, 2265
BfaI CTAG 4 cut(s) 1227, 1268, 1421, 1776
BfmI CTRYAG 2 cut(s) 978, 1044
BfoI RGCGCY 1 cut(s) 435
BfuAI ACCTGC 1 cut(s) 2071
BfuI GTATCC 1 cut(s) 2026
BglII AGATCT 1 cut(s) 1444
BmcAI AGTACT 1 cut(s) 2338
Bme1390I CCNGG 4 cut(s) 162, 197, 215, 2406
Bme18I GGWCC 1 cut(s) 629
BmeT110I CYCGRG 1 cut(s) 1383
BmgT120I GGNCC 2 cut(s) 199, 629
BmiI GGNNCC 2 cut(s) 1885, 2085
BmrFI CCNGG 4 cut(s) 162, 197, 215, 2406
BmrI ACTGGG 2 cut(s) 85, 531
BmsI GCATC 6 cut(s) 983, 1108, 2341, 2540, 2575, 2650
BmuI ACTGGG 2 cut(s) 85, 531
BpiI GAAGAC 5 cut(s) 650, 906, 1227, 1595, 2371
BplI GAGNNNNNCTC 4 cut(s) 14, 46, 1283, 1315
BpmI CTGGAG 4 cut(s) 27, 131, 854, 1616
Bpu10I CCTNAGC 2 cut(s) 483, 1496
Bpu14I TTCGAA 1 cut(s) 652
BpuEI CTTGAG 3 cut(s) 974, 1225, 1385
BpuMI CCSGG 1 cut(s) 2406
BsaHI GRCGYC 2 cut(s) 165, 174
BsaI GGTCTC 1 cut(s) 31
BsaJI CCNNGG 9 cut(s) 160, 195, 214, 264, 1533, 1719, 1870, 1975, 2619
BsaWI WCCGGW 1 cut(s) 2458
BsaXI ACNNNNNCTCC 2 cut(s) 61, 91
Bsc4I CCNNNNNNNGG 2 cut(s) 1645, 1725
Bse1I ACTGG 6 cut(s) 44, 91, 103, 413, 531, 537
Bse3DI GCAATG 3 cut(s) 313, 733, 2670
BseAI TCCGGA 1 cut(s) 2458
BseBI CCWGG 3 cut(s) 162, 197, 215
BseDI CCNNGG 9 cut(s) 160, 195, 214, 264, 1533, 1719, 1870, 1975, 2619
BseGI GGATG 8 cut(s) 225, 247, 362, 417, 1009, 1739, 2531, 2674
BseLI CCNNNNNNNGG 2 cut(s) 1645, 1725
BseMI GCAATG 3 cut(s) 313, 733, 2670
BseMII CTCAG 7 cut(s) 497, 767, 826, 1031, 1343, 2538, 2553
BseNI ACTGG 6 cut(s) 44, 91, 103, 413, 531, 537
BseRI GAGGAG 4 cut(s) 19, 471, 1304, 1550
BseSI GKGCMC 1 cut(s) 98
BseYI CCCAGC 2 cut(s) 138, 2214
BsgI GTGCAG 6 cut(s) 950, 1088, 1395, 1650, 1884, 2280
BshFI GGCC 3 cut(s) 68, 200, 2324
BshNI GGYRCC 1 cut(s) 1883
BsiHKAI GWGCWC 3 cut(s) 98, 389, 1018
BsiHKCI CYCGRG 1 cut(s) 1383
BsiSI CCGG 2 cut(s) 2406, 2459
BslFI GGGAC 2 cut(s) 409, 519
BslI CCNNNNNNNGG 2 cut(s) 1645, 1725
BsmAI GTCTC 8 cut(s) 31, 725, 1015, 1249, 1453, 1496, 1929, 2265
BsmBI CGTCTC 2 cut(s) 1453, 1929
BsmFI GGGAC 2 cut(s) 409, 519
BsmI GAATGC 1 cut(s) 503
BsnI GGCC 3 cut(s) 68, 200, 2324
Bso31I GGTCTC 1 cut(s) 31
BsoBI CYCGRG 1 cut(s) 1383
Bsp119I TTCGAA 1 cut(s) 652
Bsp1286I GDGCHC 3 cut(s) 98, 389, 1018
Bsp13I TCCGGA 1 cut(s) 2458
BspACI CCGC 8 cut(s) 65, 100, 183, 202, 239, 299, 857, 2595
BspANI GGCC 3 cut(s) 68, 200, 2324
BspCNI CTCAG 7 cut(s) 496, 768, 825, 1030, 1344, 2539, 2552
BspEI TCCGGA 1 cut(s) 2458
BspHI TCATGA 1 cut(s) 754
BspLI GGNNCC 2 cut(s) 1885, 2085
BspMAI CTGCAG 1 cut(s) 1048
BspMI ACCTGC 1 cut(s) 2071
BspPI GGATC 1 cut(s) 2605
BspQI GCTCTTC 1 cut(s) 1002
BspT104I TTCGAA 1 cut(s) 652
BspT107I GGYRCC 1 cut(s) 1883
BspTNI GGTCTC 1 cut(s) 31
BsrDI GCAATG 3 cut(s) 313, 733, 2670
BsrI ACTGG 6 cut(s) 44, 91, 103, 413, 531, 537
BssECI CCNNGG 9 cut(s) 160, 195, 214, 264, 1533, 1719, 1870, 1975, 2619
BssNAI GTATAC 1 cut(s) 511
BssNI GRCGYC 2 cut(s) 165, 174
BssT1I CCWWGG 3 cut(s) 1719, 1870, 1975
Bst1107I GTATAC 1 cut(s) 511
Bst2UI CCWGG 3 cut(s) 162, 197, 215
Bst4CI ACNGT 8 cut(s) 265, 528, 666, 999, 1551, 1572, 1811, 2475
Bst6I CTCTTC 6 cut(s) 326, 1002, 1086, 1281, 1839, 2404
BstACI GRCGYC 2 cut(s) 165, 174
BstBI TTCGAA 1 cut(s) 652
BstC8I GCNNGC 6 cut(s) 202, 855, 891, 1014, 1265, 1991
BstDSI CCRYGG 1 cut(s) 264
BstF5I GGATG 8 cut(s) 225, 247, 362, 417, 1009, 1739, 2531, 2674
BstH2I RGCGCY 1 cut(s) 435
BstHHI GCGC 2 cut(s) 434, 726
BstMAI GTCTC 8 cut(s) 31, 725, 1015, 1249, 1453, 1496, 1929, 2265
BstMWI GCNNNNNNNGC 5 cut(s) 171, 216, 980, 1591, 1730
BstNI CCWGG 3 cut(s) 162, 197, 215
BstNSI RCATGY 4 cut(s) 893, 1188, 1958, 2429
BstSCI CCNGG 4 cut(s) 160, 195, 213, 2404
BstSFI CTRYAG 2 cut(s) 978, 1044
BstSLI GKGCMC 1 cut(s) 98
BstV2I GAAGAC 5 cut(s) 650, 906, 1227, 1595, 2371
BstX2I RGATCY 1 cut(s) 1444
BstYI RGATCY 1 cut(s) 1444
BstZ17I GTATAC 1 cut(s) 511
BsuI GTATCC 1 cut(s) 2026
BsuRI GGCC 3 cut(s) 68, 200, 2324
BtgI CCRYGG 1 cut(s) 264
BtsCI GGATG 8 cut(s) 225, 247, 362, 417, 1009, 1739, 2531, 2674
BtsI GCAGTG 3 cut(s) 719, 1071, 2632
BtsIMutI CAGTG 7 cut(s) 98, 524, 582, 719, 820, 1071, 2632
BveI ACCTGC 1 cut(s) 2071
Cac8I GCNNGC 6 cut(s) 202, 855, 891, 1014, 1265, 1991
CaiI CAGNNNCTG 2 cut(s) 1088, 2546
CciI TCATGA 1 cut(s) 754
CfoI GCGC 2 cut(s) 434, 726
Cfr13I GGNCC 2 cut(s) 199, 629
CseI GACGC 4 cut(s) 154, 163, 1600, 2093
Csp6I GTAC 7 cut(s) 275, 446, 540, 1547, 2063, 2169, 2337
CviQI GTAC 7 cut(s) 275, 446, 540, 1547, 2063, 2169, 2337
DraI TTTAAA 1 cut(s) 1101
DrdI GACNNNNNNGTC 2 cut(s) 164, 1874
DseDI GACNNNNNNGTC 2 cut(s) 164, 1874
EaeI YGGCCR 2 cut(s) 66, 2322
Eam1104I CTCTTC 6 cut(s) 326, 1002, 1086, 1281, 1839, 2404
EarI CTCTTC 6 cut(s) 326, 1002, 1086, 1281, 1839, 2404
EciI GGCGGA 1 cut(s) 872
Eco130I CCWWGG 3 cut(s) 1719, 1870, 1975
Eco31I GGTCTC 1 cut(s) 31
Eco32I GATATC 1 cut(s) 1816
Eco47I GGWCC 1 cut(s) 629
Eco57I CTGAAG 8 cut(s) 456, 456, 462, 963, 1110, 1148, 1692, 2220
Eco88I CYCGRG 1 cut(s) 1383
EcoRII CCWGG 3 cut(s) 160, 195, 213
EcoRV GATATC 1 cut(s) 1816
EcoT14I CCWWGG 3 cut(s) 1719, 1870, 1975
EcoT22I ATGCAT 1 cut(s) 505
ErhI CCWWGG 3 cut(s) 1719, 1870, 1975
Esp3I CGTCTC 2 cut(s) 1453, 1929
FalI AAGNNNNNCTT 3 cut(s) 1871, 1903, 2682
FaqI GGGAC 2 cut(s) 409, 519
FauI CCCGC 2 cut(s) 107, 209
FauNDI CATATG 1 cut(s) 499
FbaI TGATCA 3 cut(s) 805, 2503, 2677
FblI GTMKAC 1 cut(s) 510
FokI GGATG 8 cut(s) 212, 254, 349, 424, 1016, 1726, 2518, 2681
FspBI CTAG 4 cut(s) 1227, 1268, 1421, 1776
FspI TGCGCA 1 cut(s) 725
GlaI GCGC 2 cut(s) 433, 725
GsaI CCCAGC 2 cut(s) 142, 2218
GsuI CTGGAG 4 cut(s) 27, 131, 854, 1616
HaeII RGCGCY 1 cut(s) 435
HaeIII GGCC 3 cut(s) 68, 200, 2324
HapII CCGG 2 cut(s) 2406, 2459
HgaI GACGC 4 cut(s) 154, 163, 1600, 2093
HhaI GCGC 2 cut(s) 434, 726
Hin1I GRCGYC 2 cut(s) 165, 174
Hin6I GCGC 2 cut(s) 432, 724
HinP1I GCGC 2 cut(s) 432, 724
HincII GTYRAC 4 cut(s) 234, 420, 1296, 1835
HindII GTYRAC 4 cut(s) 234, 420, 1296, 1835
HindIII AAGCTT 1 cut(s) 1160
HinfI GANTC 9 cut(s) 290, 733, 1169, 1292, 1980, 2409, 2537, 2609, 2693
HpaII CCGG 2 cut(s) 2406, 2459
HphI GGTGA 6 cut(s) 103, 172, 459, 2394, 2648, 2669
Hpy166II GTNNAC 9 cut(s) 96, 234, 268, 420, 511, 1296, 1554, 1835, 2423
Hpy8I GTNNAC 9 cut(s) 96, 234, 268, 420, 511, 1296, 1554, 1835, 2423
Hpy99I CGWCG 1 cut(s) 122
HpyCH4III ACNGT 8 cut(s) 265, 528, 666, 999, 1551, 1572, 1811, 2475
HpyCH4IV ACGT 5 cut(s) 277, 448, 826, 1659, 2061
HpyF10VI GCNNNNNNNGC 5 cut(s) 171, 216, 980, 1591, 1730
HpySE526I ACGT 5 cut(s) 277, 448, 826, 1659, 2061
Hsp92I GRCGYC 2 cut(s) 165, 174
HspAI GCGC 2 cut(s) 432, 724
Kpn2I TCCGGA 1 cut(s) 2458
Ksp22I TGATCA 3 cut(s) 805, 2503, 2677
LguI GCTCTTC 1 cut(s) 1002
LmnI GCTCC 3 cut(s) 850, 1360, 2461
LweI GCATC 6 cut(s) 983, 1108, 2341, 2540, 2575, 2650
MaeI CTAG 4 cut(s) 1227, 1268, 1421, 1776
MaeII ACGT 5 cut(s) 277, 448, 826, 1659, 2061
MaeIII GTNAC 8 cut(s) 580, 706, 1660, 1706, 1768, 1792, 2017, 2105
MfeI CAATTG 1 cut(s) 711
MflI RGATCY 1 cut(s) 1444
MhlI GDGCHC 3 cut(s) 98, 389, 1018
MlyI GAGTC 3 cut(s) 727, 1301, 2531
MmeI TCCRAC 2 cut(s) 981, 2559
Mph1103I ATGCAT 1 cut(s) 505
MroI TCCGGA 1 cut(s) 2458
MseI TTAA 7 cut(s) 405, 600, 840, 906, 1100, 1155, 2465
MslI CAYNNNNRTG 2 cut(s) 367, 1809
MspI CCGG 2 cut(s) 2406, 2459
MspR9I CCNGG 4 cut(s) 162, 197, 215, 2406
MunI CAATTG 1 cut(s) 711
Mva1269I GAATGC 1 cut(s) 503
MvaI CCWGG 3 cut(s) 162, 197, 215
MwoI GCNNNNNNNGC 5 cut(s) 171, 216, 980, 1591, 1730
NciI CCSGG 1 cut(s) 2406
NdeI CATATG 1 cut(s) 499
NlaIV GGNNCC 2 cut(s) 1885, 2085
NmeAIII GCCGAG 1 cut(s) 2350
NmuCI GTSAC 4 cut(s) 580, 1792, 2017, 2105
NsbI TGCGCA 1 cut(s) 725
NsiI ATGCAT 1 cut(s) 505
NspI RCATGY 4 cut(s) 893, 1188, 1958, 2429
NspV TTCGAA 1 cut(s) 652
PaeI GCATGC 1 cut(s) 893
PaeR7I CTCGAG 1 cut(s) 1383
PagI TCATGA 1 cut(s) 754
PciI ACATGT 1 cut(s) 1184
PciSI GCTCTTC 1 cut(s) 1002
PcsI WCGNNNNNNNCGW 1 cut(s) 162
PctI GAATGC 1 cut(s) 503
PfeI GAWTC 6 cut(s) 290, 1169, 1980, 2409, 2609, 2693
PleI GAGTC 3 cut(s) 727, 1300, 2531
PpsI GAGTC 3 cut(s) 727, 1300, 2531
PscI ACATGT 1 cut(s) 1184
PshBI ATTAAT 1 cut(s) 1155
Psp6I CCWGG 3 cut(s) 160, 195, 213
PspFI CCCAGC 2 cut(s) 138, 2214
PspGI CCWGG 3 cut(s) 160, 195, 213
PspN4I GGNNCC 2 cut(s) 1885, 2085
PspPI GGNCC 2 cut(s) 199, 629
PstI CTGCAG 1 cut(s) 1048
PstNI CAGNNNCTG 2 cut(s) 1088, 2546
PsuI RGATCY 1 cut(s) 1444
RsaI GTAC 7 cut(s) 276, 447, 541, 1548, 2064, 2170, 2338
RsaNI GTAC 7 cut(s) 275, 446, 540, 1547, 2063, 2169, 2337
RseI CAYNNNNRTG 2 cut(s) 367, 1809
SapI GCTCTTC 1 cut(s) 1002
SaqAI TTAA 7 cut(s) 405, 600, 840, 906, 1100, 1155, 2465
Sau96I GGNCC 2 cut(s) 199, 629
ScaI AGTACT 1 cut(s) 2338
SchI GAGTC 3 cut(s) 727, 1301, 2531
ScrFI CCNGG 4 cut(s) 162, 197, 215, 2406
SduI GDGCHC 3 cut(s) 98, 389, 1018
SfaNI GCATC 6 cut(s) 983, 1108, 2341, 2540, 2575, 2650
SfcI CTRYAG 2 cut(s) 978, 1044
Sfr274I CTCGAG 1 cut(s) 1383
SfuI TTCGAA 1 cut(s) 652
SinI GGWCC 1 cut(s) 629
SlaI CTCGAG 1 cut(s) 1383
SmiMI CAYNNNNRTG 2 cut(s) 367, 1809
SmlI CTYRAG 4 cut(s) 989, 1204, 1364, 1383
SmoI CTYRAG 4 cut(s) 989, 1204, 1364, 1383
SphI GCATGC 1 cut(s) 893
SsiI CCGC 8 cut(s) 65, 100, 183, 202, 239, 299, 857, 2595
SspI AATATT 1 cut(s) 1999
SspMI CTAG 4 cut(s) 1227, 1268, 1421, 1776
StyD4I CCNGG 4 cut(s) 160, 195, 213, 2404
StyI CCWWGG 3 cut(s) 1719, 1870, 1975
TaaI ACNGT 8 cut(s) 265, 528, 666, 999, 1551, 1572, 1811, 2475
TaiI ACGT 5 cut(s) 280, 451, 829, 1662, 2064
TaqI TCGA 6 cut(s) 259, 293, 652, 897, 1309, 1384
TaqII GACCGA 1 cut(s) 1811
TatI WGTACW 3 cut(s) 539, 1546, 2336
TauI GCSGC 1 cut(s) 68
TfiI GAWTC 6 cut(s) 290, 1169, 1980, 2409, 2609, 2693
Tru1I TTAA 7 cut(s) 405, 600, 840, 906, 1100, 1155, 2465
Tru9I TTAA 7 cut(s) 405, 600, 840, 906, 1100, 1155, 2465
TscAI CASTG 7 cut(s) 98, 531, 589, 726, 820, 1071, 2632
TseFI GTSAC 4 cut(s) 580, 1792, 2017, 2105
Tsp45I GTSAC 4 cut(s) 580, 1792, 2017, 2105
TspGWI ACGGA 3 cut(s) 106, 355, 689
TspRI CASTG 7 cut(s) 98, 531, 589, 726, 820, 1071, 2632
VneI GTGCAC 1 cut(s) 94
VpaK11BI GGWCC 1 cut(s) 629
VspI ATTAAT 1 cut(s) 1155
XapI RAATTY 2 cut(s) 1107, 1853
XceI RCATGY 4 cut(s) 893, 1188, 1958, 2429
XcmI CCANNNNNNNNNTGG 1 cut(s) 2317
XhoI CTCGAG 1 cut(s) 1383
XmiI GTMKAC 1 cut(s) 510
XspI CTAG 4 cut(s) 1227, 1268, 1421, 1776
ZrmI AGTACT 1 cut(s) 2338
Zsp2I ATGCAT 1 cut(s) 505
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.